BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781075|ref|YP_003065488.1| hypothetical protein CLIBASIA_04885 [Candidatus Liberibacter asiaticus str. psy62] (266 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781075|ref|YP_003065488.1| hypothetical protein CLIBASIA_04885 [Candidatus Liberibacter asiaticus str. psy62] gi|254040752|gb|ACT57548.1| hypothetical protein CLIBASIA_04885 [Candidatus Liberibacter asiaticus str. psy62] Length = 266 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 266/266 (100%), Positives = 266/266 (100%) Query: 1 MWERIANTIVATSKKWSFLFAILSPTEVYNVHRRIWHLLRDDFGYFTKRTFFCFAFFITI 60 MWERIANTIVATSKKWSFLFAILSPTEVYNVHRRIWHLLRDDFGYFTKRTFFCFAFFITI Sbjct: 1 MWERIANTIVATSKKWSFLFAILSPTEVYNVHRRIWHLLRDDFGYFTKRTFFCFAFFITI 60 Query: 61 IYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKL 120 IYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKL Sbjct: 61 IYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKL 120 Query: 121 RMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQ 180 RMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQ Sbjct: 121 RMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQ 180 Query: 181 KQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEAIKYINHVY 240 KQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEAIKYINHVY Sbjct: 181 KQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEAIKYINHVY 240 Query: 241 LLGKWISRGEIQRSQIARREYIGYLQ 266 LLGKWISRGEIQRSQIARREYIGYLQ Sbjct: 241 LLGKWISRGEIQRSQIARREYIGYLQ 266 >gi|254781163|ref|YP_003065576.1| hypothetical protein CLIBASIA_05350 [Candidatus Liberibacter asiaticus str. psy62] gi|254040840|gb|ACT57636.1| hypothetical protein CLIBASIA_05350 [Candidatus Liberibacter asiaticus str. psy62] Length = 214 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 55/270 (20%), Positives = 100/270 (37%), Gaps = 73/270 (27%) Query: 3 ERIANTIVATSKKWSFL---FAILSPTEVYNVHRRIWHLLR---DDFGYFTKRTFF---C 53 + I +T K F+ F + E R++W LLR +F RTF C Sbjct: 6 DSIPKITSSTGKCLKFIMRAFGLFDSAE----QRKLWSLLRYWSVEFWELLCRTFLWLLC 61 Query: 54 FAFFITIIYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILV 113 FF Y FF + Y +S + I + +L S ++ Sbjct: 62 LGFFTLFAYWFFG-----------EKFSYDVSIK-----------IVLAINVLLFSFVIA 99 Query: 114 ATDDRKLRMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDRE 173 + + M +D ++ +I +I + QY E + + ++++ N F + + Sbjct: 100 LLGNPNIEMAKDIAQLFTLIDNIENGYGQYLE--KISQKNVEKDFFNSK-----FFTHFK 152 Query: 174 EYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEAI 233 EYI DE++ IL RY IE IP L + ++ Sbjct: 153 EYI-----------------------------DEVDKILMRYGIEGIP--LTDFDHEKIK 181 Query: 234 KYINHVYLLGKWISRGEIQRSQIARREYIG 263 Y+ H+ ++ + + I ++ R ++IG Sbjct: 182 SYLTHIKIVRDCLKKDNIHYAKELRNDWIG 211 >gi|262373387|ref|ZP_06066666.1| N-6 DNA methylase [Acinetobacter junii SH205] gi|262313412|gb|EEY94497.1| N-6 DNA methylase [Acinetobacter junii SH205] Length = 491 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 14/75 (18%) Query: 98 DIETFLALLYMSCILVATDDRKLRMIED-----------GDRIIEIIQSIRRAFDQYKEE 146 D E F AL ++ V DD + R++++ G I ++I I+R FD K + Sbjct: 87 DNELFPALQNLA---VENDDPRARVVQNVFADAYNYMKSGGLIRKVINQIQRGFDFNKSK 143 Query: 147 ERKALSDIQEQLLND 161 ER A DI EQLL D Sbjct: 144 ERHAFGDIYEQLLRD 158 >gi|30263772|ref|NP_846149.1| bacteriocin ABC transporter, permease protein subunit, putative [Bacillus anthracis str. Ames] gi|47529191|ref|YP_020540.1| bacteriocin ABC transporter permease protein subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49186616|ref|YP_029868.1| bacteriocin ABC transporter permease subunit [Bacillus anthracis str. Sterne] gi|165872395|ref|ZP_02217030.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0488] gi|167635830|ref|ZP_02394139.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0442] gi|167639807|ref|ZP_02398076.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0193] gi|170687833|ref|ZP_02879047.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0465] gi|170706793|ref|ZP_02897251.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0389] gi|177652078|ref|ZP_02934624.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0174] gi|190568424|ref|ZP_03021331.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis Tsiankovskii-I] gi|227813326|ref|YP_002813335.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. CDC 684] gi|229601189|ref|YP_002868008.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0248] gi|254683525|ref|ZP_05147385.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. CNEVA-9066] gi|254735806|ref|ZP_05193512.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. Western North America USA6153] gi|254739668|ref|ZP_05197362.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. Kruger B] gi|254751064|ref|ZP_05203103.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. Vollum] gi|254759382|ref|ZP_05211407.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. Australia 94] gi|30258416|gb|AAP27635.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. Ames] gi|47504339|gb|AAT33015.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49180543|gb|AAT55919.1| bacteriocin ABC transporter, permease protein subunit, putative [Bacillus anthracis str. Sterne] gi|164711833|gb|EDR17375.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0488] gi|167512208|gb|EDR87585.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0193] gi|167528787|gb|EDR91545.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0442] gi|170128211|gb|EDS97080.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0389] gi|170668149|gb|EDT18898.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0465] gi|172082447|gb|EDT67512.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0174] gi|190560428|gb|EDV14406.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis Tsiankovskii-I] gi|227003716|gb|ACP13459.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. CDC 684] gi|229265597|gb|ACQ47234.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0248] Length = 250 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 69 INFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDR 128 + +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D+K+ + Sbjct: 20 LTWLVPFATMLIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKDKKM----NNRS 75 Query: 129 IIEIIQSIRRAF 140 I+ + S++R + Sbjct: 76 ILSLPASLKRVW 87 >gi|262280000|ref|ZP_06057785.1| N-6 DNA methylase [Acinetobacter calcoaceticus RUH2202] gi|262260351|gb|EEY79084.1| N-6 DNA methylase [Acinetobacter calcoaceticus RUH2202] Length = 491 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 14/75 (18%) Query: 98 DIETFLALLYMSCILVATDDRKLRMIED-----------GDRIIEIIQSIRRAFDQYKEE 146 D E F AL ++ V DD + R++++ G I +II I++ FD K + Sbjct: 87 DNELFPALQNLA---VENDDPRARVVQNVFSDAYNYMKSGGLIRKIINQIQKGFDFNKSK 143 Query: 147 ERKALSDIQEQLLND 161 ER A DI EQLL D Sbjct: 144 ERHAFGDIYEQLLRD 158 >gi|254722046|ref|ZP_05183835.