RPSBLAST alignment for GI: 254781066 and conserved domain: TIGR00462
>gnl|CDD|161889 TIGR00462, genX, lysyl-tRNA synthetase-like protein GenX. Many Gram-negative bacteria have a protein closely homologous to the C-terminal region of lysyl-tRNA synthetase (LysS). Multiple sequence alignment of these proteins with the homologous regions of collected LysS proteins shows that these proteins form a distinct set rather than just similar truncations of LysS. The protein is termed GenX after its designation in E. coli. Interestingly, genX often is located near a homolog of lysine-2,3-aminomutase. Its function is unknown. Length = 304
Score = 391 bits (1007), Expect = e-109
Identities = 128/325 (39%), Positives = 181/325 (55%), Gaps = 22/325 (6%)
Query: 22 LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
L R + +++R +F E +E+++ L +P + H+ AF+TE + D +PLYLQTS
Sbjct: 1 LRARARLLAAIRAFFAERGVLEVETPLLSPAPVTDPHLDAFATEFLGPDGEGRPLYLQTS 60
Query: 82 PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
PE++ K+LLAAG IF +RNGE+G H PEFTMLEWYR Y LM + +++
Sbjct: 61 PEYAMKRLLAAGSGPIFQICKVFRNGERGRRHNPEFTMLEWYRPGFDYHDLMDEVEALLQ 120
Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
+PF+ E ++ EAF RYA ID T L A
Sbjct: 121 ELLG--------------DPFAPWERLSYQEAFLRYAGIDPLTA-------SLDELAAAA 159
Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
G+R + +D D+ + EK+EP+LG T L YPA ++ALA I P DPR +R
Sbjct: 160 AAHGVRASEEDDRDDLLDLLFSEKVEPHLGFGRPTFLYDYPASQAALARISPDDPRVAER 219
Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSS 320
FELY +EL N EL D EQR RFE + E+K + YP+DE FLA L +P+ S
Sbjct: 220 FELYIKGLELANGFHELTDAAEQRRRFEADNAERKALGLPRYPLDERFLAALEAGLPECS 279
Query: 321 GIAMGFDRLVMLVTGANNINEVIWT 345
G+A+G DRL+ML GA++I++V+
Sbjct: 280 GVALGVDRLLMLALGADSIDDVLAF 304