HHSEARCH alignment of GI: 254781071 and SCOP domain: d1tr9a_

Alignment
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]}
Probab=98.25  E-value=2.8e-07  Score=59.54  Aligned_cols=66  Identities=15%  Similarity=0.143  Sum_probs=45.8

Q ss_pred             CCCCCHHHHHHHCCCCH----------HHHHHHHHCCCHHHHHHHHHHHHHHHHHCC---------------CCC-----
Q ss_conf             75712037755412349----------999999972412454255499999999979---------------999-----
Q gi|254781071|r    2 RWAFKALLALIACKWNL----------SRIIAVYNAGADQQDPADVIELIYAHVKSG---------------EIK-----   51 (71)
Q Consensus         2 ~W~f~g~~~~v~~~w~~----------~~~~~a~nAG~Dle~p~~~~~~i~~aV~~G---------------~i~-----   51 (71)
                      +|||+|+|  |+||.+.          ++++.|++||.|+.+.++..+...+++.+.               ++.     
T Consensus       233 ~lgF~G~I--iSD~l~m~~~~~~~~~~e~~~~al~AG~Dl~l~~~~~~~~~e~i~~~~~~~~~~~~~~~~~~~~~~~~l~  310 (330)
T d1tr9a_         233 ELGFKGIV--FSDDLSMEGAAVMGGPVERSHQALVAGCDMILICNKREAAVEVLDNLPIMEVPQAEALLKKQQFSYSELK  310 (330)
T ss_dssp             CTCCCSEE--EEEETTCCTTCCSCSHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHSCCCCCGGGGGGSCSCCCCHHHHT
T ss_pred             HCCCCCEE--ECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             26997179--8257651201105998999999998599789878976999999982410010025678776554099999


Q ss_pred             -HHHHHHHHHHHHHHHHHH
Q ss_conf             -899999999999999973
Q gi|254781071|r   52 -PSRIESAYQRIIYLKNKM   69 (71)
Q Consensus        52 -~~~id~sv~RIL~lk~kl   69 (71)
                       .+++.++..++.+|+.|+
T Consensus       311 ~~~r~~~~~~~~~~l~e~~  329 (330)
T d1tr9a_         311 RLERWQQASANMQRLIEQF  329 (330)
T ss_dssp             TSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999852


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-hexosaminidase NagZ
species: Vibrio cholerae [TaxId: 666]