BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781078|ref|YP_003065491.1| hypothetical protein
CLIBASIA_04900 [Candidatus Liberibacter asiaticus str. psy62]
(242 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254781078|ref|YP_003065491.1| hypothetical protein CLIBASIA_04900 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040755|gb|ACT57551.1| hypothetical protein CLIBASIA_04900 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 242
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG
Sbjct: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY
Sbjct: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG
Sbjct: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM
Sbjct: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
Query: 241 HF 242
HF
Sbjct: 241 HF 242
>gi|294852064|ref|ZP_06792737.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|294820653|gb|EFG37652.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
Length = 305
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 97 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 149
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 150 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQ 205
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 206 GFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAG 254
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +GI F
Sbjct: 255 AGLEAKLTDNILGRVEYRYTQYGNKNYDLAG-----TTVRNKLDTQDIRVGIGYKF 305
>gi|297248070|ref|ZP_06931788.1| 25 kDa outer-membrane immunogenic protein [Brucella abortus bv. 5
str. B3196]
gi|297175239|gb|EFH34586.1| 25 kDa outer-membrane immunogenic protein [Brucella abortus bv. 5
str. B3196]
Length = 305
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 97 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 149
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 150 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQ 205
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 206 GFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAG 254
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +GI F
Sbjct: 255 AGLEAKLTDNILGRVEYRYTQYGNKNYDLAG-----TTVRNKLDTQDIRVGIGYKF 305
>gi|189023912|ref|YP_001934680.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
gi|225627199|ref|ZP_03785237.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237815152|ref|ZP_04594150.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|260566721|ref|ZP_05837191.1| outer membrane protein [Brucella suis bv. 4 str. 40]
gi|189019484|gb|ACD72206.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
gi|225618034|gb|EEH15078.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237789989|gb|EEP64199.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|260156239|gb|EEW91319.1| outer membrane protein [Brucella suis bv. 4 str. 40]
Length = 305
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 97 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 149
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 150 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQ 205
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 206 GFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAG 254
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +GI F
Sbjct: 255 AGLEAKLTDNILGRVEYRYTQYGNKNYDLAG-----TTVRNKLDTQDIRVGIGYKF 305
>gi|239831535|ref|ZP_04679864.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
gi|239823802|gb|EEQ95370.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
Length = 266
Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 70/236 (29%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L + + A D + + W+G Y GL++
Sbjct: 58 KSLVIASAALLPFSATAFAADAIQEQP-------PVPAPVEMAPQYSWAGGYTGLYLGYG 110
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + K + G G N Q + FV+G+ + + L+ K
Sbjct: 111 WNKVKTNTDGSIKPDDMK----AGAYAGWNFQQDQFVYGVEGDAGYSWAKKSKNGLEVKE 166
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G V N G
Sbjct: 167 GFEGSLRGRLGYDLNPVMPYITAGVAGKQVKLD-----------NGFDDESKFRVGWTAG 215
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + E V K + H +G+ F
Sbjct: 216 AGLEAKLTDNILGRVEYRYTQFGNKTYDLGT-----ESVRNKLDTHDIRVGVGYKF 266
>gi|153011627|ref|YP_001372841.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151563515|gb|ABS17012.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 228
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 77/247 (31%), Gaps = 29/247 (11%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
+L ++++ + A D + + W+G Y+G I
Sbjct: 2 KIKSLLLASTVALIATTGAKAADAIVEEPAP---------VIVAEPIFSWTGAYIGGQIG 52
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTF---- 119
+ D K G+ G+N + + F+ G++ T +
Sbjct: 53 YGWGKSEFEDAFRVKPD----GFLGGLYAGYNFDVGNNFILGVDGDITYNNLKDNYSATD 108
Query: 120 ----YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
L+ K G V +AG + D + Y GG V ++ D +
Sbjct: 109 GDIAGDLESKLRWSGAVRARAGVAFDRFMPYIAGGVAFGSVKNTLSATDGVDEISVS--- 165
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ G G+DY ++ L YRY + + S V+ K H
Sbjct: 166 QSKTYTGWTAGAGVDYAATDNLILRLEYRYTDYGKKDFDFGTDVS----VEDKFKTHDVR 221
Query: 236 LGINMHF 242
LG+ F
Sbjct: 222 LGVAYKF 228
>gi|316934003|ref|YP_004108985.1| porin [Rhodopseudomonas palustris DX-1]
gi|315601717|gb|ADU44252.1| porin [Rhodopseudomonas palustris DX-1]
Length = 578
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 81/271 (29%), Gaps = 45/271 (16%)
Query: 4 NGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHI 63
N V + + A DL P + W+G Y+G H+
Sbjct: 11 NSISNSIICVSAVLAASCGAHAADLPRPPAA------------KAVAVWNWTGFYLGAHL 58
Query: 64 SRLYETHPLADTINRKTYNSL---LPNGLGIELGHNIQL--EDFVFGINCHTTAAKDDST 118
+ T + + Y G++ G+ Q +V G+ +A D T
Sbjct: 59 GAGFGTAKVDNPFGASIYGDTVRAPKALAGLQAGYTWQAPGSAWVLGVEVDASAIDADGT 118
Query: 119 -----------FYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKV 164
+ + + G + + G++ L+Y GG + + ++
Sbjct: 119 DTCLAYSGQFVSANCRIREHVLGTLTGRLGHAFGAQGRSLLYVKGGGAFL-IGNLTMTTN 177
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA------ 218
SD + +G G+++ + S+ A Y Y ++
Sbjct: 178 ASDYLAQPGAELNATRWGWTVGAGIEHALTPRWSVRAEYDYANFGRRGMDTPGGGFLQTP 237
Query: 219 -------KSDVERVDRKGNAHIASLGINMHF 242
+ + + H+ LG+N F
Sbjct: 238 FNPNTLIDTPGAPTQVRQDMHLIKLGLNYQF 268
>gi|91977250|ref|YP_569909.1| hypothetical protein RPD_2780 [Rhodopseudomonas palustris BisB5]
gi|91683706|gb|ABE40008.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 570
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 86/268 (32%), Gaps = 45/268 (16%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
++ + + + A D+ P D W+G Y+G H+
Sbjct: 3 NSMTCLSAVLFASCGTAHAADIARPPAAD------------PIAALNWTGFYLGAHLGAG 50
Query: 67 YETHPLADTINRKTYNS---LLPNGLGIELGHNIQLED--FVFGINCHTTAAKDDST--- 118
+ T + + Y + G++ G+N Q +V G+ +A D T
Sbjct: 51 FGTTKVDNPYGPSIYGDTVRVPKALAGLQAGYNWQAPGTAWVLGVEADASALDADGTDTC 110
Query: 119 --------FYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + + G + + G++ L+Y GG D ++ D
Sbjct: 111 LAYSGQFVSANCRVREHVLGTLTGRIGHAFGSQGRSLMYVKGGAAFL-TSDLTMTTNAVD 169
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA--------- 218
+G G+++ ++ ++ A Y Y +++ N
Sbjct: 170 YLNRPAAELKETRWGWTVGAGIEHALSSGWAVRAEYDYADFGTRGIDSPNGGFLQIPSNP 229
Query: 219 ----KSDVERVDRKGNAHIASLGINMHF 242
+ + +AH+ LG+N +F
Sbjct: 230 NSLIDTLGAPTRARQDAHLIKLGLNYYF 257
>gi|192291549|ref|YP_001992154.1| hypothetical protein Rpal_3175 [Rhodopseudomonas palustris TIE-1]
gi|192285298|gb|ACF01679.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 566
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 81/259 (31%), Gaps = 37/259 (14%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
SI+ + LAV DL W+G Y+G H+ + T + +
Sbjct: 4 SIICVSAVLAVSCGAAEAADLSRAPATKAI----TAWNWTGFYLGGHLGAGFGTAKVDNP 59
Query: 76 INRKTYNSL---LPNGLGIELGHNIQL--EDFVFGINCHTTAAKDDSTF----------- 119
Y G++ G+N Q +V G+ +A D T
Sbjct: 60 FGPSIYGDTVRAPKALAGLQAGYNWQAHGSPWVLGVEVDASAIDADGTNTCLAYSGQFVS 119
Query: 120 YRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + + G + + G++ L+Y GG + + D
Sbjct: 120 ANCRVREHVVGTLTGRLGHAFGPDGRSLMYVKGGGAFL-FGNFRMTTNAPDYLNQPSAEL 178
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA-------------KSDVE 223
D +G G+++ ++ ++ A Y Y ++ +
Sbjct: 179 DTTRWGWTVGAGIEHALSSRWAVRAEYDYANFGHRGIDGPGGGFLQTPFNPRTLVDTAGA 238
Query: 224 RVDRKGNAHIASLGINMHF 242
+ + H+ LG+N +F
Sbjct: 239 PTQVRQDMHLIKLGLNYYF 257
>gi|39935901|ref|NP_948177.1| hypothetical protein RPA2834 [Rhodopseudomonas palustris CGA009]
gi|39649755|emb|CAE28276.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 566
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 81/259 (31%), Gaps = 37/259 (14%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
SI+ + LAV DL W+G Y+G H+ + T + +
Sbjct: 4 SIICVSAVLAVSCGAAEAADLSRAPATKAI----TAWNWTGFYLGGHLGAGFGTAKVDNP 59
Query: 76 INRKTYNSL---LPNGLGIELGHNIQL--EDFVFGINCHTTAAKDDSTF----------- 119
Y G++ G+N Q +V G+ +A D T
Sbjct: 60 FGPSIYGDTVRAPKALAGLQAGYNWQAHGSPWVLGVEVDASAIDADGTNTCLAYSGQFVS 119
Query: 120 YRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + + G + + G++ L+Y GG + + D
Sbjct: 120 ANCRVREHVVGTLTGRLGHAFGPDGRSLMYVKGGGAFL-FGNFRMTTNAPDYLNQPSAEL 178
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK-------- 228
D +G G+++ ++ ++ A Y Y ++ + +
Sbjct: 179 DTTRWGWTVGAGIEHALSSRWAVRAEYDYANFGHRGIDGPGGGFLQTPFNPRTLVDTAGA 238
Query: 229 -----GNAHIASLGINMHF 242
+ H+ LG+N +F
Sbjct: 239 PTQVHQDMHLIKLGLNYYF 257
>gi|153009914|ref|YP_001371129.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151561802|gb|ABS15300.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 213
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 71/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L + + A D + + W+G Y GL++
Sbjct: 5 KSLVIASAALLPFSATAFAADAIQEQP-------PVPAPVEMAPQYSWAGGYTGLYLGYG 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ K + G G N Q + FV+G+ + T L+ K
Sbjct: 58 WNKAKTDTVGTVKPDDMK----AGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQ 113
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ V N G
Sbjct: 114 GFEGSLRARLGYDLNPVMPYITAGVAGSQVKLD-----------NGFDDESKFRVGWTAG 162
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + N E V K + H +G+ F
Sbjct: 163 AGLEAKLTDNILGRVEYRYTQFGNKTYDLGN-----ESVRNKLDTHDIRVGVGYKF 213
>gi|225627449|ref|ZP_03785486.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|260563986|ref|ZP_05834472.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. 16M]
gi|260566481|ref|ZP_05836951.1| outer membrane protein 25b [Brucella suis bv. 4 str. 40]
gi|261758166|ref|ZP_06001875.1| outer membrane protein 25b [Brucella sp. F5/99]
gi|265999479|ref|ZP_05466559.2| outer membrane protein 25b [Brucella melitensis bv. 2 str. 63/9]
gi|294852320|ref|ZP_06792993.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|225617454|gb|EEH14499.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|260154002|gb|EEW89094.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. 16M]
gi|260155999|gb|EEW91079.1| outer membrane protein 25b [Brucella suis bv. 4 str. 40]
gi|261738150|gb|EEY26146.1| outer membrane protein 25b [Brucella sp. F5/99]
gi|263094215|gb|EEZ18092.1| outer membrane protein 25b [Brucella melitensis bv. 2 str. 63/9]
gi|294820909|gb|EFG37908.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 243
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 70/213 (32%), Gaps = 16/213 (7%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + L+D + G+ G+N +
Sbjct: 36 QEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSD-EDTSIRVKPDGFLGGLYAGYNFDMG 94
Query: 101 D-FVFGINCHTTAAKDDST----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+ FV G++ T D++ + K G V + G ++D + Y G
Sbjct: 95 NNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAG 154
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G V +S D ++ + G G+DY ++ + YRY +
Sbjct: 155 GVAFGNVKNSVSLT---DGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYG 211
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + VE K H LG+ F
Sbjct: 212 HKDFSVVDGDLSVE-ARNKFKTHDIRLGVAYKF 243
>gi|121602149|ref|YP_989467.1| omp25/ropB family outer membrane protein [Bartonella bacilliformis
KC583]
gi|120614326|gb|ABM44927.1| outer membrane protein, omp25/ropB family [Bartonella bacilliformis
KC583]
Length = 281
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 43/287 (14%), Positives = 85/287 (29%), Gaps = 55/287 (19%)
Query: 4 NGYGALFFVVFLSIVVPNHSLAVD-LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLH 62
N L + +++ P+ A D + + R + A N + D W G Y G+
Sbjct: 2 NKKNVLLSLCVVAVSSPSLVQAADTVVVSRAVSKTQTAQNAMSVVDHSDLSWGGLYFGVQ 61
Query: 63 ISRLYETHPLA-------DTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK 114
+ + L D + +T L G LG N++ V G++ +
Sbjct: 62 VGGISGNLSLNRKAVSGEDKSSSETLPKLSGFIGGFYLGSNVEFGGGLVVGVDTDVVWSN 121
Query: 115 ------------------------------------DDSTFYRLKEKYFIYGDVVLKAGY 138
D Y + K G ++ G
Sbjct: 122 QKYKQLSDPIHVDEEVLKLHQALMSDYGHNSNSLKIGDKIAYNVTRKTNWIGATRIRFGL 181
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF---DGHGSSVVLGIGLDYMVNY 195
+ + ++ Y GG + + +V + + F LG G ++++
Sbjct: 182 AGERMMPYVAGGIAYTQLQVTPWFEVTPTKGEVSSIDFMNDKKTMVGYTLGAGFEFLMTD 241
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D+ L YR+ + +K + +G+ F
Sbjct: 242 DVILRTEYRHSDFGKKNFLKDTSK-------VSYKTNDVRIGVAYKF 281
>gi|157310311|emb|CAN43867.1| outer membrane protein 25b [Brucella microti CCM 4915]
gi|157310313|emb|CAN43868.1| outer membrane protein 25b [Brucella microti]
Length = 245
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 70/213 (32%), Gaps = 16/213 (7%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + L+D + G+ G+N +
Sbjct: 38 QEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSD-EDTSIRVKPDGFLGGLYAGYNFDMG 96
Query: 101 D-FVFGINCHTTAAKDDST----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+ FV G++ T D++ + K G V + G ++D + Y G
Sbjct: 97 NNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAG 156
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G V +S D ++ + G G+DY ++ + YRY +
Sbjct: 157 GVAFGNVKNSVSLT---DGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYG 213
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + VE K H LG+ F
Sbjct: 214 HKDFSVVDGDLSVE-ARNKFKTHDIRLGVAYKF 245
>gi|265994897|ref|ZP_06107454.1| outer membrane protein 25b [Brucella melitensis bv. 3 str. Ether]
gi|262766010|gb|EEZ11799.1| outer membrane protein 25b [Brucella melitensis bv. 3 str. Ether]
Length = 236
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 70/213 (32%), Gaps = 16/213 (7%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + L+D + G+ G+N +
Sbjct: 29 QEPAPVVVAPTFTWNGAYLGGQIGYGWGHSTLSD-EDTSIRVKPDGFLGGLYAGYNFDMG 87
Query: 101 D-FVFGINCHTTAAKDDST----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+ FV G++ T D++ + K G V + G ++D + Y G
Sbjct: 88 NNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAG 147
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G V +S D ++ + G G+DY ++ + YRY +
Sbjct: 148 GVAFGNVKNSVSLT---DGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYG 204
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + VE K H LG+ F
Sbjct: 205 HKDFSVVDGDLSVE-ARNKFKTHDIRLGVAYKF 236
>gi|209885046|ref|YP_002288903.1| hypothetical protein OCAR_5916 [Oligotropha carboxidovorans OM5]
gi|209873242|gb|ACI93038.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 574
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 85/269 (31%), Gaps = 39/269 (14%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
G G +F + +LA R+ + + + V + W+G Y+G H+
Sbjct: 2 GRGVVFKTKTALACLAVSALAFTNVEAREARVVPVSASPVLW------NWTGFYLGAHLG 55
Query: 65 RLYETHPLADTINRKTYNSL---LPNGLGIELGHNIQL--EDFVFGINCHTTAAKDDSTF 119
+ T + + Y G++ G+N Q +VFG+ +A D T
Sbjct: 56 AGFGTSKVDNPYGPSIYGDTIRLPGGFAGLQGGYNWQGAGSPWVFGVEADVSAVNADGTN 115
Query: 120 -----------YRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVE 165
+ + G + + G ++ L Y GG D SL
Sbjct: 116 TCLAYSGQFVSANCRARQQAMGSITGRIGRTISPDGRTLAYIKGGTAFMS-GDLSLTTNA 174
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
D +LG GL++ + S+ A Y Y V +
Sbjct: 175 PDYILQPSSERRDTRWGWMLGAGLEHAITGAWSVKAEYAYANFGHRDVMAPGGGFLMTPF 234
Query: 226 D-------------RKGNAHIASLGINMH 241
D ++H+ LG+N H
Sbjct: 235 DPGSLVNTTGLPTRASLDSHLVRLGLNYH 263
>gi|17987290|ref|NP_539924.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23501854|ref|NP_697981.1| outer membrane protein [Brucella suis 1330]
gi|163843239|ref|YP_001627643.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225852477|ref|YP_002732710.1| porin [Brucella melitensis ATCC 23457]
gi|254704272|ref|ZP_05166100.1| porin [Brucella suis bv. 3 str. 686]
gi|254706827|ref|ZP_05168655.1| porin [Brucella pinnipedialis M163/99/10]
gi|256061069|ref|ZP_05451225.1| porin [Brucella neotomae 5K33]
gi|256369396|ref|YP_003106904.1| outer membrane protein, putative [Brucella microti CCM 4915]
gi|260168691|ref|ZP_05755502.1| outer membrane protein, putative [Brucella sp. F5/99]
gi|261314294|ref|ZP_05953491.1| outer membrane protein 25b [Brucella pinnipedialis M163/99/10]
gi|261325071|ref|ZP_05964268.1| outer membrane protein 25b [Brucella neotomae 5K33]
gi|261754939|ref|ZP_05998648.1| outer membrane protein 25b [Brucella suis bv. 3 str. 686]
gi|265991062|ref|ZP_06103619.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. Rev.1]
gi|17982969|gb|AAL52188.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23347791|gb|AAN29896.1| outer membrane protein, putative [Brucella suis 1330]
gi|46251214|gb|AAS84578.1| Omp25b [Brucella neotomae]
gi|163673962|gb|ABY38073.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225640842|gb|ACO00756.1| porin [Brucella melitensis ATCC 23457]
gi|255999556|gb|ACU47955.1| outer membrane protein, putative [Brucella microti CCM 4915]
gi|261301051|gb|EEY04548.1| outer membrane protein 25b [Brucella neotomae 5K33]
gi|261303320|gb|EEY06817.1| outer membrane protein 25b [Brucella pinnipedialis M163/99/10]
gi|261744692|gb|EEY32618.1| outer membrane protein 25b [Brucella suis bv. 3 str. 686]
gi|263001846|gb|EEZ14421.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. Rev.1]
gi|326408994|gb|ADZ66059.1| porin [Brucella melitensis M28]
Length = 236
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 70/213 (32%), Gaps = 16/213 (7%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + L+D + G+ G+N +
Sbjct: 29 QEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSD-EDTSIRVKPDGFLGGLYAGYNFDMG 87
Query: 101 D-FVFGINCHTTAAKDDST----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+ FV G++ T D++ + K G V + G ++D + Y G
Sbjct: 88 NNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAG 147
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G V +S D ++ + G G+DY ++ + YRY +
Sbjct: 148 GVAFGNVKNSVSLT---DGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYG 204
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + VE K H LG+ F
Sbjct: 205 HKDFSVVDGDLSVE-ARNKFKTHDIRLGVAYKF 236
>gi|256113516|ref|ZP_05454350.1| porin [Brucella melitensis bv. 3 str. Ether]
Length = 240
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 70/213 (32%), Gaps = 16/213 (7%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + L+D + G+ G+N +
Sbjct: 33 QEPAPVVVAPTFTWNGAYLGGQIGYGWGHSTLSD-EDTSIRVKPDGFLGGLYAGYNFDMG 91
Query: 101 D-FVFGINCHTTAAKDDST----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+ FV G++ T D++ + K G V + G ++D + Y G
Sbjct: 92 NNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAG 151
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G V +S D ++ + G G+DY ++ + YRY +
Sbjct: 152 GVAFGNVKNSVSLT---DGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYG 208
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + VE K H LG+ F
Sbjct: 209 HKDFSVVDGDLSVE-ARNKFKTHDIRLGVAYKF 240
>gi|256044638|ref|ZP_05447542.1| porin [Brucella melitensis bv. 1 str. Rev.1]
gi|326538706|gb|ADZ86921.1| porin [Brucella melitensis M5-90]
Length = 240
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 70/213 (32%), Gaps = 16/213 (7%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + L+D + G+ G+N +
Sbjct: 33 QEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSD-EDTSIRVKPDGFLGGLYAGYNFDMG 91
Query: 101 D-FVFGINCHTTAAKDDST----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+ FV G++ T D++ + K G V + G ++D + Y G
Sbjct: 92 NNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAG 151
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G V +S D ++ + G G+DY ++ + YRY +
Sbjct: 152 GVAFGNVKNSVSLT---DGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYG 208
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + VE K H LG+ F
Sbjct: 209 HKDFSVVDGDLSVE-ARNKFKTHDIRLGVAYKF 240
>gi|86749852|ref|YP_486348.1| hypothetical protein RPB_2735 [Rhodopseudomonas palustris HaA2]
gi|86572880|gb|ABD07437.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 570
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 85/267 (31%), Gaps = 45/267 (16%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
++F++ + S A DL P W+G YVG H+ +
Sbjct: 4 SVFYLSAALLTPSGTSQAADLARPAA------------PLAGAVWTWTGFYVGAHLGAGF 51
Query: 68 ETHPLADTINRKTYNS---LLPNGLGIELGHNIQL--EDFVFGINCHTTAAKDDST---- 118
T + + Y + G++ G+N Q+ +V GI +A D T
Sbjct: 52 GTVKVDNPYGPSIYGDTIRVPKALAGLQAGYNWQVPGSPWVLGIELDASALDADGTDTCL 111
Query: 119 -------FYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ + G V + G L Y GG D ++ D
Sbjct: 112 AYSGQFVSANCRVREHALGTVTGRIGRVFGPQGRSLAYLKGGAAVL-AGDLTMTTNAVDY 170
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA---------- 218
+ D +G GL+Y ++ ++ A Y Y +++ +
Sbjct: 171 LNQPAAKLDATRWGWTVGAGLEYGLSSGWTVKAEYDYAAFGRRGIDSPDGGFLQIPNDPS 230
Query: 219 ---KSDVERVDRKGNAHIASLGINMHF 242
+ + + H+ LG+N +F
Sbjct: 231 SLINTVGAATQARQDMHLVKLGLNYYF 257
>gi|23501588|ref|NP_697715.1| outer-membrane protein Omp25 [Brucella suis 1330]
gi|62289663|ref|YP_221456.1| outer-membrane protein, 25 kDa [Brucella abortus bv. 1 str. 9-941]
gi|82699590|ref|YP_414164.1| OmpA-like transmembrane domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|163842972|ref|YP_001627376.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella suis
ATCC 23445]
gi|254688973|ref|ZP_05152227.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 6 str.
870]
gi|254697107|ref|ZP_05158935.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 2 str.
86/8/59]
gi|254701484|ref|ZP_05163312.1| OmpA-like transmembrane domain protein [Brucella suis bv. 5 str.
513]
gi|254704031|ref|ZP_05165859.1| OmpA-like transmembrane domain protein [Brucella suis bv. 3 str.
686]
gi|254707067|ref|ZP_05168895.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis
M163/99/10]
gi|254709823|ref|ZP_05171634.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis
B2/94]
gi|254713826|ref|ZP_05175637.1| OmpA-like transmembrane domain protein [Brucella ceti M644/93/1]
gi|254717116|ref|ZP_05178927.1| OmpA-like transmembrane domain protein [Brucella ceti M13/05/1]
gi|254730003|ref|ZP_05188581.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 4 str.
292]
gi|256031313|ref|ZP_05444927.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis
M292/94/1]
gi|256159433|ref|ZP_05457205.1| OmpA-like transmembrane domain protein [Brucella ceti M490/95/1]
gi|256254721|ref|ZP_05460257.1| OmpA-like transmembrane domain protein [Brucella ceti B1/94]
gi|256257221|ref|ZP_05462757.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 9 str.
C68]
gi|256369135|ref|YP_003106643.1| outer-membrane protein Omp25 [Brucella microti CCM 4915]
gi|260168451|ref|ZP_05755262.1| OmpA-like transmembrane domain protein [Brucella sp. F5/99]
gi|260545586|ref|ZP_05821327.1| outer-membrane immunogenic protein [Brucella abortus NCTC 8038]
gi|260754463|ref|ZP_05866811.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260757682|ref|ZP_05870030.1| outer-membrane protein [Brucella abortus bv. 4 str. 292]
gi|260761509|ref|ZP_05873852.1| outer-membrane immunogenic protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883492|ref|ZP_05895106.1| outer-membrane immunogenic protein [Brucella abortus bv. 9 str.
C68]
gi|261218931|ref|ZP_05933212.1| outer membrane protein [Brucella ceti M13/05/1]
gi|261221901|ref|ZP_05936182.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|261314536|ref|ZP_05953733.1| outer membrane protein [Brucella pinnipedialis M163/99/10]
gi|261317361|ref|ZP_05956558.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261321570|ref|ZP_05960767.1| outer membrane protein Omp25 [Brucella ceti M644/93/1]
gi|261752028|ref|ZP_05995737.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261754686|ref|ZP_05998395.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|261757914|ref|ZP_06001623.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|265988399|ref|ZP_06100956.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
gi|265997865|ref|ZP_06110422.1| outer-membrane protein [Brucella ceti M490/95/1]
gi|3914205|sp|Q45689|OM25_BRUSU RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|68067868|sp|Q44664|OM25_BRUAB RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457937|gb|AAB36695.1| 25 kDa outer membrane protein [Brucella suis 1330]
gi|23347502|gb|AAN29630.1| outer-membrane protein Omp25 [Brucella suis 1330]
gi|46251178|gb|AAS84560.1| Omp25 [Brucella ceti]
gi|46251180|gb|AAS84561.1| Omp25 [Brucella ceti]
gi|46251182|gb|AAS84562.1| Omp25 [Brucella pinnipedialis]
gi|46251184|gb|AAS84563.1| Omp25 [Brucella ceti]
gi|62195795|gb|AAX74095.1| outer-membrane protein, 25 kDa [Brucella abortus bv. 1 str. 9-941]
gi|82615691|emb|CAJ10678.1| OmpA-like transmembrane domain [Brucella melitensis biovar Abortus
2308]
gi|157310307|emb|CAN43865.1| outer membrane protein 25 [Brucella microti CCM 4915]
gi|157310309|emb|CAN43866.1| outer membrane protein 25 [Brucella microti]
gi|163673695|gb|ABY37806.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella suis
ATCC 23445]
gi|255999295|gb|ACU47694.1| outer-membrane protein Omp25 [Brucella microti CCM 4915]
gi|260096993|gb|EEW80868.1| outer-membrane immunogenic protein [Brucella abortus NCTC 8038]
gi|260668000|gb|EEX54940.1| outer-membrane protein [Brucella abortus bv. 4 str. 292]
gi|260671941|gb|EEX58762.1| outer-membrane immunogenic protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674571|gb|EEX61392.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260873020|gb|EEX80089.1| outer-membrane immunogenic protein [Brucella abortus bv. 9 str.
C68]
gi|260920485|gb|EEX87138.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|260924020|gb|EEX90588.1| outer membrane protein [Brucella ceti M13/05/1]
gi|261294260|gb|EEX97756.1| outer membrane protein Omp25 [Brucella ceti M644/93/1]
gi|261296584|gb|EEY00081.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261303562|gb|EEY07059.1| outer membrane protein [Brucella pinnipedialis M163/99/10]
gi|261737898|gb|EEY25894.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|261741781|gb|EEY29707.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261744439|gb|EEY32365.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|262552333|gb|EEZ08323.1| outer-membrane protein [Brucella ceti M490/95/1]
gi|264660596|gb|EEZ30857.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
Length = 213
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 5 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 58 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQ 113
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 114 GFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAG 162
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +GI F
Sbjct: 163 AGLEAKLTDNILGRVEYRYTQYGNKNYDLAG-----TTVRNKLDTQDIRVGIGYKF 213
>gi|254701730|ref|ZP_05163558.1| porin [Brucella suis bv. 5 str. 513]
gi|261752281|ref|ZP_05995990.1| outer membrane protein 25b [Brucella suis bv. 5 str. 513]
gi|261742034|gb|EEY29960.1| outer membrane protein 25b [Brucella suis bv. 5 str. 513]
Length = 236
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 69/213 (32%), Gaps = 16/213 (7%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + L+D + G+ G+N +
Sbjct: 29 QEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSD-EDTSIRVKPDGFLGGLYAGYNFDMG 87
Query: 101 D-FVFGINCHTTAAKDDST----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+ FV G++ T D++ + K G V + ++D + Y G
Sbjct: 88 NNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMSVAMDRWMPYIAG 147
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G V +S D ++ + G G+DY ++ + YRY +
Sbjct: 148 GVAFGNVKNSVSLT---DGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYG 204
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + VE K H LG+ F
Sbjct: 205 HKDFSVVDGDLSVE-ARNKFKTHDIRLGVAYKF 236
>gi|254693454|ref|ZP_05155282.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 3 str.
