PSIBLAST alignment of GI: 254781076 and protein with PDB id: 1uax
gi|50513813|pdb|1UAX|A Chain A, Crystal Structure Of The Ribonuclease H2 From Pyrococcus Horikoshii Ot3 Length = 220
>gi|50513814|pdb|1UAX|B Chain B, Crystal Structure Of The Ribonuclease H2 From Pyrococcus Horikoshii Ot3 Length = 220
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 26 VAGIDEVGRGALAGPVVVAAIILDPNNIP----FGINDSKKISHKKREELYEK-ITSSAI 80
VAG+DE GRG + GP+V+ ++D NI G+ DSK+++ +RE+L+ K I
Sbjct: 3 VAGVDEAGRGPVIGPLVIGVAVIDEKNIERLRDIGVKDSKQLTPGQREKLFSKLIDILDD 62
Query: 81 ISISSASHQYIDKHNIHKATLDAIYHAVENLQVIPRSALIDGRSIPED------------ 128
+ + + ID+ + L+A V + + I S D
Sbjct: 63 YYVLLVTPKEIDERHHSMNELEAEKFVVALNSLRIKPQKIYVDSADVDPKRFASLIKAGL 122
Query: 129 -LPCQAFAVIKGDSISLSIAAASIIAKVTRDRLMRIAHKKYPDYGFDSHVGYPT-AKHQQ 186
A K D+ ++AASIIAKVTRDR + +KY ++G GYP+ + ++
Sbjct: 123 KYEATVIAEHKADAKYEIVSAASIIAKVTRDREIEKLKQKYGEFG----SGYPSDPRTKE 178
Query: 187 VI----KEKG-PSCIHRLTFRPLRNL 207
+ K+ G I R T+ R +
Sbjct: 179 WLEEYYKQYGDFPPIVRRTWETARKI 204