HHsearch alignment for GI: 254781066 and conserved domain: PRK04483

>PRK04483 threonyl-tRNA synthetase; Validated.
Probab=98.07  E-value=2.5e-05  Score=51.05  Aligned_cols=133  Identities=11%  Similarity=0.154  Sum_probs=78.8

Q ss_pred             CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEECCC----CCCCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf             9874788312615489999999999999999998798898478210568----985445412410247886783200002
Q gi|254781066|r    5 PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP----GNETHIRAFSTELIIQDHIRKPLYLQT   80 (355)
Q Consensus         5 p~~~~~~~~~~~r~R~~l~~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~~----~g~~~~~~f~t~~~~~~~~~~~~yL~~   80 (355)
T Consensus       261 pG~~~wlP~G-------~~i~~~le~~~r~~~~~~Gy~eV~tP~i~~~~Lw~~SG--H~~~Y~e~Mf~~~~~~~~~~lKP  331 (634)
T PRK04483        261 PGLVFWHPKG-------WSLWQVVEQYMRKVYRDSGYGEVRCPQILDVSLWQKSG--HWDNYQDAMFFTESEKRTYAVKP  331 (634)
T ss_pred             CCCEEECCCH-------HHHHHHHHHHHHHHHHHCCCEEEECCEECCHHHHHHCC--CHHHHHHCCCEECCCCCEEEECC
T ss_conf             8643881668-------99999999999999998299599886251377876256--16455303713425540355157


Q ss_pred             -----CHHHHHHHHHHHHHH---HHHHHHHHHCCCCCCCC----CCCCEEEECEEECCCCHHHHHHHHHHHHH---HHHH
Q ss_conf             -----858999989874468---89998864245677754----48430020001157765787775578887---7666
Q gi|254781066|r   81 -----SPEFSCKKLLAAGEE---KIFCFAHAWRNGEQGCL----HQPEFTMLEWYRAHESYEQLMKDCMNIIR---CAAE  145 (355)
Q Consensus        81 -----SPql~lK~ll~~G~~---rvyqig~~FRaE~~~~r----HlpEFtmLE~e~af~d~~dlm~~~E~li~---~~~~  145 (355)
T Consensus       332 MNCP~H~~if~-~~~rSYRdLPlR~aE~g~~~R~E~SG~L~GL~RvR~FtqdDaH-IFc~~dQi~~Ei~~~l~~~~~vy~  409 (634)
T PRK04483        332 MNCPGHVQVFN-QGLHSYRDLPIRYGEFGACHRNEPSGALHGILRVRGFTQDDGH-VFCLESQIEAEVTAFHQQALAVYT  409 (634)
T ss_pred             CCCHHHHHHHH-CCCCCHHHCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCE-EECCHHHHHHHHHHHHHHHHHHHH
T ss_conf             68564879987-1774444343665543302205677654574568899889833-563899999999999999999998


Q ss_pred             HHC
Q ss_conf             418
Q gi|254781066|r  146 VAN  148 (355)
Q Consensus       146 ~~~  148 (355)
T Consensus       410 ~fG  412 (634)
T PRK04483        410 AFG  412 (634)
T ss_pred             HCC
T ss_conf             639