HHSEARCH alignment of GI: 254781078 and SCOP domain: d1phoa_

Alignment

Probab=96.99  E-value=0.007  Score=31.86  Aligned_cols=47  Identities=19%  Similarity=0.365  Sum_probs=33.4

Q ss_pred             EEEEEEEEECCCCEEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf             98731667327876888898887448730003666666442201234138999886209
Q gi|254781078|r  184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF  242 (242)
Q Consensus       184 tvGaGVEYait~nwslraEY~Y~d~g~~~~~~~~~~~~~~~~~~~~~~h~v~~GinY~F  242 (242)
                      .+-.|++|.|+++..+-+||+|.+......     .       ...+...+.+||.|+|
T Consensus       284 ~~~vG~~Y~lsk~~~~yaey~~~~~d~~~~-----~-------~~~~~~~~~vGlr~~F  330 (330)
T d1phoa_         284 YIDVGATYYFNKNMSAFVDYKINQLDSDNK-----L-------NINNDDIVAVGMTYQF  330 (330)
T ss_dssp             EEEEEEEEESSSSEEEEEEEEEECCCSSCT-----T-------CCCCCCEEEEEEEEEC
T ss_pred             EEEEEEEEEECCCEEEEEEEEEECCCCCCC-----C-------CCCCCCEEEEEEEEEC
T ss_conf             999999999079989999999971457665-----7-------7666889999999989

SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Transmembrane beta-barrels
superfamily: Porins
family: Porin
domain: Porin
species: Escherichia coli, different sequences [TaxId: 562]