RPSBLAST alignment of GI: 254781067 and protein with PDBid: 1yby
>1yby_A Translation elongation factor P; conserved hypothetical protein, structural genomics, PSI, protein structure initiative; 1.95A {Clostridium thermocellum} Length = 215
Score = 163 bits (415), Expect = 1e-41
Identities = 60/187 (32%), Positives = 103/187 (55%)
Query: 1 MVKVIASAVRKGNVLDVDGKLYIVLVAKNFHPGKGTPITQVEMRRISDGVKVSNRWRTTE 60
+ + A + G ++DG+++ V+ ++ PGKG + +++ I G + + T+
Sbjct: 29 GLMISAGDFKNGVTFELDGQIFQVIEFQHVKPGKGAAFVRTKLKNIVTGATIEKTFNPTD 88
Query: 61 QVERAFVEDQRFQFLYQDQEGFHFMNPETYDQVTVSEEVIGDQKVYFQEGMEVKLLIHEG 120
++ +A +E + Q+LY D + ++FM+ ET++Q+ + ++ IGD + +E VK+L H+G
Sbjct: 89 KMPKAHIERKDMQYLYNDGDLYYFMDTETFEQLPLGKDKIGDALKFVKENEIVKVLSHKG 148
Query: 121 VALSVEVPRHVVFTVIDTEPSSKGQTVTASYKPAILSNDIRTTVPPHINIGDDIVILTED 180
+E P V V DTEP KG T T + KPAI+ VP +N GD I I T
Sbjct: 149 NVFGIEPPNFVELEVTDTEPGFKGDTATGATKPAIVETGASIKVPLFVNKGDIIRIDTRT 208
Query: 181 NSYVERV 187
Y+ERV
Sbjct: 209 GEYMERV 215