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A1055] Length = 250 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 69 INFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDR 128 + +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D+K+ + Sbjct: 20 LTWLVPFATMLIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKDKKM----NNRS 75 Query: 129 IIEIIQSIRRAF 140 I+ + S++R + Sbjct: 76 ILSLPVSLKRVW 87 >gi|65321092|ref|ZP_00394051.1| COG4200: Uncharacterized protein conserved in bacteria [Bacillus anthracis str. A2012] Length = 501 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 4/71 (5%) Query: 69 INFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDR 128 + +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D+K+ + Sbjct: 20 LTWLVPFATMLIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKDKKM----NNRS 75 Query: 129 IIEIIQSIRRA 139 I+ + S++R Sbjct: 76 ILSLPASLKRV 86 >gi|325115486|emb|CBZ51041.1| xenopus 14s cohesin smc1 subunit, related [Neospora caninum Liverpool] Length = 1652 Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%) Query: 133 IQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQKQIDLIH----Q 188 +Q+ R +++ EE++K L+ +Q QL ++ + R++ I Q+ +D IH Q Sbjct: 1007 LQAKARVWEEQAEEKQKKLTRVQAQLQALRERE----AARKQEITAKQQDLDEIHASLLQ 1062 Query: 189 NIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEA 232 RH AR+ + LE R +E++ +L + E+ Sbjct: 1063 QQQRHFARLDEAVGRAHVHLEQRRRRQRVEALKTELASLHAQES 1106 >gi|301055256|ref|YP_003793467.1| putative transporter protein [Bacillus anthracis CI] gi|300377425|gb|ADK06329.1| predicted transporter protein [Bacillus cereus biovar anthracis str. CI] Length = 250 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Query: 71 FLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDRII 130 +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D+K+ + I+ Sbjct: 22 WLVPFATMLIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKDKKM----NNRSIL 77 Query: 131 EIIQSIRRAF 140 + S++R + Sbjct: 78 SLPVSLKRVW 87 >gi|196038333|ref|ZP_03105642.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus cereus NVH0597-99] gi|228916404|ref|ZP_04079971.1| Lantibiotic permease protein spaE/mutE [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229092804|ref|ZP_04223942.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus Rock3-42] gi|196030741|gb|EDX69339.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus cereus NVH0597-99] gi|228690602|gb|EEL44383.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus Rock3-42] gi|228843207|gb|EEM88288.1| Lantibiotic permease protein spaE/mutE [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 250 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Query: 71 FLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDRII 130 +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D+K+ + I+ Sbjct: 22 WLVPFATMLIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKDKKM----NNRSIL 77 Query: 131 EIIQSIRRAF 140 + S++R + Sbjct: 78 SLPVSLKRVW 87 >gi|316974869|gb|EFV58339.1| tankyrase-1 [Trichinella spiralis] Length = 1200 Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 8/129 (6%) Query: 108 MSCILVATDDRKLRMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIV 167 + +L+A+ D L ++ I S A D+Y EE D+Q Q K Sbjct: 820 LDTVLIASPDELLPVVSSFTAIPSGENSTN-AVDKYANEE--LFHDVQFQFCRPIDGKSD 876 Query: 168 FSSDREEYIGLHQKQI----DLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLD 223 F + +Y Q+Q D +HQ D+ LA M L +S LE + + E I LD Sbjct: 877 FYTQYLDYPIKQQQQQNRARDFLHQERDKPLAEMSVPLFLKSIGLECLKDLFYKEQITLD 936 Query: 224 -LPEMSQDE 231 L EMS ++ Sbjct: 937 VLVEMSHED 945 >gi|327284018|ref|XP_003226736.1| PREDICTED: peroxisomal proliferator-activated receptor A-interacting complex 285 kDa protein-like [Anolis carolinensis] Length = 2825 Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 10/75 (13%) Query: 193 HLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEAIKYINHVYLLGKWISRG--- 249 H MK V E+ SR+++E IP LP++ +++AI + H LL K I+ G Sbjct: 2252 HFMSMKTIPV----EVTQASSRFTVELIPKLLPDVRKEKAIWQLEHATLLAKGIALGWET 2307 Query: 250 ---EIQRSQIARREY 261 IQ S + RR + Sbjct: 2308 INIPIQSSLLTRRNF 2322 >gi|47568269|ref|ZP_00238972.1| bsaE, putative [Bacillus cereus G9241] gi|47555097|gb|EAL13445.1| bsaE, putative [Bacillus cereus G9241] Length = 250 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Query: 80 IGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDRIIEIIQSIRRA 139 I + +S+ Y+ L+ Y W I ++ +SC+L+A D+K+ + I+ + S++R Sbjct: 31 IAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKDKKM----NNRSILSLPVSLKRV 86 Query: 140 F 140 + Sbjct: 87 W 87 >gi|251778548|ref|ZP_04821468.1| NLP/P60 protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082863|gb|EES48753.1| NLP/P60 protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 332 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 14/101 (13%) Query: 156 EQLLNDASKKIVFSSDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELEDILSRY 215 EQ LND KKI + EE QK D I +NI + L K QLV E DIL Sbjct: 148 EQKLNDMQKKI--EKENEEL----QKNKDEIEKNI-KELEDQKKQLVDYVQENSDILIDS 200 Query: 216 SIESIPLDLP-EMSQD------EAIKYINHVYLLGKWISRG 249 + IP+ LP ++S++ EA KY+ YL G G Sbjct: 201 TSSIIPITLPSDISEEARAIIKEAQKYLGIPYLWGGTTPEG 241 >gi|229197876|ref|ZP_04324592.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus m1293] gi|228585594|gb|EEK43696.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus m1293] Length = 250 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Query: 80 IGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDRIIEIIQSIRRA 139 I + +S+ Y+ L+ Y W I ++ +SC+L+A D+K+ + I+ + S++R Sbjct: 31 IAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKDKKM----NNRSILSLPVSLKRV 86 Query: 140 F 140 + Sbjct: 87 W 87 >gi|206977886|ref|ZP_03238774.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus cereus H3081.97] gi|217961185|ref|YP_002339753.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus cereus AH187] gi|229140404|ref|ZP_04268959.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus BDRD-ST26] gi|206743886|gb|EDZ55305.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus cereus H3081.97] gi|217062966|gb|ACJ77216.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus cereus AH187] gi|228642965|gb|EEK99241.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus BDRD-ST26] Length = 250 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Query: 80 IGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDRIIEIIQSIRRA 139 I + +S+ Y+ L+ Y W I ++ +SC+L+A D+K+ + I+ + S++R Sbjct: 31 IAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKDKKM----NNRSILSLPVSLKRV 86 Query: 140 F 140 + Sbjct: 87 W 87 >gi|228986910|ref|ZP_04147037.1| Lantibiotic permease protein spaE/mutE [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772859|gb|EEM21298.1| Lantibiotic permease protein spaE/mutE [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 250 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Query: 80 IGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDRIIEIIQSIRRA 139 I + +S+ Y+ L+ Y W I ++ +SC+L+A D+K+ + I+ + S++R Sbjct: 31 IAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKDKKM----NNRSILSLPVSLKRV 86 Query: 140 F 140 + Sbjct: 87 W 87 >gi|195129387|ref|XP_002009137.1| GI11425 [Drosophila mojavensis] gi|193920746|gb|EDW19613.1| GI11425 [Drosophila mojavensis] Length = 1983 Score = 35.8 bits (81), Expect = 6.7, Method: Composition-based stats. Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 22/159 (13%) Query: 115 TDDRKLRMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDI---QEQLLNDASKKIVFSSD 171 +D+++L+ ++ +++ ++Q + D K + ++ ++I QEQL A + V D Sbjct: 66 SDEKRLQ--DENEKLKRMVQKLENERDGLKNKNKELAAEIKQQQEQLRQAAQQADVSDKD 123 Query: 172 REEYIGLHQKQIDLIH--QNIDRHLAR-------MKNQLVAESDELEDILSRYSIESIPL 222 + + KQ L+H + ++H+ R ++NQ +A+S + +L ++ I Sbjct: 124 SSDPLSELDKQEHLLHNIETKNKHIKRLLREIDTLQNQNIAQSKTI--VLHEQELQQIRA 181 Query: 223 DLPEMSQDEAIKYINHVYLLGKWISRGEIQRS-QIARRE 260 +L ++SQD I V K + + E Q+S +IAR E Sbjct: 182 NLQQLSQD-----ITKVEQERKSLMQREQQQSLEIARLE 215 >gi|281355287|ref|ZP_06241781.1| Tetratricopeptide repeat protein [Victivallis vadensis ATCC BAA-548] gi|281318167|gb|EFB02187.1| Tetratricopeptide repeat protein [Victivallis vadensis ATCC BAA-548] Length = 940 Score = 35.8 bits (81), Expect = 6.7, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 14/109 (12%) Query: 134 QSIRRAFDQYKEEERKAL---SDIQEQLL-NDASKKIVFSSDREE------YIGLHQKQI 183 QS+RR +QYK++ + + D++ +L N AS+K V + RE+ Y L ++ Sbjct: 116 QSLRRELEQYKQKLSEIIVENDDLRRRLARNQASQKEVANLLREQRVMQEKYALLEKRYQ 175 Query: 184 DLIHQNI--DRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQD 230 DL Q++ D+ L ++NQL+ E E R + L ++ QD Sbjct: 176 DLERQSLEPDQRLTELRNQLIEEKLNAELTAKRLKVAETRLQ--KLDQD 222 Searching..................................................done Results from round 2 CONVERGED! >gi|254781075|ref|YP_003065488.1| hypothetical protein CLIBASIA_04885 [Candidatus Liberibacter asiaticus str. psy62] gi|254040752|gb|ACT57548.1| hypothetical protein CLIBASIA_04885 [Candidatus Liberibacter asiaticus str. psy62] Length = 266 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 266/266 (100%), Positives = 266/266 (100%) Query: 1 MWERIANTIVATSKKWSFLFAILSPTEVYNVHRRIWHLLRDDFGYFTKRTFFCFAFFITI 60 MWERIANTIVATSKKWSFLFAILSPTEVYNVHRRIWHLLRDDFGYFTKRTFFCFAFFITI Sbjct: 1 MWERIANTIVATSKKWSFLFAILSPTEVYNVHRRIWHLLRDDFGYFTKRTFFCFAFFITI 60 Query: 61 IYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKL 120 IYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKL Sbjct: 61 IYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKL 120 Query: 121 RMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQ 180 RMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQ Sbjct: 121 RMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQ 180 Query: 181 KQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEAIKYINHVY 240 KQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEAIKYINHVY Sbjct: 181 KQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEAIKYINHVY 240 Query: 241 LLGKWISRGEIQRSQIARREYIGYLQ 266 LLGKWISRGEIQRSQIARREYIGYLQ Sbjct: 241 LLGKWISRGEIQRSQIARREYIGYLQ 266 >gi|256843541|ref|ZP_05549029.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] gi|256614961|gb|EEU20162.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] Length = 792 Score = 40.7 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 103/244 (42%), Gaps = 35/244 (14%) Query: 1 MWERIANTIVATSKKWSFLFAILSPTEVYNVHRRIWHLLRDDFGYFTKRTFFCFAFFITI 60 M E + I A S +LF+ + YNV W L+ + FGY T+ +++ Sbjct: 125 MNELLMKIIAAGSSNNRYLFSFVK----YNVLDPFWKLIGNYFGYDTEEN-------VSL 173 Query: 61 IYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKL 120 + +F +F+ +L + + + +K+ L +++ F+ D K Sbjct: 174 LDLFNRLFVTYLANELSSKLPHKLQE----LVLKNKDNVQIFIDRF--------ADSNKY 221 Query: 121 RMIEDGDRIIEIIQSIRRAFDQYKEE--ERKALSDIQEQLLNDASKKIVFSSDREEYIGL 178 + D +S R D + ++ALSD+ + + D ++ + R +++G Sbjct: 222 QEYYDN-------ESTRVWVDLELHDLLVQEALSDLTQVTIFDEVNDLILAKIRSKFVGN 274 Query: 179 HQKQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLP--EMSQDEAIKYI 236 + + + ID+ L R +N A E E RY+ E + L +P E Q E +Y+ Sbjct: 275 QVTDYEQVLEIIDQMLKRTRNNF-ANRTENEYKFLRYAAELLNLRVPLVENWQKELSEYL 333 Query: 237 NHVY 240 ++ Y Sbjct: 334 DNEY 337 >gi|254781163|ref|YP_003065576.1| hypothetical protein CLIBASIA_05350 [Candidatus Liberibacter asiaticus str. psy62] gi|254040840|gb|ACT57636.1| hypothetical protein CLIBASIA_05350 [Candidatus Liberibacter asiaticus str. psy62] Length = 214 Score = 39.2 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 90/238 (37%), Gaps = 66/238 (27%) Query: 32 HRRIWHLLRD---DFGYFTKRTFF---CFAFFITIIYVFFPIFINFLISYIYKNIGYKIS 85 R++W LLR +F RTF C FF Y FF + Y +S Sbjct: 34 QRKLWSLLRYWSVEFWELLCRTFLWLLCLGFFTLFAYWFFG-----------EKFSYDVS 82 Query: 86 SQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDRIIEIIQSIRRAFDQYKE 145 + I + +L S ++ + + M +D ++ +I +I + QY E Sbjct: 83 IK-----------IVLAINVLLFSFVIALLGNPNIEMAKDIAQLFTLIDNIENGYGQYLE 131 Query: 146 EERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAES 205 + + ++++ N F + +EYI Sbjct: 132 --KISQKNVEKDFFNSK-----FFTHFKEYI----------------------------- 155 Query: 206 DELEDILSRYSIESIPLDLPEMSQDEAIKYINHVYLLGKWISRGEIQRSQIARREYIG 263 DE++ IL RY IE IP L + ++ Y+ H+ ++ + + I ++ R ++IG Sbjct: 156 DEVDKILMRYGIEGIP--LTDFDHEKIKSYLTHIKIVRDCLKKDNIHYAKELRNDWIG 211 >gi|262373387|ref|ZP_06066666.1| N-6 DNA methylase [Acinetobacter junii SH205] gi|262313412|gb|EEY94497.1| N-6 DNA methylase [Acinetobacter junii SH205] Length = 491 Score = 39.2 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 14/75 (18%) Query: 98 DIETFLALLYMSCILVATDDRKLRMIED-----------GDRIIEIIQSIRRAFDQYKEE 146 D E F AL ++ V DD + R++++ G I ++I I+R FD K + Sbjct: 87 DNELFPALQNLA---VENDDPRARVVQNVFADAYNYMKSGGLIRKVINQIQRGFDFNKSK 143 Query: 147 ERKALSDIQEQLLND 161 ER A DI EQLL D Sbjct: 144 ERHAFGDIYEQLLRD 158 >gi|251778548|ref|ZP_04821468.1| NLP/P60 protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082863|gb|EES48753.1| NLP/P60 protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 332 Score = 39.2 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 47/95 (49%), Gaps = 14/95 (14%) Query: 156 EQLLNDASKKIVFSSDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELEDILSRY 215 EQ LND KKI + EE QK D I +NI + L K QLV E DIL Sbjct: 148 EQKLNDMQKKI--EKENEEL----QKNKDEIEKNI-KELEDQKKQLVDYVQENSDILIDS 200 Query: 216 SIESIPLDLP-EMSQD------EAIKYINHVYLLG 243 + IP+ LP ++S++ EA KY+ YL G Sbjct: 201 TSSIIPITLPSDISEEARAIIKEAQKYLGIPYLWG 235 >gi|47222435|emb|CAG12955.1| unnamed protein product [Tetraodon nigroviridis] Length = 593 Score = 38.4 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 48/82 (58%), Gaps = 9/82 (10%) Query: 131 EIIQSIRRAFDQYKEEERKAL--------SDIQEQLLNDASKKIVFSSDREEYIGLHQKQ 182 E +++ +A +Q+++E++ AL ++QE L + S+ +S D+E+ + LH+ + Sbjct: 376 EKLRTFSQAQNQFEQEKKVALEELKGQHRQEVQELLRSHQSQNANYSKDQEKLVQLHKAE 435 Query: 183 IDLIHQNIDRHLARMKNQLVAE 204 +D + + +D L + K +LV E Sbjct: 436 VDSLSERVD-ELKQDKKRLVEE 456 >gi|262280000|ref|ZP_06057785.1| N-6 DNA methylase [Acinetobacter calcoaceticus RUH2202] gi|262260351|gb|EEY79084.1| N-6 DNA methylase [Acinetobacter calcoaceticus RUH2202] Length = 491 Score = 38.4 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 14/75 (18%) Query: 98 DIETFLALLYMSCILVATDDRKLRMIED-----------GDRIIEIIQSIRRAFDQYKEE 146 D E F AL ++ V DD + R++++ G I +II I++ FD K + Sbjct: 87 DNELFPALQNLA---VENDDPRARVVQNVFSDAYNYMKSGGLIRKIINQIQKGFDFNKSK 143 Query: 147 ERKALSDIQEQLLND 161 ER A DI EQLL D Sbjct: 144 ERHAFGDIYEQLLRD 158 >gi|118401391|ref|XP_001033016.1| hypothetical protein