HHsearch alignment for GI: 254781078 and conserved domain: COG2067
>COG2067 FadL Long-chain fatty acid transport protein [Lipid metabolism].
Probab=98.52 E-value=6.8e-06 Score=50.84 Aligned_cols=147 Identities=18% Similarity=0.143 Sum_probs=74.9
Q ss_pred CCCEEEEEEEEEEEEC-CEEEEE----EEEEEEECCCC------------------CCCC--CCCCCEEEEEEEEEEEEE
Q ss_conf 7550479988655445-779999----98867404777------------------6432--310100367989998633
Q gi|254781078|r 85 LPNGLGIELGHNIQLE-DFVFGI----NCHTTAAKDDS------------------TFYR--LKEKYFIYGDVVLKAGYS 139 (242)
Q Consensus 85 ~~~g~G~~~GYN~Q~~-~~V~Gv----E~d~~~~~~~~------------------~~~~--~~~k~~~~Gsvr~r~Gya 139 (242)
T Consensus 216 ~~~g~G~~lG~~ye~~d~~r~g~~YrS~V~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~lP~~~el~~~~~ 295 (440)
T COG2067 216 EDWGFGWNLGVAYEINDNNRIGLSYRSKVKMDFKGGYESSLNLGMAGLPIGPLALGGVTPGSGKLTLSLPASAELSGQHK 295 (440)
T ss_pred CCCCCEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCEEEEEEEEC
T ss_conf 56422067888981686405778973055674257732102554444444322447430234347770585799722640
Q ss_pred E-CCEEEEEEEEEEEEEEECCCCCCCCCCC--CCCCCCCCCC-CCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCEEEC
Q ss_conf 1-4403444401145753011000236666--5555434556-5303798731667327876888898887448730003
Q gi|254781078|r 140 V-DSLLIYGMGGFGGAYVIDSSLEKVESDN--SKNAKGRFDG-HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215 (242)
Q Consensus 140 ~-~~~l~Y~~gG~A~~~~~~~~~~~~~~~~--~~~~~~~~d~-t~~G~tvGaGVEYait~nwslraEY~Y~d~g~~~~~~ 215 (242)
T Consensus 296 ~~d~w~~~~s~--~--wT~WS~f~~l~~~~~~~~~~~~~~~~~yrD~wt~a~G~~Y~~nd~~tlragiayD~s~s~~~~~ 371 (440)
T COG2067 296 VADQWAIHGSV--K--WTDWSSFDKLDFVFTFGKTLFAKTEDGYRDTWTVALGTTYKFNDQWTLRAGIAYDQSPSPAQNR 371 (440)
T ss_pred CCCCEEEEEEE--E--EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECEEECCCCCEEEEEEEECCCCCCCCCC
T ss_conf 38870799889--9--8651677448889768875224653341043179400106738663375003345788854455
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 666666442201234138999886209
Q gi|254781078|r 216 SNAKSDVERVDRKGNAHIASLGINMHF 242 (242)
Q Consensus 216 ~~~~~~~~~~~~~~~~h~v~~GinY~F 242 (242)
T Consensus 372 ~~-------~iPd~Dr~~~s~G~~Y~~ 391 (440)
T COG2067 372 SI-------SIPDTDRWWLSLGTTYKF 391 (440)
T ss_pred CC-------CCCCCCCEEEECCCEEEC
T ss_conf 43-------247877579966647725