HHsearch results for GI: 254781074 and protein with PDBid: 1mug_A
>1mug_A Protein (G:T/U specific DNA glycosylase); hydrolase; 1.80A {Escherichia coli} SCOP: c.18.1.2 PDB: 1mtl_A 1mwi_A* 1mwj_A
Probab=95.74 E-value=0.12 Score=29.75 Aligned_cols=127 Identities=15% Similarity=0.110 Sum_probs=67.9
Q ss_pred HHCEEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHCCCEEEECCHHCCCCCCC
Q ss_conf 61779998118887752000710003479863046999999999741888877-40124322089688601011236860
Q gi|254781074|r 57 NKVKVVILGQDPYHNYGQAHGLCFSVPLGIRIPPSLVNVYKELQEDVNFIPPT-HGFLEHWGHEGVLLLNAVLTVEEGRA 135 (227)
Q Consensus 57 ~~vKVVIlGQDPY~~~g~A~GLaFsv~~~~~~p~SLrNI~Kel~~d~~~~~~~-~g~L~~Wa~QGVLLLNt~LTv~~g~~ 135 (227)
.+.||+|+|+-|=.. ...+|..|+-+.+ . ..+.|........+. --+...-.+.||-+.|.+-.+.....
T Consensus 8 p~~~vlivG~~Pg~~-s~~~g~~y~~p~n-~-------fw~~l~~~~~~~~~~~~~~~~~l~~~~i~ltd~v~~~~~~~~ 78 (168)
T 1mug_A 8 PGLRVVFCGINPGLS-SAGTGFPFAHPAN-R-------FWKVIYQAGFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQAN 78 (168)
T ss_dssp TTCSEEEEESSCCHH-HHHHSSTTCSTTC-C-------HHHHHHHTTSSSSCCCGGGGGGGGGGTEEEEESCCCCCSSGG
T ss_pred CCCCEEEEECCCCHH-HHHCCCCCCCCHH-H-------HHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCC
T ss_conf 999889984798977-8855998679557-9-------999999826877788877764123366798513245577889
Q ss_pred HHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHH-HHCCCC---------CCCEEEEECCCCHHH
Q ss_conf 44543259999999999996178987999975323334-420576---------660799847888222
Q gi|254781074|r 136 ASHRGRGWEQFTDSVIDLISNNHQNIVFMLWGASAQKK-QDVLDH---------KRHLVLKAAHPSPLS 194 (227)
Q Consensus 136 ~SH~~~gW~~ft~~ii~~l~~~~~~vVfiLwG~~A~~~-~~~i~~---------~~~~il~~~HPSPls 194 (227)
.....- .+.-...+.+.|...++.+| ++.|+.|.+. ...... ....++..+||||+.
T Consensus 79 ~~~~~E-~~~~~~~L~~~l~~~~P~iI-~~~G~~a~~~~~~~~~~~~g~q~~~~~~~~~~vlPspS~~~ 145 (168)
T 1mug_A 79 EVSKQE-LHAGGRKLIEKIEDYQPQAL-AILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLS 145 (168)
T ss_dssp GSCHHH-HHHHHHHHHHHHHHHCCSEE-EEECHHHHHHHHTCCSCCSEEEEEEETTEEEEEECCCSTTS
T ss_pred CCCHHH-HHHHHHHHHHHHHHHCCCHH-HHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHH
T ss_conf 973899-98721889999998391801-42699999998477877655324567997779944899677