Tulya]
gi|261213709|ref|ZP_05927990.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260915316|gb|EEX82177.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
Length = 213
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 5 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 58 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQ 113
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 114 GFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAG 162
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +GI F
Sbjct: 163 AGLEAKLTDNILGRVEYRYTQYGNKNYDLAG-----TTVRTKLDTQDIRVGIGYKF 213
>gi|306842032|ref|ZP_07474705.1| OmpA-like transmembrane domain protein [Brucella sp. BO2]
gi|306287873|gb|EFM59293.1| OmpA-like transmembrane domain protein [Brucella sp. BO2]
Length = 213
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 5 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 58 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQ 113
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 114 GFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAG 162
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +G+ F
Sbjct: 163 AGLEAKLTDNILGRVEYRYTQYGNKNYDLAG-----TTVRNKLDTQDIRVGLGYKF 213
>gi|254718838|ref|ZP_05180649.1| OmpA-like transmembrane domain protein [Brucella sp. 83/13]
gi|265983822|ref|ZP_06096557.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306838760|ref|ZP_07471594.1| OmpA-like transmembrane domain protein [Brucella sp. NF 2653]
gi|306843662|ref|ZP_07476262.1| OmpA-like transmembrane domain protein [Brucella sp. BO1]
gi|206596726|emb|CAQ68393.1| outer membrane protein 25 [Brucella sp. BO1]
gi|264662414|gb|EEZ32675.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306275972|gb|EFM57681.1| OmpA-like transmembrane domain protein [Brucella sp. BO1]
gi|306406162|gb|EFM62407.1| OmpA-like transmembrane domain protein [Brucella sp. NF 2653]
Length = 213
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 5 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 58 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQ 113
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 114 GFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAG 162
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +GI F
Sbjct: 163 AGLEAKLTDNILGRVEYRYTQYGNKNYDLAGTN-----VRNKLDTQDIRVGIGYKF 213
>gi|161618670|ref|YP_001592557.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella canis
ATCC 23365]
gi|161335481|gb|ABX61786.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella canis
ATCC 23365]
Length = 213
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 5 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 58 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQ 113
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 114 GFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAG 162
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +GI F
Sbjct: 163 AGLEAKLTDNILGRVEYRYTQYGNKNYDLAG-----TTVRNKLDTQDIRVGIGYKF 213
>gi|154246089|ref|YP_001417047.1| porin [Xanthobacter autotrophicus Py2]
gi|154160174|gb|ABS67390.1| porin [Xanthobacter autotrophicus Py2]
Length = 255
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 66/214 (30%), Gaps = 25/214 (11%)
Query: 54 WSGNYVGLHISRLYE------THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
W+G Y+G + TH L +T +L +G +G+N Q+ + V G+
Sbjct: 42 WTGFYIGAQGGYAWADNSFSNTHDLYNTYANDASYTLDGGLVGGVIGYNYQINNIVLGVE 101
Query: 108 CHTTAAKDDSTF----------------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
A + K G + + G + D +L+Y GG
Sbjct: 102 ADANWADISGSGSVLRAGELATNCIVSNNPCSSKIDALGTITARLGVAFDRVLLYAKGGA 161
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
A V ++ + +G G+++ + S Y YI +
Sbjct: 162 AWANVKHTAGSTDYEYPEFSYSASNSNTRWGWTVGAGVEWAFFNNWSAKVEYNYIDLGSN 221
Query: 212 SVNN---SNAKSDVERVDRKGNAHIASLGINMHF 242
V N ++ GIN F
Sbjct: 222 DVTFNFVPNTYMPAYTSTADTTVNLVKAGINYRF 255
>gi|17987532|ref|NP_540166.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|225852222|ref|YP_002732455.1| OmpA-like transmembrane domain-containing protein [Brucella
melitensis ATCC 23457]
gi|256044394|ref|ZP_05447298.1| OmpA-like transmembrane domain protein [Brucella melitensis bv. 1
str. Rev.1]
gi|256264270|ref|ZP_05466802.1| outer-membrane protein Omp25 [Brucella melitensis bv. 2 str. 63/9]
gi|260563745|ref|ZP_05834231.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
16M]
gi|265990813|ref|ZP_06103370.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|3914202|sp|Q45321|OM25_BRUME RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457927|gb|AAB06701.1| 25 kDa outer membrane protein [Brucella melitensis]
gi|17983234|gb|AAL52430.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|225640587|gb|ACO00501.1| OmpA-like transmembrane domain protein [Brucella melitensis ATCC
23457]
gi|260153761|gb|EEW88853.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
16M]
gi|263001597|gb|EEZ14172.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094531|gb|EEZ18340.1| outer-membrane protein Omp25 [Brucella melitensis bv. 2 str. 63/9]
gi|326408721|gb|ADZ65786.1| OmpA-like transmembrane domain protein [Brucella melitensis M28]
gi|326538444|gb|ADZ86659.1| OmpA-like transmembrane domain protein [Brucella melitensis M5-90]
Length = 213
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 5 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 58 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQ 113
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 114 GFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAG 162
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +GI F
Sbjct: 163 AGLEAKLTDNILGRVEYRYTQYGNKNYDLAG-----TTVRNKLDTQDFRVGIGYKF 213
>gi|146343868|ref|YP_001208916.1| putative outer membrane protein [Bradyrhizobium sp. ORS278]
gi|146196674|emb|CAL80701.1| putative outer membrane protein precursor [Bradyrhizobium sp.
ORS278]
Length = 278
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 92/275 (33%), Gaps = 52/275 (18%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L V L I + A DL A W+G Y G +I
Sbjct: 7 KTLASAVSLLIASSLSTFAADL----------SARYTKAPPPAAIYNWTGGYFGGNIGYG 56
Query: 67 YETHPLADTINRKTY-----------------NSLLPNGL--GIELGHNIQLEDFVFGIN 107
+ L T+++ + N L P+G+ G++ G+N Q VFGI
Sbjct: 57 WGRSNLGTTLDQTSSWATEPVPFQNQFVAISNNRLNPSGVVGGLQAGYNWQAGPSVFGIE 116
Query: 108 CHTTAAKDDST------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
+ + + + + + +AGY++D+ L+Y GG
Sbjct: 117 ADINGSGVNKRVVYTGVNVPTTRTFNESIRNDWFMTLRGRAGYAIDTTLLYVTGGLAVGN 176
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
V S + S N N G D + +G G+++ + ++ A Y Y + +
Sbjct: 177 VKGS--WDLTSGNGYNKTGSADQTRAGWTIGAGVEHAFAPNWTVKAEYLYTDLGSINYTS 234
Query: 216 SNAKSD---------VERVDRKGNAHIASLGINMH 241
VER+ + H +G+N
Sbjct: 235 GYVPGSTFAPPGFNYVERLSQDFTFHTVRIGVNYK 269
>gi|3914201|sp|Q45110|OM25_BRUCA RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457931|gb|AAB36692.1| 25 kDa outer membrane protein [Brucella canis]
Length = 213
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 5 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 58 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQ 113
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 114 GFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDGESKFRVGWTAG 162
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +GI F
Sbjct: 163 AGLEAKLTDNILGRVEYRYTQYSNKNYDLAG-----TTVRNKLDTQDIRVGIGYKF 213
>gi|256060827|ref|ZP_05450987.1| OmpA-like transmembrane domain protein [Brucella neotomae 5K33]
gi|261324818|ref|ZP_05964015.1| outer-membrane protein Omp25 [Brucella neotomae 5K33]
gi|3914203|sp|Q45326|OM25_BRUNE RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457935|gb|AAB36694.1| 25 kDa outer membrane protein [Brucella neotomae]
gi|261300798|gb|EEY04295.1| outer-membrane protein Omp25 [Brucella neotomae 5K33]
Length = 213
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 5 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 58 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQ 113
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 114 GFEGSLRARVGYDLNLVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAG 162
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +GI F
Sbjct: 163 AGLEAKLTDNILGRVEYRYTQYGNKNYDLAG-----TTVRNKLDTQDIRVGIGYKF 213
>gi|256113236|ref|ZP_05454104.1| OmpA-like transmembrane domain protein [Brucella melitensis bv. 3
str. Ether]
gi|265994648|ref|ZP_06107205.1| outer-membrane immunogenic protein [Brucella melitensis bv. 3 str.
Ether]
gi|262765761|gb|EEZ11550.1| outer-membrane immunogenic protein [Brucella melitensis bv. 3 str.
Ether]
Length = 213
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 5 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 58 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQ 113
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 114 GFEGSLRARVGYDLNPVMPYLTAGIVGSQIKLN-----------NGLDDESKFRVGWTAG 162
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +GI F
Sbjct: 163 AGLEAKLTDNILGRVEYRYTQYGNKNYDLAG-----TTVRNKLDTQDFRVGIGYKF 213
>gi|260466904|ref|ZP_05813087.1| porin [Mesorhizobium opportunistum WSM2075]
gi|259029300|gb|EEW30593.1| porin [Mesorhizobium opportunistum WSM2075]
Length = 238
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 77/230 (33%), Gaps = 24/230 (10%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLL------P 86
+ + + AD NV D WSG Y+G + + T +++
Sbjct: 13 PVGMASAADTNVVLPGDTTYNWSGAYIGAQAGYAWANARVGQTFAPGSFDDYGWGYNPSG 72
Query: 87 NGLGIELGHNIQLED-FVFGINCHTTAAKDDSTF-----------YRLKEKYFIYGDVVL 134
G+ G N Q + V GI + A T + + K G + L
Sbjct: 73 GFGGLYAGVNHQFDSGLVLGIEADYSFAGVKDTTHYRALGVDDPAFGGELKLDTVGSLRL 132
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+AGY+VD L + GG A +++ S G + LG G +Y V
Sbjct: 133 RAGYAVDRWLPFVTGGLAVASYKHTTVNLPGS----TPYADVKGTVAGYTLGAGAEYAVT 188
Query: 195 YDISLSASYRYIPHHIHSVNNSN--AKSDVERVDRKGNAHIASLGINMHF 242
+ + YR+ H+ + + + H +G+ F
Sbjct: 189 DNWLVRGEYRFADFGRHTSVRHSLVNGAPLNPDAVDLTTHDLRIGVAYKF 238
>gi|769745|emb|CAA55872.1| immunogenic protein [Brucella abortus]
gi|89741444|gb|ABD77595.1| 25 kDa outer membrane protein [Brucella abortus]
Length = 213
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 5 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + L+ K
Sbjct: 58 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQ 113
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 114 GFEGSLGARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAG 162
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + + + + V K + +GI F
Sbjct: 163 AGLEAKLTDNILGRVEYRYTQYGNKNYDLAG-----TTVRNKLDTQDIRVGIGYKF 213
>gi|319405138|emb|CBI78744.1| Pap31 [Bartonella sp. AR 15-3]
Length = 278
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 89/291 (30%), Gaps = 69/291 (23%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
L ++++ + A D+ +P+++ W+G Y G I
Sbjct: 3 IKCLMTASVVALMTASAVQAADITVPQEVGETIVVAPAFS--------WTGFYFGGQIGG 54
Query: 66 LYETHPLA----------DTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHT---- 110
+ D++N+ ++ G G N+ L + + G++
Sbjct: 55 FSSKTSFSSRDAEDLNKWDSLNKALWSKPSGFMGGFYAGSNVDLGNGLILGVDTDIVLSG 114
Query: 111 ---------------------------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSL 143
A + + T Y K G ++ G++ D +
Sbjct: 115 QKDTKEHTVAVELKDQNAKQQREEQPENAKEAEITKYNHTLKEKWAGATRVRIGFAADRI 174
Query: 144 LIYGMGGFGGAYVIDSSLEKV------------ESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ Y GG + D+ V +S+ L G+D+
Sbjct: 175 MPYVAGGVAYTQLQDTLETSVSQGKMPVQRNDETETSSQTNTVDESKTMIGYTLAAGVDF 234
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ L A YRY ++N ++++ A+ +G+ F
Sbjct: 235 AMTDNVMLRAEYRYSDFGKKKLHN-------DKLEVSYKANDFRVGVAYKF 278
>gi|254470094|ref|ZP_05083498.1| outer membrane protein [Pseudovibrio sp. JE062]
gi|211960405|gb|EEA95601.1| outer membrane protein [Pseudovibrio sp. JE062]
Length = 221
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 19/226 (8%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTIN 77
++ SLA DL P+ + + WSG Y+G + + + +
Sbjct: 14 LMAGTSLAADL--PQPVQPSQPEISYETPATFSAYDWSGAYIGANAGWGFLSADGKSGAS 71
Query: 78 RKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ G+ G+N + V G + ++ + V +A
Sbjct: 72 GALDDDQNGVTAGVHAGYNFMVAPSVVLGAEADIQYNDLEEKSAGVELQSDWNATVRARA 131
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY++D L+YG GG + +K++ G+ + V+G G+++ V
Sbjct: 132 GYALDRTLVYGTGGAAFKDL-----------TAKSSAGKDEKTAIGYVVGAGVEHAVTDT 180
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ Y Y + K + ++ G++M F
Sbjct: 181 LTARLEYLYQDFGDQKFDFGG-----TTEKTKIDENLVRAGVSMKF 221
>gi|265984654|ref|ZP_06097389.1| outer membrane protein 31b [Brucella sp. 83/13]
gi|264663246|gb|EEZ33507.1| outer membrane protein 31b [Brucella sp. 83/13]
Length = 261
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 92/263 (34%), Gaps = 45/263 (17%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET- 69
+ ++++ + ++A D+ + + W+G Y+G++
Sbjct: 13 LLASVAMLFTSSAMAADIIVAEPAP-----------VAVDTFSWTGGYIGINAGYAGGKF 61
Query: 70 -HPLAD-------TINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK------ 114
HP +D + + G++ G+N QL + V G +
Sbjct: 62 KHPFSDVEPDRGEDFSGSLDVTASGFVGGVQAGYNWQLANGIVLGGEADFQGSTVKSKLV 121
Query: 115 --------------DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDS 159
+ L+ K +G V + G++ + L++YG GG V S
Sbjct: 122 DNGDLSDVGVAGNLSGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTS 181
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ ++ + LG G++Y V + +L + Y Y S N + +
Sbjct: 182 LSAYDDGESFS---AGNSKTKAGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEE 238
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ ++ K N H +G+N F
Sbjct: 239 NVNVNMENKVNFHTVRIGLNYKF 261
>gi|239830970|ref|ZP_04679299.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
gi|239823237|gb|EEQ94805.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
Length = 240
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 62/212 (29%), Gaps = 21/212 (9%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + + G+ G+N L
Sbjct: 40 QEPAPVVVAPSFTWTGAYIGGQIGYGWGKSNFDGDVFSYGDVKPDGFLGGVYAGYNFDLG 99
Query: 101 D-FVFGINCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ V GI+ T D + K G V + GY+VD + Y GG
Sbjct: 100 NNIVLGIDGDVTYNDVSKDIDVFDGDLAVGDFETKLRWSGAVRARVGYAVDRFMPYLAGG 159
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ +S + G G+DY ++ + YRY +
Sbjct: 160 VAFGNIKNSGSID------GIGSFSESKTLTGWTAGAGVDYAATDNLIVRLEYRYTDYGD 213
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ +++ + LG+ F
Sbjct: 214 KDIDFGGLN-----INQDFKTNEVRLGVAYKF 240
>gi|254719645|ref|ZP_05181456.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13]
gi|306837721|ref|ZP_07470589.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
gi|306407177|gb|EFM63388.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
Length = 253
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 92/263 (34%), Gaps = 45/263 (17%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET- 69
+ ++++ + ++A D+ + + W+G Y+G++
Sbjct: 5 LLASVAMLFTSSAMAADIIVAEPAP-----------VAVDTFSWTGGYIGINAGYAGGKF 53
Query: 70 -HPLAD-------TINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK------ 114
HP +D + + G++ G+N QL + V G +
Sbjct: 54 KHPFSDVEPDRGEDFSGSLDVTASGFVGGVQAGYNWQLANGIVLGGEADFQGSTVKSKLV 113
Query: 115 --------------DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDS 159
+ L+ K +G V + G++ + L++YG GG V S
Sbjct: 114 DNGDLSDVGVAGNLSGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTS 173
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ ++ + LG G++Y V + +L + Y Y S N + +
Sbjct: 174 LSAYDDGESFS---AGNSKTKAGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEE 230
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ ++ K N H +G+N F
Sbjct: 231 NVNVNMENKVNFHTVRIGLNYKF 253
>gi|13470965|ref|NP_102534.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14021708|dbj|BAB48320.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 226
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 71/217 (32%), Gaps = 24/217 (11%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETH------PLADTINRKTYNSLLPNGLGIEL 93
A + + + WSG YVG I + P TI G+++
Sbjct: 20 AADAISAEPATAHDWSGVYVGGQIGYGFGKTDATYNLPNTPTIRGSQDYDTDGFLGGVQI 79
Query: 94 GHNIQLEDFVFGINCHTTAAK--------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLI 145
G+N Q+ V G+ + A R K +G + +AGY+ D LI
Sbjct: 80 GYNYQINSAVLGVEADVSGADIKGHSDEITSGLGDRYDTKVDWFGTLRARAGYAFDRTLI 139
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
YG GG V + ++ +G GL+ + S Y+Y
Sbjct: 140 YGTGGLAFGSVENRYVDGPFD------TFSEKNTKVGWTIGAGLEQAITDHWSAKFEYQY 193
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +++ + + +G+N F
Sbjct: 194 VDLRDQTIDYA----PNSNTTFDNTFNAVKIGMNYKF 226
>gi|62290498|ref|YP_222291.1| Omp31-1, outer membrane protein, 31 kDa [Brucella abortus bv. 1
str. 9-941]
gi|82700421|ref|YP_414995.1| OmpA-like transmembrane domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|237816005|ref|ZP_04595002.1| OmpA-like transmembrane domain protein [Brucella abortus str. 2308
A]
gi|260547029|ref|ZP_05822768.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260755331|ref|ZP_05867679.1| outer membrane protein 31b [Brucella abortus bv. 6 str. 870]
gi|260758554|ref|ZP_05870902.1| outer membrane protein 31b [Brucella abortus bv. 4 str. 292]
gi|260762376|ref|ZP_05874719.1| outer membrane protein 31b [Brucella abortus bv. 2 str. 86/8/59]
gi|260884349|ref|ZP_05895963.1| Omp31b [Brucella abortus bv. 9 str. C68]
gi|261214598|ref|ZP_05928879.1| outer membrane protein 31b [Brucella abortus bv. 3 str. Tulya]
gi|297248879|ref|ZP_06932597.1| Omp31b [Brucella abortus bv. 5 str. B3196]
gi|46251194|gb|AAS84568.1| Omp31b [Brucella abortus]
gi|62196630|gb|AAX74930.1| Omp31-1, outer membrane protein, 31 kDa [Brucella abortus bv. 1
str. 9-941]
gi|82616522|emb|CAJ11595.1| OmpA-like transmembrane domain [Brucella melitensis biovar Abortus
2308]
gi|237789303|gb|EEP63514.1| OmpA-like transmembrane domain protein [Brucella abortus str. 2308
A]
gi|260096079|gb|EEW79956.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260668872|gb|EEX55812.1| outer membrane protein 31b [Brucella abortus bv. 4 str. 292]
gi|260672808|gb|EEX59629.1| outer membrane protein 31b [Brucella abortus bv. 2 str. 86/8/59]
gi|260675439|gb|EEX62260.1| outer membrane protein 31b [Brucella abortus bv. 6 str. 870]
gi|260873877|gb|EEX80946.1| Omp31b [Brucella abortus bv. 9 str. C68]
gi|260916205|gb|EEX83066.1| outer membrane protein 31b [Brucella abortus bv. 3 str. Tulya]
gi|297176048|gb|EFH35395.1| Omp31b [Brucella abortus bv. 5 str. B3196]
Length = 261
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 45/263 (17%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET- 69
+ ++++ + ++A D+ + + W+G Y+G++
Sbjct: 13 LLASVAMLFTSSAMAADIIVAEPAP-----------VAVDTFSWTGGYIGINAGYAGGKF 61
Query: 70 --------HPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK------ 114
A + + G++ G+N QL + V G +
Sbjct: 62 KHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLV 121
Query: 115 --------------DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDS 159
+ L+ K +G V + G++ + L++YG GG V S
Sbjct: 122 DNGDLSDIGVAGNLSGDESFVLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTS 181
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ ++ + LG G++Y V + +L + Y Y S N + +
Sbjct: 182 LSAYDDGESFS---AGNSKTKAGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEE 238
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ ++ K N H LG+N F
Sbjct: 239 NVNINMENKVNFHTVRLGLNYKF 261
>gi|23502485|ref|NP_698612.1| outer membrane protein Omp31 [Brucella suis 1330]
gi|163843871|ref|YP_001628275.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225628052|ref|ZP_03786088.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|256370036|ref|YP_003107547.1| outer membrane protein Omp31 [Brucella microti CCM 4915]
gi|260169279|ref|ZP_05756090.1| outer membrane protein Omp31 [Brucella sp. F5/99]
gi|260565895|ref|ZP_05836365.1| outer membrane protein 31b [Brucella suis bv. 4 str. 40]
gi|261219740|ref|ZP_05934021.1| outer membrane protein 31b [Brucella ceti M13/05/1]
gi|261222753|ref|ZP_05937034.1| outer membrane protein 31b [Brucella ceti B1/94]
gi|261315779|ref|ZP_05954976.1| outer membrane protein 31b [Brucella pinnipedialis M163/99/10]
gi|261318224|ref|ZP_05957421.1| outer membrane protein 31b [Brucella pinnipedialis B2/94]
gi|261322630|ref|ZP_05961827.1| outer membrane protein 31b [Brucella ceti M644/93/1]
gi|261325677|ref|ZP_05964874.1| outer membrane protein 31b [Brucella neotomae 5K33]
gi|261752901|ref|ZP_05996610.1| outer membrane protein 31b [Brucella suis bv. 5 str. 513]
gi|261755562|ref|ZP_05999271.1| outer membrane protein 31b [Brucella suis bv. 3 str. 686]
gi|261758791|ref|ZP_06002500.1| outer membrane protein 31b [Brucella sp. F5/99]
gi|265989255|ref|ZP_06101812.1| outer membrane protein 31b [Brucella pinnipedialis M292/94/1]
gi|265998716|ref|ZP_06111273.1| outer membrane protein 31b [Brucella ceti M490/95/1]
gi|294852932|ref|ZP_06793605.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|23348478|gb|AAN30527.1| outer membrane protein Omp31 [Brucella suis 1330]
gi|46251200|gb|AAS84571.1| Omp31b [Brucella neotomae]
gi|46251202|gb|AAS84572.1| Omp31b [Brucella pinnipedialis]
gi|46251204|gb|AAS84573.1| Omp31b [Brucella ceti]
gi|46251206|gb|AAS84574.1| Omp31b [Brucella ceti]
gi|46251208|gb|AAS84575.1| Omp31b [Brucella ceti]
gi|157310319|emb|CAN43873.1| outer membrane protein 31b [Brucella microti CCM 4915]
gi|157310321|emb|CAN43874.1| outer membrane protein 31b [Brucella microti]
gi|163674594|gb|ABY38705.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225617215|gb|EEH14261.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|256000199|gb|ACU48598.1| outer membrane protein Omp31 [Brucella microti CCM 4915]
gi|260155413|gb|EEW90493.1| outer membrane protein 31b [Brucella suis bv. 4 str. 40]
gi|260921337|gb|EEX87990.1| outer membrane protein 31b [Brucella ceti B1/94]
gi|260924829|gb|EEX91397.1| outer membrane protein 31b [Brucella ceti M13/05/1]
gi|261295320|gb|EEX98816.1| outer membrane protein 31b [Brucella ceti M644/93/1]
gi|261297447|gb|EEY00944.1| outer membrane protein 31b [Brucella pinnipedialis B2/94]
gi|261301657|gb|EEY05154.1| outer membrane protein 31b [Brucella neotomae 5K33]
gi|261304805|gb|EEY08302.1| outer membrane protein 31b [Brucella pinnipedialis M163/99/10]
gi|261738775|gb|EEY26771.1| outer membrane protein 31b [Brucella sp. F5/99]
gi|261742654|gb|EEY30580.1| outer membrane protein 31b [Brucella suis bv. 5 str. 513]
gi|261745315|gb|EEY33241.1| outer membrane protein 31b [Brucella suis bv. 3 str. 686]
gi|262553340|gb|EEZ09174.1| outer membrane protein 31b [Brucella ceti M490/95/1]
gi|264661452|gb|EEZ31713.1| outer membrane protein 31b [Brucella pinnipedialis M292/94/1]
gi|294821521|gb|EFG38520.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
Length = 261
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 45/263 (17%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET- 69
+ ++++ + ++A D+ + + W+G Y+G++
Sbjct: 13 LLASVAMLFTSSAMAADIIVAEPAP-----------VAVDTFSWTGGYIGINAGYAGGKF 61
Query: 70 --------HPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK------ 114
A + + G++ G+N QL + V G +
Sbjct: 62 KHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLV 121
Query: 115 --------------DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDS 159
+ L+ K +G V + G++ + L++YG GG V S
Sbjct: 122 DNGDLSDIGVAGNLSGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTS 181
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ ++ + LG G++Y V + +L + Y Y S N + +
Sbjct: 182 LSAYDDGESFS---AGNSKTKAGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEE 238
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ ++ K N H LG+N F
Sbjct: 239 NVNINMENKVNFHTVRLGLNYKF 261
>gi|319403668|emb|CBI77253.1| Hemin binding protein d [Bartonella rochalimae ATCC BAA-1498]
Length = 262
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 77/270 (28%), Gaps = 43/270 (15%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
L + + + A D+ P + + + W+G YVG I
Sbjct: 3 IKHLLVACSWTFIPVSMVQAADIMKPHQSQSYQPVPVISSSNN---FSWTGFYVGAQIGG 59
Query: 66 LYETHPLAD------------TINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTA 112
L+ + L GI G N L D + GI+
Sbjct: 60 FSGEATLSPIQDSVEEDREGQGFSEIKSPKLSGFIGGIYAGSNFSLSKDLILGIDTDMVW 119
Query: 113 AKDDST--------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE-- 162
+ +T + K G + ++ G+++D ++ Y GG + +
Sbjct: 120 SGKKNTKVFDVQDMSIDMSIKEKWAGAMRMRVGFAMDRVMPYVSGGVSYVQLQNVFTAKR 179
Query: 163 ----------KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+S+ +G G+D + ++ + A YRY
Sbjct: 180 LAKAVVRERRNTLPSDSEPKFLDETKILVGYSVGGGVDVAMTDNVIMRAEYRYSDFGKKK 239
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N VD + +G+ F
Sbjct: 240 FAKDN-------VDLSYKTNDFRVGVAYKF 262
>gi|189024724|ref|YP_001935492.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
gi|254689800|ref|ZP_05153054.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 6 str. 870]
gi|254694291|ref|ZP_05156119.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 3 str. Tulya]
gi|254697943|ref|ZP_05159771.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 2 str. 86/8/59]
gi|254730834|ref|ZP_05189412.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 4 str. 292]
gi|256258053|ref|ZP_05463589.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 9 str. C68]
gi|189020296|gb|ACD73018.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
Length = 253
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 45/263 (17%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET- 69
+ ++++ + ++A D+ + + W+G Y+G++
Sbjct: 5 LLASVAMLFTSSAMAADIIVAEPAP-----------VAVDTFSWTGGYIGINAGYAGGKF 53
Query: 70 --------HPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK------ 114
A + + G++ G+N QL + V G +
Sbjct: 54 KHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLV 113
Query: 115 --------------DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDS 159
+ L+ K +G V + G++ + L++YG GG V S
Sbjct: 114 DNGDLSDIGVAGNLSGDESFVLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTS 173
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ ++ + LG G++Y V + +L + Y Y S N + +
Sbjct: 174 LSAYDDGESFS---AGNSKTKAGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEE 230
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ ++ K N H LG+N F
Sbjct: 231 NVNINMENKVNFHTVRLGLNYKF 253
>gi|254702337|ref|ZP_05164165.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str.
513]
gi|254704867|ref|ZP_05166695.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str.