TTHERM_00471290 [Tetrahymena thermophila] gi|89287362|gb|EAR85353.1| hypothetical protein TTHERM_00471290 [Tetrahymena thermophila SB210] Length = 272 Score = 38.0 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 55/94 (58%), Gaps = 5/94 (5%) Query: 127 DRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKI--VFSSDREEYIGLHQKQID 184 ++IIE + + R Q +E+E K +S+ +E+ DA KI + ++E+ + + +++ Sbjct: 50 NQIIEQLSNSRLQLKQQREQEIKKVSESKEK---DAVSKILKIMEQNQEQLVEILDERVQ 106 Query: 185 LIHQNIDRHLARMKNQLVAESDELEDILSRYSIE 218 LI+QN++ L ++N++ SD+L + + + E Sbjct: 107 LINQNLEDKLLVLENKMDEISDKLREFENAFQDE 140 >gi|195129387|ref|XP_002009137.1| GI11425 [Drosophila mojavensis] gi|193920746|gb|EDW19613.1| GI11425 [Drosophila mojavensis] Length = 1983 Score = 38.0 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 22/159 (13%) Query: 115 TDDRKLRMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDI---QEQLLNDASKKIVFSSD 171 +D+++L+ ++ +++ ++Q + D K + ++ ++I QEQL A + V D Sbjct: 66 SDEKRLQ--DENEKLKRMVQKLENERDGLKNKNKELAAEIKQQQEQLRQAAQQADVSDKD 123 Query: 172 REEYIGLHQKQIDLIH--QNIDRHLAR-------MKNQLVAESDELEDILSRYSIESIPL 222 + + KQ L+H + ++H+ R ++NQ +A+S + +L ++ I Sbjct: 124 SSDPLSELDKQEHLLHNIETKNKHIKRLLREIDTLQNQNIAQSKTI--VLHEQELQQIRA 181 Query: 223 DLPEMSQDEAIKYINHVYLLGKWISRGEIQRS-QIARRE 260 +L ++SQD I V K + + E Q+S +IAR E Sbjct: 182 NLQQLSQD-----ITKVEQERKSLMQREQQQSLEIARLE 215 >gi|30263772|ref|NP_846149.1| bacteriocin ABC transporter, permease protein subunit, putative [Bacillus anthracis str. Ames] gi|47529191|ref|YP_020540.1| bacteriocin ABC transporter permease protein subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49186616|ref|YP_029868.1| bacteriocin ABC transporter permease subunit [Bacillus anthracis str. Sterne] gi|165872395|ref|ZP_02217030.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0488] gi|167635830|ref|ZP_02394139.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0442] gi|167639807|ref|ZP_02398076.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0193] gi|170687833|ref|ZP_02879047.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0465] gi|170706793|ref|ZP_02897251.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0389] gi|177652078|ref|ZP_02934624.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0174] gi|190568424|ref|ZP_03021331.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis Tsiankovskii-I] gi|227813326|ref|YP_002813335.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. CDC 684] gi|229601189|ref|YP_002868008.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0248] gi|254683525|ref|ZP_05147385.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. CNEVA-9066] gi|254735806|ref|ZP_05193512.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. Western North America USA6153] gi|254739668|ref|ZP_05197362.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. Kruger B] gi|254751064|ref|ZP_05203103.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. Vollum] gi|254759382|ref|ZP_05211407.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. Australia 94] gi|30258416|gb|AAP27635.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. Ames] gi|47504339|gb|AAT33015.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49180543|gb|AAT55919.1| bacteriocin ABC transporter, permease protein subunit, putative [Bacillus anthracis str. Sterne] gi|164711833|gb|EDR17375.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0488] gi|167512208|gb|EDR87585.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0193] gi|167528787|gb|EDR91545.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0442] gi|170128211|gb|EDS97080.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0389] gi|170668149|gb|EDT18898.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0465] gi|172082447|gb|EDT67512.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0174] gi|190560428|gb|EDV14406.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis Tsiankovskii-I] gi|227003716|gb|ACP13459.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. CDC 684] gi|229265597|gb|ACQ47234.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A0248] Length = 250 Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 69 INFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDR 128 + +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D+K+ + Sbjct: 20 LTWLVPFATMLIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKDKKM----NNRS 75 Query: 129 IIEIIQSIRRAF 140 I+ + S++R + Sbjct: 76 ILSLPASLKRVW 87 >gi|65321092|ref|ZP_00394051.1| COG4200: Uncharacterized protein conserved in bacteria [Bacillus anthracis str. A2012] Length = 501 Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 69 INFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDR 128 + +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D+K+ + Sbjct: 20 LTWLVPFATMLIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKDKKM----NNRS 75 Query: 129 IIEIIQSIRRAF 140 I+ + S++R + Sbjct: 76 ILSLPASLKRVW 87 >gi|254722046|ref|ZP_05183835.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus anthracis str. A1055] Length = 250 Score = 37.3 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 69 INFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDGDR 128 + +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D+K+ + Sbjct: 20 LTWLVPFATMLIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKDKKM----NNRS 75 Query: 129 IIEIIQSIRRAF 140 I+ + S++R + Sbjct: 76 ILSLPVSLKRVW 87 >gi|238798452|ref|ZP_04641932.1| Efflux transporter, RND family, MFP subunit [Yersinia mollaretii ATCC 43969] gi|238717690|gb|EEQ09526.1| Efflux transporter, RND family, MFP subunit [Yersinia mollaretii ATCC 43969] Length = 396 Score = 37.3 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 18/113 (15%) Query: 124 EDGDRIIEIIQSI-----------RRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSD- 171 E G ++IEI++ R + + E ++DI EQ N + K+ D Sbjct: 57 ERGGKVIEIVKPAFARIVKGDVIARLSNYDFMLETTSKMADITEQTNNLRNMKMRLEQDN 116 Query: 172 REEYIGLH--QKQIDLIHQNIDRHLARMKNQLVAESDELE---DILSRYSIES 219 R+ + L Q Q+++I +N+ RH A KN L+A+S E+E D+ + I+S Sbjct: 117 RDTKVNLQEAQHQLEIISKNLARHQALDKNSLIAKS-EVEYQLDLFRHWKIKS 168 >gi|301055256|ref|YP_003793467.1| putative transporter protein [Bacillus anthracis CI] gi|300377425|gb|ADK06329.1| predicted transporter protein [Bacillus cereus biovar anthracis str. CI] Length = 250 Score = 36.9 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%) Query: 58 ITIIYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDD 117 I I + F I +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D Sbjct: 10 IKIRHTFLNKLI-WLVPFATMLIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKD 68 Query: 118 RKLRMIEDGDRIIEIIQSIRRAF 140 +K+ + I+ + S++R + Sbjct: 69 KKM----NNRSILSLPVSLKRVW 87 >gi|196038333|ref|ZP_03105642.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus cereus NVH0597-99] gi|228916404|ref|ZP_04079971.1| Lantibiotic permease protein spaE/mutE [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229092804|ref|ZP_04223942.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus Rock3-42] gi|196030741|gb|EDX69339.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus cereus NVH0597-99] gi|228690602|gb|EEL44383.