HHsearch alignment of GI: 254781078 and MMDB domain: 2j1n_A_
>2j1n_A (A:) Outer membrane protein C; beta-barrel, ION transport, non-specific porin, general porin, osmoporin, transmembrane transport; HET: D12; 2.0A {Escherichia coli} PDB: 2j4u_P 2zle_D 2ixx_A* 2ixw_A* 1osm_A*
Probab=97.52 E-value=0.0044 Score=35.12 Aligned_cols=52 Identities=17% Similarity=0.263 Sum_probs=38.9
Q ss_pred EEEEEEEEEEECCCCEEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 3798731667327876888898887448730003666666442201234138999886209
Q gi|254781078|r 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242 (242)
Q Consensus 182 G~tvGaGVEYait~nwslraEY~Y~d~g~~~~~~~~~~~~~~~~~~~~~~h~v~~GinY~F 242 (242)
--.+..|++|.++++..+.+||.|++....+... .....+...+.+||.|+|
T Consensus 295 ~~~~~~g~~Y~~sk~~~~y~~~~~~~~~~~~~~~---------~~~~~~~~~~~vGlr~~F 346 (346)
T 2j1n_A 295 LKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTR---------DAGINTDNIVALGLVYQF 346 (346)
T ss_dssp EEEEEEEEEEESSSSEEEEEEEEEECCCCCHHHH---------HHTCCCSCEEEEEEEEEC
T ss_pred EEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCC---------CCCCCCCCEEEEEEEEEC
T ss_conf 6999999999816998999999985356642233---------467766778999999989