686]
gi|254708278|ref|ZP_05170106.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M163/99/10]
gi|254710652|ref|ZP_05172463.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
B2/94]
gi|254714835|ref|ZP_05176646.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1]
gi|254717892|ref|ZP_05179703.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1]
gi|256032146|ref|ZP_05445760.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M292/94/1]
gi|256061667|ref|ZP_05451806.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33]
gi|256160342|ref|ZP_05458035.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1]
gi|256255546|ref|ZP_05461082.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94]
Length = 253
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 45/263 (17%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET- 69
+ ++++ + ++A D+ + + W+G Y+G++
Sbjct: 5 LLASVAMLFTSSAMAADIIVAEPAP-----------VAVDTFSWTGGYIGINAGYAGGKF 53
Query: 70 --------HPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK------ 114
A + + G++ G+N QL + V G +
Sbjct: 54 KHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLV 113
Query: 115 --------------DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDS 159
+ L+ K +G V + G++ + L++YG GG V S
Sbjct: 114 DNGDLSDIGVAGNLSGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTS 173
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ ++ + LG G++Y V + +L + Y Y S N + +
Sbjct: 174 LSAYDDGESFSAG---NSKTKAGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEE 230
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ ++ K N H LG+N F
Sbjct: 231 NVNINMENKVNFHTVRLGLNYKF 253
>gi|158425585|ref|YP_001526877.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
gi|158332474|dbj|BAF89959.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
Length = 212
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 72/238 (30%), Gaps = 29/238 (12%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
L S++ ++A DL P A W+G Y+G +
Sbjct: 3 KSVLVTGALASLLFAAPAMAADLSRPAP------AMPASAVSAPPVFSWTGFYIGANTGY 56
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDSTFYRLKE 124
+ + + G ++G+N Q + + G+ + +
Sbjct: 57 AWGSGKGSADALGL---DPDGWFGGGQVGYNYQFQNNMLVGLEADVQGGGISAGNGPVSS 113
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K +G V + GY+VD +L Y GGF + +
Sbjct: 114 KLESFGTVRARLGYAVDRVLPYVTGGFAWGNNKITDFGT-----------SQSQTLTGWT 162
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G G++Y + + + A Y Y + A A LG+N F
Sbjct: 163 VGGGVEYALTNNWTARAEYLYTDLGKADYKALG--------EAGVAASTARLGVNYKF 212
>gi|306843011|ref|ZP_07475638.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
gi|306844622|ref|ZP_07477209.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306275066|gb|EFM56829.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306286803|gb|EFM58344.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
Length = 253
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 89/263 (33%), Gaps = 45/263 (17%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET- 69
+ ++++ + ++A D+ + + W+G Y+G++
Sbjct: 5 LLASVAMLFTSSAMAADIIVAEPAP-----------VAVDTFSWTGGYIGINAGYAGGKF 53
Query: 70 --------HPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKD----- 115
+ + + G++ G+N QL + V G +
Sbjct: 54 KHPFSGVEQDGGEDFSGSLDVTGSGFVGGVQAGYNWQLANGIVLGGEADFQGSTVKSKLV 113
Query: 116 ---------------DSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDS 159
+ L+ K +G V + G++ + L++YG GG V S
Sbjct: 114 DKGDLSDIGVAGNLDGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTS 173
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ ++ + LG G++Y V + +L + Y Y S N + +
Sbjct: 174 LSAYDDGESFS---AGNSKTKAGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEE 230
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ ++ K N H +G+N F
Sbjct: 231 NVNVNMENKVNFHTVRIGLNYKF 253
>gi|150395644|ref|YP_001326111.1| porin [Sinorhizobium medicae WSM419]
gi|150027159|gb|ABR59276.1| porin [Sinorhizobium medicae WSM419]
Length = 225
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 74/229 (32%), Gaps = 17/229 (7%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP-LADTINRK 79
+ + P ++ W+G Y+G ++
Sbjct: 7 SAAFLAGALSPVVAADLAPVESPPAISAPAAFDWNGFYLGGNVGGGRADVDWTYQPFGET 66
Query: 80 TYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF------YRLKEKYFIYGDVV 133
++ G++ G+N Q++ FV G + D Y V
Sbjct: 67 AHHDGKGFLGGVQAGYNWQIDGFVIGAEADFLGSSIDGDTPCPNPAYSCTSDTKWLSTVR 126
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+AGYS D+LL+Y GG G +++D+ G + + V G G++Y
Sbjct: 127 ARAGYSFDNLLVYATGGLGIGRFE------IKTDDGAGTSGSTIRNDTGWVAGAGVEYGF 180
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + S+ A Y + + VD +G+N F
Sbjct: 181 SPNWSIKAEYMHHDFGERTYTVDGGN----PVDADFRFDTGKIGVNYRF 225
>gi|240850131|ref|YP_002971524.1| hemin binding protein D [Bartonella grahamii as4aup]
gi|240267254|gb|ACS50842.1| hemin binding protein D [Bartonella grahamii as4aup]
Length = 272
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 81/285 (28%), Gaps = 65/285 (22%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L S++ + A D+ P V W+G Y+G I
Sbjct: 4 KYLVSTSIFSLISISVVQAADMVTPE---------QPVPVIAAPAFSWTGFYLGGQIGSF 54
Query: 67 YETHP---------LADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD 116
+ + I ++ L G+ G NI +++ F+ GI+ +
Sbjct: 55 SGKTTASYLKDETGIWNPIGKEDLPKLSGFIGGVYAGSNIDIDNGFIIGIDTDIMWSDKK 114
Query: 117 STFY-----------------------------------RLKEKYFIYGDVVLKAGYSVD 141
T R K G +K G++++
Sbjct: 115 GTKDINRPKKSQTEEASSEETNLTRDSHEEDSTIPIEAVRHTLKQKWAGATRVKVGFAIE 174
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR----FDGHGSSVVLGIGLDYMVNYDI 197
++ Y GG + + +S+N LG G+D+ + ++
Sbjct: 175 RVMPYVSGGIAYTQLQNIFGLVADSNNRAVNFSDWLHDEKKTMIGYTLGGGVDFAMTDNV 234
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ A YRY ++ + + +G+ F
Sbjct: 235 IVRAEYRYSDFGKKKF-------VHDKFEMGYKTNDFRVGVAYKF 272
>gi|158425351|ref|YP_001526643.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
gi|158332240|dbj|BAF89725.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
Length = 233
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 59/209 (28%), Gaps = 19/209 (9%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETH--PLADTINRKTYNSLLPNGLGIELGHNIQL-ED 101
W+G Y+G + + + + G ++G+N Q +
Sbjct: 33 VAPVAPVFSWTGFYIGANAGYGGDKYNYDFGVPTTATASTNSSGFFAGGQIGYNYQFANN 92
Query: 102 FVFGINCHTTAAKDDSTFY--------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
V G+ + D T +K +G V + GY+ D L Y GG
Sbjct: 93 VVLGLETDLQWSGIDGTLNTVTPGASTNIKSSLDYFGTVRARVGYAFDRFLPYITGGMAY 152
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + +G G++Y + + + Y+Y+
Sbjct: 153 GKTKTEGSQFS---RTGFTTFDDSDTKVGWTIGGGVEYAITNNWTFKTEYQYVDLGNSDY 209
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
V H G+N F
Sbjct: 210 GIGT-----NAVSVDNKFHTVRAGVNYKF 233
>gi|170750202|ref|YP_001756462.1| carbohydrate-selective porin OprB [Methylobacterium radiotolerans
JCM 2831]
gi|170656724|gb|ACB25779.1| Carbohydrate-selective porin OprB [Methylobacterium radiotolerans
JCM 2831]
Length = 708
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 54/235 (22%), Positives = 74/235 (31%), Gaps = 46/235 (19%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
V+ ++ P + A DL+ PR Q Y WSG YVGL S
Sbjct: 14 LVLTAPLLAPVAARAADLFAPRPT-----------AQAPAYTDWSGGYVGLEGSAGGSYG 62
Query: 71 -----------------PLADTINRKTYNSL-LPNGLGIELGHNIQLEDFVFGINCH--- 109
D+ R G+ G N Q +V+GI
Sbjct: 63 AYSFGPTTIGGRPVPPFKSGDSTGRSDQGKNATTATGGLFGGWNWQAGPWVYGIEASLDA 122
Query: 110 -------------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
A F ++ K +YG + + GYS D LIYG G GA
Sbjct: 123 ANLKRPVPSTIAGFGYADTTPAFNIVRAKTDLYGALRARLGYSFDRYLIYGTFGLAGANA 182
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + D R D LG G+ Y + ++L YRYI
Sbjct: 183 RILA-NYPDLDAGGQTAARRDLDYVGFTLGAGVQYAITDSLALGIDYRYIDLGGS 236
>gi|153007478|ref|YP_001368693.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151559366|gb|ABS12864.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 229
Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 63/212 (29%), Gaps = 21/212 (9%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
V WSG Y+G I + + + GI G+N L
Sbjct: 29 QEPVPVVVAPTFTWSGAYIGGQIGYGWGKSDFSGDVYSFGNVKPDGFLGGIYAGYNFDLG 88
Query: 101 D-FVFGINCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ V GI+ T D + K G V + GY+VD + Y GG
Sbjct: 89 NSIVLGIDGDVTYNDVSKDIDVYSGDLAVGDFETKLRWSGAVRARVGYAVDRFMPYLAGG 148
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ +S + G G+DY ++ + YRY +
Sbjct: 149 VAFGNIKNSGSID------GIGSFSESKTLTGWTAGAGVDYAATDNLIVRLEYRYTDYGD 202
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ V++ + LG+ F
Sbjct: 203 KDIEFGGLN-----VNQDFKTNEVRLGVAYKF 229
>gi|148558438|ref|YP_001257410.1| outer membrane protein Omp31 [Brucella ovis ATCC 25840]
gi|16611666|gb|AAL27291.1|AF366068_1 outer membrane protein Omp31 [Brucella ovis]
gi|16611669|gb|AAL27292.1|AF366069_1 outer membrane protein Omp31 [Brucella ovis]
gi|16611672|gb|AAL27293.1|AF366070_1 outer membrane protein Omp31 [Brucella ovis]
gi|16611675|gb|AAL27294.1|AF366071_1 outer membrane protein Omp31 [Brucella ovis]
gi|16611678|gb|AAL27295.1|AF366072_1 outer membrane protein Omp31 [Brucella ovis]
gi|148369723|gb|ABQ62595.1| outer membrane protein Omp31 [Brucella ovis ATCC 25840]
Length = 240
Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 87/253 (34%), Gaps = 36/253 (14%)
Query: 11 FVVFLSIVV--PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-- 66
V+ SI ++A D+ + + W+G Y+G++
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGG 54
Query: 67 -----YETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ + D + + G G++ G+N QL++ V G +
Sbjct: 55 KFKHPFSSFDKEDGEHVSGSPDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGLSVTGS 114
Query: 119 F--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K +G V + GY + + L++YG GG V D++
Sbjct: 115 ISAGASSLEGNAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDA 171
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D + LG G +Y +N + +L + Y Y ++ D ++ K
Sbjct: 172 PALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKV 227
Query: 230 NAHIASLGINMHF 242
N H +G+N F
Sbjct: 228 NFHTVRVGLNYKF 240
>gi|86749064|ref|YP_485560.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572092|gb|ABD06649.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 254
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 80/254 (31%), Gaps = 33/254 (12%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY---- 67
+V + + +LA D+ + + A W+G YVG H+ +
Sbjct: 11 LVVACGLGSSMALAADMAMKAPVKAVPYA---------PSPSWTGLYVGGHLGGGWVDET 61
Query: 68 ------ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR 121
+ L D + G++ G+N Q++++V GI +
Sbjct: 62 ATFVSSTSINLIDPLGTSYPIDHSGFLGGVQAGYNYQIQNWVIGIAGDFSWTSAKVDTVT 121
Query: 122 LK-----------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
K Y + GY+ +LL YG GG + + +
Sbjct: 122 ASLLVPGAQVHTQAKTDWYATATGRVGYAFGNLLAYGKGGAAWIHSVHGGFADFGAAGI- 180
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN--AKSDVERVDRK 228
+ +G+GL++ S+ Y Y+ + +N D K
Sbjct: 181 VPFSDVTTTRAGWTVGVGLEWAFAPHWSVFGEYNYMDFGTRTYTFTNLADGGSTSNFDVK 240
Query: 229 GNAHIASLGINMHF 242
+ + G+N F
Sbjct: 241 TSVSLVKAGVNYRF 254
>gi|306845687|ref|ZP_07478256.1| outer membrane protein Omp31 [Brucella sp. BO1]
gi|206596728|emb|CAQ68394.1| outer membrane protein 31 [Brucella sp. BO1]
gi|306274008|gb|EFM55835.1| outer membrane protein Omp31 [Brucella sp. BO1]
Length = 240
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 45/253 (17%), Positives = 83/253 (32%), Gaps = 36/253 (14%)
Query: 11 FVVFLSIVV--PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
V+ SI ++A D+ + + W+G Y+G++
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGG 54
Query: 69 THPLADTINRKTYN---------SLLPNGLGIELGHNIQLED-FVFGINCHTTA------ 112
+ N + G++ G+N Q ++ V G
Sbjct: 55 KFKHPFSAFDTDDNERVSGSLNITSGGFVGGVQAGYNWQFDNGVVLGAETDFQGSSVTGS 114
Query: 113 --AKDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
A + + K +G V + GY + + L++YG GG V D+
Sbjct: 115 ISADAGGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDV 171
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D + LG G +Y +N +L + Y Y ++ N + ++ K
Sbjct: 172 SALHTWSDKTKAGWTLGAGAEYAINNHWTLKSEYLYTDLGKRNLINVDDSF----LESKV 227
Query: 230 NAHIASLGINMHF 242
N H +G+N F
Sbjct: 228 NFHTVRVGLNYKF 240
>gi|161620493|ref|YP_001594379.1| porin [Brucella canis ATCC 23365]
gi|16611681|gb|AAL27296.1|AF366073_1 outer membrane protein Omp31 [Brucella canis]
gi|161337304|gb|ABX63608.1| porin [Brucella canis ATCC 23365]
Length = 240
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 87/253 (34%), Gaps = 36/253 (14%)
Query: 11 FVVFLSIVV--PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-- 66
V+ SI ++A D+ + + W+G Y+G++
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGG 54
Query: 67 -----YETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTA------ 112
+ + D + G G++ G+N QL++ V G
Sbjct: 55 KFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGP 114
Query: 113 --AKDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
A + + K +G V + GY + + L++YG GG V D++
Sbjct: 115 ISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDA 171
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D + LG G +Y +N + +L + Y Y ++ D ++ K
Sbjct: 172 SALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKV 227
Query: 230 NAHIASLGINMHF 242
N H +G+N F
Sbjct: 228 NFHTVRVGLNYKF 240
>gi|306844393|ref|ZP_07476983.1| outer membrane protein [Brucella sp. BO1]
gi|306275206|gb|EFM56956.1| outer membrane protein [Brucella sp. BO1]
Length = 227
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 73/247 (29%), Gaps = 30/247 (12%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
AL F + +V + A D + W+G Y+G I
Sbjct: 2 KLKALLFASTVVLVATTGANAADAVIE---------QEPAPVVVAPTFTWNGAYLGGQIG 52
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKD-------- 115
+ + G+ G+N L + V GI+ T
Sbjct: 53 YAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDGDVTYNDVSKNIDFLD 112
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + + G V +AGY+VD L Y GG + + ++A
Sbjct: 113 GNDAGSFENRLRWSGAVRARAGYAVDRFLPYIAGGVAFGSLRN-------RGEFEDASFS 165
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ +G G+DY ++ L YRY + +A V +
Sbjct: 166 QSKTLTGWTIGAGMDYAATDNVILRLEYRYTDYGNKDYGFDDAA-----VTNNFKTNDIR 220
Query: 236 LGINMHF 242
G+ F
Sbjct: 221 FGVAYKF 227
>gi|163844591|ref|YP_001622246.1| hypothetical protein BSUIS_B0425 [Brucella suis ATCC 23445]
gi|16611654|gb|AAL27287.1|AF366064_1 outer membrane protein Omp31 [Brucella suis ATCC 23445]
gi|163675314|gb|ABY39424.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 240
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 88/253 (34%), Gaps = 36/253 (14%)
Query: 11 FVVFLSIVV--PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-- 66
V+ SI ++A D+ + + W+G Y+G++
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGG 54
Query: 67 -----YETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ + D + G G++ G+N QL++ V G + +
Sbjct: 55 KFKHPFSSFDKEDIEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGS 114
Query: 119 F--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + K +G V + GY + + L++YG GG V D++
Sbjct: 115 ISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDA 171
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D + LG G +Y +N + +L + Y Y ++ D ++ K
Sbjct: 172 SALHTWPDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKV 227
Query: 230 NAHIASLGINMHF 242
N H +G+N F
Sbjct: 228 NFHTVRVGLNYKF 240
>gi|298292421|ref|YP_003694360.1| porin [Starkeya novella DSM 506]
gi|296928932|gb|ADH89741.1| porin [Starkeya novella DSM 506]
Length = 215
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 65/196 (33%), Gaps = 20/196 (10%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGI 106
+ W+G Y+G + + + + L G ++G N Q ++ V G
Sbjct: 39 AEPVFSWTGFYLGANAGYAWGSGQEGAETLGLDPDGFLG---GGQIGFNYQFDNNVVLGA 95
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+ + K +G V + GY+ ++L Y GG + +
Sbjct: 96 EADFQGSDIKDERLGFESKMDYFGTVRARLGYAFGNVLPYVTGGLAWGHTEVNDKLL--- 152
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D +G G++Y + ++ A Y Y+ + KS +
Sbjct: 153 ------GLTSDKTAVGWTVGGGVEYAFTNNWTVKAEYLYMDLGDDYYASIGDKSGLT--- 203
Query: 227 RKGNAHIASLGINMHF 242
A++ GIN F
Sbjct: 204 ----ANVVRAGINYKF 215
>gi|27377055|ref|NP_768584.1| hypothetical protein bll1944 [Bradyrhizobium japonicum USDA 110]
gi|27350198|dbj|BAC47209.1| bll1944 [Bradyrhizobium japonicum USDA 110]
Length = 825
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 70/232 (30%), Gaps = 22/232 (9%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEY--GIWSGNYVGLHISRLYETHPLADTI---NRKTYN 82
Y ++D N ++ + W+G Y+G I AD Y
Sbjct: 591 SYKSGELDTAQAKANGIDKEPPPVMPTNWAGVYLGGTIGAGKGRSHYADPFPTPVSGDYA 650
Query: 83 SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-------------FYRLKEKYFIY 129
L G ++G N Q +V G+ A T + +
Sbjct: 651 DLGGAMFGGQIGINYQTGSWVLGLEASGYWANVQGTNTCFGAFPSPQIAGFNCGSQIDAL 710
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G + + GY+ D L+Y GG D + + +G GL
Sbjct: 711 GALTGRVGYAFDRTLLYVKGGSAW----DRQTNQFNTGGISGTILTNGNTNWGWTVGGGL 766
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+Y + + S++ Y+Y V + V SLG+N
Sbjct: 767 EYALLPNWSMALEYKYYDFGKSPVFTTAGLGSVPLSPNSTTVQTVSLGVNYK 818
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/250 (16%), Positives = 76/250 (30%), Gaps = 29/250 (11%)
Query: 15 LSIVVPNHSLAVDLYLPR-KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
+ + LY P DL + + W+G YVG H+ + +
Sbjct: 60 ALLASNSICWMAGLYGPAHAADLPVKTAPPITAAPSTLWNWTGIYVGAHLGGAFGSSDWQ 119
Query: 74 DTIN---------RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS------- 117
+ G ++G N Q +V G+ +AA D
Sbjct: 120 TATGLQADFSNRGFPGSGNAEGLLGGGQIGVNYQFGTWVTGLEIAASAADVDGFAKCANR 179
Query: 118 -------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + G + + G + +LLIYG G A + +
Sbjct: 180 ADNRYGVISFTCDNRVTSLGTIAGRLGQTWGNLLIYGKAGAAWATDESDARTSHYIN--- 236
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
K G + G+GL+Y + ++S Y + N + ++ V +
Sbjct: 237 --KFNQSGTRWGWMGGLGLEYAFSPNLSAFVEYDHFDFGSKDSNYVDQFNNASTVGFRQR 294
Query: 231 AHIASLGINM 240
+ G+N
Sbjct: 295 FDMIKAGVNY 304
>gi|23500173|ref|NP_699613.1| outer membrane protein [Brucella suis 1330]
gi|225628865|ref|ZP_03786899.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|225686232|ref|YP_002734204.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457]
gi|254699679|ref|ZP_05161507.1| outer membrane protein Omp31 precursor [Brucella suis bv. 5 str.
513]
gi|254702817|ref|ZP_05164645.1| outer membrane protein Omp31 precursor [Brucella suis bv. 3 str.
686]
gi|254711636|ref|ZP_05173447.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis
B2/94]
gi|254712249|ref|ZP_05174060.1| outer membrane protein Omp31 precursor [Brucella ceti M644/93/1]
gi|254715320|ref|ZP_05177131.1| outer membrane protein Omp31 precursor [Brucella ceti M13/05/1]
gi|256015206|ref|YP_003105215.1| outer membrane protein, 31 kDa [Brucella microti CCM 4915]
gi|256029730|ref|ZP_05443344.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis
M292/94/1]
gi|256043319|ref|ZP_05446254.1| outer membrane protein Omp31 precursor [Brucella melitensis bv. 1
str. Rev.1]
gi|256059364|ref|ZP_05449566.1| outer membrane protein Omp31 precursor [Brucella neotomae 5K33]
gi|256157882|ref|ZP_05455800.1| outer membrane protein Omp31 precursor [Brucella ceti M490/95/1]
gi|256253156|ref|ZP_05458692.1| outer membrane protein Omp31 precursor [Brucella ceti B1/94]
gi|256262636|ref|ZP_05465168.1| outer membrane protein Omp31 [Brucella melitensis bv. 2 str. 63/9]
gi|260167181|ref|ZP_05753992.1| outer membrane protein, 31 kDa [Brucella sp. F5/99]
gi|260564527|ref|ZP_05835012.1| outer membrane protein 31 [Brucella melitensis bv. 1 str. 16M]
gi|261217050|ref|ZP_05931331.1| outer membrane immunogenic protein [Brucella ceti M13/05/1]
gi|261220262|ref|ZP_05934543.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|261319260|ref|ZP_05958457.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261319920|ref|ZP_05959117.1| outer-membrane immunogenic protein [Brucella ceti M644/93/1]
gi|261323324|ref|ZP_05962521.1| outer-membrane immunogenic protein [Brucella neotomae 5K33]
gi|261750144|ref|ZP_05993853.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261753417|ref|ZP_05997126.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|261756585|ref|ZP_06000294.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|265986741|ref|ZP_06099298.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
gi|265989742|ref|ZP_06102299.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265996391|ref|ZP_06108948.1| outer-membrane immunogenic protein [Brucella ceti M490/95/1]
gi|61229373|sp|P0A3U4|OM31_BRUME RecName: Full=31 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|61229374|sp|P0A3U5|OM31_BRUSU RecName: Full=31 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|16611645|gb|AAL27284.1|AF366061_1 outer membrane protein Omp31 [Brucella melitensis]
gi|16611651|gb|AAL27286.1|AF366063_1 outer membrane protein Omp31 [Brucella suis 1330]
gi|16611657|gb|AAL27288.1|AF366065_1 outer membrane protein Omp31 [Brucella suis]
gi|16611663|gb|AAL27290.1|AF366067_1 outer membrane protein Omp31 [Brucella suis]
gi|16611684|gb|AAL27297.1|AF366074_1 outer membrane protein Omp31 [Brucella neotomae]
gi|1457933|gb|AAB36693.1| outer membrane protein [Brucella melitensis]
gi|23463773|gb|AAN33618.1| outer membrane protein Omp31 [Brucella suis 1330]
gi|46251186|gb|AAS84564.1| Omp31 [Brucella ceti]
gi|46251188|gb|AAS84565.1| Omp31 [Brucella pinnipedialis]
gi|46251190|gb|AAS84566.1| Omp31 [Brucella ceti]
gi|46251192|gb|AAS84567.1| Omp31 [Brucella ceti]
gi|157310315|emb|CAN43870.1| outer membrane protein 31 [Brucella microti CCM 4915]
gi|157310317|emb|CAN43872.1| outer membrane protein 31 [Brucella microti]
gi|225616711|gb|EEH13759.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|225642337|gb|ACO02250.1| outer membrane protein Omp31 precursor [Brucella melitensis ATCC
23457]
gi|226433917|gb|ACO56077.1| Omp31 [Brucella melitensis]
gi|240265888|gb|ACS50328.1| Omp31 [Brucella melitensis]
gi|255997866|gb|ACU49553.1| outer membrane protein, 31 kDa [Brucella microti CCM 4915]
gi|260152170|gb|EEW87263.1| outer membrane protein 31 [Brucella melitensis bv. 1 str. 16M]
gi|260918846|gb|EEX85499.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|260922139|gb|EEX88707.1| outer membrane immunogenic protein [Brucella ceti M13/05/1]
gi|261292610|gb|EEX96106.1| outer-membrane immunogenic protein [Brucella ceti M644/93/1]
gi|261298483|gb|EEY01980.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261299304|gb|EEY02801.1| outer-membrane immunogenic protein [Brucella neotomae 5K33]
gi|261736569|gb|EEY24565.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|261739897|gb|EEY27823.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261743170|gb|EEY31096.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|262550688|gb|EEZ06849.1| outer-membrane immunogenic protein [Brucella ceti M490/95/1]
gi|263000411|gb|EEZ13101.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092421|gb|EEZ16674.1| outer membrane protein Omp31 [Brucella melitensis bv. 2 str. 63/9]
gi|264658938|gb|EEZ29199.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
Length = 240
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 88/253 (34%), Gaps = 36/253 (14%)
Query: 11 FVVFLSIVV--PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-- 66
V+ SI ++A D+ + + W+G Y+G++
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGG 54
Query: 67 -----YETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ + D + G G++ G+N QL++ V G + +
Sbjct: 55 KFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGS 114
Query: 119 F--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + K +G V + GY + + L++YG GG V D++
Sbjct: 115 ISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDA 171
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D + LG G +Y +N + +L + Y Y ++ D ++ K
Sbjct: 172 SALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKV 227
Query: 230 NAHIASLGINMHF 242
N H +G+N F
Sbjct: 228 NFHTVRVGLNYKF 240
>gi|256111680|ref|ZP_05452664.1| outer membrane protein Omp31 precursor [Brucella melitensis bv. 3
str. Ether]
gi|265993151|ref|ZP_06105708.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether]
gi|16611648|gb|AAL27285.1|AF366062_1 outer membrane protein Omp31 [Brucella melitensis]
gi|262764021|gb|EEZ10053.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether]
Length = 240
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 88/253 (34%), Gaps = 36/253 (14%)
Query: 11 FVVFLSIVV--PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-- 66
V+ SI ++A D+ + + W+G Y+G++
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGG 54
Query: 67 -----YETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ + D + G G++ G+N QL++ V G + +
Sbjct: 55 KFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGS 114
Query: 119 F--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + K +G V + GY + + L++YG GG V D++
Sbjct: 115 ISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDA 171
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D + LG G +Y +N + +L + Y Y ++ D ++ K
Sbjct: 172 SALHMWSDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKV 227
Query: 230 NAHIASLGINMHF 242
N H +G+N F
Sbjct: 228 NFHTVRVGLNYKF 240
>gi|27382580|ref|NP_774109.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27355752|dbj|BAC52734.1| bll7469 [Bradyrhizobium japonicum USDA 110]
Length = 208
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 76/223 (34%), Gaps = 32/223 (14%)
Query: 20 PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRK 79
+ A DL ++ N W+G Y+G +I + +
Sbjct: 18 TASAEAADLSYGQRAPYTVNQPLNA-------YSWAGPYLGGNIGYEWGSVD-------N 63
Query: 80 TYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS 139
+ GI+ G+N Q +VFG+ AA D TF K +G + + GY+
Sbjct: 64 NPSKPSGFVGGIQAGYNFQNGPWVFGVEGDIQAAGADDTFAPWKFSNPWFGTLRGRVGYA 123
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
++L YG G + + ES + +G G + + + S
