HHsearch alignment of GI: 254781078 and MMDB domain: 2f1v_A_
>2f1v_A (A:) Outer membrane protein W; outer membrane protein beta barrel; 2.70A {Escherichia coli K12} PDB: 2f1t_A
Probab=99.91 E-value=7e-23 Score=143.47 Aligned_cols=185 Identities=9% Similarity=0.007 Sum_probs=121.8
Q ss_pred EEEEEEEEEEEEEEEEEEECCCCCCCCCC-CCCCCCEEEEEEEEEEEECCEEEEEEEEEEEECCC-CC---CCCCCCCCE
Q ss_conf 00005744464410332221455566666-76675504799886554457799999886740477-76---432310100
Q gi|254781078|r 53 IWSGNYVGLHISRLYETHPLADTINRKTY-NSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD-ST---FYRLKEKYF 127 (242)
Q Consensus 53 ~WtG~YiG~~~G~~~~~~~~~d~~~~~~~-n~~~~~g~G~~~GYN~Q~~~~V~GvE~d~~~~~~~-~~---~~~~~~k~~ 127 (242)
.|+|+|||+++|+.+...+.......... ....+..+++++||+++ .+|-+.+|..+...... .. ...-.....
T Consensus 2 ~~~g~Yig~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gy~~~-~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
T 2f1v_A 2 EAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMAT-DNIGVELLAATPFRHKIGTRATGDIATVHHLP 80 (197)
T ss_dssp CTTCEEEEEEEEEEECCCC---------CCEECCEEEEEEEEEEESS-SSEEEEEEEESCEEEEEEETTTEEEEEEEEEC
T ss_pred CCCCEEEEECEEEECCCCCCCCCCCCCCCEEECCCEEEEEEEEEEEE-CCCEEEEEEEEEEEEEECCCCCCCCCCEEEEC
T ss_conf 77788999466998864678864367663486787488689999950-67215667656100010124777522045504
Q ss_pred EEEEEEEEEEEEECCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE
Q ss_conf 36798999863314403444401145753011000236666555543455653037987316673278768888988874
Q gi|254781078|r 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207 (242)
Q Consensus 128 ~~Gsvr~r~Gya~~~~l~Y~~gG~A~~~~~~~~~~~~~~~~~~~~~~~~d~t~~G~tvGaGVEYait~nwslraEY~Y~d 207 (242)
....++-+.....+++.||+.+|+++++++......... ........++++++|.+|+|++|.|+++|++++||||++
T Consensus 81 ~~~~~~y~~~~~~~~~~py~~~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~G~~y~l~~~~~l~~eyry~~ 158 (197)
T 2f1v_A 81 PTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGK--EAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMD 158 (197)
T ss_dssp CEEEEEEECSCTTCSEEEEEEEEEEEEEEEEEEECHHHH--HTTEEEEEECCEEEEEEEEEEEEECSSSEEEEEEEEEEC
T ss_pred CEEEEEEEECCCCCCEEEEEEECCEEEEEEECCCCCCCC--CCCCCCCCCCCCEEEEEECCEEEECCCCEEEEEEEEEEE
T ss_conf 248899986177775889997321778996000156776--542212445663838997348999079839999999997
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 48730003666666442201234138999886209
Q gi|254781078|r 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242 (242)
Q Consensus 208 ~g~~~~~~~~~~~~~~~~~~~~~~h~v~~GinY~F 242 (242)
+.++....... .....+.+.+.|.+++||+|||
T Consensus 159 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~G~~Y~F 191 (197)
T 2f1v_A 159 IDTTANYKLGG--AQQHDSVRLDPWVFMFSAGYRF 191 (197)
T ss_dssp CEEEEEEEESS--CCCCEEEECCCEEEEEEEEEEE
T ss_pred CCCCEEEECCC--CCCCEEEEECCEEEEEEEEEEE
T ss_conf 45515784288--6311048727138999999996