HHsearch alignment for GI: 254781066 and conserved domain: PRK05425
>PRK05425 asparagine synthetase AsnA; Provisional.
Probab=98.51 E-value=1.5e-05 Score=52.36 Aligned_cols=267 Identities=14% Similarity=0.145 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHH-----HCCCEEEECCCEECC-CCCCCCC----CCEEEECCCCCCCCCCCCCCCCHHHHHHHH-H
Q ss_conf 9999999999999999-----879889847821056-8985445----412410247886783200002858999989-8
Q gi|254781066|r 22 LLKRNMIQSSLREYFV-----ENQFIEIDSMSLQYS-PGNETHI----RAFSTELIIQDHIRKPLYLQTSPEFSCKKL-L 90 (355)
Q Consensus 22 l~~Rs~i~~~iR~ff~-----~~gF~EV~TPiL~~~-~~g~~~~----~~f~t~~~~~~~~~~~~yL~~SPql~lK~l-l 90 (355)
T Consensus 8 ~~etq~aI~~iK~~F~~~L~~~LnL~rVsAPLfv~~~sGlNDnLnG~ErpV~F~--vk~~~~~~~EiVhSLAKW-KR~aL 84 (327)
T PRK05425 8 FIETQQAISFVKNFFERQLAKKLNLIRVSAPLFVRVGSGLNDNLNGVEKPVSFK--VKDLPDATFEVVHSLAKW-KRLAL 84 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEECCCCCCCCCCCCEEEEEEEE--CCCCCCCEEEEEEEHHHH-HHHHH
T ss_conf 999999999999999999999709079557858737888667777726336986--568888706886106889-99999
Q ss_pred H-HHHH---HHHHHHHHHC-CCCCCCCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHHCCC---E-ECCCCCCCCC
Q ss_conf 7-4468---8999886424-567775448430020001157765787775578887766641883---0-0022343324
Q gi|254781066|r 91 A-AGEE---KIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK---I-FSFQNVNCNP 161 (355)
Q Consensus 91 ~-~G~~---rvyqig~~FR-aE~~~~rHlpEFtmLE~e~af~d~~dlm~~~E~li~~~~~~~~~~---~-~~~~~~~~~~ 161 (355)
T Consensus 85 ~~y~f~~geGlyTdMnAiR~DE~ldn~HSiyVDQWDWEkvI~~edRnl~~LK~tV~~Iy~~ik~tE~~v~~~yp~~~-~L 163 (327)
T PRK05425 85 KRYGFSAGEGLYTDMNAIRPDEDLDNTHSVYVDQWDWEKVIDKEERNLDFLKETVNKIYKAIKATELAVSEKYPLAK-FL 163 (327)
T ss_pred HHCCCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CC
T ss_conf 96599989532016762546755687601898400364536853267899999999999999999999999686311-48
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCEECCCCCCCCCCCCCCC
Q ss_conf 67732078888656660876532345556232799999999768877876534789876643003622376754432576
Q gi|254781066|r 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241 (355)
Q Consensus 162 ~~~~~~i~~~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ie~~l~~~~pvfi~~y 241 (355)
T Consensus 164 p~~I~FitsqeL~~~YP~Ls-----------~keRE~~i~ke~-----------------------------gAVFl~~I 203 (327)
T PRK05425 164 PEKITFIHSQELEDRYPDLT-----------PKEREDAIAKEY-----------------------------GAVFLIGI 203 (327)
T ss_pred CCCCEEECHHHHHHHCCCCC-----------HHHHHHHHHHHH-----------------------------CCEEEEEC
T ss_conf 76116864899997675899-----------789999999983-----------------------------94999944
Q ss_pred CHHHHHHC--CCCC----CCCCCCCCCEEEE------CCEECCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 88886413--6787----7836330220223------6712256402106999999999999999972888530101899
Q gi|254781066|r 242 PAPESALA--NIYP----ADPRFTKRFELYA------CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309 (355)
Q Consensus 242 P~~~~pla--k~~~----~~~~va~rfdl~i------~G~El~ng~~El~d~~~q~~rf~~q~~~k~~~~~e~~~~D~~f 309 (355)
T Consensus 204 G~---~L~~g~~Hd~RApDYDDW~LNGDilvw~~vl~~a~ElSSMGIRVd-----~~sL~~QL~~~~~~dr~~l~----~ 271 (327)
T PRK05425 204 GG---KLSDGKPHDGRAPDYDDWGLNGDILVWNPVLDRAFELSSMGIRVD-----EEALKKQLKLTGDEDRLELE----W 271 (327)
T ss_pred CC---CCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCEEEEECCEEEEC-----HHHHHHHHHHCCCHHHHCCH----H
T ss_conf 88---689989677779998676667549996023073246623547888-----99999999973973543498----9
Q ss_pred HHHH-CC-CCCCCEEECCHHHHHHHHHCCCCHHHHCC
Q ss_conf 9986-18-89632453159999899815597131115
Q gi|254781066|r 310 LACL-TE-MPQSSGIAMGFDRLVMLVTGANNINEVIW 344 (355)
Q Consensus 310 l~al-~G-~PPhgG~glGidRLvm~l~g~~~Irdvi~ 344 (355)
T Consensus 272 H~~ll~~~LP~TIGGGIGQSRlcM~lL~KaHIGEVQ~ 308 (327)
T PRK05425 272 HQALLNGELPLTIGGGIGQSRLCMLLLRKAHIGEVQA 308 (327)
T ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEE
T ss_conf 9999749998431276239999999973252211576