Sbjct: 124 FSNVLFYGTAGLAFGELRAQTFGWTESH-----------TSAGWTIGAGAEVGLAPNWSA 172
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y YI S ++ + V A + G+N HF
Sbjct: 173 KLEYLYIDL-------STSQFAITGVSNGYTASVVRAGVNYHF 208
>gi|256682107|gb|ACV07678.1| OMP31 [Brucella melitensis]
Length = 240
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 45/253 (17%), Positives = 88/253 (34%), Gaps = 36/253 (14%)
Query: 11 FVVFLSIVV--PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-- 66
V+ SI ++A D+ + + W+G Y+G++
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGG 54
Query: 67 -----YETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ + D + G G++ G+N QL++ V G + +
Sbjct: 55 KFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGS 114
Query: 119 F--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + K +G V + GY + + +++YG GG V D++
Sbjct: 115 ISAGASGLEGKAETKVEWFGTVRARLGYTATERVMVYGTGGLAYGKVK---SAFNLGDDA 171
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D + LG G +Y +N + +L + Y Y ++ D ++ K
Sbjct: 172 SALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKV 227
Query: 230 NAHIASLGINMHF 242
N H +G+N F
Sbjct: 228 NFHTVRVGLNYKF 240
>gi|319898374|ref|YP_004158467.1| Pap31 [Bartonella clarridgeiae 73]
gi|319402338|emb|CBI75877.1| Pap31 [Bartonella clarridgeiae 73]
Length = 292
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 42/304 (13%), Positives = 83/304 (27%), Gaps = 83/304 (27%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L ++++ + A D+ +P++ W+G YVG I
Sbjct: 4 KCLMTASVVALMTAYAAQAADITVPQETGETIVVAPAFS--------WTGFYVGGQIGGF 55
Query: 67 YETHPLADTINRKT----------YNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKD 115
+ + ++ G G N+ L + + G++ +
Sbjct: 56 SSKTSFSSRDGDDSKKWLPLHKDLWSKPSGFTGGFYTGSNVDLGNGLILGVDTDVIWSGR 115
Query: 116 DS----------------------------------------TFYRLKEKYFIYGDVVLK 135
T Y K G ++
Sbjct: 116 KDEKTHEVTVELEDKDKNKHQEKSVSRSPVVFADGEEKEVEITKYGHTLKEKWAGATRIR 175
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG-----------------RFDG 178
G++ D ++ Y GG + DS V AK
Sbjct: 176 IGFAADRIMPYVAGGVAYTQLQDSFSTSVSRQKVSGAKAERADKEPSAEPNTVNTVDESK 235
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
LG G+D+ + ++ L A YRY ++N ++++ A+ +G+
Sbjct: 236 TMIGYTLGAGVDFAMTDNVVLRAEYRYSDFGKKKLHN-------DKLEVNYKANDFRVGV 288
Query: 239 NMHF 242
F
Sbjct: 289 AYKF 292
>gi|49475067|ref|YP_033108.1| hemin binding protein a [Bartonella henselae str. Houston-1]
gi|2150037|gb|AAC39274.1| Pap31 [Bartonella henselae phage 60457]
gi|49237872|emb|CAF27068.1| Hemin binding protein a [Bartonella henselae str. Houston-1]
Length = 279
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 81/292 (27%), Gaps = 70/292 (23%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+L ++++ + + A D+ +P + W+G Y+G +
Sbjct: 3 IKSLMTTSVIALISASAAQAADVIVPH--------EVAPTVISAPAFSWTGFYIGGQVGN 54
Query: 66 LYETHPLADT------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK---- 114
+ D ++ GI G N+ L + + G+ A
Sbjct: 55 FSSKVEITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDA 114
Query: 115 --------------------------------------DDSTFYRLKEKYFIYGDVVLKA 136
D L K G ++
Sbjct: 115 KTSSAEAIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRI 174
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLD 190
G+ + D ++ Y GG A V S KV +++ + LG G+D
Sbjct: 175 GFTAADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGVD 234
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + ++ L A YRY E + + +G+ F
Sbjct: 235 FAMTDNVLLRAEYRYSDFGKKKFE-------KEGSEFSYKTNDFRVGVAYKF 279
>gi|254706065|ref|ZP_05167893.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis
M163/99/10]
gi|261313502|ref|ZP_05952699.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M163/99/10]
gi|261302528|gb|EEY06025.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M163/99/10]
Length = 240
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 86/253 (33%), Gaps = 36/253 (14%)
Query: 11 FVVFLSIVV--PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
V+ SI ++A D+ + + W+G Y+G++
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGG 54
Query: 69 THPLADTINRKTYN---------SLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST 118
K N + G++ G+N QL++ V G + +
Sbjct: 55 KFKHPFFSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGS 114
Query: 119 F--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + K +G V + GY + + L++YG GG V D++
Sbjct: 115 ISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDA 171
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D + LG G +Y +N + +L + Y Y ++ D ++ K
Sbjct: 172 SALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKV 227
Query: 230 NAHIASLGINMHF 242
N H +G+N F
Sbjct: 228 NFHTVRVGLNYKF 240
>gi|148560659|ref|YP_001258682.1| outer-membrane protein Omp25 [Brucella ovis ATCC 25840]
gi|3914204|sp|Q45335|OM25_BRUO2 RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457929|gb|AAB06702.1| 25 kDa outer membrane protein [Brucella ovis]
gi|148371916|gb|ABQ61895.1| outer-membrane protein Omp25 [Brucella ovis ATCC 25840]
Length = 201
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 70/236 (29%), Gaps = 39/236 (16%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V + + A D + + W+G Y GL++
Sbjct: 5 KSLVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYG 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ + + K + G G N Q + V+G+ + + + L+ K
Sbjct: 58 WNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGNAGYSWAKKSKDGLEVKQ 113
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
G + + GY ++ ++ Y G G+ + + N G
Sbjct: 114 GFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAG 162
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+ + +I YRY + K + +GI F
Sbjct: 163 AGLEAKLTDNILGRVEYRYTQYGN-----------------KLDTQDIRVGIGYKF 201
>gi|260568272|ref|ZP_05838741.1| outer membrane protein Omp31 [Brucella suis bv. 4 str. 40]
gi|16611660|gb|AAL27289.1|AF366066_1 outer membrane protein Omp31 [Brucella suis]
gi|260154937|gb|EEW90018.1| outer membrane protein Omp31 [Brucella suis bv. 4 str. 40]
Length = 240
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 87/253 (34%), Gaps = 36/253 (14%)
Query: 11 FVVFLSIVV--PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-- 66
V+ SI ++A D+ + + W+G Y+G++
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGG 54
Query: 67 -----YETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ + D G G++ G+N QL++ V G + +
Sbjct: 55 KFKHPFSSFDKEDNEQVSGSLDATAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGS 114
Query: 119 F--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + K +G V + GY + + L++YG GG V D++
Sbjct: 115 ISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDA 171
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D + LG G +Y +N + +L + Y Y ++ D ++ K
Sbjct: 172 SALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKV 227
Query: 230 NAHIASLGINMHF 242
N H +G+N F
Sbjct: 228 NFHTVRVGLNYKF 240
>gi|27379782|ref|NP_771311.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27352935|dbj|BAC49936.1| bll4671 [Bradyrhizobium japonicum USDA 110]
Length = 282
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 47/251 (18%), Positives = 89/251 (35%), Gaps = 26/251 (10%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
G + LS+ P + A D+ P + A W+G Y+G H
Sbjct: 45 GTKLVLTAALLSLATP--AFAADIIAPAPVKAPVPA---------AIFTWTGFYIGAHGG 93
Query: 65 RLYETHPLADTINRK---TYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD----- 116
+ D + T + +G ++G N Q+ + V G+ +
Sbjct: 94 GAWSKWTGIDPTDPTAVWTSVTASGGIVGGQIGGNYQIGNVVVGLEGTGAWSSVTLNAGG 153
Query: 117 ----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ L K V + G + D +L+Y GG ++ + + +A
Sbjct: 154 PFGGGAGFTLSLKNDYIATVAGRFGVAFDRVLLYAKGGAAFTRDKYNANNGLAGALAGSA 213
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH-HIHSVNNSNAKSDVERVDRKGNA 231
G F + + + G G+++M + S+ A Y Y+ I ++ + K N
Sbjct: 214 SGSF--NRTGWLAGGGVEWMFMPNWSVRAEYNYMGFAAITEQPVTSGNLAATPANVKLNI 271
Query: 232 HIASLGINMHF 242
++G+N HF
Sbjct: 272 QTGTVGVNYHF 282
>gi|163867925|ref|YP_001609129.1| hemin binding protein D [Bartonella tribocorum CIP 105476]
gi|161017576|emb|CAK01134.1| hemin binding protein D [Bartonella tribocorum CIP 105476]
Length = 279
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 83/292 (28%), Gaps = 72/292 (24%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L S++ + A D+ + V W+G Y+G I
Sbjct: 4 KYLISTSIFSLISISVLQAADIVVSE---------QPVPVITVPSFSWTGFYLGGQIGNF 54
Query: 67 YETHP---------LADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD 116
+ + + ++ L G+ G NI +++ F+ GI+ +
Sbjct: 55 SGKTTANYLTKETGIWNPVEKEYLPKLSGFMGGVYAGSNIDIDNGFIIGIDTDVMWSNKK 114
Query: 117 ST------------------------------------FYRLKEKYFIYGDVVLKAGYSV 140
ST K G +K G++
Sbjct: 115 STKDILLPKKDETGEKKSLEKTSHTRDSHEDASTTLVEGVSHTLKQKWSGATRVKVGFAF 174
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG----------RFDGHGSSVVLGIGLD 190
+ ++ Y GG + + V+S +++ LG G+D
Sbjct: 175 ERMMPYVSGGIAYTQLQNILSAVVDSATVADSESRAIDSSDWLHDEKKTMIGYTLGGGVD 234
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + ++ + A YRY ++V+ + +G+ F
Sbjct: 235 FAMTDNVIVRAEYRYSDFGKKKF-------VQDKVEMSYKTNDFRVGVAYKF 279
>gi|39935611|ref|NP_947887.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39649464|emb|CAE27986.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 997
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 45/249 (18%), Positives = 76/249 (30%), Gaps = 31/249 (12%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A V + V + A DL + V W+G Y+G H+
Sbjct: 6 AWLSVWSVVAVACGSAHAADL-----------QNVAVPSAVPAATNWTGFYIGTHVGAAA 54
Query: 68 ETHP---------LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS- 117
+ GI+ G+N Q ++V GI + +
Sbjct: 55 SESAWNSIAGSGAGLAAGPFPGHGVSGNAIAGIQGGYNAQFGNYVLGIEGDASFGSINGL 114
Query: 118 -----TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + + + GY+ LL+YG G A V + +
Sbjct: 115 ARCLHGTFACTSRIDELWTLAARFGYAAGDLLVYGKAGAAWADVHRRMASGNFVNVLEA- 173
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
S +LG G++Y +S Y Y S+ ++ DV V AH
Sbjct: 174 ----SETRSGWLLGAGVEYAFLPGLSAKIEYNYADFGNRSLTMADQFGDVSDVSIGQTAH 229
Query: 233 IASLGINMH 241
+ +G+N
Sbjct: 230 LVKVGLNYR 238
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 67/215 (31%), Gaps = 23/215 (10%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTI---NRKTYNSLLPNGLGIELGHNIQLEDFV 103
Q W+G YVG + + AD L LG ++G N Q V
Sbjct: 779 QRIAPTNWTGLYVGASVGAGWGRTTYADPFPTPTTGDRADLGGALLGGQIGANYQFGHLV 838
Query: 104 FGINCHTTAAKDDST-------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
G+ A T + + G + GY++D L+Y GG
Sbjct: 839 AGVEASANWANIRGTDTCFGAYPNPVVAGFNCGSRIDAIGAFTARGGYAIDRTLLYVKGG 898
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
D + + +G GL+Y + S++ Y+Y
Sbjct: 899 AAWDRQQDQFNTVGVGGTTLASTS----TNWGWTVGGGLEYALAPSWSMALEYKYFDFGA 954
Query: 211 HSVNNSNAKSDVERVDRKGNA---HIASLGINMHF 242
+++ ++ V+ SLG+N F
Sbjct: 955 SPAFSTSVTPALDGVNLAPQTNKLQTVSLGVNYKF 989
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 26/209 (12%)
Query: 54 WSGNYVGLHISRLYETHP----------LADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
W+G Y+G+H + ++ + + G ++G N Q +V
Sbjct: 259 WTGIYLGVHAGGGFGSNDWDSATGALLAASTSGGFPGRGDSSGLFGGGQIGANYQFGRWV 318
Query: 104 FGINCHTTAAKDDS-----------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G+ AA + + G + + G + +LLIYG G
Sbjct: 319 AGVEASAAAADIGGYAKCATDVGTRRNFTCHNELSSLGTITGRLGQTWGNLLIYGKAGAA 378
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
A + ++ G V G GL+Y ++ ++S Y ++
Sbjct: 379 WA-----TGSSDAQRAGSASRFTESGTRWGWVTGTGLEYALSPNLSAFVEYNHVDFGTQD 433
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + V K + G+N
Sbjct: 434 TAYVDQFGNASEVGFKQKFDLVKAGLNYR 462
>gi|13471424|ref|NP_102990.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14022166|dbj|BAB48776.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 225
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 74/216 (34%), Gaps = 24/216 (11%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN-------SLLPNGLGI 91
AD VE W+G Y+G I + + N G+
Sbjct: 22 AADATVELPVASSYNWTGGYIGAQIGGGWSKVDQPWGFTEASPNIFDQDNADGSGVVGGL 81
Query: 92 ELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK-----EKYFIYGDVVLKAGYSVDSLLIY 146
G+N Q FVFG A D K V +AG++ D +LIY
Sbjct: 82 HAGYNWQSGSFVFGGEADINATGIDGDDGGSGGDINGFKARWVASVRARAGFAFDRVLIY 141
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G GG+ + + ++ + + +G G +Y + +I++ YRY
Sbjct: 142 GTGGYAYLNGKADTRDVGRQESHSASF-------NGWTIGAGAEYALTDNITVRGEYRYA 194
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V +N D+ H ++G++ F
Sbjct: 195 DFGSKTVVFNNYVEDISPA-----LHTVTIGVSYKF 225
>gi|260466903|ref|ZP_05813086.1| porin [Mesorhizobium opportunistum WSM2075]
gi|259029299|gb|EEW30592.1| porin [Mesorhizobium opportunistum WSM2075]
Length = 234
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 70/235 (29%), Gaps = 25/235 (10%)
Query: 26 VDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN--- 82
+++ + + AD N E WSG Y G+ L
Sbjct: 7 ATVFILGPVGMACAADIN-EVSPVAGYDWSGLYAGVDAGYAAGKSNLFIAGGGFGGGSDL 65
Query: 83 ----SLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDS----------TFYRLKEKYF 127
GI +G N Q+ +FV G + D LK +
Sbjct: 66 NVPLDPDGFVGGIHIGTNYQMANNFVIGAEADIAYSNADGLTPVDTGGGGVTTLLKSELK 125
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G L+AGY+ D L Y G A +++ D +G
Sbjct: 126 WQGSARLRAGYAFDRTLPYITAGVAAAKYEVTAISAGPGGEIPF----HDESHVGWTVGA 181
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+++ A YRY ++ + V VD H +G++ F
Sbjct: 182 GIEHAFTDRWIARAEYRYSDFGSQDLSLAAGLPTVTSVD--LQTHDVRVGLSYKF 234
>gi|312113978|ref|YP_004011574.1| outer-membrane immunogenic protein precursor; secreted protein
[Rhodomicrobium vannielii ATCC 17100]
gi|311219107|gb|ADP70475.1| putative outer-membrane immunogenic protein precursor; putative
secreted protein [Rhodomicrobium vannielii ATCC 17100]
Length = 243
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 84/252 (33%), Gaps = 26/252 (10%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
GY A+ VV L++ A D+ L + V + W+G Y G I
Sbjct: 2 GYKAILTVVTLTVAATGGVNATDIAKSAPGGLKDAPYVEVPW------NWAGAYYGATIG 55
Query: 65 RLYETHPLADTIN-----RKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ T N N LG +G+N Q+ ++ G +
Sbjct: 56 YGSGGSKASVTANANDEHGVDTNDPDGVLLGGTIGYNYQIAPTWLIGAEADFSWLGLQGD 115
Query: 119 FYR-------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + + + GY++ LIYG G+ + ++ +++S
Sbjct: 116 QGKAVFDGHYWTGGWDGLFTLRGRLGYTMGRTLIYGTAGYAALHTNETISGNNTNESSFG 175
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH--IHSVNNSNAKSDVERVDRKG 229
S V+G G+++ + +S+ A Y + + S + +
Sbjct: 176 -----TDWRSGWVVGGGVEHFLTERLSVKAEYLHAGFEDLTGATGFPGNYSATQNYKLES 230
Query: 230 NAHIASLGINMH 241
+ + +G+N
Sbjct: 231 DLDLVRIGLNYK 242
>gi|256060263|ref|ZP_05450438.1| outer membrane protein [Brucella neotomae 5K33]
gi|261324236|ref|ZP_05963433.1| Omp25c [Brucella neotomae 5K33]
gi|46251235|gb|AAS84588.1| Omp25c [Brucella neotomae]
gi|261300216|gb|EEY03713.1| Omp25c [Brucella neotomae 5K33]
Length = 228
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 42/248 (16%), Positives = 72/248 (29%), Gaps = 31/248 (12%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
AL F + +V + A D + W+G Y+G I
Sbjct: 2 KLKALLFASTVVLVAATGTNAADAVIE---------QEPAPVVVAPTFTWNGAYLGGQIG 52
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKD-------- 115
+ + G+ G+N L + V GI+ T
Sbjct: 53 YAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDGDVTYNDVSKNIDFLD 112
Query: 116 -DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ + + G V +AGY+VD L Y GG + + +
Sbjct: 113 ENNAAATFENRLRWSGAVRARAGYAVDRFLPYIAGGVAFGSLRN-------RGEFEGTGF 165
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ +G G+DY ++ L YRY + +A V +
Sbjct: 166 SQSKTLTGWTIGAGMDYAATDNVILRLEYRYTDYGNKDYGFDDAA-----VTNNFKTNDI 220
Query: 235 SLGINMHF 242
G+ F
Sbjct: 221 RFGVAYKF 228
>gi|254720536|ref|ZP_05182347.1| outer membrane protein Omp31 precursor [Brucella sp. 83/13]
gi|265985569|ref|ZP_06098304.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306838097|ref|ZP_07470954.1| outer membrane protein Omp31 [Brucella sp. NF 2653]
gi|264664161|gb|EEZ34422.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306406834|gb|EFM63056.1| outer membrane protein Omp31 [Brucella sp. NF 2653]
Length = 240
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 88/253 (34%), Gaps = 36/253 (14%)
Query: 11 FVVFLSIVV--PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-- 66
V+ SI ++A D+ + + W+G Y+G++
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGG 54
Query: 67 -----YETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDF-VFGINCHTTAAKDDST 118
+ T D + G G++ G+N QL++ V G + +
Sbjct: 55 KFKHPFSTFDTEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGGVLGAETDFQGSSVTGS 114
Query: 119 F--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + K +G V + GY + + L++YG GG V D++
Sbjct: 115 ISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDA 171
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D + LG G +Y +N + +L + Y Y ++ D ++ K
Sbjct: 172 SALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKV 227
Query: 230 NAHIASLGINMHF 242
N H +G+N F
Sbjct: 228 NFHTVRIGLNYKF 240
>gi|256254959|ref|ZP_05460495.1| porin [Brucella ceti B1/94]
gi|261222144|ref|ZP_05936425.1| Omp25b [Brucella ceti B1/94]
gi|265998108|ref|ZP_06110665.1| Omp25b [Brucella ceti M490/95/1]
gi|46251220|gb|AAS84581.1| Omp25b [Brucella ceti]
gi|46251222|gb|AAS84582.1| Omp25b [Brucella ceti]
gi|260920728|gb|EEX87381.1| Omp25b [Brucella ceti B1/94]
gi|262552576|gb|EEZ08566.1| Omp25b [Brucella ceti M490/95/1]
Length = 236
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 62/194 (31%), Gaps = 15/194 (7%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + L+D + G+ G+N +
Sbjct: 29 QEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSD-EDTSIRVKPDGFLGGLYAGYNFDMG 87
Query: 101 D-FVFGINCHTTAAKDDST----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+ FV G++ T D++ + K G V + G ++D + Y G
Sbjct: 88 NNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAG 147
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G V +S D ++ + G G+DY ++ + YRY +
Sbjct: 148 GVAFGNVKNSVSLT---DGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYG 204
Query: 210 IHSVNNSNAKSDVE 223
+ +
Sbjct: 205 HKDFSVVDGDLSSG 218
>gi|256159691|ref|ZP_05457444.1| porin [Brucella ceti M490/95/1]
Length = 240
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 62/194 (31%), Gaps = 15/194 (7%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + L+D + G+ G+N +
Sbjct: 33 QEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSD-EDTSIRVKPDGFLGGLYAGYNFDMG 91
Query: 101 D-FVFGINCHTTAAKDDST----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+ FV G++ T D++ + K G V + G ++D + Y G
Sbjct: 92 NNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAG 151
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G V +S D ++ + G G+DY ++ + YRY +
Sbjct: 152 GVAFGNVKNSVSLT---DGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYG 208
Query: 210 IHSVNNSNAKSDVE 223
+ +
Sbjct: 209 HKDFSVVDGDLSSG 222
>gi|182677110|ref|YP_001831256.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
gi|182632993|gb|ACB93767.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
Length = 244
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 75/242 (30%), Gaps = 19/242 (7%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+ + + +LA DL W+G Y+G I
Sbjct: 3 RTIIHSSIVIMASSVAALAADL------PNRAAPPTVPYLPPSPAFSWTGVYLGGQIGYQ 56
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR----- 121
+ + +S G +G N Q+ F+ G + + +
Sbjct: 57 FGRDSITAPGLFSVGHSPNGVVGGAHIGFNYQVSQFIVGFEGDVNGSSYSGSVFNPVFRT 116
Query: 122 -LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
L + + G + + G + D +L+Y GG A + +
Sbjct: 117 QLTSRIPVDGSLRGRIGAAWDRVLVYATGGAAFASIKHGYIGSS----LVPGSATLTNDR 172
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+G G++Y + + S+ YRY + +++ V R+ + N + G +
Sbjct: 173 VGWTVGGGVEYAMTDNWSVRVDYRYTDYGN--ISDFPGTITVPRIHHETN-NRVQAGFSY 229
Query: 241 HF 242
F
Sbjct: 230 KF 231
>gi|12620644|gb|AAG60920.1|AF322013_39 ID525 [Bradyrhizobium japonicum]
Length = 781
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 70/232 (30%), Gaps = 22/232 (9%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEY--GIWSGNYVGLHISRLYETHPLADTI---NRKTYN 82
Y ++D N ++ + W+G Y+G I AD Y
Sbjct: 547 SYKSGELDTAQAKANGIDKEPPPVMPTNWAGVYLGGTIGAGKGRSHYADPFPTPVSGDYA 606
Query: 83 SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-------------FYRLKEKYFIY 129
L G ++G N Q +V G+ A T + +
Sbjct: 607 DLGGAMFGGQIGINYQTGSWVLGLEASGYWANVQGTNTCFGAFPSPQIAGFNCGSQIDAL 666
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G + + GY+ D L+Y GG D + + +G GL
Sbjct: 667 GALTGRVGYAFDRTLLYVKGGSAW----DRQTNQFNTGGISGTILTNGNTNWGWTVGGGL 722
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+Y + + S++ Y+Y V + V SLG+N
Sbjct: 723 EYALLPNWSMALEYKYYDFGKSPVFTTAGLGSVPLSPNSTTVQTVSLGVNYK 774
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 41/250 (16%), Positives = 76/250 (30%), Gaps = 29/250 (11%)
Query: 15 LSIVVPNHSLAVDLYLPR-KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
+ + LY P DL + + W+G YVG H+ + +
Sbjct: 16 ALLASNSICWMAGLYGPAHAADLPVKTAPPITAAPSTLWNWTGIYVGAHLGGAFGSSDWQ 75
Query: 74 DTIN---------RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS------- 117
+ G ++G N Q +V G+ +AA D
Sbjct: 76 TATGLQADFSNRGFPGSGNAEGLLGGGQIGVNYQFGTWVTGLEIAASAADVDGFAKCANR 135
Query: 118 -------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + G + + G + +LLIYG G A + +
Sbjct: 136 ADNRYGVISFTCDNRVTSLGTIAGRLGQTWGNLLIYGKAGAAWATDESDARTSHYIN--- 192
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
K G + G+GL+Y + ++S Y + N + ++ V +
Sbjct: 193 --KFNQSGTRWGWMGGLGLEYAFSPNLSAFVEYDHFDFGSKDSNYVDQFNNASTVGFRQR 250
Query: 231 AHIASLGINM 240
+ G+N
Sbjct: 251 FDMIKAGVNY 260
>gi|237814592|ref|ZP_04593590.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|237789429|gb|EEP63639.1| Porin subfamily protein [Brucella abortus str. 2308 A]
Length = 239
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 62/212 (29%), Gaps = 22/212 (10%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + + G+ G+N L
Sbjct: 40 QEPAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLG 99
Query: 101 D-FVFGINCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ V GI+ T ++ + + G V +AGY+VD L Y GG
Sbjct: 100 NSVVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAVDRFLPYIAGG 159
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ + + + +G G+DY ++ L YRY +
Sbjct: 160 VAFGSLRN-------RGEFEGTGFSQSKTLTGWTIGAGMDYAATDNVILRLEYRYTDYGN 212
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+A V + G+ F
Sbjct: 213 KDYGFDDAA-----VTNNFKTNDIRFGVAYKF 239
>gi|240849915|ref|YP_002971304.1| hemin binding protein C [Bartonella grahamii as4aup]
gi|240267038|gb|ACS50626.1| hemin binding protein C [Bartonella grahamii as4aup]
Length = 277
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 78/287 (27%), Gaps = 64/287 (22%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L + V + + A D+ +P W+G Y+G +
Sbjct: 4 KWLITASAFAFVSVSAAQAADVIVP------PSPTPVAPVIVAPTFSWTGFYLGGQLGGF 57
Query: 67 YETHPLADTINRKT-------YNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ N K L G+ G N+ L + + G++ + D T
Sbjct: 58 SGKTKMDILSNGKKIPAPDDLLPKLSGFMGGLYAGSNVDLGNGLILGVDTDIMWSNKDDT 117
Query: 119 FYR--------------------------------------LKEKYFIYGDVVLKAGYSV 140
K G ++ G++
Sbjct: 118 KTGNTYVILPDHINYIKKILTESGINIGKDALEAGAKRTHSFTFKEKWAGATRVRIGFAA 177
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNS-----KNAKGRFDGHGSSVVLGIGLDYMVNY 195
+ ++ Y GG + D++ + +S LG G+D +
Sbjct: 178 ERIMPYVAGGIAYTQLQDTASISITGKDSDKVIASGTLSDETKTLVGYTLGAGVDLAMTN 237
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + A YRY +N ++ + + +G+ F
Sbjct: 238 NVIVRAEYRYSDFGKKKFSN-------DKYETSYKTNDFRVGVAYKF 277
>gi|192291194|ref|YP_001991799.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris TIE-1]
gi|192284943|gb|ACF01324.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris TIE-1]
Length = 997
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 45/249 (18%), Positives = 76/249 (30%), Gaps = 31/249 (12%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A V + V + A DL + V W+G Y+G H+
Sbjct: 6 AWLSVWSVVAVACGSAHAADL-----------QNGAVPSAVPAATNWTGFYIGTHVGAAA 54
Query: 68 ETHP---------LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS- 117
+ GI+ G+N Q ++V GI + +
Sbjct: 55 SDSAWNSIAGSGAGLAAGPFPGHGVSGNAIAGIQGGYNAQFGNYVLGIEGDASFGSINGL 114
Query: 118 -----TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + + + GY+ LL+YG G A V + +
Sbjct: 115 ARCLHGTFACTSRIDELWTLAARFGYAAGDLLVYGKAGAAWADVHRRMASGNFVNVLEA- 173
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
S +LG G++Y +S Y Y S+ ++ DV V AH
Sbjct: 174 ----SETRSGWLLGAGVEYAFLPGLSAKIEYNYADFGSRSLTMADQFGDVSDVSIGQTAH 229
Query: 233 IASLGINMH 241
+ +G+N
Sbjct: 230 LVKVGLNYR 238
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 66/215 (30%), Gaps = 23/215 (10%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTI---NRKTYNSLLPNGLGIELGHNIQLEDFV 103
W+G YVG + + AD L LG ++G N Q V
Sbjct: 779 PRIAPTNWTGLYVGASVGAGWGRTTYADPFPTPTTGDRADLGGALLGGQIGANYQFGHLV 838
Query: 104 FGINCHTTAAKDDST-------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
G+ A T + + G + GY++D L+Y GG
Sbjct: 839 AGVEASANWANIRGTDTCFGAYPNPVVAGFNCGSRIDAIGAFTARGGYAIDRTLLYVKGG 898
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
D +G GL+Y + S++ Y+Y
Sbjct: 899 AAWDRQQDQFNTV----GVGGTTLANTSTNWGWTVGGGLEYALAPSWSMALEYKYFDFGA 954
Query: 211 HSVNNSNAKSDVERVD---RKGNAHIASLGINMHF 242
+++ ++ V+ + ASLG+N F
Sbjct: 955 SPAFSTSVTPALDGVNLAPQSNKLQTASLGVNYKF 989
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 26/209 (12%)
Query: 54 WSGNYVGLHISRLYETHP----------LADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
W+G Y+G+H + ++ + + G ++G N Q +V
Sbjct: 259 WTGIYLGVHAGGGFGSNDWDSATGALLAASTSGGFPGRGDSSGLFGGGQIGANYQFGRWV 318
Query: 104 FGINCHTTAAKDDS-----------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G+ AA + + G + + G + +LLIYG G
Sbjct: 319 AGVEASAAAADIGGYAKCATDVGTRRNFTCHNELSSLGTITGRLGQTWGNLLIYGKAGAA 378
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
A + ++ G V G GL+Y ++ ++S Y ++
Sbjct: 379 WA-----TGSSDAQRAGSASRFTESGTRWGWVTGTGLEYALSPNLSAFVEYNHVDFGTQD 433
