HHsearch alignment for GI: 254781066 and conserved domain: PRK00413
>PRK00413 thrS threonyl-tRNA synthetase; Reviewed.
Probab=98.04 E-value=4.3e-05 Score=49.61 Aligned_cols=130 Identities=15% Similarity=0.207 Sum_probs=79.4
Q ss_pred CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEECCC----CCCCCCCCEEEECCCCCCC-CCCCCCC
Q ss_conf 9874788312615489999999999999999998798898478210568----9854454124102478867-8320000
Q gi|254781066|r 5 PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP----GNETHIRAFSTELIIQDHI-RKPLYLQ 79 (355)
Q Consensus 5 p~~~~~~~~~~~r~R~~l~~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~~----~g~~~~~~f~t~~~~~~~~-~~~~yL~ 79 (355)
T Consensus 258 pGl~~w~P~G-------~~i~~~le~~~r~~~~~~Gy~eV~TP~i~~~~Lw~~SG--Hw~~Y~e~Mf~~~~~~~~~~~lK 328 (639)
T PRK00413 258 PGLPFWHPKG-------WIIRNELEDYMRRRHLKAGYQEVNTPHILDRSLWETSG--HWDHYRENMFPTMSDDGEDYALK 328 (639)
T ss_pred CCCEEECCCH-------HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCC--CHHHHCCCCCCCEECCCCEEEEC
T ss_conf 8764663768-------99999999999999998698598364134688996547--42232254223240152103204
Q ss_pred -----CCHHHHHHHHHHHHHH---HHHHHHHHHCCCCCCCC----CCCCEEEECEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf -----2858999989874468---89998864245677754----484300200011577657877755788877666
Q gi|254781066|r 80 -----TSPEFSCKKLLAAGEE---KIFCFAHAWRNGEQGCL----HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145 (355)
Q Consensus 80 -----~SPql~lK~ll~~G~~---rvyqig~~FRaE~~~~r----HlpEFtmLE~e~af~d~~dlm~~~E~li~~~~~ 145 (355)
T Consensus 329 PMNCP~H~~if~-~~~~SYRdLPlR~aEfg~~~R~E~SG~L~GL~RvR~FtqdDaH-IFc~~dQi~~Ei~~~l~~~~~ 404 (639)
T PRK00413 329 PMNCPGHILIFK-SGLRSYRELPLRLAEFGTVHRYEKSGALHGLMRVRGFTQDDAH-IFCTPEQIKDELLSVLDLILS 404 (639)
T ss_pred CCCCCCHHHHHH-CCCCCHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCE-EECCHHHHHHHHHHHHHHHHH
T ss_conf 668700335644-3553555475566641132056778744564233000015841-324789999999999999999