RPSBLAST alignment of GI: 254781076 and protein with PDBid: 2etj
>2etj_A Ribonuclease HII, RNAse HII; TM0915, ribonuclease HII (EC 3.1.26.4) (RNAse HII), structural genomics, joint center for structural genomics; 1.74A {Thermotoga maritima} SCOP: c.55.3.1 Length = 250
Score = 191 bits (487), Expect = 9e-50
Identities = 87/188 (46%), Positives = 114/188 (60%), Gaps = 4/188 (2%)
Query: 20 EKNMWPVAGIDEVGRGALAGPVVVAAIILDPNNIPFGINDSKKISHKKREELYEKITSSA 79
+K VAG+DE GRG LAGPVV AA++L+ GINDSK++S KRE L ++I A
Sbjct: 20 KKEFGIVAGVDEAGRGCLAGPVVAAAVVLEKEIE--GINDSKQLSPAKRERLLDEIMEKA 77
Query: 80 IISISSASHQYIDKHNIHKATLDAIYHAVENLQVIPRSALIDGRSIPEDLPCQAFAVIKG 139
+ I AS + ID +NI AT A+ A+ENL V P L+DG+ I +P ++KG
Sbjct: 78 AVGIGIASPEEIDLYNIFNATKLAMNRALENLSVKPSFVLVDGKGIELSVPGTC--LVKG 135
Query: 140 DSISLSIAAASIIAKVTRDRLMRIAHKKYPDYGFDSHVGYPTAKHQQVIKEKGPSCIHRL 199
D S I AASI+AKV RDRLM H+ YP + F H GY T +H I++ G IHRL
Sbjct: 136 DQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRL 195
Query: 200 TFRPLRNL 207
+F P+ L
Sbjct: 196 SFEPVLEL 203