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + V K + G+N
Sbjct: 434 TAYVDQFGNASEVGFKQKFDLVKAGLNYR 462
>gi|225626662|ref|ZP_03784701.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|225618319|gb|EEH15362.1| Porin subfamily protein [Brucella ceti str. Cudo]
Length = 239
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 62/212 (29%), Gaps = 22/212 (10%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + + G+ G+N L
Sbjct: 40 QEPAPVVVALTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLG 99
Query: 101 D-FVFGINCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ V GI+ T ++ + + G V +AGY+VD L Y GG
Sbjct: 100 NSVVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAVDRFLPYIAGG 159
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ + + + +G G+DY ++ L YRY +
Sbjct: 160 VAFGSLRN-------RGEFEGTGFSQSKTLTGWTIGAGMDYAATDNVILRLEYRYTDYGN 212
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+A V + G+ F
Sbjct: 213 KDYGFDDAA-----VTNNFKTNDIRFGVAYKF 239
>gi|7514148|pir||JC6528 31K major protein, Pap31 - Bartonella henselae phage
Length = 281
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 41/292 (14%), Positives = 83/292 (28%), Gaps = 68/292 (23%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+L ++++ + + A D+ +P ++ + + +G Y+G +
Sbjct: 3 IKSLMTTSVIALISASAAQAADVIVPHEVAPTVISAPAFSWTG------TGFYIGGQVGN 56
Query: 66 LYETHPLADT------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK---- 114
+ D ++ GI G N+ L + + G+ A
Sbjct: 57 FSSKVEITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDA 116
Query: 115 --------------------------------------DDSTFYRLKEKYFIYGDVVLKA 136
D L K G ++
Sbjct: 117 KTSSAEAIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRI 176
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLD 190
G+ + D ++ Y GG A V S KV +++ + LG G+D
Sbjct: 177 GFTAADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGVD 236
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + ++ L A YRY E + + +G+ F
Sbjct: 237 FAMTDNVLLRAEYRYSDFGKKKFE-------KEGSEFSYKTNDFRVGVAYKF 281
>gi|326410582|gb|ADZ67646.1| outer membrane protein Omp31 [Brucella melitensis M28]
Length = 229
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 84/241 (34%), Gaps = 34/241 (14%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-------YETHPLA 73
++A D+ + + W+G Y+G++ + +
Sbjct: 4 TSAMAADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGGKFKHPFSSFDKE 55
Query: 74 DTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDSTF--------YRL 122
D + G G++ G+N QL++ V G + + +
Sbjct: 56 DNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKA 115
Query: 123 KEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+ K +G V + GY + + L++YG GG V D++ D +
Sbjct: 116 ETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDASALHTWSDKTKA 172
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
LG G +Y +N + +L + Y Y ++ D ++ K N H +G+N
Sbjct: 173 GWTLGAGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKVNFHTVRVGLNYK 228
Query: 242 F 242
F
Sbjct: 229 F 229
>gi|90422419|ref|YP_530789.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisB18]
gi|90104433|gb|ABD86470.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisB18]
Length = 207
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 74/222 (33%), Gaps = 31/222 (13%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKT 80
+ + A DL YQ W+G Y+G ++ + + T
Sbjct: 17 SSAQAADL------PYGGSRAPYTVYQPLNAHSWAGPYLGGNLGYAWGDVHNSAT----- 65
Query: 81 YNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV 140
G++ G+N Q FV+G+ D TF K +G V +AGYS
Sbjct: 66 --EPSGVAGGVQAGYNWQSGQFVYGLEGDIAITGADDTFASWKFSNPWFGTVRGRAGYSF 123
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D+LL+Y GG + + +G G ++ +N + S
Sbjct: 124 DNLLVYATGGLAFGELKGERFG-----------QSNSSTNAGWTIGAGAEFGLNQNWSAK 172
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y Y+ + + V I +G+N HF
Sbjct: 173 VEYLYVDLGGSNF-------SITGVQNSYQFGILRVGVNYHF 207
>gi|319782584|ref|YP_004142060.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317168472|gb|ADV12010.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 242
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 44/254 (17%), Positives = 68/254 (26%), Gaps = 40/254 (15%)
Query: 9 LFFVVFLSIVVPNH-SLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
+ + I+ P + A D+ WSG Y G+ I
Sbjct: 9 ILLLATAIILAPAGMACAADIAETSPT---------------SAYDWSGLYAGVDIGYAA 53
Query: 68 ETHPLADTINRKTYN-------SLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTF 119
L G+ +G N Q+E+ FV G D
Sbjct: 54 GKSNLFIAGGGLGGATDLNVGVDPNGFIGGVHIGANYQMENSFVIGAEADIAYGNIDGLT 113
Query: 120 YR-----------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
LK + G L+AGY+ D L Y G A L V +
Sbjct: 114 ALDAGGGGGVTTLLKSELKWSGSARLRAGYAFDRTLPYITAGVAAAKYE---LIAVSAGG 170
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+G G+++ A YRY ++ + VD
Sbjct: 171 PAAEVTLHSDSHVGWTVGAGIEHAFTDRWIARAEYRYSDFGSQDLSVAAGLPTETHVD-- 228
Query: 229 GNAHIASLGINMHF 242
+G++ F
Sbjct: 229 LQTQDIRVGLSYKF 242
>gi|90424594|ref|YP_532964.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18]
gi|90106608|gb|ABD88645.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18]
Length = 236
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 74/242 (30%), Gaps = 27/242 (11%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L +V+ + A DL P A E W+G Y+G H+ +
Sbjct: 4 LLLGTAALMVLAAPAFAADL--PAPTYTKAPAYTAPEV----VYNWTGFYIGGHVGGAFA 57
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYR------ 121
+ + G+++G + Q ++V G+ + +
Sbjct: 58 -------GDNNISGNDGQFLGGVQIGADYQFTRNWVVGLEAQYSWLPSNDNGGLAFPGGS 110
Query: 122 -LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ + G V + GY+ L+Y GG+ H
Sbjct: 111 LVTQDNRGLGSVTGRLGYTWGPALLYAKGGYAFRDSSLDLSNT----GVGVPFTTSGNHR 166
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+G GL+YM + S Y+Y + + DV + + H G+N
Sbjct: 167 DGYTVGAGLEYMFAPNWSAKVEYQYYDFGNTTF--TGGPPDVLGASVRNDEHTVKAGLNY 224
Query: 241 HF 242
F
Sbjct: 225 RF 226
>gi|110634908|ref|YP_675116.1| hypothetical protein Meso_2567 [Mesorhizobium sp. BNC1]
gi|110285892|gb|ABG63951.1| outer membrane protein, hypothetical [Chelativorans sp. BNC1]
Length = 234
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 83/248 (33%), Gaps = 27/248 (10%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
++ + F+ + + A D + R V + WSG Y+G+
Sbjct: 2 RSILSLAFIGLFGTSAGFAADAIIQR---DDPVPVAPVVAAPAKSYDWSGIYLGVDGGYK 58
Query: 67 YETHPLADTINRKTYNSLLPNGL-------GIELGHNIQLEDFVFGINCHTT--AAKDDS 117
+ + D + + + G+ LG+N Q++++V G D
Sbjct: 59 WNSLKF-DPNSVAKKAGIKGDAFKMNSTFGGVYLGYNYQIDNWVIGAEGDAQLYFGGKDK 117
Query: 118 TFYRLKEK---YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ +G ++ GY++D L Y GG + S S
Sbjct: 118 AAASGNGRFAASRGFGSARVRLGYAMDRFLPYVTGGAAFENLEIS------SKKDGKVVA 171
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
R + LG GLDY + Y+++ S + D+ D ++H
Sbjct: 172 RDNKTRVGYTLGAGLDYAITEKWIGKVEYQFMDFGKKSYD-----LDIGSADLSSHSHTM 226
Query: 235 SLGINMHF 242
+G++ F
Sbjct: 227 RVGLSYKF 234
>gi|306840766|ref|ZP_07473513.1| outer membrane protein Omp31 [Brucella sp. BO2]
gi|306289161|gb|EFM60410.1| outer membrane protein Omp31 [Brucella sp. BO2]
Length = 223
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 79/237 (33%), Gaps = 34/237 (14%)
Query: 25 AVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN-- 82
A D+ + + W+G Y+G++ + N
Sbjct: 2 AADVVVSEPSAPTTAPVD--------TFSWTGGYIGINAGYAGGKFKHPFSAFDTDDNER 53
Query: 83 -------SLLPNGLGIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKY 126
+ G++ G+N QL++ V G A + + K
Sbjct: 54 VSGSLNITSGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISADAGGLEGKAETKV 113
Query: 127 FIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
+G V + GY + + L++YG GG V D+ D + L
Sbjct: 114 EWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDVSALHTWSDKTKAGWTL 170
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G G +Y +N + +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 171 GAGAEYAINNNWTLKSEYLYTDLGKRNLIDVDDSF----LESKVNFHTVRVGLNYKF 223
>gi|306842592|ref|ZP_07475241.1| outer membrane protein [Brucella sp. BO2]
gi|306287237|gb|EFM58725.1| outer membrane protein [Brucella sp. BO2]
Length = 228
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 61/212 (28%), Gaps = 22/212 (10%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + + G+ G+N L
Sbjct: 29 QEPAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLG 88
Query: 101 D-FVFGINCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ V GI+ T + + + G V +AGY+VD L Y GG
Sbjct: 89 NSVVLGIDGDVTYNDVSKKIDFLDENDAAATFENRLRWSGAVRARAGYAVDRFLPYIAGG 148
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ + + + +G G+DY ++ L YRY +
Sbjct: 149 VAFGSLRN-------RGEFEGTGFSQSKTLTGWTIGAGMDYAATDNVILRLEYRYTDYGD 201
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+A V + G+ F
Sbjct: 202 KDYGFDDAA-----VTNNFKTNDIRFGVAYKF 228
>gi|159185080|ref|NP_355120.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|159140353|gb|AAK87905.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 209
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 73/228 (32%), Gaps = 22/228 (9%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
+++V + ++ V + WSG Y+G+ + +
Sbjct: 3 TLIVTSLLALSASTAMAADAVYETPAPPVAQETLPVFTWSGPYLGIQGGAGWANGDFS-A 61
Query: 76 INRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
+ LG G+N Q + + V GI +D+ + +K G V
Sbjct: 62 GGPVVSDDFNGGILGAFAGYNYQFDNNMVLGIEGDVDYNWNDNDYSGIKVGTDWQGSVRG 121
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ GY+ D LIY G + G + +G G+DY
Sbjct: 122 RVGYAFDHALIYATAG-----------WTATRGFIETPVGDDKATFNGYTVGAGVDYAFT 170
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ YRY + D+ ++ + H +G+ + F
Sbjct: 171 DNVFGRLEYRYNDYGDK---------DIFGINTDFDQHTVKVGLGVKF 209
>gi|306841014|ref|ZP_07473744.1| outer membrane protein Omp31 [Brucella sp. BO2]
gi|306846349|ref|ZP_07478900.1| outer membrane protein Omp31 [Brucella sp. BO1]
gi|306273192|gb|EFM55083.1| outer membrane protein Omp31 [Brucella sp. BO1]
gi|306288964|gb|EFM60252.1| outer membrane protein Omp31 [Brucella sp. BO2]
Length = 239
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 43/257 (16%), Positives = 85/257 (33%), Gaps = 47/257 (18%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET- 69
+ +++ + ++A D + + W+G Y+G++
Sbjct: 5 LLASFAMLFASSAMAADAIVAEPAP-----------VAVDTFSWTGGYIGINAGYAGGKF 53
Query: 70 --------------HPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK 114
+ ++ + G++ G+N QL++ FV G +
Sbjct: 54 KHPFSVAGLPTAGMNEEGGALSGSLDVTSSGFVGGVQAGYNWQLDNGFVLGAEADFQGST 113
Query: 115 D--------DSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVE 165
D + K +G V + GY + + LL+YG GG V S
Sbjct: 114 VKGDISAHLDDLDGNAETKVEWFGTVRARLGYTATERLLVYGTGGLAYGKVKSSL----- 168
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
++ + +G G +Y +N + +L + Y Y H + N N S +
Sbjct: 169 --GIEDWGVSSSKTKAGWTVGAGAEYAINNNWTLKSEYLYTDLGKHDLINVNELS----L 222
Query: 226 DRKGNAHIASLGINMHF 242
H +G+N F
Sbjct: 223 KNDVKFHTVRVGLNYKF 239
>gi|163867545|ref|YP_001608744.1| hemin binding protein C [Bartonella tribocorum CIP 105476]
gi|161017191|emb|CAK00749.1| hemin binding protein C [Bartonella tribocorum CIP 105476]
Length = 277
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 77/287 (26%), Gaps = 64/287 (22%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L + V + + A D+ +P W+G Y G I
Sbjct: 4 KWLITASAFAFVSVSAAQAADVIVP------PSPTPVAPVIVAPTFSWTGFYFGGQIGGF 57
Query: 67 YETHPLAD-------TINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ ++ L G+ G NI L + + G++ + D T
Sbjct: 58 SGKTKMDILAKGQKIPVSDDYLPKLSGFMGGLYAGSNIDLGNGLILGVDTDIMWSNKDDT 117
Query: 119 FYR--------------------------------------LKEKYFIYGDVVLKAGYSV 140
K G ++ G++
Sbjct: 118 KTGKTYVIAPGHINYINKILKDAAINIGKDALEAGAKRTHSFTFKEKWAGATRVRIGFAA 177
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNS-----KNAKGRFDGHGSSVVLGIGLDYMVNY 195
+ ++ Y GG + D++ + +S LG G+D +
Sbjct: 178 ERIMPYVAGGIAYTQLQDTASISITEKDSDKVIASGTLSDETKTLVGYTLGAGVDLAMTN 237
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+I + A YRY +N ++ + + +G+ F
Sbjct: 238 NIIVRAEYRYSDFGKKKFSN-------DKYETSYKTNDFRVGVAYKF 277
>gi|298292293|ref|YP_003694232.1| porin [Starkeya novella DSM 506]
gi|296928804|gb|ADH89613.1| porin [Starkeya novella DSM 506]
Length = 257
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 64/222 (28%), Gaps = 39/222 (17%)
Query: 54 WSGNYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLED 101
W+G Y+G + + D + G+++G+N Q ++
Sbjct: 42 WTGLYLGGNAGYGWGEGSAPWLGYLDYYYGALDQYGYSGGSDPQGWFGGVQVGYNYQFDN 101
Query: 102 -FVFGINCHTTAAKD----------------DSTFYRLKEKYFIYGDVVLKAGYSVDSLL 144
V GI + D ++ K +G V + GY+VD LL
Sbjct: 102 NVVLGIEADAQFGELKDSLSYYGTDLFSGVPDLDLGGIETKIEAFGTVRARLGYAVDRLL 161
Query: 145 IYGMGGFGGAYVI----DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
Y GG V + D +G G++Y + ++
Sbjct: 162 PYVTGGLAWGNVKMSERWDTYMGGVFQPGLTGTASADETLWGWTVGGGVEYAFTDNWTVK 221
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A Y Y + + LGIN F
Sbjct: 222 AEYLYADLGDINWDGD------AGTKVDVKLQTVKLGINYKF 257
>gi|294851523|ref|ZP_06792196.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|294820112|gb|EFG37111.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 237
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 61/212 (28%), Gaps = 22/212 (10%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + + G+ G+N L
Sbjct: 38 QEPAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLG 97
Query: 101 D-FVFGINCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ V GI+ T ++ + G V +AGY+VD L Y GG
Sbjct: 98 NSVVLGIDGDVTYNDVSKNIDFLDENNAAATFENHLRWSGAVRARAGYAVDRFLPYIAGG 157
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ + + + +G G+DY ++ L YRY +
Sbjct: 158 VAFGSLRN-------RGEFEGTGFSQSKTLTGWTIGAGMDYAATDNVILRLEYRYTDYGN 210
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+A V + G+ F
Sbjct: 211 KDYGFDDAA-----VTNNFKTNDIRFGVAYKF 237
>gi|148559219|ref|YP_001258157.1| putative outer membrane protein [Brucella ovis ATCC 25840]
gi|46251231|gb|AAS84586.1| Omp25c [Brucella ovis]
gi|148370476|gb|ABQ60455.1| putative outer membrane protein [Brucella ovis ATCC 25840]
Length = 228
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 63/212 (29%), Gaps = 22/212 (10%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + + G+ G+N L
Sbjct: 29 QEPAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDPTDLGDIKPDGFLGGLYAGYNFDLG 88
Query: 101 D-FVFGINCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ V GI+ T ++ + + G V +AGY+VD L Y GG
Sbjct: 89 NSVVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAVDRFLPYIAGG 148
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ + + A + +G G+DY ++ L YRY +
Sbjct: 149 VAFGSLRN-------RGEFEGAGFSQSKTLTGWTIGAGMDYAATDNVILRLEYRYTDYGN 201
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+A V + G+ F
Sbjct: 202 KDYGFDDAA-----VTNNFKTNDIRFGVAYKF 228
>gi|229620416|gb|ACQ84164.1| Omp31 [Brucella melitensis]
Length = 240
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 88/253 (34%), Gaps = 36/253 (14%)
Query: 11 FVVFLSIVV--PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-- 66
V+ SI ++A D+ + + W+G Y+G++
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGG 54
Query: 67 -----YETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ + D + G G++ G+N QL++ V G + +
Sbjct: 55 KFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAGTDFQGSSVTGS 114
Query: 119 F--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + K +G V + GY + + L++YG GG V D++
Sbjct: 115 ISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDA 171
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D + LG G +Y +N + +L + Y Y ++ D ++ K
Sbjct: 172 SALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKV 227
Query: 230 NAHIASLGINMHF 242
N H +G+N F
Sbjct: 228 NFHTVRVGLNYKF 240
>gi|261218682|ref|ZP_05932963.1| outer membrane protein 25b [Brucella ceti M13/05/1]
gi|261321820|ref|ZP_05961017.1| outer membrane protein 25b [Brucella ceti M644/93/1]
gi|260923771|gb|EEX90339.1| outer membrane protein 25b [Brucella ceti M13/05/1]
gi|261294510|gb|EEX98006.1| outer membrane protein 25b [Brucella ceti M644/93/1]
Length = 229
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 63/188 (33%), Gaps = 16/188 (8%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST------ 118
+ L+D + G+ G+N + + FV G++ T D++
Sbjct: 47 GWGRSTLSD-EDTSIRVKPDGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTDP 105
Query: 119 ----FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ K G V + G ++D + Y GG V +S D ++
Sbjct: 106 DLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNVKNSVSLT---DGIESIGV 162
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ G G+DY ++ + YRY + + + VE K H
Sbjct: 163 SQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVE-ARNKFKTHDI 221
Query: 235 SLGINMHF 242
LG+ F
Sbjct: 222 RLGVAYKF 229
>gi|49473903|ref|YP_031945.1| hemin binding protein c [Bartonella quintana str. Toulouse]
gi|21689903|gb|AAM68128.1| hemin-binding protein C [Bartonella quintana]
gi|49239406|emb|CAF25744.1| Hemin binding protein c [Bartonella quintana str. Toulouse]
Length = 277
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 77/287 (26%), Gaps = 64/287 (22%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L + V + A D+ +P + W+G Y+G I
Sbjct: 4 KWLITASAFAFVSASTVQAADVVVP------PRSTPIAPVIVAPTFSWTGFYIGGQIGGF 57
Query: 67 YETHPLADTINRKTYN-------SLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ N KT+ L GI +G N+ L + + G++ + T
Sbjct: 58 SSKTKMNILANGKTFPVKDDLLPKLSGFMGGIYVGSNVDLGNGLILGVDTDIIWSDKKYT 117
Query: 119 FYR--------------------------------------LKEKYFIYGDVVLKAGYSV 140
K G ++ G++
Sbjct: 118 KTGKVYEITEQHIPYIKKMLTEAGIAISNNDLKPGAKRVHSFTFKEKWAGATRVRIGFAA 177
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSK-----NAKGRFDGHGSSVVLGIGLDYMVNY 195
+ ++ Y GG + D +++ +S LG G+D +
Sbjct: 178 ERIMPYVAGGIAYTQLQDIGSISIKNKDSSKVIASGNLSDETKTFVGYTLGAGVDLAMTN 237
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + A YRY ++ + +G+ F
Sbjct: 238 NVVVRAEYRYSDFGKKKFTKGQ-------LETSYKTNDFRVGVAYKF 277
>gi|312114546|ref|YP_004012142.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
gi|311219675|gb|ADP71043.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
Length = 250
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 96/246 (39%), Gaps = 30/246 (12%)
Query: 14 FLSIVVPNHSLAVDLY-LPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPL 72
+I + + A DLY P L + W+G Y G++ +
Sbjct: 10 VSAIALTVSANAADLYRAPAGGGLKDAPYVAT---------WTGFYAGVNGGYAWSQSSD 60
Query: 73 ADTINRKTYN----SLLPNGLGIELGHNIQ---LEDFVFGINCHTTAAKD-----DSTFY 120
Y S G ++G+N+Q + V GI + DS Y
Sbjct: 61 QLAYVDPNYPFYGLSPEGGFGGGQIGYNLQGFVHPNLVLGIEADIQGSDISDSGVDSATY 120
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ K +G V + GY++DS L+Y GGF + + ++ + + +FDG+
Sbjct: 121 KYSSKVDWFGTVRGRLGYAIDSALVYATGGFAYGGIKNDY----DARHLGAGEFKFDGNA 176
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD----RKGNAHIASL 236
+ V+G G++Y + SL A Y+YI ++ +++ ++ H +
Sbjct: 177 TGYVVGGGVEYKLAPAWSLKAEYQYINLGKNNPVDTSTGQHYTDLEGTKLEDDAFHTVRV 236
Query: 237 GINMHF 242
G+N HF
Sbjct: 237 GLNYHF 242
>gi|209883207|ref|YP_002287064.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
gi|209871403|gb|ACI91199.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
Length = 644
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 70/227 (30%), Gaps = 24/227 (10%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET--HPLADTINRKTYNSLL 85
+ AD ++ W+G YVG HI + T + D T++
Sbjct: 3 MTAAFPALSAQAADLPLKAPAIPAYDWNGAYVGAHIGYSFGTAHGEVIDGSAFPTHHHFG 62
Query: 86 PNGLGIELGHNIQLED-FVFGINCHTTA----------AKDDSTFYRLKEKYFIYGDVVL 134
G G+N+ L + G + A + L E+ G +
Sbjct: 63 GAMAGFHAGYNVLLPSRILLGAEADISFPSYFESNALIATTPTAGNMLTERLDYAGSLRA 122
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ GY+ L+Y GGF A + D + G G++Y +
Sbjct: 123 RLGYATPQWLLYVTGGFAFAGERFENELAPFKDKRIAY-------RTGWTAGAGIEYAIA 175
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
S Y Y SV ++ +D H LG++
Sbjct: 176 PLWSARLEYLYSDFGRTSVVMNSGLQATSALDM----HSVRLGLSRK 218
>gi|39935882|ref|NP_948158.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39649736|emb|CAE28257.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 288
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 67/220 (30%), Gaps = 22/220 (10%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLY--------ETHPLADTINRKTYNSLLPNGLGI 91
WSG YVG + T + + G
Sbjct: 64 PYTKAPPIIAAAYDWSGFYVGANGGWGTSRNCWDYLGTTATPAVALGEGCHDASGGTAGG 123
Query: 92 ELGHNIQLEDFVFGINCHTTAAKDDSTFYRL---------KEKYFIYGDVVLKAGYSVDS 142
++G+N Q+ +VFG+ A + L + K +G + GY+ ++
Sbjct: 124 QVGYNWQISTWVFGVEAQGNWADFKGSNANLLVIPAPTTNQTKIDAFGLFTARVGYAWNN 183
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
LIY GG + + +A +G GL+Y S +
Sbjct: 184 ALIYVKGGAAVTSDKYTRFRTATGVFNDDA----SETRWGATVGTGLEYGFTPSWSFAVE 239
Query: 203 YRYIPHHIHSVNNSNAKSDVERVD-RKGNAHIASLGINMH 241
Y ++ + S +V V K + + + IN
Sbjct: 240 YDHLFLGGRDLTFSPVLPNVSNVSHIKQDVDVVTARINYR 279
>gi|254718340|ref|ZP_05180151.1| outer membrane protein [Brucella sp. 83/13]
gi|265983299|ref|ZP_06096034.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839562|ref|ZP_07472368.1| outer membrane protein [Brucella sp. NF 2653]
gi|264661891|gb|EEZ32152.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405348|gb|EFM61621.1| outer membrane protein [Brucella sp. NF 2653]
Length = 227
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 63/211 (29%), Gaps = 21/211 (9%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + + G+ G+N L
Sbjct: 29 QEPAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLG 88
Query: 101 D-FVFGINCHTTAAKD--------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
+ V GI+ T + + + G V +AGY+VD L Y GG
Sbjct: 89 NSVVLGIDGDVTYNDVSKNIDFLDGNDAGSFENRLRWSGAVRARAGYAVDRFLPYIAGGV 148
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + ++A + +G G+DY ++ L YRY +
Sbjct: 149 AFGSLRN-------RGEFEDASFSQSKTLTGWTIGAGMDYAATDNVILRLEYRYTDYGNK 201
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+A V + G+ F
Sbjct: 202 DYGFDDAA-----VTNNFKTNDIRFGVAYKF 227
>gi|85716040|ref|ZP_01047017.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
sp. Nb-311A]
gi|85697238|gb|EAQ35119.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
sp. Nb-311A]
Length = 206
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 79/229 (34%), Gaps = 26/229 (11%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
L + + + + D A V + + W+G Y+G ++ + + +
Sbjct: 4 TLIAALATMASTALIGTAQAADFSYRAPYTVNQPLNAF-SWAGPYLGGNLGYAWGSVQNS 62
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVV 133
T G++ G+N Q VFG+ A + TF K +G V
Sbjct: 63 LT-------KPDGVFGGVQAGYNWQSGSMVFGLEGDIQANAANDTFAAWKFSNPWFGTVR 115
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ GY+ ++L+YG GG + + ES + +G+G + +
Sbjct: 116 GRLGYAFSNVLVYGTGGLAFGKLRAETFALSESH-----------TNAGWTVGVGAEVGI 164
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + Y Y+ + + A + + G+N HF
Sbjct: 165 YQNWTAKVEYLYVDLSSSNFTITGAP-------HSYQSGLVRAGVNYHF 206
>gi|92118614|ref|YP_578343.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
hamburgensis X14]
gi|91801508|gb|ABE63883.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
hamburgensis X14]
Length = 206
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 72/191 (37%), Gaps = 25/191 (13%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
W+G Y+G ++ + + + T G++ G+N Q VFG+
Sbjct: 41 YSWAGPYLGGNLGYAWGSVQNSAT-------KPNGVFGGVQAGYNWQSGPLVFGLEGDIQ 93
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A D F R K +G V + GY+ +++LIYG GG + + ES
Sbjct: 94 ANAADDIFARWKFSNPWFGTVRGRLGYAFNNVLIYGTGGLAFGALRAETFGLSESH---- 149
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ +G+G ++ + + + Y Y+ + ++A +
Sbjct: 150 -------TNAGWTVGVGAEFGIYQNWTAKVEYLYVDLSSSNFTITDAPNS-------YQF 195
Query: 232 HIASLGINMHF 242
+ G+N HF
Sbjct: 196 GLVRAGVNYHF 206
>gi|27375206|ref|NP_766735.1| hypothetical protein blr0095 [Bradyrhizobium japonicum USDA 110]
gi|27348342|dbj|BAC45360.1| blr0095 [Bradyrhizobium japonicum USDA 110]
Length = 675
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 37/238 (15%), Positives = 71/238 (29%), Gaps = 36/238 (15%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS--RLYETHPLAD 74
+V+P S A DL L W+G Y+G H+ R + L D
Sbjct: 33 MVLPAASRAADLPLKAPALKT-------------VYDWTGLYIGAHVGVTRGTSSATLID 79
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA----------AKDDSTFYRLK 123
+ G++ G+N +L + G+ + + + +
Sbjct: 80 PTLATDDHVFTGATGGVQAGYNWRLNSGLLLGVEGDISFPNYLPSNHVVSSAATVLSSAE 139
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
E++ + + GY+ + L Y GG S + + +
Sbjct: 140 ERWDYVASLRARLGYTTGNWLFYATGGAAFTGERFL------STPTGGTEEKVLHTRFGW 193
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
G G++Y S Y Y +V + + + +G+N
Sbjct: 194 TAGGGVEYAFAPHWSARLEYLYSKFDNANVTFPSG----AQYSSSMDFQSLRIGLNRK 247
>gi|294853764|ref|ZP_06794436.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|294819419|gb|EFG36419.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|326553873|gb|ADZ88512.1| outer membrane protein Omp31 [Brucella melitensis M5-90]
Length = 223
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 43/237 (18%), Positives = 82/237 (34%), Gaps = 34/237 (14%)
Query: 25 AVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-------YETHPLADTIN 77
A D+ + + W+G Y+G++ + + D
Sbjct: 2 AADVVVSEPSAPTAAPVD--------TFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQ 53
Query: 78 RKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDSTF--------YRLKEKY 126
+ G G++ G+N QL++ V G + + + + K
Sbjct: 54 VSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKV 113
Query: 127 FIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
+G V + GY + + L++YG GG V D++ D + L
Sbjct: 114 EWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDASALHTWSDKTKAGWTL 170
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G G +Y +N + +L + Y Y ++ D ++ K N H +G+N F
Sbjct: 171 GAGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKVNFHTVRVGLNYKF 223
>gi|17988112|ref|NP_540746.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23501033|ref|NP_697160.1| outer membrane protein [Brucella suis 1330]
gi|62289100|ref|YP_220893.1| hypothetical protein BruAb1_0116 [Brucella abortus bv. 1 str.
