RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254781068|ref|YP_003065481.1| hypothetical protein
CLIBASIA_04850 [Candidatus Liberibacter asiaticus str. psy62]
         (43 letters)



>gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type.  This
           model describes a family of fungal ascorbate oxidases,
           within a larger family of multicopper oxidases that also
           includes plant ascorbate oxidases (TIGR03388), plant
           laccases and laccase-like proteins (TIGR03389), and
           related proteins. The member from Acremonium sp. HI-25
           is characterized.
          Length = 538

 Score = 24.0 bits (52), Expect = 8.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 9   LAIQNRQIGGVVRFDYDFKKKS 30
             I + Q+GG  R+   FK K+
Sbjct: 244 AKIDHLQLGGGQRYSVLFKAKT 265


>gnl|CDD|181141 PRK07845, PRK07845, flavoprotein disulfide reductase; Reviewed.
          Length = 466

 Score = 24.1 bits (53), Expect = 8.6
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 6   PIALAIQNR 14
           PIALA+QNR
Sbjct: 424 PIALAVQNR 432


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.319    0.136    0.377 

Gapped
Lambda     K      H
   0.267   0.0768    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 691,207
Number of extensions: 23996
Number of successful extensions: 39
Number of sequences better than 10.0: 1
Number of HSP's gapped: 39
Number of HSP's successfully gapped: 6
Length of query: 43
Length of database: 5,994,473
Length adjustment: 17
Effective length of query: 26
Effective length of database: 5,627,137
Effective search space: 146305562
Effective search space used: 146305562
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.0 bits)