RPSBLAST alignment of GI: 254781066 and protein with PDBid: 3nem
>3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A* Length = 438
Score = 116 bits (292), Expect = 7e-27
Identities = 58/340 (17%), Positives = 114/340 (33%), Gaps = 51/340 (15%)
Query: 17 RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL 76
R+ + ++R++F EN FIEI + + + E F + +
Sbjct: 132 EVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATAT-EGGTELFPM-----KYFEEDA 185
Query: 77 YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFT-MLEWYRAHESYEQLMK 134
+L SP+ + ++A+G ++++ A +R E H E + E E++M
Sbjct: 186 FLAQSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDSEMAFIEDEEEVMS 245
Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
++ A V + E + + L+ P P
Sbjct: 246 FLERLVAHA----------INYVREHNAKELDILNF--------------ELEEPKLPFP 281
Query: 195 HLLYLQA----QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
+ Y +A G + + R+L + + N L +YP+
Sbjct: 282 RVSYDKALEILGDLGKEIPWGEDIDTEGERLLGKYMMEN-ENAPLYFLYQYPSEAKPFYI 340
Query: 251 I-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
+ Y P + F+L +E+ + + +++ + E +
Sbjct: 341 MKYDNKPEICRAFDLEYRGVEISSGGQREHRHDILVEQIKEKGLNPES--------FEFY 392
Query: 310 LACLTE--MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
L MP G +G +RL+ + NI EVI F
Sbjct: 393 LKAF-RYGMPPHGGFGLGAERLIKQMLDLPNIREVI--LF 429