PSIBLAST alignment of GI: 254781078 and protein with PDB id: 1qjp
>gi|9256903|pdb|1QJP|A Chain A, High Resolution Structure Of The Outer Membrane Protein A (Ompa) Transmembrane Domain Length = 171
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 61/189 (32%), Gaps = 28/189 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + + + IN G G G+ Q+ +V G
Sbjct: 7 WYTGAKLG--WSQYHDTGLINNNGPTHENKLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 61
Query: 117 STFYRLKEKYFIYGDV--VLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
++ + V K GY + D L IY G +D N
Sbjct: 62 PYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLG----------GMVWRADTYSNVY 111
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ +N D + + + +
Sbjct: 112 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNGM 161
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 162 LSLGVSYRF 170