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus Rock3-42] gi|228843207|gb|EEM88288.1| Lantibiotic permease protein spaE/mutE [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 250 Score = 36.9 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%) Query: 58 ITIIYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDD 117 I I + F I +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D Sbjct: 10 IKIRHTFLNKLI-WLVPFATMLIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKD 68 Query: 118 RKLRMIEDGDRIIEIIQSIRRAF 140 +K+ + I+ + S++R + Sbjct: 69 KKM----NNRSILSLPVSLKRVW 87 >gi|145553058|ref|XP_001462204.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124430042|emb|CAK94831.1| unnamed protein product [Paramecium tetraurelia] Length = 390 Score = 36.9 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 24/142 (16%) Query: 125 DGDRIIEIIQSIRRAFDQYKEE---ERKALSDIQEQLLNDASK-KIVFSSDREEYIGLHQ 180 D D ++E IQS R ++Q K+ + +LS+ ++ + N + K +F+S++EE I Q Sbjct: 258 DIDAVLEAIQS-REKYEQIKQNYLTKLCSLSNEKKDIENGKTTLKSLFNSNKEELIQKTQ 316 Query: 181 KQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEAIKYINHVY 240 +QID I + I+ QL D + I+ + LP Q++ Y Y Sbjct: 317 QQIDNIQKEIE--------QLTILCDMITIIIGYFI-------LPTYKQEKEKNY----Y 357 Query: 241 LLGKWISRGEIQRSQIARREYI 262 L K +++ ++Q++Q R ++ Sbjct: 358 QLLKQMAQHQVQKAQAERNYWL 379 >gi|19074483|ref|NP_585989.1| RAD50-LIKE DNA REPAIR PROTEIN [Encephalitozoon cuniculi GB-M1] gi|74697545|sp|Q8SRK6|RAD50_ENCCU RecName: Full=DNA repair protein RAD50 gi|19069125|emb|CAD25593.1| RAD50-LIKE DNA REPAIR PROTEIN [Encephalitozoon cuniculi GB-M1] Length = 1247 Score = 36.9 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 15/118 (12%) Query: 117 DRKLRMIEDGDRIIEI---IQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDRE 173 D KLR E+G+ + E+ + IR+ +++ KEE R+ +E++ K+ V ++RE Sbjct: 775 DGKLRGSEEGESVQELRSMVDGIRKIYEEKKEEVRRK----KERIEYLCRKQEVIRAERE 830 Query: 174 --EYIGLHQKQIDLIHQNIDRHLARMKNQLVAES-----DELEDILSRYSIESIPLDL 224 E I ++ + + Q I+R AR++ V E +L+ IL R++ + + L++ Sbjct: 831 IREKINFREEAKEAM-QRIERSSARIRASDVEEEIRRKKSKLDRILERFARKRVELEM 887 >gi|268581715|ref|XP_002645841.1| Hypothetical protein CBG07574 [Caenorhabditis briggsae] gi|187033313|emb|CAP27549.1| hypothetical protein CBG_07574 [Caenorhabditis briggsae AF16] Length = 283 Score = 36.9 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 3/61 (4%) Query: 116 DDRKLRMIEDGDRIIEIIQSIRRAFDQYKE---EERKALSDIQEQLLNDASKKIVFSSDR 172 ++ K R +E R+ E+ R+AF+Q+KE E+K L+ + +Q+ ++ K + + D+ Sbjct: 150 EELKTRKVEVARRLQELTPEARKAFEQWKELRLNEKKFLAGLSKQIRDELKKMFITAKDK 209 Query: 173 E 173 E Sbjct: 210 E 210 >gi|296211780|ref|XP_002752557.1| PREDICTED: keratin, type I cytoskeletal 18 [Callithrix jacchus] Length = 431 Score = 36.9 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 46/90 (51%) Query: 129 IIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQKQIDLIHQ 188 + +I+ IR +D+ + R+ L QL+ +++ + S E G+ ++ Q Sbjct: 245 LAKIMAEIRAQYDELARKNREELDKYWTQLIEESTTIVTTQSTEVETAGMTLTELRRTVQ 304 Query: 189 NIDRHLARMKNQLVAESDELEDILSRYSIE 218 +++ L M+N ++ + L ++ +RY+++ Sbjct: 305 SLEIDLDSMRNTKISLENSLREVEARYALQ 334 >gi|321457735|gb|EFX68816.1| hypothetical protein DAPPUDRAFT_329741 [Daphnia pulex] Length = 715 Score = 36.9 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 24/103 (23%) Query: 113 VATDDRKLRM-IEDGDRII--EIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFS 169 +A DD +LR +ED DRII I+ R D KE LS +Q QL + +SK +F Sbjct: 212 LANDDTRLRRKVEDRDRIIASSAIEKNRIVLD--KERLENELSLLQSQLTDSSSKLQMF- 268 Query: 170 SDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELEDIL 212 QN+ LA KN+L E+ +IL Sbjct: 269 ------------------QNVHDELATTKNELENNKREMTEIL 293 >gi|332025450|gb|EGI65615.1| Dynein heavy chain 2, axonemal [Acromyrmex echinatior] Length = 4298 Score = 36.5 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 11/96 (11%) Query: 77 YKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIE------DGDRII 130 YK + Y+I+S + +LT ++W D++T LY++ L D MIE D R+ Sbjct: 218 YKTLYYEIASAHINLTHHSW-DLDTENIFLYINVFLGRCQD----MIEICQAMIDFARLD 272 Query: 131 EIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKI 166 E Q + F EE + + E+L DA KI Sbjct: 273 ETTQILSPKFSGTNGEEHERICQKIERLFYDALSKI 308 >gi|399137|sp|P30996|BXF_CLOBO RecName: Full=Botulinum neurotoxin type F; Short=BoNT/F; AltName: Full=Bontoxilysin-F; Contains: RecName: Full=Botulinum neurotoxin F light chain; Contains: RecName: Full=Botulinum neurotoxin F heavy chain; Flags: Precursor gi|144867|gb|AAA23263.1| neurotoxin type F [Clostridium botulinum] gi|383771|prf||1904210A neurotoxin F Length = 1274 Score = 36.5 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 93/202 (46%), Gaps = 27/202 (13%) Query: 66 PIFINFLI-SYI--YKNIGYKISSQYYSLTEY--TWHDIETFLALLYMSCILVATDDRKL 120 P+ + F I SYI Y+N I + SL E W +I +++ +++ I + RK Sbjct: 661 PVILVFTIKSYIDSYENKNKAIKAINNSLIEREAKWKEIYSWIVSNWLTRINTQFNKRKE 720 Query: 121 RMIEDGDRIIEIIQS-IRRAFDQYKEEERKAL------SDIQEQL--------------L 159 +M + ++ I++ I ++ Y +E+ L ++I+E+L + Sbjct: 721 QMYQALQNQVDAIKTAIEYKYNNYTSDEKNRLESEYNINNIEEELNKKVSLAMKNIERFM 780 Query: 160 NDASKKIVFSSDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIES 219 ++S + E +G +K + + ++ ++ ++ L +++EL D+++ S Sbjct: 781 TESSISYLMKLINEAKVGKLKKYDNHVKSDLLNYILDHRSILGEQTNELSDLVTSTLNSS 840 Query: 220 IPLDLPEMSQDEA-IKYINHVY 240 IP +L + D+ I Y N +Y Sbjct: 841 IPFELSSYTNDKILIIYFNRLY 862 >gi|282160593|gb|ADA79576.1| botulinum neurotoxin type F [Clostridium botulinum] gi|282160595|gb|ADA79577.1| botulinum neurotoxin type F [Clostridium botulinum] gi|316925157|gb|ADU57954.1| botulinum neurotoxin subtype F6 [Clostridium botulinum] Length = 1275 Score = 36.5 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 93/202 (46%), Gaps = 27/202 (13%) Query: 66 PIFINFLI-SYI--YKNIGYKISSQYYSLTEY--TWHDIETFLALLYMSCILVATDDRKL 120 P+ + F I SYI Y+N I + SL E W +I +++ +++ I + RK Sbjct: 662 PVILVFTIKSYIDSYENKNKAIKAINNSLIEREAKWKEIYSWIVSNWLTRINTQFNKRKE 721 Query: 121 RMIEDGDRIIEIIQS-IRRAFDQYKEEERKAL------SDIQEQL--------------L 159 +M + ++ I++ I ++ Y +E+ L ++I+E+L + Sbjct: 722 QMYQALQNQVDAIKTAIEYKYNNYTSDEKNRLESEYNINNIEEELNKKVSLAMKNIERFM 781 Query: 160 NDASKKIVFSSDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIES 219 ++S + E +G +K + + ++ ++ ++ L +++EL D+++ S Sbjct: 782 TESSISYLMKLINEAKVGKLKKYDNHVKSDLLNYILDHRSILGEQTNELSDLVTSTLNSS 841 Query: 220 IPLDLPEMSQDEA-IKYINHVY 240 IP +L + D+ I Y N +Y Sbjct: 842 IPFELSSYTNDKILIIYFNRLY 863 >gi|282160589|gb|ADA79574.1| botulinum neurotoxin type F [Clostridium botulinum] gi|282160597|gb|ADA79578.1| botulinum neurotoxin type F [Clostridium botulinum] Length = 1275 Score = 36.5 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 93/202 (46%), Gaps = 27/202 (13%) Query: 66 PIFINFLI-SYI--YKNIGYKISSQYYSLTEY--TWHDIETFLALLYMSCILVATDDRKL 120 P+ + F I SYI Y+N I + SL E W +I +++ +++ I + RK Sbjct: 662 PVILVFTIKSYIDSYENKNKAIKAINNSLIEREAKWKEIYSWIVSNWLTRINTQFNKRKE 721 Query: 121 RMIEDGDRIIEIIQS-IRRAFDQYKEEERKAL------SDIQEQL--------------L 159 +M + ++ I++ I ++ Y +E+ L ++I+E+L + Sbjct: 722 QMYQALQNQVDAIKTAIEYKYNNYTSDEKNRLESEYNINNIEEELNKKVSLAMKNIERFM 781 Query: 160 NDASKKIVFSSDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIES 219 ++S + E +G +K + + ++ ++ ++ L +++EL D+++ S Sbjct: 782 TESSISYLMKLINEAKVGKLKKYDNHVKSDLLNYILDHRSILGEQTNELSDLVTSTLNSS 841 Query: 220 IPLDLPEMSQDEA-IKYINHVY 240 IP +L + D+ I Y N +Y Sbjct: 842 IPFELSSYTNDKILIIYFNRLY 863 >gi|327284018|ref|XP_003226736.1| PREDICTED: peroxisomal proliferator-activated receptor A-interacting complex 285 kDa protein-like [Anolis carolinensis] Length = 2825 Score = 36.5 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 10/75 (13%) Query: 193 HLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEAIKYINHVYLLGKWISRG--- 249 H MK V E+ SR+++E IP LP++ +++AI + H LL K I+ G Sbjct: 2252 HFMSMKTIPV----EVTQASSRFTVELIPKLLPDVRKEKAIWQLEHATLLAKGIALGWET 2307 Query: 250 ---EIQRSQIARREY 261 IQ S + RR + Sbjct: 2308 INIPIQSSLLTRRNF 2322 >gi|330860467|emb|CBX70773.1| hypothetical protein YEW_AR03700 [Yersinia enterocolitica W22703] Length = 357 Score = 36.5 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 29/158 (18%) Query: 124 EDGDRIIEIIQSIRRAFDQYKEEERKAL--------------SDIQEQLLNDASKKIVFS 169 E G ++IEI ++ AF+ K+ E AL +DI EQ+ N + KI Sbjct: 18 EHGGKVIEINKA---AFESVKKGETIALLANYDFMLEATSRMADITEQINNLRNMKIQLE 74 Query: 170 SD-REEYIGLH--QKQIDLIHQNIDRHLARMKNQLVAESDELE---DILSRYSIESIPL- 222 D R+ + L Q Q+ ++ +N+ RH A K ++A+S ELE D+L + ++S L Sbjct: 75 QDARDTKLRLQEAQHQVMVMTKNLIRHQALDKKSMIAKS-ELEHQKDMLQNWKMQSEILM 133 Query: 223 ---DLPEMSQDEAIKYIN-HVYLLGKWISRGEIQRSQI 256 + E S E K IN ++LL + I E Q+ Sbjct: 134 EHNNKNEKSFPEQFKNINDSIFLLERMIKMVESGMEQL 171 >gi|332161077|ref|YP_004297654.1| hypothetical protein YE105_C1455 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604955|emb|CBY26453.1| putative exported protein precursor [Yersinia enterocolitica subsp. palearctica Y11] gi|325665307|gb|ADZ41951.1| hypothetical protein YE105_C1455 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 420 Score = 36.5 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 29/158 (18%) Query: 124 EDGDRIIEIIQSIRRAFDQYKEEERKAL--------------SDIQEQLLNDASKKIVFS 169 E G ++IEI ++ AF+ K+ E AL +DI EQ+ N + KI Sbjct: 81 EHGGKVIEINKA---AFESVKKGETIALLANYDFMLEATSRMADITEQINNLRNMKIQLE 137 Query: 170 SD-REEYIGLH--QKQIDLIHQNIDRHLARMKNQLVAESDELE---DILSRYSIESIPL- 222 D R+ + L Q Q+ ++ +N+ RH A K ++A+S ELE D+L + ++S L Sbjct: 138 QDARDTKLRLQEAQHQVMVMTKNLIRHQALDKKSMIAKS-ELEHQKDMLQNWKMQSEILM 196 Query: 223 ---DLPEMSQDEAIKYIN-HVYLLGKWISRGEIQRSQI 256 + E S E K IN ++LL + I E Q+ Sbjct: 197 EHNNKNEKSFPEQFKNINDSIFLLERMIKMVESGMEQL 234 >gi|228986910|ref|ZP_04147037.1| Lantibiotic permease protein spaE/mutE [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772859|gb|EEM21298.1| Lantibiotic permease protein spaE/mutE [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 250 Score = 36.5 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%) Query: 58 ITIIYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDD 117 I I + F I +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D Sbjct: 10 IKIRHTFLNKLI-WLVPFATILIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKD 68 Query: 118 RKLRMIEDGDRIIEIIQSIRRAF 140 +K+ + I+ + S++R + Sbjct: 69 KKM----NNRSILSLPVSLKRVW 87 >gi|229197876|ref|ZP_04324592.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus m1293] gi|228585594|gb|EEK43696.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus m1293] Length = 250 Score = 36.5 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%) Query: 58 ITIIYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDD 117 I I + F I +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D Sbjct: 10 IKIRHTFLNKLI-WLVPFATILIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKD 68 Query: 118 RKLRMIEDGDRIIEIIQSIRRAF 140 +K+ + I+ + S++R + Sbjct: 69 KKM----NNRSILSLPVSLKRVW 87 >gi|206977886|ref|ZP_03238774.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus cereus H3081.97] gi|217961185|ref|YP_002339753.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus cereus AH187] gi|229140404|ref|ZP_04268959.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus BDRD-ST26] gi|206743886|gb|EDZ55305.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus cereus H3081.97] gi|217062966|gb|ACJ77216.1| putative bacteriocin ABC transporter, permease protein subunit [Bacillus cereus AH187] gi|228642965|gb|EEK99241.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus BDRD-ST26] Length = 250 Score = 36.5 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%) Query: 58 ITIIYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDD 117 I I + F I +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D Sbjct: 10 IKIRHTFLNKLI-WLVPFATILIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKD 68 Query: 118 RKLRMIEDGDRIIEIIQSIRRAF 140 +K+ + I+ + S++R + Sbjct: 69 KKM----NNRSILSLPVSLKRVW 87 >gi|47568269|ref|ZP_00238972.1| bsaE, putative [Bacillus cereus G9241] gi|47555097|gb|EAL13445.1| bsaE, putative [Bacillus cereus G9241] Length = 250 Score = 36.5 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%) Query: 58 ITIIYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDD 117 I I + F I +L+ + I + +S+ Y+ L+ Y W I ++ +SC+L+A D Sbjct: 10 IKIRHTFLNKLI-WLVPFATILIAFLLSADYFQLSSYNWWYITMLPGMVSLSCVLLAEKD 68 Query: 118 RKLRMIEDGDRIIEIIQSIRRAF 140 +K+ + I+ + S++R + Sbjct: 69 KKM----NNRSILSLPVSLKRVW 87 >gi|118404058|ref|NP_001072214.1| RUN and FYVE domain containing 3 [Xenopus (Silurana) tropicalis] gi|110645492|gb|AAI18784.1| RUN and FYVE domain containing 3 [Xenopus (Silurana) tropicalis] Length = 469 Score = 36.5 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 64/127 (50%), Gaps = 10/127 (7%) Query: 112 LVATDDRKLRMIEDGDRIIEIIQSIRRAFDQYKEEER----KALSDIQEQLLNDASKKIV 167 L ++R + M E+ +RI E A + ++ER +ALS++++ L + ++ Sbjct: 299 LAVANNRIITMQEEMERIKEETSYYSEASKKVNKQERTADGQALSEVKKHLKEETQLRLD 358 Query: 168 FSSDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELEDILS-----RYSIESIPL 222 + E IG+ Q +++L + +D+ + ++ L A +L+D+ + + ++S L Sbjct: 359 IEKELEVQIGMRQ-EMELAMKMLDKDVCEKQDALAALRQQLDDLRALKHELSFKLQSSDL 417 Query: 223 DLPEMSQ 229 L + S+ Sbjct: 418 ALKQKSE 424 >gi|288555018|ref|YP_003426953.1| two-component sensor histidine kinase [Bacillus pseudofirmus OF4] gi|288546178|gb|ADC50061.1| two-component sensor histidine kinase [Bacillus pseudofirmus OF4] Length = 376 Score = 36.5 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 20/160 (12%) Query: 9 IVATSKKWSFLFAILSPTEVYNVHRRIWHLLRDDFGYFTKRTFFCFAFFITIIY--VFFP 66 I +S W +F IL ++ V R+ + + Y + +T+ Y V+F Sbjct: 30 IFRSSSLWEIIFGILMIV-LFFVSYRLSFITKGGLVYLWVSIEMAISIGMTLFYGYVYFA 88 Query: 67 IFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKLRMIEDG 126 IF+ F I I G+ +T Y H + T +A+ IL ++L + + Sbjct: 89 IFLAFFIGNIQSKGGF--------ITLYVVHLVTTIIAV-----ILSFFTQQELFLAQFP 135 Query: 127 DRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKI 166 II +I I F+ Y +R+ L E L DA+K+I Sbjct: 136 FIIISVIGVILLPFNTYNRNKREKL----EGQLEDANKRI 171 >gi|302389068|ref|YP_003824889.1| hypothetical protein Toce_0490 [Thermosediminibacter oceani DSM 16646] gi|302199696|gb|ADL07266.1| hypothetical protein Toce_0490 [Thermosediminibacter oceani DSM 16646] Length = 547 Score = 36.5 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 