PSIBLAST alignment of GI: 254781076 and protein with PDB id: 3p5j
gi|312208159|pdb|3P5J|A Chain A, The Structure Of The Human Rnase H2 Complex Defines Key Interaction Interfaces Relevant To Enzyme Function And Human Disease Length = 301
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 73/221 (33%), Gaps = 42/221 (19%)
Query: 26 VAGIDEVGRGALAGPVVVAAIILD----PNNIPFGINDSKKISHKKREELYEKIT---SS 78
V G+DE GRG + GP+V A + + DSK ++ +RE L+ K+
Sbjct: 30 VLGVDEAGRGPVLGPMVYAICYCPLSRLADLEALKVADSKTLTENERERLFAKMEEDGDF 89
Query: 79 AIISISSASHQYIDKHN-------------------IHKATLDAIYHAVENLQVIPRSAL 119
++ S I I A + + +
Sbjct: 90 VGWALDVLSPNLISTSMLGRVKYNLNSLSHDTAAGLIQYALDQNVNVTQVFVDTVGMPET 149
Query: 120 IDGRSIPEDLPCQAFAVIKGDSISLSIAAASIIAKVTRDR------LMRIAHKKYPDYGF 173
R + K DS+ ++AASI AKV RD+ + DYG
Sbjct: 150 YQARLQQHFPGIEVTVKAKADSLFPVVSAASIFAKVARDKAVKNWQFVENLQDLDSDYG- 208
Query: 174 DSHVGYPT-AKHQQVIKEK-----GPSCIHRLTFRPLRNLS 208
GYP K + +++ G R ++ + +
Sbjct: 209 ---SGYPNDPKTKAWLRKHVDPVFGFPQFVRFSWSTAQAIL 246