9-941]
gi|82699038|ref|YP_413612.1| outer membrane protein [Brucella melitensis biovar Abortus 2308]
gi|161618107|ref|YP_001591994.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163842394|ref|YP_001626798.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189023375|ref|YP_001934143.1| outer membrane protein [Brucella abortus S19]
gi|225851659|ref|YP_002731892.1| outer membrane protein [Brucella melitensis ATCC 23457]
gi|254690429|ref|ZP_05153683.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|254694917|ref|ZP_05156745.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|254696123|ref|ZP_05157951.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254700932|ref|ZP_05162760.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|254705300|ref|ZP_05167128.1| outer membrane protein [Brucella suis bv. 3 str. 686]
gi|254707183|ref|ZP_05169011.1| outer membrane protein [Brucella pinnipedialis M163/99/10]
gi|254709272|ref|ZP_05171083.1| outer membrane protein [Brucella pinnipedialis B2/94]
gi|254713305|ref|ZP_05175116.1| outer membrane protein [Brucella ceti M644/93/1]
gi|254716341|ref|ZP_05178152.1| outer membrane protein [Brucella ceti M13/05/1]
gi|254731460|ref|ZP_05190038.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|256030795|ref|ZP_05444409.1| outer membrane protein [Brucella pinnipedialis M292/94/1]
gi|256045911|ref|ZP_05448785.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256112625|ref|ZP_05453546.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
gi|256158816|ref|ZP_05456677.1| outer membrane protein [Brucella ceti M490/95/1]
gi|256254201|ref|ZP_05459737.1| outer membrane protein [Brucella ceti B1/94]
gi|256258681|ref|ZP_05464217.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|256264830|ref|ZP_05467362.1| Omp25c [Brucella melitensis bv. 2 str. 63/9]
gi|260546397|ref|ZP_05822137.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260563196|ref|ZP_05833682.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567237|ref|ZP_05837707.1| Omp25c [Brucella suis bv. 4 str. 40]
gi|260755976|ref|ZP_05868324.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260759200|ref|ZP_05871548.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260760488|ref|ZP_05872834.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884997|ref|ZP_05896611.1| Omp25c [Brucella abortus bv. 9 str. C68]
gi|261215251|ref|ZP_05929532.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|261218122|ref|ZP_05932403.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221349|ref|ZP_05935630.1| Omp25c [Brucella ceti B1/94]
gi|261314664|ref|ZP_05953861.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316778|ref|ZP_05955975.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321031|ref|ZP_05960228.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751447|ref|ZP_05995156.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|261756010|ref|ZP_05999719.1| outer membrane protein [Brucella suis bv. 3 str. 686]
gi|265987849|ref|ZP_06100406.1| Omp25c [Brucella pinnipedialis M292/94/1]
gi|265992323|ref|ZP_06104880.1| Omp25c [Brucella melitensis bv. 1 str. Rev.1]
gi|265994065|ref|ZP_06106622.1| Omp25c [Brucella melitensis bv. 3 str. Ether]
gi|265997309|ref|ZP_06109866.1| Omp25c [Brucella ceti M490/95/1]
gi|297247516|ref|ZP_06931234.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
gi|17983866|gb|AAL53010.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23346897|gb|AAN29075.1| outer membrane protein, putative [Brucella suis 1330]
gi|46251229|gb|AAS84585.1| Omp25c [Brucella abortus]
gi|46251233|gb|AAS84587.1| Omp25c [Brucella canis]
gi|46251237|gb|AAS84589.1| Omp25c [Brucella pinnipedialis]
gi|46251239|gb|AAS84590.1| Omp25c [Brucella ceti]
gi|46251241|gb|AAS84591.1| Omp25c [Brucella ceti]
gi|46251243|gb|AAS84592.1| Omp25c [Brucella ceti]
gi|62195232|gb|AAX73532.1| outer membrane protein, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82615139|emb|CAJ10072.1| outer membrane protein, putative [Brucella melitensis biovar
Abortus 2308]
gi|161334918|gb|ABX61223.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163673117|gb|ABY37228.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189018947|gb|ACD71669.1| outer membrane protein, putative [Brucella abortus S19]
gi|225640024|gb|ACN99937.1| outer membrane protein [Brucella melitensis ATCC 23457]
gi|260096504|gb|EEW80380.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260153212|gb|EEW88304.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260156755|gb|EEW91835.1| Omp25c [Brucella suis bv. 4 str. 40]
gi|260669518|gb|EEX56458.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260670923|gb|EEX57744.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260676084|gb|EEX62905.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260874525|gb|EEX81594.1| Omp25c [Brucella abortus bv. 9 str. C68]
gi|260916858|gb|EEX83719.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260919933|gb|EEX86586.1| Omp25c [Brucella ceti B1/94]
gi|260923211|gb|EEX89779.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293721|gb|EEX97217.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296001|gb|EEX99497.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303690|gb|EEY07187.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261741200|gb|EEY29126.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|261745763|gb|EEY33689.1| outer membrane protein [Brucella suis bv. 3 str. 686]
gi|262551777|gb|EEZ07767.1| Omp25c [Brucella ceti M490/95/1]
gi|262765046|gb|EEZ10967.1| Omp25c [Brucella melitensis bv. 3 str. Ether]
gi|263003389|gb|EEZ15682.1| Omp25c [Brucella melitensis bv. 1 str. Rev.1]
gi|263095286|gb|EEZ18913.1| Omp25c [Brucella melitensis bv. 2 str. 63/9]
gi|264660046|gb|EEZ30307.1| Omp25c [Brucella pinnipedialis M292/94/1]
gi|289467873|gb|ADC95621.1| 25kDa outer membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. M5]
gi|297174685|gb|EFH34032.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
gi|326408139|gb|ADZ65204.1| outer membrane protein, putative [Brucella melitensis M28]
gi|326537850|gb|ADZ86065.1| outer membrane protein [Brucella melitensis M5-90]
Length = 228
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 62/212 (29%), Gaps = 22/212 (10%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + + G+ G+N L
Sbjct: 29 QEPAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLG 88
Query: 101 D-FVFGINCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ V GI+ T ++ + + G V +AGY+VD L Y GG
Sbjct: 89 NSVVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAVDRFLPYIAGG 148
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ + + + +G G+DY ++ L YRY +
Sbjct: 149 VAFGSLRN-------RGEFEGTGFSQSKTLTGWTIGAGMDYAATDNVILRLEYRYTDYGN 201
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+A V + G+ F
Sbjct: 202 KDYGFDDAA-----VTNNFKTNDIRFGVAYKF 228
>gi|319408049|emb|CBI81703.1| Hemin binding protein C [Bartonella schoenbuchensis R1]
Length = 274
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 78/283 (27%), Gaps = 59/283 (20%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+ ++V + + A D+ + + W+G Y+G I
Sbjct: 4 KCVITASIFALVSASAAQAADM----PVQERPTTVLPQVVVAPAF-SWTGFYLGGQIGGF 58
Query: 67 YETHPLADTIN--------RKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDS 117
T K + G+ G N+ + FV G++ + +
Sbjct: 59 SSNSSWVRTSGDIQGILGHNKAFPKFSGFVGGLYAGSNVDFGNGFVLGVDTDIVWSGAKA 118
Query: 118 --------------------------------------TFYRLKEKYFIYGDVVLKAGYS 139
+ G ++ G++
Sbjct: 119 KASRSSLRTGNGARLAARAGVSTRAPALFEGTDNNASRVTESVTFSDKWSGATRVRLGFA 178
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
D ++ Y GG + + E+ + + + LG G+D+ + + L
Sbjct: 179 FDRIMPYVAGGIAYSQIKAVVAEERQGVETVIEQLSGSKTLVGYTLGAGVDFAMTDSVIL 238
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A YRY S ++NA + + +G+ F
Sbjct: 239 RAEYRYSDFGKKSFISNNA-------EIDLKTNDFRVGVAYKF 274
>gi|256368583|ref|YP_003106089.1| 25Kda outer membrane protein precursor [Brucella microti CCM 4915]
gi|255998741|gb|ACU47140.1| 25Kda outer membrane protein precursor [Brucella microti CCM 4915]
Length = 228
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 62/212 (29%), Gaps = 22/212 (10%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + + G+ G+N L
Sbjct: 29 QEPAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLG 88
Query: 101 D-FVFGINCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ V GI+ T ++ + + G V +AGY+VD L Y GG
Sbjct: 89 NSVVLGIDGDVTYNDVSKNIDFLDENNAAAAFENRLRWSGAVRARAGYAVDRFLPYIAGG 148
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ + + + +G G+DY ++ L YRY +
Sbjct: 149 VAFGSLRN-------RGEFEGTGFSQSKTLTGWTIGAGMDYAATDNVILRLEYRYTDYGN 201
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+A V + G+ F
Sbjct: 202 KDYGFDDAA-----VTNNFKTNDIRFGVAYKF 228
>gi|39934247|ref|NP_946523.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39648095|emb|CAE26615.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 226
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 70/189 (37%), Gaps = 25/189 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G ++ + T G++ G+N Q + VFG+ +
Sbjct: 63 WAGPYLGGNLGYSWGNVTNNIT-------KPSGFSGGVQGGYNWQSGNIVFGLEGDIQFS 115
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D TF + K +G + GY+++ +LIY GG + ++ ES +S
Sbjct: 116 TADDTFAQYKFSNPWFGTGRGRIGYAMNDVLIYATGGLAFGQLKGQNVFASESHSSA--- 172
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+G G ++ +S Y Y+ + + + NA +
Sbjct: 173 --------GWTVGAGAEFAFAPKLSAKVEYLYMSLSTSNFF-------ITGMPNGYNAGL 217
Query: 234 ASLGINMHF 242
GIN HF
Sbjct: 218 VRAGINYHF 226
>gi|90424285|ref|YP_532655.1| hypothetical protein RPC_2788 [Rhodopseudomonas palustris BisB18]
gi|90106299|gb|ABD88336.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 578
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 73/229 (31%), Gaps = 36/229 (15%)
Query: 49 DEYGIWSGNYVGLHISRLYE----------THPLADTINRKTYNSLLPNGLGIEL----- 93
W+G YVG + + T L + + + +G
Sbjct: 341 PLAVNWTGVYVGGQLGAGFGPKHWSDSIGSTTSLVNPGSDFPAGTPPGLNVGGFGKSTPM 400
Query: 94 ---------GHNIQLEDFVFGINCHTTAAKDDST--------FYRLKEKYFIYGDVVLKA 136
G+N Q V G+ A + + + G V +
Sbjct: 401 AGGLGGAQLGYNFQTGRTVLGVEADVAFADLKGSHTIYSGLGGGQAEAHTTALGSVTGRV 460
Query: 137 GYSVDSLLIYGMGGFGGA---YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
GY+V+ L+Y G A + +D+S + S +G GL+Y V
Sbjct: 461 GYAVERNLLYVKAGGAWAVTDHTLDTSSIFIPSQGEGCCHDNVRSTRLGWTVGAGLEYAV 520
Query: 194 NYDISLSASYRYIPHHIHSVNNS-NAKSDVERVDRKGNAHIASLGINMH 241
+ S Y Y+ SV+ NA+ + VD H+ +G+N
Sbjct: 521 DRHWSAKLEYDYMDFGSQSVSFPVNARLGLPSVDIDQAFHVVKMGVNYK 569
>gi|209885837|ref|YP_002289694.1| OmpA domain protein transmembrane region-containing protein
[Oligotropha carboxidovorans OM5]
gi|209874033|gb|ACI93829.1| OmpA domain protein transmembrane region-containing protein
[Oligotropha carboxidovorans OM5]
Length = 236
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 67/232 (28%), Gaps = 27/232 (11%)
Query: 19 VPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY--ETHPLADTI 76
A DL R W+G Y+G + + + + D
Sbjct: 14 SSTSVFAADLAA-RPYTKAP------PAPVAPIYNWTGLYIGAQVGGAFQGSSGFVTDDP 66
Query: 77 NRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDD-----STFYRLKEKYFIYG 130
G LG N Q ++V GI ++ F ++ K
Sbjct: 67 LVTGNRDDSSFLGGGVLGANYQFSPNWVLGIEGEFNGLSNNRYTFTDGFDGIRVKNDWLA 126
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
V + GY+ +IY GG + + + +G GL+
Sbjct: 127 SVTGRLGYTWGPGMIYAKGGVAF---------RDNGGIAATTPFLVSRDTTGYTVGAGLE 177
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YM S Y+Y ++ S V + + H GIN HF
Sbjct: 178 YMFAPAWSAKIEYQYYDFDRTALTFGTLPS---TVSYRDDLHTVKAGINYHF 226
>gi|75676711|ref|YP_319132.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
winogradskyi Nb-255]
gi|74421581|gb|ABA05780.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
winogradskyi Nb-255]
Length = 206
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 69/189 (36%), Gaps = 25/189 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G ++ + + + T G++ G N Q VFG+ A
Sbjct: 43 WAGPYLGGNLGYAWGSVQNSLT-------RPDGVFGGVQAGFNWQSGPVVFGLEGDIQAN 95
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ TF K +G V + GY+ +++L+YG GG + + ES
Sbjct: 96 AANDTFAAWKFSNPWFGTVRGRIGYAFNNVLVYGTGGLAFGKLRAETFGLSESH------ 149
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ +G+G + + + + Y Y+ S + A + +
Sbjct: 150 -----TSAGWTVGVGAEVGIYQNWTAKVEYLYVDLSSSSFTITGAP-------HSYQSGM 197
Query: 234 ASLGINMHF 242
GIN HF
Sbjct: 198 VRAGINYHF 206
>gi|299134246|ref|ZP_07027439.1| outer membrane protein Omp31 [Afipia sp. 1NLS2]
gi|298590993|gb|EFI51195.1| outer membrane protein Omp31 [Afipia sp. 1NLS2]
Length = 209
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 73/209 (34%), Gaps = 27/209 (12%)
Query: 36 LFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH 95
+A Q W+G Y+G ++ + + T GI+ G+
Sbjct: 26 YRRQAQPYTVNQPLNGYSWAGPYLGANLGYNFGDVSNSGTS-------PSGFSGGIQGGY 78
Query: 96 NIQLE-DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGG 153
N Q +V G+ A D TF K YG + + GY+++ + +IYG GG
Sbjct: 79 NWQFGTPWVLGLEADLQATGADDTFAAWKFSNPWYGTIRGRVGYAINPNFMIYGTGGLAF 138
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + E+ + +G G ++ + + SL A Y Y+ +
Sbjct: 139 GQLKGTMPGLSETH-----------TTAGWTVGGGAEFALTNNWSLKAEYMYVDLDSSNF 187
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + +G+N HF
Sbjct: 188 L-------ITGLPNGYQFSTVRVGVNYHF 209
>gi|316932716|ref|YP_004107698.1| putative outer-membrane immunogenic protein [Rhodopseudomonas
palustris DX-1]
gi|315600430|gb|ADU42965.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris DX-1]
Length = 207
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 70/189 (37%), Gaps = 25/189 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G ++ + T G++ G+N Q + VFG+ +
Sbjct: 44 WAGPYLGGNLGYGWGNVTNNIT-------KPSGFSGGLQGGYNWQSGNIVFGLEGDIQFS 96
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D TF K +G + GY+++ +LIY GG + +L ES +S
Sbjct: 97 TADDTFAPYKFSNPWFGTGRGRIGYAMNDVLIYATGGLAFGQLKGQNLAVSESHSSA--- 153
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+G G ++ +S Y Y+ ++ + + NA +
Sbjct: 154 --------GWTVGAGAEFAFAPKLSAKVEYLYMSLSTNNFF-------ITGMPNGYNAGM 198
Query: 234 ASLGINMHF 242
GIN HF
Sbjct: 199 VRAGINYHF 207
>gi|115524922|ref|YP_781833.1| hypothetical protein RPE_2916 [Rhodopseudomonas palustris BisA53]
gi|115518869|gb|ABJ06853.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 578
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 41/245 (16%), Positives = 75/245 (30%), Gaps = 37/245 (15%)
Query: 34 IDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT------------------ 75
D+ A W+G YVG H+ + +D
Sbjct: 324 GDVTPVAAAASVKAPPVAVHWTGAYVGGHLGAGFGPKHWSDPLGSSMALVDPGPPDYAVG 383
Query: 76 -------INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST--------FY 120
+ G+++G+N+Q+++ V G A +
Sbjct: 384 TPRGLNMAGFGKSTPMAGGLGGLQIGYNVQIDNTVLGFEVEAALADLKGSHTIYSGIGGG 443
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA---YVIDSSLEKVESDNSKNAKGRFD 177
+ + G + GY++D LIY G A + +++S
Sbjct: 444 QAEAHTKALGTFAGRLGYALDRSLIYVKAGGAWAVTDHTLNTSSVYGNVQGLDCCGDTVS 503
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN-SNAKSDVERVDRKGNAHIASL 236
V+G G++Y VN S + Y Y+ S+ +NA + H +
Sbjct: 504 SSRFGWVVGAGIEYAVNRTWSATFEYDYMDFGTQSIRFPTNAGLGLPPAAIDQAFHTVKM 563
Query: 237 GINMH 241
G+N
Sbjct: 564 GVNYK 568
>gi|260169699|ref|ZP_05756510.1| outer membrane protein [Brucella sp. F5/99]
gi|261759235|ref|ZP_06002944.1| outer membrane protein [Brucella sp. F5/99]
gi|261739219|gb|EEY27215.1| outer membrane protein [Brucella sp. F5/99]
Length = 228
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 62/212 (29%), Gaps = 22/212 (10%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + + G+ G+N L
Sbjct: 29 QEPAPVVVALTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLG 88
Query: 101 D-FVFGINCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ V GI+ T ++ + + G V +AGY+VD L Y GG
Sbjct: 89 NSVVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAVDRFLPYIAGG 148
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ + + + +G G+DY ++ L YRY +
Sbjct: 149 VAFGSLRN-------RGEFEGTGFSQSKTLTGWTIGAGMDYAATDNVILRLEYRYTDYGN 201
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+A V + G+ F
Sbjct: 202 KDYGFDDAA-----VTNNFKTNDIRFGVAYKF 228
>gi|90407045|ref|ZP_01215235.1| outer membrane protein [Psychromonas sp. CNPT3]
gi|90311916|gb|EAS40011.1| outer membrane protein [Psychromonas sp. CNPT3]
Length = 383
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 75/246 (30%), Gaps = 44/246 (17%)
Query: 2 NFNGYG--ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYV 59
NFN ALF V + VP ++ + D + NN YV
Sbjct: 40 NFNEIKKQALFSSVLFLLAVPAYAQVENSTSHEFSDYSDTRQNNAH-----------AYV 88
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
GL Y + + N+ G G+ G+ Q + F + T
Sbjct: 89 GLRGGGTYFEGACSSNGSECNDNTF---GYGLYGGY--QFISW-FALEGAVTHYGTPDAS 142
Query: 120 YRLKE-KYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
Y LK + G + Y + Y G + + +
Sbjct: 143 YGLKNISAEVLGSELTGVFSYDLSESFDAYARVGVAYQNI----------EKNSTGGSEL 192
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ ++ +G+DY V+ + SL Y++I K + H SL
Sbjct: 193 TSNEWGMLSALGVDYRVSQNWSLRGEYQFID------------GIGNSELMKSDMHFLSL 240
Query: 237 GINMHF 242
G+ HF
Sbjct: 241 GLTYHF 246
>gi|90422268|ref|YP_530638.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
gi|90104282|gb|ABD86319.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
Length = 447
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 71/216 (32%), Gaps = 26/216 (12%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN---SLLPNGLGIELGHNIQL 99
N Y W+G Y+G + + + +I + L G ++G+N Q
Sbjct: 234 NGLYAPAPVANWTGFYLGGNFGSAFARNRTTASIGPFSEQFNLGLDGFAGGGQVGYNWQA 293
Query: 100 EDFVFGINCHTTAAKDDS-------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
++V+G+ + K +G V + GYS+ S L YG GG+
Sbjct: 294 SNWVYGLEADFQGSTQRDNDTAVLFGLAAYDAKLPWFGTVRGRLGYSLGSTLFYGTGGYA 353
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYRYI 206
V + S+ S G G++ + + Y Y+
Sbjct: 354 YGNVKTTITAGTGSETI-------SKTASGWTAGAGIETPFTLLGLVGPNWTSKTEYLYV 406
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + K HI GIN HF
Sbjct: 407 DLGSTTSDFAGGLAPNT---IKVTEHIFRTGINYHF 439
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 65/242 (26%), Gaps = 33/242 (13%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
I + A DL W+G YVG++
Sbjct: 8 VALIGTAVSAQAADLATKAPYYKAPIVAV---------YDWTGFYVGVNAGAGLGRDRAI 58
Query: 74 DTINR----KTYNSLLPNGLGIELGHNIQ----LEDFVFGINCHTTAAKDDSTFY----- 120
TY G ++G+N Q V G+ A T
Sbjct: 59 QNFAPGLTSTTYLQPFGALGGGQIGYNYQTNSLFGPLVIGLEGDFQGADLSDTRTTLSGP 118
Query: 121 -RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+K + + G + +L Y GGF V + + A
Sbjct: 119 VNYSQKLDWFATARGRIGIARGPVLNYFTGGFAAGDVRTTVT-----EGGFTAFDSGKRT 173
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ +G G++ + + + Y ++ + + + + +I +G+N
Sbjct: 174 LTGWTIGSGVEAALGGNWTGKIEYLHLDLGNKTDSFLG-----QTLQTSVRENIFRVGLN 228
Query: 240 MH 241
Sbjct: 229 YR 230
>gi|49475066|ref|YP_033107.1| hemin binding protein c [Bartonella henselae str. Houston-1]
gi|49237871|emb|CAF27067.1| Hemin binding protein c [Bartonella henselae str. Houston-1]
Length = 276
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 34/274 (12%), Positives = 72/274 (26%), Gaps = 65/274 (23%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD------ 74
+ + A D+ +P W+G Y+G I +
Sbjct: 16 SVAQAADIVVP------PSPTPVAPVIVAPTFSWTGFYIGGQIGGFSSKTKMDILSKGKT 69
Query: 75 -TINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFY------------ 120
++ L G+ G N+ L + + G++ D T
Sbjct: 70 IPVSDDFLPKLSGFMGGLYAGSNVDLGNGLILGVDTDIIWTDKDDTKTVPPYEIAENHVN 129
Query: 121 ---------------------------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
K G ++ G++ + ++ Y GG
Sbjct: 130 YVNKMLKDAGINIGDNKLEAGKYTRALGFTFKEKWAGATRVRIGFAAERIMPYVAGGIAY 189
Query: 154 AYVIDSSLEKVESDNSK-----NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
+ D + + + LG G+D + ++ + A YRY
Sbjct: 190 TQLQDITSISITKKETGKVIASGNLSDETKTLVGYTLGAGVDLAMTNNVIVRAEYRYSDF 249
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+N ++ + + +G+ F
Sbjct: 250 GKKKFSN-------DKYETSYKTNDFRVGVAYKF 276
>gi|148256482|ref|YP_001241067.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
BTAi1]
gi|146408655|gb|ABQ37161.1| putative outer-membrane immunogenic protein precursor
[Bradyrhizobium sp. BTAi1]
Length = 236
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/244 (17%), Positives = 75/244 (30%), Gaps = 26/244 (10%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+F V+ + A D+ V W+G Y+G H+
Sbjct: 2 KRVFLSAVALTVLAAPAFAADMPARTYT------KAPVYTPPQAIYNWTGFYIGGHLGGA 55
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDSTFYRL--- 122
+ N + G++ G + Q ++V GI + ++T +
Sbjct: 56 FA-------GNNSLEGNNGRFLGGVQGGFDYQFAPNWVLGIEAQYSWMDRNTTNFGFPGA 108
Query: 123 ----KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
G V + GY+ L+Y GG+ D + V
Sbjct: 109 TVVSSTGANQLGSVTGRLGYTWGPALLYAKGGYAW---RDGNALGVNVAGVPAGFTTSGN 165
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+G GL+YM + S A Y+Y + + + V + H +G+
Sbjct: 166 TKDGYTVGGGLEYMFAPNWSAKAEYQYYNFGNTTF--TGGPAPVVGSRFNSDEHTVKVGV 223
Query: 239 NMHF 242
N F
Sbjct: 224 NYRF 227
>gi|146341076|ref|YP_001206124.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193882|emb|CAL77899.1| putative outer-membrane protein precursor [Bradyrhizobium sp.
ORS278]
Length = 237
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 79/243 (32%), Gaps = 22/243 (9%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L + +V+ + +LA DL R WSG Y+G +
Sbjct: 2 KKLLLMTTALVVLASPTLAADLAA-RPYTKAPAPMMA------AIYDWSGFYIGANGGGG 54
Query: 67 YETHPLA-DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL--- 122
+ + R+ + +G + G+ Q+ VFG+ A
Sbjct: 55 WSHNTWDLVGGGREGSHDSSGGTIGGQFGYRWQMGPVVFGVEAQGNWADFTGDNVSALFA 114
Query: 123 ---KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ K +G + GY+ +++L+Y GG + V
Sbjct: 115 TRNRTKTDAFGLFTGQVGYAFNNVLLYAKGGAAVTSNKYTITNAVTGAFLA----SNTDS 170
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
V+G GL+Y + S+ Y ++ +V+ SD K + + + +N
Sbjct: 171 RWGGVVGAGLEYGFAPNWSVGVEYDHLFMDRQTVSFGALGSD----SIKQDVDLFTARLN 226
Query: 240 MHF 242
F
Sbjct: 227 YRF 229
>gi|240851183|ref|YP_002972586.1| hemin binding protein C [Bartonella grahamii as4aup]
gi|240268306|gb|ACS51894.1| hemin binding protein C [Bartonella grahamii as4aup]
Length = 296
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 69/302 (22%), Gaps = 71/302 (23%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLY-----LPRKIDLFNEADNNVEYQDDEYGIWSGNYV 59
L + + + + + A D P+ + + WSG Y
Sbjct: 2 KTKCLIALSIFTFITTSTAQAADTVIFEQSKPKVSLQNDSSSRITPVTVSAPFSWSGFYF 61
Query: 60 GLHISRLYETHPLADT----------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
G I + L ++R G+ G NI L D VFG +
Sbjct: 62 GGQIGYFSSKNTLDYAQEARDGKWAWVDRNLSPKPSGLRAGLYAGSNIDLGDDLVFGFDT 121
Query: 109 HTTAAK-------------------------------------------DDSTFYRLKEK 125
+ D + K
Sbjct: 122 DIVWSGRKSTQTDNGKKILNELDSINIAFKEAGIPIIKPAAQDETIPNYGDIVVSSVTLK 181
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG-----RFDGHG 180
G + G++ L+ Y GG + +S
Sbjct: 182 EKWSGAARARIGFASHRLMPYIAGGIAYTQMQYIMSLLSKSQEDSTVFASGNVLDKTKTL 241
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+G G D + +I + YRY N + + H GI
Sbjct: 242 FGYTVGGGFDLAMTDNIIMRTEYRYSDFFKKKFAN-------DDLKISSQTHDVRFGIAY 294
Query: 241 HF 242
F
Sbjct: 295 KF 296
>gi|319406585|emb|CBI80227.1| Hemin binding protein D [Bartonella sp. 1-1C]
Length = 274
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 76/282 (26%), Gaps = 55/282 (19%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
L + + + A D+ P + + + W+G YVG I
Sbjct: 3 IKHLLVACSWTFIPVSMVQAADIMRPHQSQSYQPVPVISSSNN---FSWTGFYVGAQIGG 59
Query: 66 LYETHPLADT------------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA 112
+ T ++ L GI G N+ L + GI+
Sbjct: 60 FSGEATRSPTQDSVEEDSEGQEFSKIKSPKLSGFIGGIYAGSNVSLNKGLILGIDADVVW 119
Query: 113 A---------------------KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
+ S + G ++ G++VD ++ Y GG
Sbjct: 120 SGKKNTKVFDVQDMNILERSSTDVSSISISHSLQEKWAGATRMRVGFAVDRVVPYVSGGV 179
Query: 152 GGAYVIDSSLEKVESDNSKNAKG-----------RFDGHGSSVVLGIGLDYMVNYDISLS 200
+ + K + A+ +G G+D + ++ +
Sbjct: 180 SYVQLQNVFTAKGLARALAQARSASPSGSETKVLDETKILVGYSVGGGVDVAMTDNVIMR 239
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A YRY N VD + +G+ F
Sbjct: 240 AEYRYSDFGKKKFAKDN-------VDLSYKTNDFRVGVAYKF 274
>gi|39936434|ref|NP_948710.1| putative outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39650289|emb|CAE28812.1| putative outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 240
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 48/235 (20%), Positives = 77/235 (32%), Gaps = 24/235 (10%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
I + + A DL PR A E W+G YVG H+ +
Sbjct: 13 AVIALSAPAFAADL-PPRPYTKAAPAYTAPEV----VYNWTGFYVGGHVGGAWAGDNNIT 67
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTF------YRLKEKYF 127
+ + + G++ G + Q ++V GI + ++T E
Sbjct: 68 GNSGRFFG-------GVQGGADYQFATNWVIGIEAQYSWMSSNNTGVIFPGGSTATEDTR 120
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G V + GY+ L+Y GG+ DS L + +G
Sbjct: 121 GLGSVTGRLGYAWGPTLVYAKGGYAW---RDSDLSVASLGGVPSGYTTSGSRNDGYTVGA 177
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+YM S Y+Y + + +DV + + H GIN F
Sbjct: 178 GLEYMFAPSWSAKVEYQYYKFGDTTF--TGGPADVVGTSFRNDEHTVKAGINYRF 230
>gi|192292221|ref|YP_001992826.1| porin [Rhodopseudomonas palustris TIE-1]
gi|192285970|gb|ACF02351.1| porin [Rhodopseudomonas palustris TIE-1]
Length = 240
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 48/235 (20%), Positives = 77/235 (32%), Gaps = 24/235 (10%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
I + + A DL PR A E W+G YVG H+ +
Sbjct: 13 AVIALSAPAFAADL-PPRPYTKAAPAYTAPEV----VYNWTGFYVGGHVGGAWAGDNNIT 67
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTF------YRLKEKYF 127
+ + + G++ G + Q ++V GI + ++T E
Sbjct: 68 GNSGRFFG-------GVQGGADYQFATNWVIGIEAQYSWMSSNNTGVIFPGGSTATEDTR 120
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G V + GY+ L+Y GG+ DS L + +G
Sbjct: 121 GLGSVTGRLGYAWGPTLVYAKGGYAW---RDSDLSVASLGGVPSGYTASGSRNDGYTVGA 177
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+YM S Y+Y + + +DV + + H GIN F
Sbjct: 178 GLEYMFAPSWSAKVEYQYYKFGDTTF--TGGPADVVGTSFRNDEHTVKAGINYRF 230
>gi|115525004|ref|YP_781915.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
gi|115518951|gb|ABJ06935.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
Length = 219
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 72/238 (30%), Gaps = 30/238 (12%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+ + + S A DL WSG Y G+
Sbjct: 2 KKILLATTALLAMGATSFAADLPA--------RVYTKAPVLVAPGVNWSGFYAGVFGGYG 53
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQL--EDFVFGINCHTTAAKDDSTFYRLKE 124
+ D + T G G +N Q +VFGI + T ++
Sbjct: 54 WSQDIKVDGLAIATDEINGGFGGGTVG-YNWQAPGSQWVFGIEVDAAGSSLKYTTVGFED 112
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K +G V + GY+VD+ L Y GGF A + +
Sbjct: 113 KIDAFGSVTGRVGYAVDAALFYAKGGFAWADNKVTV-----------PGFSESKLHTGWT 161
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G GL+YM S+ Y Y + + N VD H G+N HF
Sbjct: 162 VGGGLEYMFAPAWSVKGEYMYADYGKETYGNI--------VDIGATVHTVKAGVNYHF 211
>gi|319408047|emb|CBI81701.1| Hemin binding protein C [Bartonella schoenbuchensis R1]
Length = 289
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 76/298 (25%), Gaps = 74/298 (24%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+ ++V + + A D+ + + W+G Y+G I
Sbjct: 4 KCVITASIFALVSASAAQAADM----PVQERPTTVLPQVVVAPAF-SWTGFYLGGQIGGF 58
Query: 67 YE------------THPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAA 113
++ K + G+ G N+ + FV G++ +
Sbjct: 59 SSNSSSKRIYQGVSKGKEDILVDNKAFPKFSGFVGGLYAGSNVDFGNGFVLGVDTDIVWS 118
Query: 114 KDDSTFY----------------------------------------RLKEKYFIYGDVV 133
D + + G
Sbjct: 119 GDKAKTSKSYDLPQTSDVQEVATRAEVSTGVPTLVEGADNNASRVTRNVTFSDKWSGATR 178
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR---------FDGHGSSVV 184
++ G + D ++ Y GG + + S S K
Sbjct: 179 VRLGAAFDRIMPYVAGGVAYSQLKASVENAKASGAQKAEGTSVEKPLEGLSDSKTMVGYT 238
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
LG G+D+ + + L A YRY + ++V+ + +G+ F
Sbjct: 239 LGAGVDFAMTDTVMLRAEYRYSDFGKKTF-------VKDKVEVDLKTNDFRVGVAYKF 289
>gi|115522948|ref|YP_779859.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
gi|115516895|gb|ABJ04879.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
Length = 207
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 63/191 (32%), Gaps = 25/191 (13%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
W+G Y+G ++ + GI+ G+N Q V+G+
Sbjct: 42 YSWAGPYLGGNLGYAWGDI-------HNNSAKPSGLSGGIQGGYNWQSGQMVYGLEGDLQ 94
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ TF + K +G V + GY+ ++++ YG GG + +S
Sbjct: 95 ITGANDTFAQYKFSNPWFGTVRGRIGYAFNNVMFYGTGGLAYGELTAEMGGLSQSH---- 150
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ +G G ++ + + + Y Y+ + +
Sbjct: 151 -------TNAGFTVGAGAEFGLMPNWTAKIEYLYVDLGESNF-------SLTTRSHSYEF 196
Query: 232 HIASLGINMHF 242
I G+N HF
Sbjct: 197 GIVRFGVNYHF 207
>gi|17989189|ref|NP_541822.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|17985044|gb|AAL54086.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
Length = 219
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 77/211 (36%), Gaps = 26/211 (12%)
Query: 51 YGIWSGNYVGLHISRL-------YETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED 101
W+G Y+G++ + + D + G G++ G+N QL++
Sbjct: 16 TFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDN 75
Query: 102 -FVFGINCHTTAAKDDSTF--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGF 151
V G + + + + K +G V + GY + + L++YG GG
Sbjct: 76 GVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGL 135
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
V D++ D + LG G +Y +N + +L + Y Y
Sbjct: 136 AYGKVK---SAFNLGDDASALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKR 192
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ D ++ K N H +G+N F
Sbjct: 193 NL----VDVDNSFLESKVNFHTVRVGLNYKF 219
>gi|148255876|ref|YP_001240461.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146408049|gb|ABQ36555.1| putative outer-membrane protein precursor [Bradyrhizobium sp.
