HHSEARCH alignment of GI: 254781067 and SCOP domain: d1bkba2

Alignment

Probab=97.19  E-value=0.00043  Score=43.07  Aligned_cols=56  Identities=18%  Similarity=0.233  Sum_probs=45.7

Q ss_pred             EECCCEEEEEEEECCEEEEEECCCCCCCCCCHHHHH-HHHHHCCCCCEEEEEEECCE
Q ss_conf             105640578996198899994688764321154300-13320137861568976677
Q gi|254781067|r   66 FVEDQRFQFLYQDQEGFHFMNPETYDQVTVSEEVIG-DQKVYFQEGMEVKLLIHEGV  121 (189)
Q Consensus        66 ~ie~~~~qylY~dg~~~~FMd~etyeqi~i~~~~ig-~~~~fL~eg~~v~i~~~~~~  121 (189)
                      .++++.+|.+-..|+..++||++|||.+++|.+.+. +...=|.+|.+|.-.-.-|+
T Consensus         1 iIeK~~aQVlsi~Gd~vq~MD~etyetfelpm~~~~ee~~~~l~~G~eVeywe~mGr   57 (65)
T d1bkba2           1 IIEKFTAQILSVSGDVIQLMDMRDYKTIEVPMKYVEEEAKGRLAPGAEVEVWQILDR   57 (65)
T ss_dssp             CCEEEEEEEEEECSSEEEEEETTTCCEEEEEGGGBCHHHHTTCCTTCEEEEEEETTE
T ss_pred             CCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCCCHHHHHCCCCCCEEEEEEECCC
T ss_conf             910452469997588579960676213884178887678726689988998731594

SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: C-terminal domain of eukaryotic initiation translation factor 5a (eIF5a)
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]