HHsearch results for GI: 254781073 and protein with PDBid: 1vju_A
>1vju_A Coproporphyrinogen III oxidase; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.40A {Leishmania major} SCOP: d.248.1.1 PDB: 2qt8_A* 3dwr_A 3dws_A* 3ejo_A 3e8j_A*
Probab=100.00 E-value=0 Score=922.23 Aligned_cols=274 Identities=38% Similarity=0.739 Sum_probs=262.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEE
Q ss_conf 68766999999999999999999999999630102222344566512521231788888777504899505946536887
Q gi|254781073|r 10 CPDDIEERKRISQRKFENLQSIICTEFEKLENEAHENSANRSPKIFTVKHWLRDKSQKEDLGGGRMATLCAGKVFEKAAV 89 (307)
Q Consensus 10 ~p~~ie~kk~~~~~wF~~LQd~Ic~~fE~lE~~~~~~~~~~~~~~F~~d~W~R~~g~~~~~GGG~s~VL~~G~VFEKaGV 89 (307)
.-.+|..+.+.+++||++||++||++||++|++ ++|++|.|+|++| |||+||||++|+|||||||
T Consensus 5 ~~~~m~~~ie~Vk~~F~~LQ~~Ic~~lE~ldg~----------~~F~~d~W~R~~g-----GGG~t~Vl~~G~VfEKaGV 69 (309)
T 1vju_A 5 HHHHMSLAVEAVKDFLLKLQDDICEALEAEDGQ----------ATFVEDKWTREGG-----GGGRTRVMVDGAVIEKGGV 69 (309)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHSS----------CCCEEEEEEETTT-----EEEEEEEEESCSSEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC----------CCEEECCCCCCCC-----CCCCEEEEECCEEEEECCE
T ss_conf 200043659999999999999999999964087----------8733545547875-----5541489866736750667
Q ss_pred EEEEEECCCHHHHHHHHHHCCCCCCCEEECEEEEEECCCCCCCHHHCCHHHEEEC------CCCCCCCCCCCCCCCHHHC
Q ss_conf 7763003542677642111026765100000223313688744010230210202------4312532001100000110
Q gi|254781073|r 90 LVSTVYGDLSPDFKDQILGTTKNPYFWATGLSVIVHPYNPHVPAVHFNIRMIVTG------AYWFGGGIDLTPSLESRRH 163 (307)
Q Consensus 90 NfS~V~G~~~p~~a~~i~g~~~~~~F~AtGiS~V~Hp~nP~vPt~H~N~R~f~~~------~~WFGGG~DLTP~~~~~~y 163 (307)
|||+|+|+++|+++.++++..++.+|||||||||+||+||+|||+|||+|||+|. .||||||+||||| |
T Consensus 70 N~S~V~G~~lp~~a~~~~~~~~~~~f~A~GiSlV~HP~NP~vPt~H~N~R~f~~~~~~~~~~wWFGGG~DLTP~-----y 144 (309)
T 1vju_A 70 NFSHVYGKGLPMSSTERHPDIAGCNFEAMGVSLVIHPKNPHVPTSHANVRLFVAEREGKEPVWWFGGGFDLTPY-----Y 144 (309)
T ss_dssp EEEEEEEEC-----------CTTCEEEEEEEEEEEEESSTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECS-----S
T ss_pred EEEEEECCCCCHHHHHCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCHHH-----H
T ss_conf 79999666674234431654468751330243200368998862222469999825898653377134342054-----5
Q ss_pred CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 43267999999998403656733428999976787434532521234301010147866658967799999999999999
Q gi|254781073|r 164 SYDPDVIFFHNTLKEMCSQHAVANYTHYKEWCDRYFYLPHRQESRGIGGIFFDHLHSSPEMGGIDADFSFISAVGDCFIK 243 (307)
Q Consensus 164 ~~~eD~~~fH~~~k~~Cd~~~~~~Y~~fKk~CD~YFylpHR~E~RGvGGIFFD~l~~~~~~~~~e~~f~f~~~vg~~fl~ 243 (307)
+++||+++||++||++||+|+++||++||||||+|||||||+|+|||||||||||++ ++++++|+|+++||++|++
T Consensus 145 ~~~eD~~~fH~~lK~~Cd~~~~~~Y~~fKk~CD~YFylpHR~E~RGiGGIFfD~l~~----~~~~~~f~f~~~vg~~fl~ 220 (309)
T 1vju_A 145 AVEEDCRDFHQVAQDLCKPFGADVYARFKGWCDEYFFIPYRNEARGIGGLFFDDLNE----WPFEKCFEFVQAVGKGYMD 220 (309)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCTTHHHHHHHHHHHHSEEGGGTEESSSEEEEEEEECS----SCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC----CCHHHHHHHHHHHHHHHHH
T ss_conf 308899999999998750123777799999867862030136676741566131147----9888879999999999999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCCCCCC
Q ss_conf 9999998754799998999885420240112211110255357357888111411288878897
Q gi|254781073|r 244 LYPSLVRRNYHHLFSEQDRQEQLIRRGRYAEFNLLYDKGTNFGFKTGGNVESILASMPPLVAWP 307 (307)
Q Consensus 244 ~y~~Iv~~r~~~~~~~~~k~~Ql~rRgRYvEFNL~yDRGT~FGL~t~gr~esIl~SlPp~~~Wp 307 (307)
+|+|||+||++++||++||+|||+||||||||||||||||+|||+||||||||||||||+|+|.
T Consensus 221 ~Y~~Iv~~r~~~~~t~~~k~~Ql~rRGRYvEFNL~yDRGT~FGL~tggr~esILmSlPp~a~W~ 284 (309)
T 1vju_A 221 AYIPIVNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQSGGRTESILISLPPRARWG 284 (309)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCCHHHHGGGSCSCCCCC
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCHHHHEECCCCCCCCC
T ss_conf 8899999853799998899999972871489998777685002547995221012599768525