HHsearch alignment for GI: 254781066 and conserved domain: PRK12444

Probab=98.00  E-value=8.8e-05  Score=47.76  Aligned_cols=130  Identities=16%  Similarity=0.186  Sum_probs=77.2

Q ss_pred             CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEECCC----CCCCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf             9874788312615489999999999999999998798898478210568----985445412410247886783200002
Q gi|254781066|r    5 PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP----GNETHIRAFSTELIIQDHIRKPLYLQT   80 (355)
Q Consensus         5 p~~~~~~~~~~~r~R~~l~~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~~----~g~~~~~~f~t~~~~~~~~~~~~yL~~   80 (355)
T Consensus       264 pG~~fwlP~-------G~~i~~~le~~~r~~~~~~GY~eV~TP~i~~~~Lw~~SG--H~~~Y~e~Mf~~~~d~~~~~lKP  334 (639)
T PRK12444        264 PGMPFYLPK-------GQIIRNELEAFLREIQKEYNYQEVRTPFMMNQELWERSG--HWGHYKDNMYFSEVDNKSFALKP  334 (639)
T ss_pred             CCCEEEECC-------HHHHHHHHHHHHHHHHHHCCCEEECCCEEEHHHHHHHCC--HHHHHHHCCCCCCCCCCEEECCC
T ss_conf             974478467-------869999999999999998398782286662156876166--04333302755454540331267


Q ss_pred             -----CHHHHHHHHHHHHHH---HHHHHHHHHCCCCCCCC----CCCCEEEECEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf             -----858999989874468---89998864245677754----484300200011577657877755788877666
Q gi|254781066|r   81 -----SPEFSCKKLLAAGEE---KIFCFAHAWRNGEQGCL----HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE  145 (355)
Q Consensus        81 -----SPql~lK~ll~~G~~---rvyqig~~FRaE~~~~r----HlpEFtmLE~e~af~d~~dlm~~~E~li~~~~~  145 (355)
T Consensus       335 MNCP~H~~if~-~~~rSYRdLPlR~aEfg~vhR~E~SG~L~GL~RVR~FtqDDAH-IFct~dQi~~Ei~~~~~~~~~  409 (639)
T PRK12444        335 MNCPGHMLMFK-NKLHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAH-LFVTPEQIEDEIKSVMAQIDY  409 (639)
T ss_pred             CCCHHHHHHHH-CCCCCHHHCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCE-EECCHHHHHHHHHHHHHHHHH
T ss_conf             68588999986-0562144365222433646337787664576778899879824-653889999999999999999