HHsearch alignment for GI: 254781066 and conserved domain: KOG0556
>KOG0556 consensus.
Probab=100.00 E-value=0 Score=414.98 Aligned_cols=297 Identities=19% Similarity=0.298 Sum_probs=235.8
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCCEECC-CCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999879889847821056-8985445412410247886783200002858999989874468899
Q gi|254781066|r 20 PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIF 98 (355)
Q Consensus 20 ~~l~~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~-~~g~~~~~~f~t~~~~~~~~~~~~yL~~SPql~lK~ll~~G~~rvy 98 (355)
T Consensus 226 AiFriq~gvc~~FRe~L~~kgF~EIhTpKli~asSEG--GanvF~v~-----Yfk~~A~LAQSPQLyKQMaI~gdf~rVy 298 (533)
T KOG0556 226 AIFRIQAGVCFAFREYLRSKGFVEIHTPKLIGASSEG--GANVFRVS-----YFKQKAYLAQSPQLYKQMAICGDFERVY 298 (533)
T ss_pred HEEEHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCC--CCEEEEEE-----ECCCCCHHHCCHHHHHHHHHHCCHHHEE
T ss_conf 1000688899999999975686043263201466777--72268998-----6067503205858887788760611046
Q ss_pred HHHHHHCCCCCCC-CCCCCEEEECEEECCC-CHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHH-
Q ss_conf 9886424567775-4484300200011577-657877755788877666418830002234332467732078888656-
Q gi|254781066|r 99 CFAHAWRNGEQGC-LHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA- 175 (355)
Q Consensus 99 qig~~FRaE~~~~-rHlpEFtmLE~e~af~-d~~dlm~~~E~li~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~- 175 (355)
T Consensus 299 eIGpVfRAEdSnthRhltEFvGLD~EMaf~~hYhEVm~~i~~lfv~IF~~l~ery~~E----------------ie~Vr~ 362 (533)
T KOG0556 299 EIGPVFRAEDSNTHRHLTEFVGLDLEMAFNEHYHEVMDTIGELFVFIFKGLRERYAKE----------------IETVRK 362 (533)
T ss_pred EECCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHH
T ss_conf 5235566044641666677617422547777799999999999999998788888999----------------999861
Q ss_pred HHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCEECCCCCCCCCCCCCCCCHHHHHHC-CCCCC
Q ss_conf 66087653234555623279999999976887787653478987664300362237675443257688886413-67877
Q gi|254781066|r 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254 (355)
Q Consensus 176 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ie~~l~~~~pvfi~~yP~~~~pla-k~~~~ 254 (355)
T Consensus 363 qyp~e~f-kf~~~~lrl~~~e~v~mLreaGvE~g~~dDlsTe~Ek~LG~lV~eky~td-fyildkyP~avRPFYTmpd~~ 440 (533)
T KOG0556 363 QYPFEPF-KFLEPPLRLTFKEGVAMLREAGVEMGDEDDLSTESEKKLGQLVREKYDTD-FYILDKYPLAVRPFYTMPDPE 440 (533)
T ss_pred CCCCCCC-CCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-EEEECCCCCCCCCCCCCCCCC
T ss_conf 0888633-35787557655889999997286358722358865889999999871784-799714754446643367888
Q ss_pred CCCCCCCCEEEECCEECCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH-CCCCCCCEEECCHHHHHHHH
Q ss_conf 83633022022367122564021069999999999999999728885301018999986-18896324531599998998
Q gi|254781066|r 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLV 333 (355)
Q Consensus 255 ~~~va~rfdl~i~G~El~ng~~El~d~~~q~~rf~~q~~~k~~~~~e~~~~D~~fl~al-~G~PPhgG~glGidRLvm~l 333 (355)
T Consensus 441 ~p~ySnSyD~fmRGeEIlSGAQRIhdpe~L~era------~~hGid~-~~i-~~YidsFryG~PPHaGgGIGLERvvmly 512 (533)
T KOG0556 441 NPRYSNSYDFFMRGEEILSGAQRIHDPELLVERA------KEHGIDP-SKI-STYIDSFRYGAPPHAGGGIGLERVVMLY 512 (533)
T ss_pred CCCCCCCHHHEECHHHHHCCCCCCCCHHHHHHHH------HHCCCCH-HHH-HHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf 8773441432234666634430037889999999------9739887-899-9888874058998778751599999998
Q ss_pred HCCCCHHHHCCCCCCC
Q ss_conf 1559713111585648
Q gi|254781066|r 334 TGANNINEVIWTPFSQ 349 (355)
Q Consensus 334 ~g~~~Irdvi~FP~~r 349 (355)
T Consensus 513 l~L~nIR~~SlFPRDP 528 (533)
T KOG0556 513 LGLNNIRKTSLFPRDP 528 (533)
T ss_pred HCCCCCHHHCCCCCCC
T ss_conf 1677500102578882