RPSBLAST alignment of GI: 254781076 and MMDB domain: 2d0b_A_83-265

>2d0b_A (A:83-265) RNAse HIII, ribonuclease HIII; RNA/DNA hybrid, hydrolase; 2.10A {Geobacillus stearothermophilus} PDB: 2d0a_A 2d0c_ALength = 183

 Score =  151 bits (383), Expect = 5e-38
 Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 26/180 (14%)

Query: 19  REKNMWPVAGIDEVGRGALAGPVVVAAIILDPNNIPF----GINDSKKISHKKREELYEK 74
            +       G DEVG G   GP+VVAA  +D  +I      G+ DSK+++ +  + +   
Sbjct: 4   HQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPA 63

Query: 75  ITSSAIISISSASHQYID-----KHNIHKATLDAIYHAVENLQ-----VIPRSALIDGRS 124
           I  +   +++   +   +          K         +  L        P + +ID   
Sbjct: 64  IMETVPHAVTVLDNPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAPAEPEAIIIDEFL 123

Query: 125 IPE-----------DLPCQAFAVIKGDSISLSIAAASIIAKVTRDRLMRIAHKKYPDYGF 173
             +            +  +   + K +S+ +S+AAASIIA+      M    +       
Sbjct: 124 KRDSYFRYLSDEDRIIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAVG-LLL 182