12/96 (12%) Query: 133 IQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQKQIDLIHQN--- 189 IQS +F+++ E+ + L QE +L+ K R+E++GL + ++ + + Sbjct: 368 IQSTIHSFEEFLTEDLETLRKEQEAILSAHQKA------RQEWMGLLEHELKEMPEKRGA 421 Query: 190 ---IDRHLARMKNQLVAESDELEDILSRYSIESIPL 222 + +L +N+L+A+ +E E I+SR E++ L Sbjct: 422 VLRVTTYLQEDRNRLLAKVNEQEYIISRLESENVAL 457 >gi|295693284|ref|YP_003601894.1| hypothetical protein LCRIS_01422 [Lactobacillus crispatus ST1] gi|295031390|emb|CBL50869.1| putative protein without homology [Lactobacillus crispatus ST1] Length = 792 Score = 36.1 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 35/244 (14%) Query: 1 MWERIANTIVATSKKWSFLFAILSPTEVYNVHRRIWHLLRDDFGYFTKRTFFCFAFFITI 60 M E + I A S +LF+ YNV W ++ FGY T+ +++ Sbjct: 125 MNELLMKIIAAGSFNNRYLFSFAK----YNVLDPFWKMVGSYFGYDTEEN-------VSL 173 Query: 61 IYVFFPIFINFLISYIYKNIGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKL 120 + +F +F+ +L + + + +K+ L +++ F+ D K Sbjct: 174 LDLFNRLFVTYLANELSSKLPHKLQE----LVLKNKDNVQIFIDRF--------ADSNKY 221 Query: 121 RMIEDGDRIIEIIQSIRRAFDQYKEE--ERKALSDIQEQLLNDASKKIVFSSDREEYIGL 178 + D +S R D + ++ALSD+ + + D ++ + R +++G Sbjct: 222 QEYYDN-------ESTRVWVDLELHDLLVQEALSDLTQVTIFDEVNDLILAKIRSKFVGN 274 Query: 179 HQKQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLP--EMSQDEAIKYI 236 + + + ID+ L R +N ++ L RY+ E + L +P E Q E +Y+ Sbjct: 275 QVTDYEQVLEIIDQMLKRTRNNFTNRTENEYKFL-RYAAELLNLRVPLVENWQKELSEYL 333 Query: 237 NHVY 240 ++ Y Sbjct: 334 DNEY 337 >gi|229162701|ref|ZP_04290658.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus R309803] gi|228620583|gb|EEK77452.1| Lantibiotic permease protein spaE/mutE [Bacillus cereus R309803] Length = 222 Score = 36.1 bits (82), Expect = 4.7, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%) Query: 80 IGYKISSQYYSLTEYTWHDIETFLALLYMSCILVATDDRKL 120 I + +S Y+ L+ Y W I L+ +SC+L+A D+K+ Sbjct: 3 IAFLLSRDYFQLSSYNWWYITMLPGLISLSCVLLAEKDKKM 43 >gi|327274270|ref|XP_003221901.1| PREDICTED: protein RUFY3-like [Anolis carolinensis] Length = 600 Score = 36.1 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 59/105 (56%), Gaps = 6/105 (5%) Query: 112 LVATDDRKLRMIEDGDRIIE----IIQSIRR-AFDQYKEEERKALSDIQEQLLNDASKKI 166 L ++R + + ED +R+ E I++S R+ A Q + + +ALS+ ++QL + ++ Sbjct: 299 LAVANNRIITLQEDMERVKEESSYILESNRKQAPKQDRTSDGQALSEARKQLKEETQLRL 358 Query: 167 VFSSDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELEDI 211 + E IG+ Q +++L + +++ + ++ LVA +L+D+ Sbjct: 359 DVEKELEVQIGMRQ-EMELAMKMLEKDVCEKQDALVALRQQLDDL 402 >gi|188588564|ref|YP_001921397.1| putative surface antigen [Clostridium botulinum E3 str. Alaska E43] gi|188498845|gb|ACD51981.1| putative surface antigen [Clostridium botulinum E3 str. Alaska E43] Length = 333 Score = 36.1 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 14/95 (14%) Query: 156 EQLLNDASKKIVFSSDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELEDILSRY 215 EQ LND KKI + EE QK D I +NI + L K QLV E DIL Sbjct: 148 EQKLNDMQKKI--EKENEEL----QKNKDQIEKNI-KELEDQKKQLVDYVQENSDILIDS 200 Query: 216 SIESIPLDL-PEMSQD------EAIKYINHVYLLG 243 + IP+ L ++S++ EA KY+ YL G Sbjct: 201 TSSIIPITLSSDISEEARAIIKEAQKYLGIPYLWG 235 >gi|261823051|ref|YP_003261157.1| diguanylate cyclase [Pectobacterium wasabiae WPP163] gi|261607064|gb|ACX89550.1| diguanylate cyclase [Pectobacterium wasabiae WPP163] Length = 526 Score = 36.1 bits (82), Expect = 5.3, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 48/116 (41%), Gaps = 22/116 (18%) Query: 133 IQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQKQIDLIHQNIDR 192 I ++R + + E A SD +LLN V Y + QK +I +IDR Sbjct: 351 IDLLQRKIGKLRSE---AHSDPMTELLNRRGLDSVL-----RYWQMGQKSFAVIALDIDR 402 Query: 193 H--------------LARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEAIK 234 + R +QL+ S DIL R E + LPE SQDEAIK Sbjct: 403 FKRINDTHGHDVGDTVIRYLSQLIRTSSREADILCRSGGEEFLILLPETSQDEAIK 458 >gi|325115486|emb|CBZ51041.1| xenopus 14s cohesin smc1 subunit, related [Neospora caninum Liverpool] Length = 1652 Score = 36.1 bits (82), Expect = 5.4, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%) Query: 133 IQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQKQIDLIH----Q 188 +Q+ R +++ EE++K L+ +Q QL ++ + R++ I Q+ +D IH Q Sbjct: 1007 LQAKARVWEEQAEEKQKKLTRVQAQLQALRERE----AARKQEITAKQQDLDEIHASLLQ 1062 Query: 189 NIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEA 232 RH AR+ + LE R +E++ +L + E+ Sbjct: 1063 QQQRHFARLDEAVGRAHVHLEQRRRRQRVEALKTELASLHAQES 1106 >gi|281355287|ref|ZP_06241781.1| Tetratricopeptide repeat protein [Victivallis vadensis ATCC BAA-548] gi|281318167|gb|EFB02187.1| Tetratricopeptide repeat protein [Victivallis vadensis ATCC BAA-548] Length = 940 Score = 35.7 bits (81), Expect = 5.9, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 14/109 (12%) Query: 134 QSIRRAFDQYKEEERKAL---SDIQEQLL-NDASKKIVFSSDREE------YIGLHQKQI 183 QS+RR +QYK++ + + D++ +L N AS+K V + RE+ Y L ++ Sbjct: 116 QSLRRELEQYKQKLSEIIVENDDLRRRLARNQASQKEVANLLREQRVMQEKYALLEKRYQ 175 Query: 184 DLIHQNI--DRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQD 230 DL Q++ D+ L ++NQL+ E E R + L ++ QD Sbjct: 176 DLERQSLEPDQRLTELRNQLIEEKLNAELTAKRLKVAETRLQ--KLDQD 222 >gi|168032704|ref|XP_001768858.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679970|gb|EDQ66411.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1199 Score = 35.7 bits (81), Expect = 6.0, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 18/116 (15%) Query: 98 DIETFLALLYMSCILVATD----DRKLRMIEDGDRIIEIIQSIRRAFDQYKEEERKALSD 153 +IE+ A M+ ++V + D+++R++ + +E Q+ RR + E +K LS Sbjct: 924 NIESLAAHARMAELVVKLEQQAIDQRMRVVTEITTELERSQAGRR---EDNEHFQKCLSR 980 Query: 154 IQEQLLNDASKKIVFSSDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELE 209 +Q++ +++REE + K ++ I + DRH+ K Q+VA S E + Sbjct: 981 LQKE-----------TAEREEALRKQMKYVEEIAKYKDRHIEHRKFQMVATSHEFQ 1025 >gi|196014984|ref|XP_002117350.1| hypothetical protein TRIADDRAFT_32405 [Trichoplax adhaerens] gi|190580103|gb|EDV20189.1| hypothetical protein TRIADDRAFT_32405 [Trichoplax adhaerens] Length = 499 Score = 35.7 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 8/93 (8%) Query: 121 RMIEDGDRIIEII-QSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLH 179 R+++ D I++ + + + A +QY+ R L ++ E + S+ +S + EY Sbjct: 95 RVVDRKDAIVKSLGKDLEEAEEQYQMALRSHLQNMDELIALQHSR---LTSVKSEY---- 147 Query: 180 QKQIDLIHQNIDRHLARMKNQLVAESDELEDIL 212 KQ++++ Q D + M NQ E DEL DI+ Sbjct: 148 DKQLEILKQEFDSERSSMINQNKKECDELTDIM 180 >gi|325186880|emb|CCA21425.