RPSBLAST alignment of GI: 254781066 and protein with PDBid: 3a74
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A* Length = 493
Score = 210 bits (536), Expect = 3e-55
Identities = 105/342 (30%), Positives = 163/342 (47%), Gaps = 18/342 (5%)
Query: 11 NRDFHYRRRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
R P + R++I S+R Y + ++E+++ + G R F T
Sbjct: 159 QRYLDLIMNPESKKTFITRSLIIQSMRRYLDSHGYLEVETPMMHAVAG-GAAARPFITHH 217
Query: 67 IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
D LY++ + E K+L+ G EK++ +RN H PEFTMLE Y A+
Sbjct: 218 NALD---MTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMLELYEAY 274
Query: 127 ESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
+ +MK N+I A EV + + E + + +A Y +D
Sbjct: 275 ADFRDIMKLTENLIAHIATEVLGTTKIQYGEHLVDLTPEWRRLHMVDAIKEYVGVDF--- 331
Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
D L A++ G+ VA T+ I + +K+E L T + +P
Sbjct: 332 --WRQMSDEEAREL-AKEHGVEVAPHMTFGHIVNEFFEQKVEDKLI--QPTFIYGHPVEI 386
Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
S LA P DPRFT RFEL+ E NA EL DPI+QR RFE++++E+++ +E + +
Sbjct: 387 SPLAKKNPDDPRFTDRFELFIVGREHANAFTELNDPIDQRQRFEEQLKEREQGNDEAHEM 446
Query: 306 DEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
DEDFL L MP + G+ +G DRLVML+T + +I +V+ P
Sbjct: 447 DEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFP 488