HHsearch alignment of GI: 254781074 and MMDB domain: 1mug_A_

>1mug_A (A:) Protein (G:T/U specific DNA glycosylase); hydrolase; 1.80A {Escherichia coli}
Probab=96.04  E-value=0.11  Score=30.88  Aligned_cols=127  Identities=16%  Similarity=0.126  Sum_probs=76.1

Q ss_pred             HHCEEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC--CHHHHHHCCCEEEECCHHCCCCCC
Q ss_conf             617799981188877520007100034798630469999999997418888774--012432208968860101123686
Q gi|254781074|r   57 NKVKVVILGQDPYHNYGQAHGLCFSVPLGIRIPPSLVNVYKELQEDVNFIPPTH--GFLEHWGHEGVLLLNAVLTVEEGR  134 (227)
Q Consensus        57 ~~vKVVIlGQDPY~~~g~A~GLaFsv~~~~~~p~SLrNI~Kel~~d~~~~~~~~--g~L~~Wa~QGVLLLNt~LTv~~g~  134 (227)
                      .+.||+|+|+.|=.. +...|..|+-+.+.     |.++..+    .+......  -+......++|.+.|++=......
T Consensus         8 ~~a~ilivG~~Pg~~-~~~~g~~f~g~g~~-----l~~~l~~----~~~~~~~~~~~~~~~l~~~~i~~~~~v~~~~~~~   77 (168)
T 1mug_A            8 PGLRVVFCGINPGLS-SAGTGFPFAHPANR-----FWKVIYQ----AGFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQA   77 (168)
T ss_dssp             TTCSEEEEESSCCHH-HHHHSSTTCSTTCC-----HHHHHHH----TTSSSSCCCGGGGGGGGGGTEEEEESCCCCCSSG
T ss_pred             CCCCEEEEECCCCHH-HHHCCCCCCCCHHH-----HHHHHHH----HCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCC
T ss_conf             999889982798965-88559987786188-----9999999----6599865567776553323667723767788888


Q ss_pred             --CHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCC----CCCC------CEEEEECCCCHHHCCC
Q ss_conf             --0445432599999999999961789879999753233344205----7666------0799847888222578
Q gi|254781074|r  135 --AASHRGRGWEQFTDSVIDLISNNHQNIVFMLWGASAQKKQDVL----DHKR------HLVLKAAHPSPLSASH  197 (227)
Q Consensus       135 --~~SH~~~gW~~ft~~ii~~l~~~~~~vVfiLwG~~A~~~~~~i----~~~~------~~il~~~HPSPls~~~  197 (227)
                        +....   .+.....+.+.|...++. |.++.|+.|.+.....    ...+      .-+..-+||||+.+.+
T Consensus        78 ~~~~~~e---~~~c~~~l~~ei~~~~P~-iiv~lG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~sp~~~~~  148 (168)
T 1mug_A           78 NEVSKQE---LHAGGRKLIEKIEDYQPQ-ALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVS  148 (168)
T ss_dssp             GGSCHHH---HHHHHHHHHHHHHHHCCS-EEEEECHHHHHHHHTCCSCCSEEEEEEETTEEEEEECCCSTTSCCC
T ss_pred             CCCCHHH---HHHHHHHHHHHHHHHCCC-EEEECCHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCHHHHCC
T ss_conf             9989999---999899999999980988-8998595999998477766445400025897779931898778289