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 1630 Score = 35.7 bits (81), Expect = 7.1, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 18/140 (12%) Query: 117 DRKLRMIEDGDRIIEIIQ---SIRRAFDQYKE---EERKALSDIQEQLLNDASKKIVFSS 170 D +R+ E+ D E I+ S R+ ++ K E K ++DIQ+QL ++ + + Sbjct: 1192 DEVVRLQEEFDSHHERIKYEISFRKETEELKRIEFETEKRITDIQQQLQSEERVQRL--- 1248 Query: 171 DREEYI--GLHQKQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMS 228 R+EYI HQ+ +DL ++ K + E ++ D LS+Y + + + Sbjct: 1249 -RQEYITRAKHQELVDL------QNFGNWKREDEREEKQVTDKLSKYEHDVLESQEHAIR 1301 Query: 229 QDEAIKYINHVYLLGKWISR 248 Q KY++H+ + K + + Sbjct: 1302 QTLEDKYVDHILIKEKGLQK 1321 >gi|292625219|ref|XP_688661.4| PREDICTED: protein ERGIC-53 [Danio rerio] Length = 503 Score = 35.7 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 9/123 (7%) Query: 124 EDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQKQI 183 E+ D+ E ++ ++A D+ KEE +K D+Q Q + D + + R+ + G Q +I Sbjct: 277 EEKDKYQEEFENFQQALDKRKEEFQKEHPDVQGQPIEDLYESVNDREIRQVFEG--QNRI 334 Query: 184 DLIHQNIDRHLARMKNQ----LVAESDELEDILSRYSIESIP---LDLPEMSQDEAIKYI 236 L + ++R LA + ++ + +DE+ S+ P L+ +Q E +K I Sbjct: 335 HLEIKQLNRQLAMILDEQRRYVSVITDEINKRTSQAQSGQAPSHELETIITTQHEVLKNI 394 Query: 237 NHV 239 N V Sbjct: 395 NEV 397 >gi|61402497|gb|AAH91860.1| Lman1 protein [Danio rerio] Length = 497 Score = 35.7 bits (81), Expect = 7.5, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 9/123 (7%) Query: 124 EDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQKQI 183 E+ D+ E ++ ++A D+ KEE +K D+Q Q + D + + R+ + G Q +I Sbjct: 271 EEKDKYQEEFENFQQALDKRKEEFQKEHPDVQGQPIEDLYESVNDREIRQVFEG--QNRI 328 Query: 184 DLIHQNIDRHLARMKNQ----LVAESDELEDILSRYSIESIP---LDLPEMSQDEAIKYI 236 L + ++R LA + ++ + +DE+ S+ P L+ +Q E +K I Sbjct: 329 HLEIKQLNRQLAMILDEQRRYVSVITDEINKRTSQAQSGQAPSHELETIITTQHEVLKNI 388 Query: 237 NHV 239 N V Sbjct: 389 NEV 391 >gi|322513950|ref|ZP_08067025.1| ABC superfamily ATP binding cassette transporter, ABC protein [Actinobacillus ureae ATCC 25976] gi|322120176|gb|EFX92134.1| ABC superfamily ATP binding cassette transporter, ABC protein [Actinobacillus ureae ATCC 25976] Length = 302 Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 7/72 (9%) Query: 188 QNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDLPEMSQDEAIKYINHVYLLGKWIS 247 +N+ RH+ ++N L+ E+ ++ +L++ E+ LDL + S+++ + + H Y KW+ Sbjct: 199 ENLCRHIGIIQNGLLVENTSMKALLAKLETETFVLDLQKKSENQPL--VIHSYPF-KWLD 255 Query: 248 RG----EIQRSQ 255 E+QR Q Sbjct: 256 ENTLEVEVQREQ 267 >gi|27365752|ref|NP_761280.1| hypothetical protein VV1_2438 [Vibrio vulnificus CMCP6] gi|27361901|gb|AAO10807.1| hypothetical protein VV1_2438 [Vibrio vulnificus CMCP6] Length = 322 Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 24/134 (17%) Query: 118 RKLRMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIV----FSSDRE 173 +K +++ + D+I I+ S+ ++ + E+ +SDI+ + +A KK F Sbjct: 149 KKTQIVPNNDKIRNILDSV----SEFSQSEQVTVSDIKSHI--EAFKKHCEDPEFDYSNN 202 Query: 174 EYIGLHQKQIDLI-------HQNIDRHLARMKNQLVAESDELEDIL----SRYSIESIPL 222 ++ Q DLI H N+D++ ++N+ +AE +E+IL + Y E I + Sbjct: 203 QF---PQSFADLIFSYCAKKHNNVDKYSYWLRNETLAEKARIENILIFGSALYGEEKIDV 259 Query: 223 DLPEMSQDEAIKYI 236 D+ + D +I+ + Sbjct: 260 DIVIKTNDSSIEQV 273 >gi|260891255|ref|ZP_05902518.1| O-antigen acetylase [Leptotrichia hofstadii F0254] gi|260859282|gb|EEX73782.1| O-antigen acetylase [Leptotrichia hofstadii F0254] Length = 605 Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 15 KWSFLFAILSPTEVYNVHRRIWHLLRDDFGYFTKRTFFCFAFFITIIYVFFPIFINFLIS 74 K+S LF++L +Y + ++ + D+FG T F+ +YVFFPI I L Sbjct: 95 KYSALFSVLGLNNIYQIFSKMSYF--DNFGIILPLTHIWALSFLIQMYVFFPILIQGLKK 152 Query: 75 YIYKN 79 KN Sbjct: 153 LKLKN 157 >gi|6682319|emb|CAB64662.1| myosin heavy chain [Mytilus galloprovincialis] Length = 1705 Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%) Query: 119 KLRMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLND--ASKKIVFSSDREEYI 176 K +M + D + + I+ + + K E+ K D Q + L D A + + S + Sbjct: 704 KRKMEGENDELKKDIEDLENSLA--KSEQEKTTKDNQIKTLQDEMAQQDDIISKLNRDKK 761 Query: 177 GL---HQKQIDLIHQNIDR--HLARMKNQLVAESDELEDILSR 214 G+ H++ +D + + D+ HL+++K +L + DELED L R Sbjct: 762 GMDEDHKRTLDALQKEEDKVNHLSKLKQKLESTLDELEDGLER 804 >gi|316974869|gb|EFV58339.1| tankyrase-1 [Trichinella spiralis] Length = 1200 Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 8/129 (6%) Query: 108 MSCILVATDDRKLRMIEDGDRIIEIIQSIRRAFDQYKEEERKALSDIQEQLLNDASKKIV 167 + +L+A+ D L ++ I S A D+Y EE D+Q Q K Sbjct: 820 LDTVLIASPDELLPVVSSFTAIPSGENSTN-AVDKYANEE--LFHDVQFQFCRPIDGKSD 876 Query: 168 FSSDREEYIGLHQKQI----DLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLD 223 F + +Y Q+Q D +HQ D+ LA M L +S LE + + E I LD Sbjct: 877 FYTQYLDYPIKQQQQQNRARDFLHQERDKPLAEMSVPLFLKSIGLECLKDLFYKEQITLD 936 Query: 224 -LPEMSQDE 231 L EMS ++ Sbjct: 937 VLVEMSHED 945 >gi|224057327|ref|XP_002188144.1| PREDICTED: leucine rich repeat containing 39 [Taeniopygia guttata] Length = 335 Score = 35.4 bits (80), Expect = 8.7, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 20/114 (17%) Query: 146 EERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQKQIDLIH-----------QNIDRHL 194 EER AL+ ++E+++N+ + I+ + EE+ L + LIH Q I + + Sbjct: 44 EERAALAKLKEKVINEGGRAIL-RIEEEEWKTLPSCLLKLIHLQEWQLHRTSLQKIPQFI 102 Query: 195 ARMKNQLVAESDELEDILSRYSIESIPLDLPEM-SQDEAIKYINHVYLLGKWIS 247 R + +V + LSR SIES+P ++ ++ S E + N + + K IS Sbjct: 103 GRFHSLVVLD-------LSRNSIESVPKEIGQLTSLQELLLSYNRIKSVPKEIS 149 >gi|118094275|ref|XP_422312.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 342 Score = 35.4 bits (80), Expect = 9.3, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 22/115 (19%) Query: 146 EERKALSDIQEQLLNDASKKIVFSSDREEYIGLHQKQIDLIH-----------QNIDRHL 194 EER L+ ++E+++N+ + V + EE+ L + L+H Q I + + Sbjct: 48 EERATLAKLKEKVINEDGRA-VLKIEEEEWKTLPSCLLKLVHLQEWQLHRTSLQKIPQFV 106 Query: 195 ARMKNQLVAESDELEDILSRYSIESIPLDLPEMS--QDEAIKYINHVYLLGKWIS 247 R N +V + LSR SIESIP ++ +++ Q+ + Y N + + K IS Sbjct: 107 GRFHNLVVLD-------LSRNSIESIPKEIGQLTGLQELLLSY-NRIKFVPKEIS 153 >gi|73543083|ref|YP_297603.1| hypothetical protein Reut_A3401 [Ralstonia eutropha JMP134] gi|72120496|gb|AAZ62759.1| hypothetical protein Reut_A3401 [Ralstonia eutropha JMP134] Length = 163 Score = 35.4 bits (80), Expect = 9.3, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 1/40 (2%) Query: 170 SDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELE 209 ++R+ Y LHQ+ +D +HQ +DR A MK +L AE++ L+ Sbjct: 66 AERDVYRELHQRTVDELHQAVDRSPAEMK-RLRAETETLQ 104 >gi|326437413|gb|EGD82983.1| hypothetical protein PTSG_03620 [Salpingoeca sp. ATCC 50818] Length = 970 Score = 35.4 bits (80), Expect = 9.3, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%) Query: 114 ATDDRKLRMIEDGDR----IIEIIQSIRRA-----FDQYKEEERKALSDIQEQLLNDASK 164 A +++ R+ GD ++ ++S RA D ++E +DI ++ L + Sbjct: 337 ALSEQRRRLTAQGDESRANALQRLESAMRAEKLRELDDLRQELDSRYADIVDRKLAEQRH 396 Query: 165 KIVFSSDREEYIGLHQKQIDLIHQNIDRHLARMKNQLVAESDELEDILSRYSIESIPLDL 224 ++ ++ E+ L Q +L HQ D L RM+ L+A+ D L R ++ Sbjct: 397 ALLAQANHEKVSELESLQSELTHQQ-DADLERMRRDLIADKDRAIQTLRRQHAAAVSRLE 455 Query: 225 PEMSQDE 231 E++Q + Sbjct: 456 GELAQQQ 462 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.326 0.141 0.418 Lambda K H 0.267 0.0457 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,527,540,455 Number of Sequences: 14124377 Number of extensions: 252763977 Number of successful extensions: 1107494 Number of sequences better than 10.0: 200 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 337 Number of HSP's that attempted gapping in prelim test: 1107277 Number of HSP's gapped (non-prelim): 518 length of query: 266 length of database: 4,842,793,630 effective HSP length: 136 effective length of query: 130 effective length of database: 2,921,878,358 effective search space: 379844186540 effective search space used: 379844186540 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 80 (35.3 bits)