HHsearch alignment for GI: 254781066 and conserved domain: PRK03991

Probab=97.84  E-value=3.8e-05  Score=49.94  Aligned_cols=123  Identities=13%  Similarity=0.167  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEECCCEECC--CCCCCCCCCEEEECCCCCCCCCCCCCCCC--H---HHHHHHHHHHHHH
Q ss_conf             999999999999999879889847821056--89854454124102478867832000028--5---8999989874468
Q gi|254781066|r   23 LKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTELIIQDHIRKPLYLQTS--P---EFSCKKLLAAGEE   95 (355)
Q Consensus        23 ~~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~--~~g~~~~~~f~t~~~~~~~~~~~~yL~~S--P---ql~lK~ll~~G~~   95 (355)
T Consensus       228 ~i~~lle~Yv~~~~~~~G~~eV~TP~m~d~~~~~~sgH~~~f~e~my~~~~d~~~~~LrpmnCpgh~~i~~-~~~~SYRd  306 (613)
T PRK03991        228 LMKDLLEDYVYNLVKELGAMPVETPNMYDLSHPAIREHADKFGERQYRVKSDKKDLMLRFAACFGQFAMLK-DMTISYKN  306 (613)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEECCCEEECCCCHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCEEEEC-CCCCCHHH
T ss_conf             99999999999999863966845761640554025568876111342563276332304457863123510-24457432


Q ss_pred             ---HHHHHHHH-HCCCCCCC----CCCCCEEEECEEECCC-CHHHHHHHHHHHHHHHHHHH
Q ss_conf             ---89998864-24567775----4484300200011577-65787775578887766641
Q gi|254781066|r   96 ---KIFCFAHA-WRNGEQGC----LHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVA  147 (355)
Q Consensus        96 ---rvyqig~~-FRaE~~~~----rHlpEFtmLE~e~af~-d~~dlm~~~E~li~~~~~~~  147 (355)
T Consensus       307 LPlRl~E~g~~syR~E~SG~L~GL~RVR~FTqdDaH-IFC~~~dQi~~E~~~~~~li~~v~  366 (613)
T PRK03991        307 LPLKMYELSDYSFRLEQRGELVGLKRLRAFTMPDMH-TLCKDMDEAMEEFEKQHKLILETG  366 (613)
T ss_pred             CCHHHHHHCCCEEECCCCCCEECEEEEECCCCCCCE-ECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             646776522420212567744440133235668611-316877899999999999999999