BTAi1]
Length = 237
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 88/243 (36%), Gaps = 22/243 (9%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L +V+ + +LA DL R WSG Y+G++
Sbjct: 2 KKLLLTTTALVVLASPALAADLAA-RPYTKAPPPVMA------AIYDWSGFYIGVNGGGG 54
Query: 67 YETHPLAD-TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST------F 119
+ + R+ + +G ++G+ Q+ FVFG+ A
Sbjct: 55 WTHNTWDVVGGGREGSHDSSGGTIGGQVGYRWQMGQFVFGVEAQGNWADFAGDNQSALFG 114
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
R + K +G + GY+ +++L+Y GG S+ + + + G D
Sbjct: 115 TRNRTKTDAFGLFTGQVGYAFNNVLVYAKGGAAI----TSNTYTITNAATGAFLGSNDNT 170
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
V+G GL+Y + SL Y ++ +V+ SD K +A + + +N
Sbjct: 171 RWGGVVGAGLEYGFAPNWSLGVEYDHLFMDRQTVSFGALGSD----SIKQDADLFTARLN 226
Query: 240 MHF 242
F
Sbjct: 227 YRF 229
>gi|299132804|ref|ZP_07025999.1| Carbohydrate-selective porin OprB [Afipia sp. 1NLS2]
gi|298592941|gb|EFI53141.1| Carbohydrate-selective porin OprB [Afipia sp. 1NLS2]
Length = 694
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 64/210 (30%), Gaps = 24/210 (11%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYE--THPLADTINRKTYNSLLPNGLGIELGHNIQLEDF 102
+ WSG YVG H + + + D + T N G++ G+N+ L
Sbjct: 73 PVKAAPVFDWSGAYVGAHFAYGFGSSHASVFDGASFNTRNHFGTATAGVQAGYNVVLPSR 132
Query: 103 VF-GINCHTTAAK----------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
V G+ + + L E+ G + + GY+ L+Y GG
Sbjct: 133 VLLGVEADLSFPNYIESSGGVAVTPTMNGTLTERLDYAGSLRARLGYAAPRWLLYVTGGL 192
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
A D + + + G+G +Y + S Y Y +
Sbjct: 193 AFAGERFEYTSPAFDDKKLSL-------RTGWIAGVGAEYAIGPKWSARVEYLYSDYGRD 245
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMH 241
V + D LG+N
Sbjct: 246 HVQLGSGLQSASTFDV----QTIRLGLNRK 271
>gi|312112850|ref|YP_004010446.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
gi|311217979|gb|ADP69347.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
Length = 233
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 45/234 (19%), Positives = 87/234 (37%), Gaps = 24/234 (10%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
++ ++ VP + A D+Y + V+ W+G YVG++ +
Sbjct: 11 LAIIGAAVTVPLGANAADMYRAPAPTTYAPPPPIVQPNT-----WAGFYVGINGGYGWG- 64
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK--YF 127
+ T + G ++G+N Q +FV+G+ A + K
Sbjct: 65 -----ASDDSTRGDVNGGFGGGQIGYNFQSGNFVYGLETDLQAGRITGKSDDYASKETTD 119
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
+G + + GY+ + L+YG GGF V N + D + G
Sbjct: 120 WFGTLRGRLGYAFGNTLLYGTGGFAYGGVNQKM-------NYADVLFSNDDTRTGWTAGA 172
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
G++Y V+ + SL Y+Y+ ++ + + + H A +G+N
Sbjct: 173 GIEYKVSGNWSLKGEYQYVDFGKEDLSGAASTIEGPETS----FHTAKIGLNYR 222
>gi|27380621|ref|NP_772150.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27353786|dbj|BAC50775.1| outer-membrane immunogenic protein precursor [Bradyrhizobium
japonicum USDA 110]
Length = 237
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 68/203 (33%), Gaps = 20/203 (9%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFG 105
W+G Y+G H+ + + +S G++ G + Q ++V G
Sbjct: 38 PPQVIYNWTGFYIGGHVGGAFA-------GDSSFQSSDARFLGGVQGGFDYQFAPNWVVG 90
Query: 106 INCHTTAAKDD------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+ + + ++ G V + GY+ L+Y GG+
Sbjct: 91 VEAQYSWLPTNNNGVTFPLGTQVTSNTDQLGSVTGRIGYTWGPALVYAKGGYAWRNGGL- 149
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
V + +G GL+YM S A Y+Y + ++
Sbjct: 150 ---GVNVAGVPQGFTATGNNKDGYTVGAGLEYMFAPSWSAKAEYQYYNFGSTTF--TSGP 204
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+D+ V + + H +G+N F
Sbjct: 205 ADIVGVRGREDEHTVKVGVNYRF 227
>gi|27379978|ref|NP_771507.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27353131|dbj|BAC50132.1| bll4867 [Bradyrhizobium japonicum USDA 110]
Length = 258
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 68/210 (32%), Gaps = 14/210 (6%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA-DTINRKTYNSLLPNGLGIELGHNIQ 98
WSG Y+G++ R+ + +G ++G+ Q
Sbjct: 48 PYTKAPAMVAAIYDWSGFYIGINGGGGSAHSTWDLVGGGREGSHDATGGTVGGQIGYRWQ 107
Query: 99 LEDFVFGINCHTTAAKDDSTFYRL------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+VFG+ A + K +G + + GY+ +++LIY GG
Sbjct: 108 SGQWVFGVEGQGNWADFSGDNVSALFATRNRSKIDSFGLITGQVGYAWNNVLIYVKGGAA 167
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
A S D +G GL+Y + S+ Y +I
Sbjct: 168 VAGTKYEVFSTA----SGALLSSNDQTRWGGTVGAGLEYGFAPNWSVGVEYNHIFLQDKD 223
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V + + +R+ + + + +N F
Sbjct: 224 VTFA-GLAGTDRIRQDVDMGLVR--LNYKF 250
>gi|256060262|ref|ZP_05450437.1| outer membrane protein, putative [Brucella neotomae 5K33]
gi|261324235|ref|ZP_05963432.1| Omp25d [Brucella neotomae 5K33]
gi|46251251|gb|AAS84596.1| Omp25d [Brucella neotomae]
gi|261300215|gb|EEY03712.1| Omp25d [Brucella neotomae 5K33]
Length = 230
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 76/249 (30%), Gaps = 33/249 (13%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+ L ++++ + A D + A W+G Y G +
Sbjct: 3 FKNLLGASLVAVITSTSAYAADAIV---------AQEPAPIAIAPSFSWAGAYFGGQVGY 53
Query: 66 LYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFY--- 120
+ L + N T G+ G+N + F+ G++ + +
Sbjct: 54 GWGRAKLENRTNGSTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDFIT 113
Query: 121 -------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + G V +AGY++D + Y GG + +S +
Sbjct: 114 SGNPVQTTGETQLRWSGAVRARAGYAIDRFMPYIAGGVAFGGIKNSL-------RIGGEE 166
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ +G G+DY ++ L YRY + + ++ +
Sbjct: 167 SSKSKTQTGWTVGAGIDYAATDNVLLRLEYRYTDYGKKNFGLND-----LDTRGSFKTND 221
Query: 234 ASLGINMHF 242
LG+ F
Sbjct: 222 IRLGVAYKF 230
>gi|90426297|ref|YP_534667.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18]
gi|90108311|gb|ABD90348.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18]
Length = 251
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 76/241 (31%), Gaps = 33/241 (13%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY- 67
L V +++ +LA DL Y W+G Y+G H+ +
Sbjct: 27 LGTVALVAMATTVPALAADLGA-------RTYTKAPAYVAAPIYNWTGFYIGGHVGGAFV 79
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDSTF-----YR 121
+ R + + L G++ G++ Q ++V G+ + + Y
Sbjct: 80 GDDSIGTGATRSSDGTFLG---GVQGGYDYQFAPNWVLGVEAQYSWLDQGTDPVLVGPYS 136
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+K G V + GY+ L+Y GG+ A +
Sbjct: 137 FSDKQKGLGSVTGRIGYTWGPALLYAKGGYAFADYDTTV-------TLGGVGAAVSSKSD 189
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+G GL+Y+ + S Y+Y K + H+ G+N
Sbjct: 190 GYTVGAGLEYLFAQNWSGKVEYQYYDFGNVDF---------GGFSFKNDEHVVKAGLNYR 240
Query: 242 F 242
F
Sbjct: 241 F 241
>gi|192289773|ref|YP_001990378.1| outer-membrane immunogenic protein precursor [Rhodopseudomonas
palustris TIE-1]
gi|192283522|gb|ACE99902.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris TIE-1]
Length = 207
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 70/189 (37%), Gaps = 25/189 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G ++ + T G++ G+N Q + VFG+ +
Sbjct: 44 WAGPYLGGNLGYSWGNVTNNIT-------KPSGFSGGVQGGYNWQSGNIVFGLEGDIQFS 96
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D TF + K +G + GY+++ +LIY GG + ++ ES +S
Sbjct: 97 TADDTFAQYKFSNPWFGTGRGRIGYAMNDVLIYATGGLAFGQLKGQNVFASESHSSA--- 153
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+G G ++ +S Y Y+ + + + NA +
Sbjct: 154 --------GWTVGAGAEFAFAPKLSAKVEYLYMSLSTSNFF-------ITGMPNGYNAGL 198
Query: 234 ASLGINMHF 242
GIN HF
Sbjct: 199 VRAGINYHF 207
>gi|302319025|gb|ADL14702.1| outer membrane protein 31 [Brucella melitensis]
Length = 240
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 86/253 (33%), Gaps = 36/253 (14%)
Query: 11 FVVFLSIVV--PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-- 66
V+ SI ++A D+ + + W+G Y+G++
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSAPTVAPVD--------TFSWTGGYIGINAGYAGG 54
Query: 67 -----YETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ + D + G G++ G+N QL++ V G + +
Sbjct: 55 KFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGS 114
Query: 119 F--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + K +G V + GY + + L++YG GG V D++
Sbjct: 115 ISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDA 171
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D + LG G +Y N + +L + Y Y ++ D ++ K
Sbjct: 172 SALHTWSDKTKAGWTLGAGAEYAFNNNWTLKSEYLYPYLGKRNL----VDVDNSFLESKV 227
Query: 230 NAHIASLGINMHF 242
N H G+N F
Sbjct: 228 NFHTDRFGLNYKF 240
>gi|91977701|ref|YP_570360.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91684157|gb|ABE40459.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 237
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 76/235 (32%), Gaps = 19/235 (8%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
L +L + V + W+G Y+G ++ +
Sbjct: 5 LLSAAAVFALTAPAFAADLGPRTYTKAPPVYTPPEVVYNWTGFYIGGNVGGAFA------ 58
Query: 75 TINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDSTF------YRLKEKYF 127
+ + G++ G + Q ++V G+ + ++T E
Sbjct: 59 -GSNNIQSDAGRFMGGVQGGFDYQFAPNWVVGLEAQYSWMASNNTGVLFPLGSVATENTR 117
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G V + GYS L+Y GG+ DSSL + ++A +G
Sbjct: 118 GLGSVTGRLGYSWGPALLYAKGGYAF---RDSSLGVNTAAGVQSAYTTSGNRNDGYTVGA 174
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+YM S Y+Y S + +DV + + H GIN F
Sbjct: 175 GLEYMFAPSWSAKVEYQYYKFDNTSF--TGGPADVVGTTFRNDDHTVKAGINYRF 227
>gi|254700931|ref|ZP_05162759.1| outer membrane protein, putative [Brucella suis bv. 5 str. 513]
gi|261751446|ref|ZP_05995155.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|261741199|gb|EEY29125.1| outer membrane protein [Brucella suis bv. 5 str. 513]
Length = 232
Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 77/249 (30%), Gaps = 31/249 (12%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+ L ++++ + A D + A W+G Y G +
Sbjct: 3 FKNLLGASLVAVITSTSAYAADAIV---------AQEPAPIAIAPSFSWAGAYFGGQVGY 53
Query: 66 LYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFY--- 120
+ L + N T G+ G+N + F+ G++ + +
Sbjct: 54 GWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDFIT 113
Query: 121 -------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + G V +AGY++D + Y GG + +S + +
Sbjct: 114 SGNPVQTTGETQLRWSGAVRARAGYAIDRFMPYIAGGIAFGGIKNSLRI-----GGEESS 168
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ +G G+DY ++ L YRY + + ++ +
Sbjct: 169 KSKSKTQTGWTVGAGIDYAATDNVLLRLEYRYTDYGKKNFGLND-----LDTRGSFKTND 223
Query: 234 ASLGINMHF 242
LG+ F
Sbjct: 224 IRLGVAYKF 232
>gi|225851658|ref|YP_002731891.1| porin [Brucella melitensis ATCC 23457]
gi|256264831|ref|ZP_05467363.1| Omp25d [Brucella melitensis bv. 2 str. 63/9]
gi|225640023|gb|ACN99936.1| porin [Brucella melitensis ATCC 23457]
gi|263095287|gb|EEZ18914.1| Omp25d [Brucella melitensis bv. 2 str. 63/9]
gi|326408138|gb|ADZ65203.1| porin [Brucella melitensis M28]
gi|326537849|gb|ADZ86064.1| porin [Brucella melitensis M5-90]
Length = 230
Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 76/249 (30%), Gaps = 33/249 (13%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+ L ++++ + A D + A W+G Y G +
Sbjct: 3 FKNLLGASLVAVITSTSAYAADAIV---------AQEPAPIAIAPSFSWAGAYFGGQVGY 53
Query: 66 LYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFY--- 120
+ L + N T G+ G+N + F+ G++ + +
Sbjct: 54 GWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNHFILGLDANVDYNNLKKSRDFIT 113
Query: 121 -------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + G V +AGY++D + Y GG + +S +
Sbjct: 114 SGNPVQTTGETQLRWSGAVRARAGYAIDRFMPYIAGGVAFGGIKNSL-------RIGGEE 166
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ +G G+DY ++ L YRY + + ++ +
Sbjct: 167 SSKSKTQTGWTVGAGIDYAATDNVLLRLEYRYTDYGKKNFGLND-----LDTRGSFKTND 221
Query: 234 ASLGINMHF 242
LG+ F
Sbjct: 222 IRLGVAYKF 230
>gi|289467881|gb|ADC95625.1| 31kDa outer membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. M5]
Length = 219
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 77/211 (36%), Gaps = 26/211 (12%)
Query: 51 YGIWSGNYVGLHISRL-------YETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED 101
W+G Y+G++ + + D + G G++ G+N QL++
Sbjct: 16 TFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDN 75
Query: 102 -FVFGINCHTTAAKDDSTF--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGF 151
V G + + + + K +G V + GY + + L++YG GG
Sbjct: 76 GVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGL 135
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
V D++ D + LG G +Y +N + +L + Y Y
Sbjct: 136 AYGKVK---SAFNLGDDAGALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKR 192
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ D ++ K N H +G+N F
Sbjct: 193 NL----VDVDNSFLESKVNFHTVRVGLNYKF 219
>gi|86751713|ref|YP_488209.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86574741|gb|ABD09298.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 449
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 25/215 (11%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLE 100
N Y W+G Y+G + + ++ +L P+G G ++G+N Q
Sbjct: 237 NGMYITPPPANWAGLYLGGNFGGATARNRTTSSVIFSENFNLSPDGFVGGGQIGYNWQAS 296
Query: 101 DFVFGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
++VFG + + +K +G + GY+V S L Y GG+
Sbjct: 297 NWVFGAEADFQGSTQKDDRAAVLSSLLLYNQKLPWFGTARARLGYTVGSTLFYATGGYAY 356
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV------NYDISLSASYRYIP 207
V + + ++ F+ S +G G++ + + Y Y+
Sbjct: 357 GNVKTNVVTAFSNET-------FNRSRSGYAVGAGVETPFQLFGLLGPNWTSKTEYLYVD 409
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + K H+ GIN HF
Sbjct: 410 LGSTTDSFLGGAAVSTS---KVTNHMLRTGINYHF 441
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 68/249 (27%), Gaps = 36/249 (14%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
V I + A DL + A W+G Y+G ++
Sbjct: 4 ILVGVALIGSAVSAQAADLAVKAPYLKAPIAAV---------YDWTGFYIGANVGVGLGR 54
Query: 70 ---HPLADTINRKTYNSLLPNGLGIELGHNIQ-----LEDFVFGINCHTTAAKDDST--- 118
++ S G ++G+N Q L + G+ +
Sbjct: 55 DLQTHAVPAGGVASHLSPQGVIGGGQIGYNWQSNTTFLGPLLIGVEADIQGSGMTDGHTT 114
Query: 119 ------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+K + V + G ++ Y GGF A V +
Sbjct: 115 LSSPLGAANYNQKLDWFTTVRGRVGLVRGPVVGYFTGGFAAANVKTTVT-----QIGGIV 169
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
F + +G G++ + + + Y Y+ N + + +
Sbjct: 170 PFAFSETRTGWTIGSGVEAAIGGNWTGKIEYLYLDLGNR-----NDVFGTQALRTEYRES 224
Query: 233 IASLGINMH 241
I +G+N
Sbjct: 225 IFRVGLNYR 233
>gi|316933367|ref|YP_004108349.1| OmpA-like transmembrane region [Rhodopseudomonas palustris DX-1]
gi|315601081|gb|ADU43616.1| OmpA-like transmembrane region [Rhodopseudomonas palustris DX-1]
Length = 240
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 77/235 (32%), Gaps = 24/235 (10%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
I + + A DL PR A + W+G YVG H+ +
Sbjct: 13 AVIALSAPAFAADL-PPRPYTKAAPAYTAPQV----VYNWTGFYVGGHVGGAWA------ 61
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTF------YRLKEKYF 127
+ + G++ G + Q ++V GI + ++T E
Sbjct: 62 -GDNSIPGNSGRFFGGVQGGADYQFATNWVIGIEAQYSWMSSNNTGVIFPGGSTAVEDTR 120
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G V + GY+ L+Y GG+ DS L + A +G
Sbjct: 121 GLGSVTGRLGYAWGPTLVYAKGGYAW---RDSDLGVATAAGFPAAYTTSGSRNDGYTVGA 177
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+Y+ S Y+Y + + +DV + + H GIN F
Sbjct: 178 GLEYLFAPSWSAKVEYQYYKFGDTTF--TGGPADVVGTSFRNDEHTVKAGINYRF 230
>gi|307944219|ref|ZP_07659560.1| 22 kDa outer membrane protein [Roseibium sp. TrichSKD4]
gi|307772565|gb|EFO31785.1| 22 kDa outer membrane protein [Roseibium sp. TrichSKD4]
Length = 242
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 64/244 (26%), Gaps = 22/244 (9%)
Query: 5 GYGALFFVVFLSIVVPNHSLA-VDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHI 63
Y + + +I Y D E WSG Y G +
Sbjct: 15 EYKVMKRLACAAIAATVSVAGLAPSYAADLPQAAPTYDTTYEPAPSGRFDWSGAYAGGSL 74
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTT----AAKDDST 118
++ + + G+ G+N + + V G+
Sbjct: 75 GWVWSGFDTTSSPTGSFDHDTNGFSGGVHGGYNFAITPNIVAGVELDFQMTDLYENTVRN 134
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+K + GY++D L+YG G A + + D
Sbjct: 135 GVNVKTSSAWNSSARARLGYAMDRFLVYGTAGLAIADL-----------SINANGASEDT 183
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G G++ ++ +++ Y Y S +K + G+
Sbjct: 184 TALGWTAGAGVEGAISNNLTARVEYLYQDFGRESFTLGGSKY-----RADLDTSTVRFGL 238
Query: 239 NMHF 242
+ F
Sbjct: 239 SYKF 242
>gi|17988113|ref|NP_540747.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23501032|ref|NP_697159.1| outer membrane protein [Brucella suis 1330]
gi|62289099|ref|YP_220892.1| hypothetical protein BruAb1_0115 [Brucella abortus bv. 1 str.
9-941]
gi|82699037|ref|YP_413611.1| outer membrane protein [Brucella melitensis biovar Abortus 2308]
gi|148559864|ref|YP_001258156.1| putative outer membrane protein [Brucella ovis ATCC 25840]
gi|161618106|ref|YP_001591993.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163842393|ref|YP_001626797.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189023374|ref|YP_001934142.1| outer membrane protein [Brucella abortus S19]
gi|225626661|ref|ZP_03784700.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237814591|ref|ZP_04593589.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|254690428|ref|ZP_05153682.1| outer membrane protein, putative [Brucella abortus bv. 6 str. 870]
gi|254694916|ref|ZP_05156744.1| outer membrane protein, putative [Brucella abortus bv. 3 str.
Tulya]
gi|254707184|ref|ZP_05169012.1| outer membrane protein, putative [Brucella pinnipedialis
M163/99/10]
gi|254709271|ref|ZP_05171082.1| outer membrane protein, putative [Brucella pinnipedialis B2/94]
gi|254713306|ref|ZP_05175117.1| outer membrane protein, putative [Brucella ceti M644/93/1]
gi|254716340|ref|ZP_05178151.1| outer membrane protein, putative [Brucella ceti M13/05/1]
gi|254731459|ref|ZP_05190037.1| outer membrane protein, putative [Brucella abortus bv. 4 str. 292]
gi|256030794|ref|ZP_05444408.1| outer membrane protein, putative [Brucella pinnipedialis M292/94/1]
gi|256045910|ref|ZP_05448784.1| outer membrane protein, putative [Brucella melitensis bv. 1 str.
Rev.1]
gi|256112624|ref|ZP_05453545.1| outer membrane protein, putative [Brucella melitensis bv. 3 str.
Ether]
gi|256158815|ref|ZP_05456676.1| outer membrane protein, putative [Brucella ceti M490/95/1]
gi|256254200|ref|ZP_05459736.1| outer membrane protein, putative [Brucella ceti B1/94]
gi|256258680|ref|ZP_05464216.1| outer membrane protein, putative [Brucella abortus bv. 9 str. C68]
gi|256368582|ref|YP_003106088.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
microti CCM 4915]
gi|260169698|ref|ZP_05756509.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella sp.
F5/99]
gi|260546396|ref|ZP_05822136.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260563195|ref|ZP_05833681.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567238|ref|ZP_05837708.1| Omp25d [Brucella suis bv. 4 str. 40]
gi|260755975|ref|ZP_05868323.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260759199|ref|ZP_05871547.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260884996|ref|ZP_05896610.1| Omp25d [Brucella abortus bv. 9 str. C68]
gi|261215250|ref|ZP_05929531.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|261218121|ref|ZP_05932402.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221348|ref|ZP_05935629.1| Omp25d [Brucella ceti B1/94]
gi|261314665|ref|ZP_05953862.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316777|ref|ZP_05955974.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321032|ref|ZP_05960229.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261759234|ref|ZP_06002943.1| outer membrane protein [Brucella sp. F5/99]
gi|265987848|ref|ZP_06100405.1| Omp25d [Brucella pinnipedialis M292/94/1]
gi|265992322|ref|ZP_06104879.1| Omp25d [Brucella melitensis bv. 1 str. Rev.1]
gi|265994064|ref|ZP_06106621.1| Omp25d [Brucella melitensis bv. 3 str. Ether]
gi|265997308|ref|ZP_06109865.1| Omp25d [Brucella ceti M490/95/1]
gi|297247515|ref|ZP_06931233.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
gi|17983867|gb|AAL53011.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23346896|gb|AAN29074.1| outer membrane protein, putative [Brucella suis 1330]
gi|46251245|gb|AAS84593.1| Omp25d [Brucella abortus]
gi|46251247|gb|AAS84594.1| Omp25d [Brucella ovis]
gi|46251249|gb|AAS84595.1| Omp25d [Brucella canis]
gi|46251253|gb|AAS84597.1| Omp25d [Brucella ceti]
gi|46251255|gb|AAS84598.1| Omp25d [Brucella ceti]
gi|46251257|gb|AAS84599.1| Omp25d [Brucella ceti]
gi|46251259|gb|AAS84600.1| Omp25d [Brucella pinnipedialis]
gi|62195231|gb|AAX73531.1| outer membrane protein, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82615138|emb|CAJ10071.1| outer membrane protein, putative [Brucella melitensis biovar
Abortus 2308]
gi|148371121|gb|ABQ61100.1| putative outer membrane protein [Brucella ovis ATCC 25840]
gi|161334917|gb|ABX61222.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163673116|gb|ABY37227.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189018946|gb|ACD71668.1| outer membrane protein, putative [Brucella abortus S19]
gi|225618318|gb|EEH15361.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237789428|gb|EEP63638.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|255998740|gb|ACU47139.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
microti CCM 4915]
gi|260096503|gb|EEW80379.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260153211|gb|EEW88303.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260156756|gb|EEW91836.1| Omp25d [Brucella suis bv. 4 str. 40]
gi|260669517|gb|EEX56457.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260676083|gb|EEX62904.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260874524|gb|EEX81593.1| Omp25d [Brucella abortus bv. 9 str. C68]
gi|260916857|gb|EEX83718.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260919932|gb|EEX86585.1| Omp25d [Brucella ceti B1/94]
gi|260923210|gb|EEX89778.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293722|gb|EEX97218.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296000|gb|EEX99496.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303691|gb|EEY07188.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261739218|gb|EEY27214.1| outer membrane protein [Brucella sp. F5/99]
gi|262551776|gb|EEZ07766.1| Omp25d [Brucella ceti M490/95/1]
gi|262765045|gb|EEZ10966.1| Omp25d [Brucella melitensis bv. 3 str. Ether]
gi|263003388|gb|EEZ15681.1| Omp25d [Brucella melitensis bv. 1 str. Rev.1]
gi|264660045|gb|EEZ30306.1| Omp25d [Brucella pinnipedialis M292/94/1]
gi|297174684|gb|EFH34031.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
Length = 230
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 76/249 (30%), Gaps = 33/249 (13%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+ L ++++ + A D + A W+G Y G +
Sbjct: 3 FKNLLGASLVAVITSTSAYAADAIV---------AQEPAPIAIAPSFSWAGAYFGGQVGY 53
Query: 66 LYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFY--- 120
+ L + N T G+ G+N + F+ G++ + +
Sbjct: 54 GWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDFIT 113
Query: 121 -------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + G V +AGY++D + Y GG + +S +
Sbjct: 114 SGNPVQTTGETQLRWSGAVRARAGYAIDRFMPYIAGGVAFGGIKNSL-------RIGGEE 166
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ +G G+DY ++ L YRY + + ++ +
Sbjct: 167 SSKSKTQTGWTVGAGIDYAATDNVLLRLEYRYTDYGKKNFGLND-----LDTRGSFKTND 221
Query: 234 ASLGINMHF 242
LG+ F
Sbjct: 222 IRLGVAYKF 230
>gi|148255736|ref|YP_001240321.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407909|gb|ABQ36415.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 248
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 66/204 (32%), Gaps = 22/204 (10%)
Query: 54 WSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
W+G Y+GL + P + G +G+N Q+++ VFG+
Sbjct: 44 WTGFYIGLQGGGGWGRSDETFFNAPNGFGFAGTQRYDINGGFAGGVIGYNWQVDNIVFGL 103
Query: 107 NCHTTAAKDDSTFYRLK--------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
A + + K +GD+ + G++ L + GG +
Sbjct: 104 EGDYHWADINGRSGVITAGLGDSYFTKLRGFGDIKGRLGWAAGPALFFVSGGAAVGDLQH 163
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
++ + +G G +YM + S Y Y+ ++ +N
Sbjct: 164 RY-------DNPAFSTIQNDWRWGWTIGAGAEYMFAPNWSAKVEYNYLDFGKSTLQYNNP 216
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
R + H GI+ HF
Sbjct: 217 LVASNRSEWSDTVHTVKAGISYHF 240
>gi|86751789|ref|YP_488285.1| hypothetical protein RPB_4691 [Rhodopseudomonas palustris HaA2]
gi|86574817|gb|ABD09374.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 562
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 34/233 (14%), Positives = 67/233 (28%), Gaps = 32/233 (13%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS---LLPNGLGIELG 94
+ + W+G Y G H+ + +D Y GI+LG
Sbjct: 22 DLPRLPLSPAAPVQWSWTGLYWGAHLGGSFGQTSFSDPAGPGLYGGQVRSPAALAGIQLG 81
Query: 95 HNIQLE-DFVFGINCHTTAAKDDST-----------FYRLKEKYFIYGDVVLKAGYSVD- 141
+N Q +++ G+ +A + T + + + +AG+
Sbjct: 82 YNYQPNRNWLIGVEADVSAMNGNGTQSCLVSSGLFISANCRVRQDALATLTGRAGFVTGP 141
Query: 142 --SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
L+Y G + N + G G++ + S+
Sbjct: 142 GGRTLLYAKAGAAFLSERLD----ITIGNPIGSSTESTDGRWGWTAGAGIERALAPAWSV 197
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVD----------RKGNAHIASLGINMHF 242
Y Y + ++ V VD + H +G+N+ F
Sbjct: 198 KFEYDYANFGSRDMATPSSYRLVPGVDYFATPQGVSKVSQDLHAVKVGLNLKF 250
>gi|110632458|ref|YP_672666.1| outer membrane protein, 31 kDa [Mesorhizobium sp. BNC1]
gi|110283442|gb|ABG61501.1| outer membrane protein, 31 kDa [Chelativorans sp. BNC1]
Length = 237
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 45/251 (17%), Positives = 79/251 (31%), Gaps = 33/251 (13%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L + V+ + + A D+ W+G YVG++
Sbjct: 3 LLVATAAACVISSSAFAADIL------YDAPPAPPAPPPPPAPFNWTGPYVGVYGGIAAG 56
Query: 69 T--------HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK------ 114
+ T + GI++G++ Q+ ++V G A
Sbjct: 57 DIKHNLNVLGNVPFTGLLTERSRAGGAIGGIQVGYDWQVNNWVLGAVADIAATNYEVKNS 116
Query: 115 ---DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + K G V +AGY+ D L+YG GGF SD
Sbjct: 117 YYVLGTRIAKDSSKLSYLGTVRARAGYAWDRTLVYGHGGFAYGKTKQ------TSDFIGT 170
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ + +G G++Y V ISL + Y Y+ + S ++
Sbjct: 171 DTLKQSQTRTGWTIGAGVEYAVTDRISLGSEYSYVDFGKKDIYKDANIS----INEDVAL 226
Query: 232 HIASLGINMHF 242
H +N+ F
Sbjct: 227 HSVKAFLNVRF 237
>gi|146339995|ref|YP_001205043.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
ORS278]
gi|146192801|emb|CAL76806.1| conserved hypothetical protein; putative outer-membrane immunogenic
protein precursor; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 237
