HHsearch alignment of GI: 254781078 and MMDB domain: 2f1v_A_

>2f1v_A (A:) Outer membrane protein W; outer membrane protein beta barrel; 2.70A {Escherichia coli K12} PDB: 2f1t_A
Probab=99.91  E-value=7e-23  Score=143.47  Aligned_cols=185  Identities=9%  Similarity=0.007  Sum_probs=121.8

Q ss_pred             EEEEEEEEEEEEEEEEEEECCCCCCCCCC-CCCCCCEEEEEEEEEEEECCEEEEEEEEEEEECCC-CC---CCCCCCCCE
Q ss_conf             00005744464410332221455566666-76675504799886554457799999886740477-76---432310100
Q gi|254781078|r   53 IWSGNYVGLHISRLYETHPLADTINRKTY-NSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD-ST---FYRLKEKYF  127 (242)
Q Consensus        53 ~WtG~YiG~~~G~~~~~~~~~d~~~~~~~-n~~~~~g~G~~~GYN~Q~~~~V~GvE~d~~~~~~~-~~---~~~~~~k~~  127 (242)
                      .|+|+|||+++|+.+...+.......... ....+..+++++||+++ .+|-+.+|..+...... ..   ...-.....
T Consensus         2 ~~~g~Yig~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gy~~~-~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (197)
T 2f1v_A            2 EAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMAT-DNIGVELLAATPFRHKIGTRATGDIATVHHLP   80 (197)
T ss_dssp             CTTCEEEEEEEEEEECCCC---------CCEECCEEEEEEEEEEESS-SSEEEEEEEESCEEEEEEETTTEEEEEEEEEC
T ss_pred             CCCCEEEEECEEEECCCCCCCCCCCCCCCEEECCCEEEEEEEEEEEE-CCCEEEEEEEEEEEEEECCCCCCCCCCEEEEC
T ss_conf             77788999466998864678864367663486787488689999950-67215667656100010124777522045504


Q ss_pred             EEEEEEEEEEEEECCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE
Q ss_conf             36798999863314403444401145753011000236666555543455653037987316673278768888988874
Q gi|254781078|r  128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP  207 (242)
Q Consensus       128 ~~Gsvr~r~Gya~~~~l~Y~~gG~A~~~~~~~~~~~~~~~~~~~~~~~~d~t~~G~tvGaGVEYait~nwslraEY~Y~d  207 (242)
                      ....++-+.....+++.||+.+|+++++++.........  ........++++++|.+|+|++|.|+++|++++||||++
T Consensus        81 ~~~~~~y~~~~~~~~~~py~~~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~G~~y~l~~~~~l~~eyry~~  158 (197)
T 2f1v_A           81 PTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGK--EAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMD  158 (197)
T ss_dssp             CEEEEEEECSCTTCSEEEEEEEEEEEEEEEEEEECHHHH--HTTEEEEEECCEEEEEEEEEEEEECSSSEEEEEEEEEEC
T ss_pred             CEEEEEEEECCCCCCEEEEEEECCEEEEEEECCCCCCCC--CCCCCCCCCCCCEEEEEECCEEEECCCCEEEEEEEEEEE
T ss_conf             248899986177775889997321778996000156776--542212445663838997348999079839999999997


Q ss_pred             CCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf             48730003666666442201234138999886209
Q gi|254781078|r  208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF  242 (242)
Q Consensus       208 ~g~~~~~~~~~~~~~~~~~~~~~~h~v~~GinY~F  242 (242)
                      +.++.......  .....+.+.+.|.+++||+|||
T Consensus       159 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~G~~Y~F  191 (197)
T 2f1v_A          159 IDTTANYKLGG--AQQHDSVRLDPWVFMFSAGYRF  191 (197)
T ss_dssp             CEEEEEEEESS--CCCCEEEECCCEEEEEEEEEEE
T ss_pred             CCCCEEEECCC--CCCCEEEEECCEEEEEEEEEEE
T ss_conf             45515784288--6311048727138999999996