RPSBLAST alignment for GI: 254781076 and conserved domain: KOG2299
>gnl|CDD|37510 KOG2299, KOG2299, KOG2299, Ribonuclease HI [Replication, recombination and repair]. Length = 301
Score = 65.8 bits (160), Expect = 8e-12
Identities = 63/190 (33%), Positives = 83/190 (43%), Gaps = 39/190 (20%)
Query: 26 VAGIDEVGRGALAGPVVVAAII------LDPNNIPFGINDSKKISHKKREELYEKITSS- 78
V GIDE GRG + GP+V AA D N G DSK ++ KREEL+ KI
Sbjct: 30 VLGIDEAGRGPVLGPMVYAAAYCPLDYLEDLEN--LGFADSKTLTEAKREELFNKIKEDE 87
Query: 79 --------AIISIS----SASHQYIDKHNI----HKATLDAIYHAVE---NLQVIPRSAL 119
A IS SAS +K+N+ H + + I ++ N+ I +
Sbjct: 88 ELTSNVGWATDCISPREISASMLRRNKYNLNEVSHDSAMGLIDEVLDQGVNVTEIYVDTV 147
Query: 120 IDGRSIPEDL----PCQAFAVI-KGDSISLSIAAASIIAKVTRDRLMRI----AHKKYPD 170
E L P F V K DS+ ++AASI+AKVTRDR ++ PD
Sbjct: 148 GPPAKYQEKLEKRFPGIKFTVTKKADSLFPIVSAASIVAKVTRDRALKEWQFEEKLSDPD 207
Query: 171 YGFDSHVGYP 180
S GYP
Sbjct: 208 EDLGS--GYP 215