HHsearch alignment for GI: 254781066 and conserved domain: PRK12820
>PRK12820 bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA amidotransferase subunit C; Provisional.
Probab=100.00 E-value=0 Score=555.49 Aligned_cols=315 Identities=22% Similarity=0.243 Sum_probs=226.7
Q ss_pred HHHCCCHHH----------HHHHHHHHHHHHHHHHHHCCCEEEECCCEE-CCCCCCCCCCCEEEECCCCCCCCCCCC-CC
Q ss_conf 312615489----------999999999999999998798898478210-568985445412410247886783200-00
Q gi|254781066|r 12 RDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY-LQ 79 (355)
Q Consensus 12 ~~~~~r~R~----------~l~~Rs~i~~~iR~ff~~~gF~EV~TPiL~-~~~~g~~~~~~f~t~~~~~~~~~~~~y-L~ 79 (355)
T Consensus 136 ee~RLkyRyLDLRr~~~~~~~~~Rskv~~~iR~~l~~~gF~EVETP~L~~stpEG---ArdflvPsr~~---~~~fyaLp 209 (706)
T PRK12820 136 EDLRLQYRYLDIRRPAMQDHLAKRHRIIKCARDFLDSRGFLEIETPILTKSTPEG---ARDYLVPSRIH---PKEFYALP 209 (706)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCCCCC---CCCCCCCEECC---CCCEECCC
T ss_conf 8887665677647998999999999999999999987798896687044567532---45750024458---87650056
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
Q ss_conf 28589999898744688999886424567775448430020001157765787775578887766641883000223433
Q gi|254781066|r 80 TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159 (355)
Q Consensus 80 ~SPql~lK~ll~~G~~rvyqig~~FRaE~~~~rHlpEFtmLE~e~af~d~~dlm~~~E~li~~~~~~~~~~~~~~~~~~~ 159 (355)
T Consensus 210 QSPQlyKQlLMvgG~dRyFqIarcFRdEd~r~dRqPEFTqlDiEmSF~d~edvm~l~E~li~~~~~~~~----------~ 279 (706)
T PRK12820 210 QSPQLFKQLLMIAGFERYFQLARCFRDEDLRPNRQPEFTQLDIEASFIDEEFIFELIEELTARMFAIGG----------I 279 (706)
T ss_pred CCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHCC----------C
T ss_conf 682999999986286617996001128999988798340687421348999999999999999998538----------4
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCC--------CCCCCCCCHHH--------------------------------HHH
Q ss_conf 24677320788886566608765323--------45556232799--------------------------------999
Q gi|254781066|r 160 NPFSEPEYITVAEAFARYANIDLGTT--------LDNPDQPDRHL--------------------------------LYL 199 (355)
Q Consensus 160 ~~~~~~~~i~~~e~~~~~~~~d~~~~--------~~~~~~~~~~~--------------------------------~~~ 199 (355)
T Consensus 280 ~l~~pFprmtY~eAm~~YGsDKPDlRf~lel~d~t~if~~~~f~vF~~~l~~gg~Vk~I~v~~~~~~~s~~~i~~e~~~e 359 (706)
T PRK12820 280 ALPRPFPRMPYAEAMDTTGSDRPDLRFDLKFADATDIFENTRYGIFKQILQRGGRIKGINIKGQSEKLSKNVLQNEYAKE 359 (706)
T ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCHHHCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 54687453419999998689874310230102330122155405899988508868899768835665666656699998
Q ss_pred HHHHCCCCCCCCCCH------------HH-----HHHHHH------------------------------------HCEE
Q ss_conf 999768877876534------------78-----987664------------------------------------3003
Q gi|254781066|r 200 QAQQAGIRVAHDDTW------------SD-----IFSRIL------------------------------------IEKI 226 (355)
Q Consensus 200 ~~~~~~~~~~~~~~~------------~~-----~~~~l~------------------------------------~~~i 226 (355)
T Consensus 360 ia~~~gak---Gl~w~k~~~~~l~~~i~kf~see~~~~l~~~~~~~~GD~i~~~ad~~~~~v~~~LG~lR~~la~~l~Li 436 (706)
T PRK12820 360 IAPSFGAK---GMTWMRAEAGGLDSNIVQFFSADEKEALKRRFHAEDGDVIIMIADASCAIVLSALGQLRLHLADRLGLI 436 (706)
T ss_pred HHHHCCCC---CCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 62430656---625898616864631443079999999999848788988999727506689988626789999984887
Q ss_pred CCCCCCCCCCCCCCCC-----------HHHHHHCCCCCCC--CC--------CCCCCEEEECCEECCCCCHHCCCHHHHH
Q ss_conf 6223767544325768-----------8886413678778--36--------3302202236712256402106999999
Q gi|254781066|r 227 EPNLGINCCTILDRYP-----------APESALANIYPAD--PR--------FTKRFELYACNIELCNACDELLDPIEQR 285 (355)
Q Consensus 227 e~~l~~~~pvfi~~yP-----------~~~~plak~~~~~--~~--------va~rfdl~i~G~El~ng~~El~d~~~q~ 285 (355)
T Consensus 437 ~~~~--~~flWVtDFPLFE~~ee~~~~s~HHPFT~P~~ed~d~~~~~~~~~v~a~aYDLVlNG~ElggGSiRIHd~~iQ~ 514 (706)
T PRK12820 437 PEGV--FHPLWITDFPLFEATDDGGVTSSHHPFTAPDREDFDPGDIEELLDLRSRAYDLVVNGEELGGGSIRINDKDIQL 514 (706)
T ss_pred CCCC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECCEEEEEEEEECCCHHHHH
T ss_conf 8786--31688516742234544465335489778882336832245532000364606899999614022038999999
Q ss_pred HHHHHHHHHHHCCCCCC-C-HHHHHHHHHH-CCCCCCCEEECCHHHHHHHHHCCCCHHHHCCCCCCCCCCC
Q ss_conf 99999999997288853-0-1018999986-1889632453159999899815597131115856487433
Q gi|254781066|r 286 HRFEKEMQEKKKIYNET-Y-PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353 (355)
Q Consensus 286 ~rf~~q~~~k~~~~~e~-~-~~D~~fl~al-~G~PPhgG~glGidRLvm~l~g~~~Irdvi~FP~~r~~~~ 353 (355)
T Consensus 515 ~if~~------lGl~~ee~~~kFgf~LeAf~YGaPPHGGialGlDRLvMlLtg~~sIRDVIaFPKt~~g~d 579 (706)
T PRK12820 515 RIFAA------LGLSEEDIEDKFGFFLRAFDFAAPPHGGIALGLDRVVSMILQTPSIREVIAFPKNRSAAC 579 (706)
T ss_pred HHHHH------CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCHHHEECCCCCCCCCC
T ss_conf 99997------599978988899999999866999867031039999999769982650522789988786