HHsearch results for GI: 254781078 and protein with PDBid: 2jmm_A
>2jmm_A Outer membrane protein A; NMR {Escherichia coli}
Probab=99.68 E-value=3.5e-15 Score=100.50 Aligned_cols=145 Identities=18% Similarity=0.093 Sum_probs=91.5
Q ss_pred EEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEE
Q ss_conf 00574446441033222145556666676675504799886554457799999886740477764323101003679899
Q gi|254781078|r 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134 (242)
Q Consensus 55 tG~YiG~~~G~~~~~~~~~d~~~~~~~n~~~~~g~G~~~GYN~Q~~~~V~GvE~d~~~~~~~~~~~~~~~k~~~~Gsvr~ 134 (242)
.++|||+++|...... -...+.|+++|| ||.++ +++|+.+........ +.+. ..-++.+
T Consensus 5 ~~~YvG~~~G~~~~~~-------------d~~~~~g~~~GY--~fn~~-~~~E~~Y~~~g~~~~----~~~~-~~~~~~~ 63 (156)
T 2jmm_A 5 NTWYTGAKLGWSQYSR-------------ENQLGAGAFGGY--QVNPY-VGFEMGYDWLGRMPR----KAQG-VQLTAKL 63 (156)
T ss_dssp SEEEEEEEEEEETTCC-------------SSCCEEEEEEEE--ECSSS-EEEEEEEEEECSSSS----CEEE-EEEEEEE
T ss_pred CCEEEEEECCCCCCCC-------------CCCCEEEEEEEE--EECCC-EEEEEEEEECCCCCC----CCCC-CEEEEEE
T ss_conf 9798958636412147-------------887433699988--86624-006873660046651----0024-1588999
Q ss_pred EEEEEE-CCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCEE
Q ss_conf 986331-4403444401145753011000236666555543455653037987316673278768888988874487300
Q gi|254781078|r 135 KAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213 (242)
Q Consensus 135 r~Gya~-~~~l~Y~~gG~A~~~~~~~~~~~~~~~~~~~~~~~~d~t~~G~tvGaGVEYait~nwslraEY~Y~d~g~~~~ 213 (242)
+.-+.. +++.||+++|+++.+.+.... ......+.+.+..++.+|+|+||.++++|++++|+|+.-
T Consensus 64 ~~~~~~~~~~~~y~~~G~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~G~G~~y~~~~~~~~~~~~~~~y------ 130 (156)
T 2jmm_A 64 GYPKLGTDDLDIYTRLGGMVWRADTSDK-------DGNGYISAAEASVSPVFAGGVEYVIRRRITPEIATRLEY------ 130 (156)
T ss_dssp EECTTCTTTCEEEEEEEEEEESSBCCCC-------CSSSCCCCCBCCCCEEEEEEEEEECSSSCSSSEEEEEEE------
T ss_pred EEEECCCCCEEEEEEEEEEEEEEEECCC-------CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEE------
T ss_conf 9876236753398897578998450102-------577620125676384188789997432546355899999------
Q ss_pred ECCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 03666666442201234138999886209
Q gi|254781078|r 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242 (242)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~h~v~~GinY~F 242 (242)
...+.+.+.|.+++||+|||
T Consensus 131 ---------~~~~~~~d~~~~~~Gl~Y~F 150 (156)
T 2jmm_A 131 ---------QWTNNASDNGMLSLGVSYRF 150 (156)
T ss_dssp ---------EEESSSSCEEEEEEEEEEES
T ss_pred ---------EEECCCCCCCEEEEEEEEEC
T ss_conf ---------98178888767999999999