RPSBLAST alignment of GI: 254781076 and protein with PDBid: 1io2

>1io2_A Ribonuclease HII; endonuclease, hydrolase; 2.00A {Thermococcus kodakarensis KOD1} SCOP: c.55.3.1 PDB: 2dfh_A 2dff_A 2dfe_A 1x1p_A Length = 213

 Score =  159 bits (404), Expect = 3e-40
 Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 28/206 (13%)

Query: 26  VAGIDEVGRGALAGPVVVAAIILDPNNIP----FGINDSKKISHKKREELYEKITSSAII 81
           +AGIDE GRG + GP+V+AA+++D N++P      + DSKK++ K+RE+L+ +I      
Sbjct: 3   IAGIDEAGRGPVIGPMVIAAVVVDENSLPKLEELKVRDSKKLTPKRREKLFNEILGVLDD 62

Query: 82  S---ISSASHQYIDKHNIHKATLDAIYHAVENLQVIPRSALIDGRSIPE----------- 127
                         +  +++  ++    A+ +L+V P     D   + E           
Sbjct: 63  YVILELPPDVIGSREGTLNEFEVENFAKALNSLKVKPDVIYADAADVDEERFARELGERL 122

Query: 128 DLPCQAFAVIKGDSISLSIAAASIIAKVTRDRLMRIAHKKYPDYGFDSHVGYPTAKHQQV 187
           +   +  A  K D I   ++AASI+AKVTRDR +    ++Y + G     GYP+    + 
Sbjct: 123 NFEAEVVAKHKADDIFPVVSAASILAKVTRDRAVEKLKEEYGEIGS----GYPSDPRTRA 178

Query: 188 IKEK------GPSCIHRLTFRPLRNL 207
             E           I R  ++ L+ +
Sbjct: 179 FLENYYREHGEFPPIVRKGWKTLKKI 204