HHsearch alignment for GI: 254781066 and conserved domain: PRK12325
>PRK12325 prolyl-tRNA synthetase; Provisional.
Probab=99.07 E-value=2.1e-09 Score=75.11 Aligned_cols=118 Identities=15% Similarity=0.192 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCEECCC----CCCCCCCCEEEECCC-CCCCCCCCCCCC-CH----HHHHHHHHH
Q ss_conf 99999999999999998798898478210568----985445412410247-886783200002-85----899998987
Q gi|254781066|r 22 LLKRNMIQSSLREYFVENQFIEIDSMSLQYSP----GNETHIRAFSTELII-QDHIRKPLYLQT-SP----EFSCKKLLA 91 (355)
Q Consensus 22 l~~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~~----~g~~~~~~f~t~~~~-~~~~~~~~yL~~-SP----ql~lK~ll~ 91 (355)
T Consensus 47 ~~i~~~le~~ir~e~~~~G~~eV~tP~l~~~~Lw~~SG--h~~~y~~~mf~~~d~~~~~~~l~Pmnc~~~~~i~-~~~~~ 123 (438)
T PRK12325 47 LKVLKKIENIVREEQNRAGAIEILMPTIQPADLWRESG--RYDAYGKEMLRIKDRHDREMLYGPTNEEMITDIF-RSYVK 123 (438)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHC--CHHHHHHHHCEEECCCCCEECCCCCCCHHHHHHH-HHCCC
T ss_conf 99999999999999997499799877658778998628--7645557421213477774313899849999999-74034
Q ss_pred HHHH---HHHHHHHHHCCCCCCC---CCCCCEEEECEEECCCCHHHHHHHHHHHHHH
Q ss_conf 4468---8999886424567775---4484300200011577657877755788877
Q gi|254781066|r 92 AGEE---KIFCFAHAWRNGEQGC---LHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142 (355)
Q Consensus 92 ~G~~---rvyqig~~FRaE~~~~---rHlpEFtmLE~e~af~d~~dlm~~~E~li~~ 142 (355)
T Consensus 124 SYRdLPlrl~q~g~~~R~E~sp~~GLlRvReF~m~Dah~F~~~~e~~~~~~~~v~~~ 180 (438)
T PRK12325 124 SYKDLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDLDEEGARKSYNRMFVA 180 (438)
T ss_pred CHHHCCHHHHHHHHEECCCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHHHHH
T ss_conf 265425788764440112026764410122333041543246889999999999999