HHSEARCH alignment of GI: 254781073 and SCOP domain: d1tkla_

Alignment
>d1tkla_ d.248.1.1 (A:) Coproporphyrinogen III oxidase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=0  Score=906.70  Aligned_cols=272  Identities=40%  Similarity=0.762  Sum_probs=254.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEE
Q ss_conf             87669999999999999999999999996301022223445665125212317888887775048995059465368877
Q gi|254781073|r   11 PDDIEERKRISQRKFENLQSIICTEFEKLENEAHENSANRSPKIFTVKHWLRDKSQKEDLGGGRMATLCAGKVFEKAAVL   90 (307)
Q Consensus        11 p~~ie~kk~~~~~wF~~LQd~Ic~~fE~lE~~~~~~~~~~~~~~F~~d~W~R~~g~~~~~GGG~s~VL~~G~VFEKaGVN   90 (307)
                      |.++.+ ++.+++||++||++||++||+||+.           +|++|.|+|+++    +|||+||||++|+||||||||
T Consensus         4 p~~~~m-r~~~e~~~~~lQ~~Ic~~lE~ld~~-----------~F~~d~W~R~~~----gGGG~s~vl~~G~VfEKaGVN   67 (325)
T d1tkla_           4 PRNLPI-RQQMEALIRRKQAEITQGLESIDTV-----------KFHADTWTRGND----GGGGTSMVIQDGTTFEKGGVN   67 (325)
T ss_dssp             GGGSCH-HHHHHHHHHHHHHHHHHHHHTTSSS-----------CCEEEEEECGGG----CEEEEEEEEESCSSEEEEEEE
T ss_pred             CCCCHH-HHHHHHHHHHHHHHHHHHHHHHCCC-----------CCEEECCCCCCC----CCCCEEEEECCCCEEEEEEEE
T ss_conf             440329-9999999999999999999975078-----------716445432799----988569997599478864589


Q ss_pred             EEEEECCCHHHHHHHHHHCCC----------------CCCCEEECEEEEEECCCCCCCHHHCCHHHEEEC-------CCC
Q ss_conf             763003542677642111026----------------765100000223313688744010230210202-------431
Q gi|254781073|r   91 VSTVYGDLSPDFKDQILGTTK----------------NPYFWATGLSVIVHPYNPHVPAVHFNIRMIVTG-------AYW  147 (307)
Q Consensus        91 fS~V~G~~~p~~a~~i~g~~~----------------~~~F~AtGiS~V~Hp~nP~vPt~H~N~R~f~~~-------~~W  147 (307)
                      ||+|+|+++|+++.++++..+                +.+|||||||||+||+||+|||+|||+|||+|.       .||
T Consensus        68 ~S~V~G~~~p~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~f~AtGiSlViHP~NP~vPt~H~N~R~f~~~~~~~~~~~wW  147 (325)
T d1tkla_          68 VSVVYGQLSPAAVSAMKADHKNLRLPEDPKTGLPVTDGVKFFACGLSMVIHPVNPHAPTTHLNYRYFETWNQDGTPQTWW  147 (325)
T ss_dssp             EEEEEEEECHHHHTTTGGGCTTCCCCCCSSSSCCCSSCEEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECTTSCEEEEE
T ss_pred             EEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHCCCCCCCCHHCCCCEEEEEECCCCCCCEEE
T ss_conf             99998536989998503112355675422236743357750574103000025787401023422799754788754048


Q ss_pred             CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCCH
Q ss_conf             25320011000001104326799999999840365673342899997678743453252123430101014786665896
Q gi|254781073|r  148 FGGGIDLTPSLESRRHSYDPDVIFFHNTLKEMCSQHAVANYTHYKEWCDRYFYLPHRQESRGIGGIFFDHLHSSPEMGGI  227 (307)
Q Consensus       148 FGGG~DLTP~~~~~~y~~~eD~~~fH~~~k~~Cd~~~~~~Y~~fKk~CD~YFylpHR~E~RGvGGIFFD~l~~~~~~~~~  227 (307)
                      ||||+|||||     |+++||+++||++||++||+|+++||++||||||+|||||||+|+|||||||||||++    .++
T Consensus       148 FGGG~DLTP~-----y~~~eD~~~fH~~lK~~Cd~~~~~~Y~~fKk~CD~YFylpHR~E~RGvGGIFfD~l~~----~~~  218 (325)
T d1tkla_         148 FGGGADLTPS-----YLYEEDGQLFHQLHKDALDKHDTALYPRFKKWCDEYFYITHRKETRGIGGIFFDDYDE----RDP  218 (325)
T ss_dssp             EEEEEEEECS-----SCCHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTEEGGGTEESSCCEEEEEEECS----SCH
T ss_pred             EEEEECCCCC-----CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC----CCH
T ss_conf             8400113301-----3315889999999988750478788899998765522554102245410112455514----641


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC-CCCHHHEEECCCCCCCC
Q ss_conf             77999999999999999999998754799998999885420240112211110255357357-88811141128887889
Q gi|254781073|r  228 DADFSFISAVGDCFIKLYPSLVRRNYHHLFSEQDRQEQLIRRGRYAEFNLLYDKGTNFGFKT-GGNVESILASMPPLVAW  306 (307)
Q Consensus       228 e~~f~f~~~vg~~fl~~y~~Iv~~r~~~~~~~~~k~~Ql~rRgRYvEFNL~yDRGT~FGL~t-~gr~esIl~SlPp~~~W  306 (307)
                      |++|+|+++||++||++|+|||++|++++||++||+|||+||||||||||||||||+|||+| |||||||||||||+|+|
T Consensus       219 e~~f~f~~~vg~~fl~~Y~~Iv~kr~~~~~t~~~r~~Ql~rRGRYvEFNLlyDRGT~FGL~t~G~r~esILmSlPp~a~W  298 (325)
T d1tkla_         219 QEILKMVEDCFDAFLPSYLTIVKRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASW  298 (325)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHHHHTTTTSCCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHSTTCCHHHHGGGSCSEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCCEEEEECCCCCCEE
T ss_conf             78999999987767999999999843563007899999984772489999962584130024998700477538987722


Q ss_pred             C
Q ss_conf             7
Q gi|254781073|r  307 P  307 (307)
Q Consensus       307 p  307 (307)
                      .
T Consensus       299 ~  299 (325)
T d1tkla_         299 L  299 (325)
T ss_dssp             C
T ss_pred             E
T ss_conf             0


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Coproporphyrinogen III oxidase
superfamily: Coproporphyrinogen III oxidase
family: Coproporphyrinogen III oxidase
domain: Coproporphyrinogen III oxidase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]