HHsearch results for GI: 254781074 and protein with PDBid: 1udg_A

>1udg_A Uracil-DNA glycosylase; hydrolase; 1.75A {Herpes simplex virus} SCOP: c.18.1.1 PDB: 1lau_E 1udh_A 1udi_E 2c53_A* 2c56_A*
Probab=100.00  E-value=0  Score=589.50  Aligned_cols=219  Identities=39%  Similarity=0.666  Sum_probs=208.3

Q ss_pred             CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCCCCCEEEC
Q ss_conf             68687338999888726589999999999999779808588769999984299861779998118887752000710003
Q gi|254781074|r    3 GVKIHESWKSLLENHFQSEHMRNLKEFLLSEKRKGKRIFPRGSHYFRAFDITPFNKVKVVILGQDPYHNYGQAHGLCFSV   82 (227)
Q Consensus         3 ~l~i~~sW~~~L~~e~~~~~~~~i~~~l~~e~~~~~~i~P~~~~IF~af~~~p~~~vKVVIlGQDPY~~~g~A~GLaFsv   82 (227)
                      .+.|+++|+++|.+|+.++|+.+|.++|.+++. +.+|||+.++|||||++||+++||||||||||||++|||+||||||
T Consensus        25 ~~~i~~sW~~~L~~e~~k~y~~~l~~~l~~~~~-~~~i~P~~~~iF~af~~~~~~~vKVVIlGQDPY~~~~~A~GLaFsv  103 (244)
T 1udg_A           25 VFLIDDAWRPLMEPELANPLTAHLLAEYNRRCQ-TEEVLPPREDVFSWTRYCTPDEVRVVIIGQDPYHHPGQAHGLAFSV  103 (244)
T ss_dssp             HHTCCGGGHHHHHHHHTSHHHHHHHHHHHHHHH-HSCEESCTTTTTTHHHHSCGGGCCEEEEECSCCCSTTTCSSSSSCC
T ss_pred             HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC-CCEEECCHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCCCCEEECC
T ss_conf             668986899999999754999999999999981-9958897299999884798668679998517999998607655136


Q ss_pred             CCCCCCHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHCCCEEEECCHHCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCE
Q ss_conf             479863046999999999741-8888774012432208968860101123686044543259999999999996178987
Q gi|254781074|r   83 PLGIRIPPSLVNVYKELQEDV-NFIPPTHGFLEHWGHEGVLLLNAVLTVEEGRAASHRGRGWEQFTDSVIDLISNNHQNI  161 (227)
Q Consensus        83 ~~~~~~p~SLrNI~Kel~~d~-~~~~~~~g~L~~Wa~QGVLLLNt~LTv~~g~~~SH~~~gW~~ft~~ii~~l~~~~~~v  161 (227)
                      +.++++|||||||||||++|+ ++..+.+|||++||+||||||||+|||++|+++||+++||++||+.+|++|+++++++
T Consensus       104 ~~~~~~ppSLrNI~kel~~d~~~~~~~~~g~L~~Wa~QGVLLLNt~LTv~~g~~~SH~~~gWe~ft~~ii~~l~~~~~~i  183 (244)
T 1udg_A          104 RANVPPPPSLRNVLAAVKNCYPEARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGL  183 (244)
T ss_dssp             CTTSCCCHHHHHHHHHHHHHCTTCCCCSCCCCHHHHHTTEEEEESSCCEETTBTTTTTTSSHHHHHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEECEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf             89999985699999999864378888887777778649899970658861577888788987999999999998368986


Q ss_pred             EEEEECCHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             999975323334420576660799847888222578862787089999999987889746508
Q gi|254781074|r  162 VFMLWGASAQKKQDVLDHKRHLVLKAAHPSPLSASHGFFGCRHFSKANRYLQEHGKTTVNWQI  224 (227)
Q Consensus       162 VfiLwG~~A~~~~~~i~~~~~~il~~~HPSPls~~~gF~~~~~F~~~N~~L~~~~~~~IdW~l  224 (227)
                      ||||||++||++.. ++..+|+||+++||||||+ +||+||+||++||++|+++|++||||+|
T Consensus       184 VfiLWG~~Aq~~~~-~~~~~h~Il~~~HPSPls~-~gF~gs~~F~k~N~~L~~~~~~pIdW~l  244 (244)
T 1udg_A          184 VFMLWGTHAQNAIR-PDPRVHCVLKFSHPSPLSK-VPFGTCQHFLVANRYLETRSISPIDWSV  244 (244)
T ss_dssp             EEEEESHHHHHHCC-CCTTTSEEEEECCSSTTSS-SCGGGCCHHHHHHHHHHTTTCCCCCCCC
T ss_pred             EEEEECHHHHHHCC-CCCCCCEEEEECCCCCCCC-CCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf             99996789885342-4788886998689882113-6899997689999999987999903739