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 73/244 (29%), Gaps = 26/244 (10%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+F + + A D+ W+G Y+G H+
Sbjct: 2 KRVFLSAVALTALAVPAFAADMPARTYTKAPPMT------PPQAIYDWTGFYIGGHLGGA 55
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDSTFYRL--- 122
+ + N + G++ G + Q ++V GI + ++T +
Sbjct: 56 FAGGNGLEGNNARFLG-------GVQGGFDYQFAPNWVLGIEAQYSWMDRNTTNFGFPGA 108
Query: 123 ----KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
G V + GY+ L+Y GG+ D + V
Sbjct: 109 TVVTSTGANQLGSVTGRLGYTWGPALLYAKGGYAW---RDGNGLGVNVAGVPAGFTTSGN 165
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+G GL+YM + S A Y+Y + + + V H +G+
Sbjct: 166 AKDGYTVGAGLEYMFAPNWSAKAEYQYYNFGNTTF--TGGPAPVVGSRFNNEDHTVKVGV 223
Query: 239 NMHF 242
N F
Sbjct: 224 NYRF 227
>gi|91978859|ref|YP_571518.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB5]
gi|91685315|gb|ABE41617.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB5]
Length = 559
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 34/227 (14%), Positives = 63/227 (27%), Gaps = 32/227 (14%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL---LPNGLGIELGHNIQLE 100
+ W+G Y G H+ + +D Y GI+LG+N Q
Sbjct: 26 LPPAAPVLWNWTGLYWGAHLGGSFGASSFSDPAGPGIYGGNVRSPAAMAGIQLGYNYQPN 85
Query: 101 -DFVFGINCHTTAAKDDSTF-----------YRLKEKYFIYGDVVLKAGYSVD---SLLI 145
+++ G+ +A + T + + V +AG L+
Sbjct: 86 ANWLVGVEADLSALNGNGTNSCMVSSGLVISANCRVRQDAMATVTGRAGLVTGPGGRTLL 145
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y GG + N + G G++ + S+ Y Y
Sbjct: 146 YAKGGAAFLSERID----ITVGNPLRSSTDNSDGRWGWTAGAGIEQALAPAWSVKFEYDY 201
Query: 206 IPHHIHSVNNSNA----------KSDVERVDRKGNAHIASLGINMHF 242
V + + + H +G+N+ F
Sbjct: 202 ANFGSSDVATPASYRLVPWVGYFPTPQGTSKVSQDLHAVKVGLNLKF 248
>gi|217977074|ref|YP_002361221.1| porin [Methylocella silvestris BL2]
gi|217502450|gb|ACK49859.1| porin [Methylocella silvestris BL2]
Length = 254
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 50/251 (19%), Positives = 81/251 (32%), Gaps = 32/251 (12%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L ++ + + A DL A V W+G Y+G I +
Sbjct: 6 LLLASVGAVALAGTAFAADLPS--------RAPPPVYVPPAPIFTWTGVYIGGQIGYAWG 57
Query: 69 T-----HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY--- 120
T G +G+N+QL FV G+ + + +
Sbjct: 58 TQNANFGDSFIGTLGSVSYDTSGVLGGAHVGYNLQLSQFVVGLEGSVDGSSMSKSAFLTD 117
Query: 121 ------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
L + I G + + GY+ D +L+Y GG A V + D
Sbjct: 118 EFGNSLTLSAQSNIQGSIRGRVGYAWDRVLLYATGGVAFAGVKANFYGPFSYD------- 170
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER---VDRKGNA 231
+G GL+Y V + S+ A YRY + SN S V ++R
Sbjct: 171 SASSTRVGWTVGGGLEYAVTNNWSVRAEYRYSDFGHSTFYPSNYGSVVLTSPFINRHFKE 230
Query: 232 HIASLGINMHF 242
+ +G + F
Sbjct: 231 NQVQVGFSYKF 241
>gi|92115908|ref|YP_575637.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14]
gi|91798802|gb|ABE61177.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14]
Length = 245
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 43/242 (17%), Positives = 80/242 (33%), Gaps = 23/242 (9%)
Query: 2 NFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGL 61
N L V + + + A DL R Y+ W+G Y+G
Sbjct: 16 NVMKKILLASVAIVGMAAIVPAQAADLAA-RPYTKAP------VYEAAPIYNWTGFYLGG 68
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFY 120
H+ + + G ++G++ Q ++VFGI + + + +
Sbjct: 69 HVGGAFGGDHNLAAPGFTRNGNDGVFMGGGQIGYDYQFSPNWVFGIGANYSFLDTNDHPF 128
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ G V + GY+ L+Y GG+ A +++ +
Sbjct: 129 VNRG----LGSVTGRLGYTWGPALLYAKGGYAWADTRNTN------GFGGDTFSNNRIGR 178
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+G GL+YM + S Y+Y N + V + + H +G+N
Sbjct: 179 DGFTVGGGLEYMFTQNWSGLIEYQYYDFGTTRTTFRN-----QDVRFRNDEHTIKVGLNY 233
Query: 241 HF 242
F
Sbjct: 234 RF 235
>gi|85713475|ref|ZP_01044465.1| carbohydrate-selective porin OprB [Nitrobacter sp. Nb-311A]
gi|85699379|gb|EAQ37246.1| carbohydrate-selective porin OprB [Nitrobacter sp. Nb-311A]
Length = 668
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 68/215 (31%), Gaps = 23/215 (10%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHIS--RLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
A + W+G Y+G H T LAD T N G++ G+N+
Sbjct: 36 ASIPTKAVPHPIIQWTGLYLGAHAGFGGGRSTATLADPAPITTGNDFGGLISGVQAGYNL 95
Query: 98 QLED-FVFGINCHTTA----------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
QL + G+ + +K + + ++ G + GY+ L Y
Sbjct: 96 QLPSGLLLGVETDISFPSYIESNSFVSKLATARSDVTHQWDFIGSARGRIGYATGPWLTY 155
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
GG A + D + + G V G GL+Y S Y Y
Sbjct: 156 ATGGLAIAGERYLN------DPPSGDREKTLGSRLGWVAGAGLEYAFAPHWSARLEYLYY 209
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+V +A + + +G+N
Sbjct: 210 QFDKTNVQFPSAAQYTATM----DFQSIRVGLNRK 240
>gi|86749319|ref|YP_485815.1| putative outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572347|gb|ABD06904.1| putative outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 237
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 74/243 (30%), Gaps = 24/243 (9%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+ + A DL PR W+G Y+G ++
Sbjct: 2 KKFLLSAVALGALGAPAFAADL-GPRPAYTKAPPATAPTV----VYNWTGFYIGGNVGGA 56
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDD------STF 119
+ + + G++ G + Q ++V G+ + +
Sbjct: 57 FA-------GSNNLQSDSGRFMGGVQGGFDYQFAPNWVVGLEAQYSWMASNNTGVIFPAG 109
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
E G V + GY+ L+Y GG+ DSSL + A
Sbjct: 110 STATENTRGLGSVTGRIGYTWGPALLYAKGGYAF---RDSSLGVATAGGIPAAYSTSGSR 166
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+G GL+YM S Y+Y + ++ +D+ + + H GIN
Sbjct: 167 NDGYTVGAGLEYMFAPSWSAKVEYQYYKFDNTAF--TSGPADMVGTTFRNDDHTVKAGIN 224
Query: 240 MHF 242
F
Sbjct: 225 YRF 227
>gi|49475276|ref|YP_033317.1| hemin binding protein d [Bartonella henselae str. Houston-1]
gi|49238082|emb|CAF27289.1| Hemin binding protein d [Bartonella henselae str. Houston-1]
Length = 274
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 67/287 (23%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L S++ + + A D+ +P V W+G Y+G +
Sbjct: 4 KYLITTSIFSLISISIAQAADVIVPE---------QPVPVVAVPAFSWAGFYLGGQVGNF 54
Query: 67 YETHPLADTINRKTY----------NSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKD 115
L+ + KT L GI G N + + F+ GI+ +
Sbjct: 55 SSKTALSYLGDEKTGKWTPVKKEFVPKLSGFVGGIYAGSNFDINNGFIIGIDTDVMWSGK 114
Query: 116 DSTFY------------------------------------RLKEKYFIYGDVVLKAGYS 139
+T K +G +K G+
Sbjct: 115 KNTKIITWPEVPPEVSSEKKVERVSVGTNQDTSAEVTNGALSHTLKQKWFGATRVKVGFV 174
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESD----NSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
VD ++ Y GG + + ++ + + N LG G+D+ +
Sbjct: 175 VDRMMPYIAGGVAYTQLQNIFEKEADKTKKAIDISNVIHDEKKTMVGYTLGGGIDFAMTD 234
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + A YRY + + E+++ + + +G+ F
Sbjct: 235 NVIVRAEYRYSDYGKKKFAD-------EKIEMRYKTNDFRVGVAYKF 274
>gi|325293521|ref|YP_004279385.1| Outer membrane protein [Agrobacterium sp. H13-3]
gi|325061374|gb|ADY65065.1| Outer membrane protein [Agrobacterium sp. H13-3]
Length = 210
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/228 (17%), Positives = 74/228 (32%), Gaps = 21/228 (9%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
+++V + ++ V + WSG Y+G+ + +
Sbjct: 3 TLIVTSLLALSASTAMAADAVYETPAPPVAQETLPVFTWSGPYLGIQGGAGWANGDFS-A 61
Query: 76 INRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
+S LG G+N Q + +FV GI +D+ + + G V
Sbjct: 62 GGPVASDSFDGGILGAFAGYNYQFDNNFVLGIEGDVDYNWNDNDYAGVNIGTDWQGSVRG 121
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ GY+ D LIYG G G+ + +G GLDY
Sbjct: 122 RVGYAFDRALIYGTAG----------WTATRGFIETPGAGKDSTTFNGYTVGAGLDYAFT 171
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ YRY + D+ V+ + +G+ + F
Sbjct: 172 DNVFGRIEYRYNDYGDK---------DIFGVNTDFDQSTVKVGLGVKF 210
>gi|91975762|ref|YP_568421.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91682218|gb|ABE38520.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 207
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 70/189 (37%), Gaps = 25/189 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G ++ + + T G++ G+N Q + VFG+ +
Sbjct: 44 WAGPYLGGNLGYSFGNVTNSIT-------KPSGFNGGVQGGYNWQSGNIVFGLEGDIQFS 96
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D TF K +G + GY+++ LLIY GGF + L ES +S
Sbjct: 97 TADDTFAPYKFSNPWFGTARGRVGYAMNDLLIYATGGFAFGQLKGERLLSTESHSSA--- 153
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+G G ++ +S Y Y ++ + A + N +
Sbjct: 154 --------GWTVGAGAEFAFAPKLSAKVEYLYGSLSTNNFFITGAPNG-------YNFGV 198
Query: 234 ASLGINMHF 242
GIN HF
Sbjct: 199 VRAGINYHF 207
>gi|306844392|ref|ZP_07476982.1| outer membrane protein [Brucella sp. BO1]
gi|306275205|gb|EFM56955.1| outer membrane protein [Brucella sp. BO1]
Length = 230
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 76/249 (30%), Gaps = 33/249 (13%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+ L ++++ + A D + A W+G Y G +
Sbjct: 3 FKNLLGASLVAVITSTSAYAADAIV---------AQEPAPIAIAPGFSWAGAYFGGQVGY 53
Query: 66 LYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLED-FVFGINCHTTA----------A 113
+ L + N T G+ G+N + F+ G++ +
Sbjct: 54 GWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDFIT 113
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + G V +AGY++D + Y GG + +S +
Sbjct: 114 NGNPVQTTGETQLRWSGAVRARAGYAIDRFMPYIAGGVAFGGIKNSL-------RIGGEE 166
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ +G G+DY ++ L YRY + + ++ +
Sbjct: 167 SSKSKTQTGWTVGAGIDYAATDNVLLRLEYRYTDYGKKNFGLND-----LDTRGSFKTND 221
Query: 234 ASLGINMHF 242
LG+ F
Sbjct: 222 IRLGVAYKF 230
>gi|319403667|emb|CBI77252.1| Hemin binding protein d [Bartonella rochalimae ATCC BAA-1498]
Length = 295
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/309 (12%), Positives = 83/309 (26%), Gaps = 85/309 (27%)
Query: 4 NGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHI 63
N L ++++ + A D+ +P++I W+G Y+G I
Sbjct: 2 NNMKCLITTSVVALITASAVQAADIRVPQEIGETIVVAPAFS--------WTGFYLGAQI 53
Query: 64 SRLYETHPLADTINRKT----------YNSLLPNGLGIELGHNIQLED-FVFGINCHTTA 112
+ + + G G N+ L + + G++
Sbjct: 54 GGFSSKTSFSGPADDDSKKWLPLDKKLSPKPSGFIGGFYAGSNVDLGNGLILGVDTDVVF 113
Query: 113 AKDDSTF---------------------------------------------YRLKEKYF 127
+ T Y K
Sbjct: 114 SGQKDTKNDKVTSELDKDNNNNNAPAGAKDKDNGKPEPEKEPEKEKDVKFTQYDHTLKAK 173
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE--------------KVESDNSKNAK 173
G ++ G++ D ++ Y GG + D+ + + K+
Sbjct: 174 WAGATRIRIGFAADRIMPYVAGGVAYTQLQDTFTTLTGIKKVPAQKAEGTDKETSGKSNT 233
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
L G+D+ + ++ L A YRY ++N ++ + A+
Sbjct: 234 VDESKTMIGYTLAAGVDFAMTDNVLLRAEYRYSDFGKKKLHN-------DKFEVNYKAND 286
Query: 234 ASLGINMHF 242
+G+ F
Sbjct: 287 FRVGVAYKF 295
>gi|254718339|ref|ZP_05180150.1| outer membrane protein, putative [Brucella sp. 83/13]
gi|265983298|ref|ZP_06096033.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839561|ref|ZP_07472367.1| outer membrane protein [Brucella sp. NF 2653]
gi|306842593|ref|ZP_07475242.1| outer membrane protein [Brucella sp. BO2]
gi|264661890|gb|EEZ32151.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306287238|gb|EFM58726.1| outer membrane protein [Brucella sp. BO2]
gi|306405347|gb|EFM61620.1| outer membrane protein [Brucella sp. NF 2653]
Length = 230
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 76/249 (30%), Gaps = 33/249 (13%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+ L ++++ + A D + A W+G Y G +
Sbjct: 3 FKNLLGASLVAVITSTSAYAADAIV---------AQEPAPIAIAPGFSWAGAYFGGQVGY 53
Query: 66 LYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFY--- 120
+ L + N T G+ G+N + F+ G++ + +
Sbjct: 54 GWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDFIT 113
Query: 121 -------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + G V +AGY++D + Y GG + +S +
Sbjct: 114 SGNPVQTTGETQLRWSGAVRARAGYAIDRFMPYIAGGVAFGGIKNSL-------RIGGEE 166
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ +G G+DY ++ L YRY + + ++ +
Sbjct: 167 SSKSKTQTGWTVGAGIDYAATDNVLLRLEYRYTDYGKKNFGLND-----LDTRGSFKTND 221
Query: 234 ASLGINMHF 242
LG+ F
Sbjct: 222 IRLGVAYKF 230
>gi|158425586|ref|YP_001526878.1| outer membrane protein, 31 kDa precursor [Azorhizobium caulinodans
ORS 571]
gi|158332475|dbj|BAF89960.1| outer membrane protein, 31 kDa precursor [Azorhizobium caulinodans
ORS 571]
Length = 232
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 75/252 (29%), Gaps = 37/252 (14%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
AL V L+++ + A DL W+G Y+G ++
Sbjct: 3 KRALAGVSALALLGCGAASAADLATKYP--------VKAIAPVVPVFSWTGFYIGANVGY 54
Query: 66 LYETHPLADTINRK-----TYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDS-- 117
+ + + G ++G+N Q + V GI S
Sbjct: 55 AWGSTDFHGNTRTGLPYSYSVGGQDDWLGGGQIGYNYQFANNVVVGIEADIDWTGIGSSG 114
Query: 118 -------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ +G V + GY+ D L Y GG +V ++ V
Sbjct: 115 VAVNGPLAGQTINGSLDYFGTVRARLGYAFDKFLPYITGGAAWGHVDYGNIYGV------ 168
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+G G +Y V +I+ Y Y+ ++ N + +D N
Sbjct: 169 ----GTSSTNWGWTIGAGFEYAVTNNITAGLEYLYVDLGGNNYLFPN----LTSLDTSFN 220
Query: 231 AHIASLGINMHF 242
+ +N F
Sbjct: 221 MSVLRARVNYKF 232
>gi|83308662|emb|CAJ01570.1| outer membrane protein [uncultured bacterium]
Length = 238
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 66/194 (34%), Gaps = 12/194 (6%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G Y+G I + T L N + G +G+N+Q FV G+
Sbjct: 40 WAGLYLGGQIGYGWGTDTLTVFPRGFGTNFTPNGVVGGAHIGYNLQFNQFVAGLEGDVEG 99
Query: 113 AKDDSTFYR----LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
DS+F + + G + + G + D L+Y GG A S+N
Sbjct: 100 TSIDSSFSPGGVLYSTRIPVQGSIRGRVGVAFDRALLYATGGAEFA-------GFNTSEN 152
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ + +G G++Y V + S+ A YRY + V
Sbjct: 153 GFPGFDQNSTTRTGWTVGGGIEYAVTGNWSIRAEYRYADFGHLTDPTPFTFGFGSFVIHH 212
Query: 229 GNAHIASLGINMHF 242
+ G + F
Sbjct: 213 ETENAVRAGFSYKF 226
>gi|3914820|sp|Q52866|ROPB_RHILV RecName: Full=22 kDa outer membrane protein; Flags: Precursor
gi|525267|emb|CAA56751.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 248]
Length = 211
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 78/233 (33%), Gaps = 29/233 (12%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+I + + A D ++D EA E G W G Y+G +
Sbjct: 8 LMASVFAIAGVSAAQAAD-----RVDQVPEAPVAQEAPVKPAGSWEGFYLGGAGTY---- 58
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY 129
+ + + G + G+N Q V+G+ + DD + ++ KY
Sbjct: 59 ----NMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVENKYGWN 114
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G V + GY ++ L+YG G V S + +G G+
Sbjct: 115 GSVRGRVGYDMNPFLLYGTAGLAIGDVKVS-----------DDTSDESKTNFGYTVGAGV 163
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ V +I+ YRY + + D R + + LGI + F
Sbjct: 164 EAFVTNNITTRLEYRYTDYQSKDYD-----LDSGSFSRGYDENSVKLGIGVKF 211
>gi|296448558|ref|ZP_06890432.1| TonB-dependent receptor [Methylosinus trichosporium OB3b]
gi|296253924|gb|EFH01077.1| TonB-dependent receptor [Methylosinus trichosporium OB3b]
Length = 482
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 67/206 (32%), Gaps = 17/206 (8%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN-----SLLPNGLGIELGHNIQLED 101
W G YVG + + + L G+ G+N QL
Sbjct: 281 PPGSRYDWRGVYVGFDVGHAWGHDRFVPYYSVPNVGAPQSFDLTGVIGGLHAGYNWQLAS 340
Query: 102 FVFGINCHTTAAKDD-----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
V G+ A + L+ + G + + G++ D LL++G GG A V
Sbjct: 341 VVLGVETEFDATSLNRTVQQDAVTTLRSSSALQGSIRARFGWAFDRLLVFGTGGSQWAGV 400
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
++ + D+ + S V+G G++Y + A YR+ + N
Sbjct: 401 QNAYHIRGLGDSYST-------NHHSWVVGGGIEYALTDHWLGRAEYRFSDFGKNLDGNG 453
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + G++ F
Sbjct: 454 PIIWPLSFQSHHWKEDRLTAGLSWKF 479
>gi|115524371|ref|YP_781282.1| OmpA domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115518318|gb|ABJ06302.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris BisA53]
Length = 235
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 62/200 (31%), Gaps = 22/200 (11%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCH 109
W+G Y+G H+ + + + G++ G + Q ++V GI
Sbjct: 40 VYNWTGFYIGGHVGGAFAGDDNITGSDGR-------FLAGVQGGADYQFARNWVVGIEAQ 92
Query: 110 TTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
+ D L + G V + GYS L+Y GG+
Sbjct: 93 YSWLPTDGNGGLLYPGNTLVTQDNRGLGSVTGRLGYSWGPALLYAKGGYAFRDSSIDVS- 151
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ +G GL+Y+ + S Y+Y S + D+
Sbjct: 152 ----NLGAQPFATSGNKKDGYSVGGGLEYLFAPNWSAKVEYQYYNFGNTSF--TGGPPDI 205
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ + H GIN F
Sbjct: 206 VGSSVRNDEHTVKAGINYRF 225
>gi|115524895|ref|YP_781806.1| putative outer membrane protein [Rhodopseudomonas palustris BisA53]
gi|115518842|gb|ABJ06826.1| putative outer membrane protein [Rhodopseudomonas palustris BisA53]
Length = 247
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 36/238 (15%), Positives = 77/238 (32%), Gaps = 17/238 (7%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEA-DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD- 74
++ +A+ + P WSG Y+G +
Sbjct: 5 LLGSVGLIALGMAAPAFAADLPARTYTKAPPMIAAIYDWSGFYIGANGGWGSSRSSWDYL 64
Query: 75 ----TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-------FYRLK 123
+ + + G ++G+ Q +VFG+ A + ++
Sbjct: 65 GPGLAVGSEGSHDADGAVAGGQIGYRWQAGTWVFGLEAQGNWADLSGSNISSLFITDTIR 124
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K +G + GY+ ++ L+Y GG G + A G +
Sbjct: 125 TKVDAFGLFTGQFGYAWNNALLYVKGGAGVVSSKYDAFTTATG----AALGSANSTRWGG 180
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
G+GL+Y + S++ Y ++ S + NA + V + + + + + +N
Sbjct: 181 TAGVGLEYGFAPNWSVAVEYDHVWLDTKSADFYNAGAYVGTDNIRQDLDLVTARLNYR 238
>gi|209886326|ref|YP_002290183.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
gi|209874522|gb|ACI94318.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
Length = 208
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 77/212 (36%), Gaps = 29/212 (13%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIE 92
A Q W+G Y+G ++ + + + T + G++
Sbjct: 24 FSYRRQAAQPYTVNQPLNGFSWAGPYLGANLGYNWGSVSNSGT-------NPTGFAGGVQ 76
Query: 93 LGHNIQLE-DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGG 150
G+N Q +VFG+ A D TF K YG V + GY+++ + ++YG GG
Sbjct: 77 GGYNWQFGSPWVFGLEADIQATGADDTFAAWKFSNPWYGTVRGRVGYALNPNFMLYGTGG 136
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ S+ S S +G G ++ +N SL A Y Y+
Sbjct: 137 LAFGELKGSTPFYSASHVSA-----------GWTVGAGAEFALNNAWSLKAEYLYVDLDS 185
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++N + N +G+N HF
Sbjct: 186 SNIN---------GLPNGYNFSTVRVGVNYHF 208
>gi|190891678|ref|YP_001978220.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|218510868|ref|ZP_03508746.1| outer membrane protein [Rhizobium etli Brasil 5]
gi|190696957|gb|ACE91042.1| outer membrane protein [Rhizobium etli CIAT 652]
Length = 207
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 39/228 (17%), Positives = 65/228 (28%), Gaps = 29/228 (12%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+V + A D+ WSG Y G+ + +
Sbjct: 9 FLALVATTAFAADVVQDVPT---------APVAAAPVFTWSGPYFGIDGGAGWLNGDFS- 58
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
G G+N Q ++ V GI + ++ G V
Sbjct: 59 AGGASADEDFNGGVFGAFAGYNFQFDNIVVGIEGNIEHNWNEEDALGADVGTDWAGAVRG 118
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ GY+ D LIYG G+ + + +G G+D+ +
Sbjct: 119 RVGYAFDKALIYGAAGWAATR----------GYVDAPGFDKETETFNGYTVGAGVDFAIT 168
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+I YRY + D+ VD + H GI + F
Sbjct: 169 NNIFARGEYRYNDYGEK---------DILGVDVDLDQHELKFGIGVKF 207
>gi|148253259|ref|YP_001237844.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1]
gi|146405432|gb|ABQ33938.1| putative outer membrane protein precursor [Bradyrhizobium sp.
BTAi1]
Length = 206
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 70/222 (31%), Gaps = 32/222 (14%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKT 80
+ A D R+ N W+G Y+G + + +
Sbjct: 17 VSAQAADFNYGRQAPYTVNQPLNA-------YSWAGPYLGGTLGYEWGSV-------GNN 62
Query: 81 YNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV 140
G+ G+N Q +VFG + TF K +G V +AGY+
Sbjct: 63 PTKPSGLVGGLTAGYNWQNGPWVFGAEGDINLTGANDTFAPWKFSNPWFGTVRGRAGYAF 122
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+++L YG GG + + ES LG G ++ + + +
Sbjct: 123 NNILFYGTGGLAFGGLRGETFGLSESH-----------TSLGWTLGAGAEFGLAQNWTAK 171
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y YI + + AK + GIN HF
Sbjct: 172 IEYLYIDLDSSNFVITGAK-------NDYRFGVVRAGINFHF 206
>gi|312113917|ref|YP_004011513.1| hypothetical protein Rvan_1143 [Rhodomicrobium vannielii ATCC
17100]
gi|311219046|gb|ADP70414.1| hypothetical protein Rvan_1143 [Rhodomicrobium vannielii ATCC
17100]
Length = 292
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 54/289 (18%), Positives = 95/289 (32%), Gaps = 71/289 (24%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
+V N +LA DLY R L + +W G Y+G H+ + + DT
Sbjct: 1 MVAGNSALAADLYG-RGGGLKDGPFYEAPA------LWQGFYLGGHVGAAWSKADVDDTF 53
Query: 77 NRKTYNSLLPN------GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY---------- 120
+ + G +LG+N Q +FVFG+ K D++
Sbjct: 54 IYVGDPTYKGDLNTTSLTGGGQLGYNFQRGNFVFGVEGDIGYLKVDASKDVAFRPTSCVG 113
Query: 121 --------------------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY----- 155
+ +YGD+ + GY+ D L Y GG
Sbjct: 114 TYTSAPYTVNYDPKMCAVDTKYSASGDLYGDITGRLGYAFDRTLFYAKGGVAFLNGEFDA 173
Query: 156 ---VIDSSLEKVESDNSKNAKGRFDG----HGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
+ + +S NA +FD +G+G++Y + SL A Y++
Sbjct: 174 KYLGQNCASLGSDSHCLGNALSKFDYSHSETLVGWTIGVGVEYKLTPSWSLKAEYQHFNF 233
Query: 209 HIHSVNNSNA----------------KSDVERVDRKGNAHIASLGINMH 241
S + +++ + + A ++G+N H
Sbjct: 234 GSISYSYNDSYKIPANNVDYSGGHYHSTLDGKTKVDFTADAVTVGLNYH 282
>gi|22852215|dbj|BAC16222.1| hypothetical protein [Bartonella henselae]
Length = 265
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 77/271 (28%), Gaps = 63/271 (23%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
++++ + + A D+ +P + W+G Y+G + +
Sbjct: 3 VIALISASAAQAADVIVPH--------EVAPTVISAPAFSWTGFYIGGQVGNFSSKVEIT 54
Query: 74 DT------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST-------- 118
D ++ GI G N+ L + + G+ A +
Sbjct: 55 DPNKKDKLFSKDDTPKPSGFMGGIYAGSNMSLGNNMILGVETDAVWADREDAKTSSAKVI 114
Query: 119 ----------------------------------FYRLKEKYFIYGDVVLKAGY-SVDSL 143
L K G ++ G+ + D +
Sbjct: 115 REDELANFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLALKEKWSGATRVRIGFTAADRI 174
Query: 144 LIYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
+ Y GG A V S KV +++ + LG G+D+ + ++
Sbjct: 175 MPYVAGGVSYAQVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDFAMTDNVL 234
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
L A YRY ++ + D +
Sbjct: 235 LRAEYRYSDFGKEKFEKDGSELSYKTNDFRV 265
>gi|227821495|ref|YP_002825465.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
gi|227340494|gb|ACP24712.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
Length = 212
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 69/203 (33%), Gaps = 22/203 (10%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
A EY + WSG YVG + Y N + G G+ G+N+Q
Sbjct: 32 AAPAAEYTEPAVKNWSGAYVGGTANWHYGEAD------ATGNNKSVAFGGGLYGGYNVQD 85
Query: 100 EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
V+G A +DST K K + G + + G ++ +L+YG G S
Sbjct: 86 GQMVYGGEADVNYAGNDSTSSGRKVKQGVNGSLRGRVGVDMNPVLVYGTAGLALGNAKLS 145
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
G D G G + V +++ YRY + +
Sbjct: 146 -----------TPAGSDDKTLVGWTAGAGAETFVTDNVTARVEYRYTDYASKDF-----R 189
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ V + H LG+ + F
Sbjct: 190 AGGSTVSSGYDEHSVRLGMGVKF 212
>gi|12620578|gb|AAG60854.1|AF322012_159 ID352 [Bradyrhizobium japonicum]
Length = 620
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 75/234 (32%), Gaps = 24/234 (10%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL---LPNGL 89
+ A+ E WSG Y+G H+ Y + Y +
Sbjct: 72 ATTGTSMANLGREALPPSVWNWSGGYIGGHVGGGYGRTSFTNPFGPPIYGDVVDIPSFVA 131
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY-----------FIYGDVVLKAGY 138
G ++G+N Q +V+G+ +AA + L ++ + GY
Sbjct: 132 GGQIGYNWQNNSWVYGLELDASAAVASGSNTCLAASDLIVSANCNAAPNLFATGTGRIGY 191
Query: 139 SVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
+ L Y G + E + K FD V+G+G++ +
Sbjct: 192 AFGSLGQTLAYLKAGAAWQNNRGDIVNNFEGGDLPQEKTHFDYGQVGGVIGLGVEQALTP 251
Query: 196 DISLSASYRYIPHHIHSVNNSNAK-------SDVERVDRKGNAHIASLGINMHF 242
S++ Y Y+ SV ++ N HI +G+N HF
Sbjct: 252 SWSVNVEYDYLHFGGPSVATASTAKLSPSTILPASTTSLSSNYHIGKIGLNYHF 305
>gi|148255739|ref|YP_001240324.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407912|gb|ABQ36418.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 245
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 71/243 (29%), Gaps = 24/243 (9%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP--- 71
L ++ DL WSG Y G+ + T
Sbjct: 4 LLVITTALVGIAAAMPASAADLAARPYTKAPPVVVPILSWSGIYAGIQGGGGWGTSKETF 63
Query: 72 ----LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK---- 123
A + +G +G+N Q ++ V G+ + + +
Sbjct: 64 IGRFNAPGFLGTQNYNTNGGFVGGVIGYNWQFDNLVVGLEGDYHWSDINGRSAVINAGVG 123
Query: 124 ----EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
K +GD+ + GY+V L + GG + D + +
Sbjct: 124 DTYFTKLTSFGDIKGRLGYAVGPALFFVSGGAAVGELQHRY------DRAAGVFFGQNTT 177
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+G G +YM + S Y Y+ ++ R + K + H G+N
Sbjct: 178 RWGYTVGAGAEYMFAPNWSAKLEYNYLDFGKSTLQYVGVPG---RSEWKDSVHTVKAGLN 234
Query: 240 MHF 242
HF
Sbjct: 235 YHF 237
>gi|12620707|gb|AAG60983.1|AF322013_102 ID693 [Bradyrhizobium japonicum]
Length = 325
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 36/240 (15%), Positives = 81/240 (33%), Gaps = 17/240 (7%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
++ L+ + A + + WSG Y+G + +H
Sbjct: 88 ILILTACIGALCAAAPSFGTDLAGQPVKVKAAPLPVAAPIIDWSGYYMGANGGWG-TSHN 146
Query: 72 LADTINRKTY--NSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-------FYRL 122
D + ++ +G ++G+ Q+ + V+G+ A + +
Sbjct: 147 CWDFNGITSEGCHNSTGGTVGGQIGYRWQIFNMVYGLEGQGNWADFRGSNVSTAFPTDTV 206
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
+G + GY+ +++L+YG GG S+ V S + G+ +
Sbjct: 207 GTTTDAFGLLTGHIGYAFNAVLLYGKGGAAV----TSNTYYVNSVATGTELGKNNDVRWG 262
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
VLG G + + + S Y ++ +++ A + + + +N F
Sbjct: 263 GVLGAGAEVSLTPNWSAGVEYNHLFMQRSNISFPAALGA---DRAHQDVDLITARLNYKF 319
>gi|319898375|ref|YP_004158468.1| Hemin-binding protein E [Bartonella clarridgeiae 73]
gi|319402339|emb|CBI75878.1| Hemin-binding protein E [Bartonella clarridgeiae 73]
Length = 288
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 80/299 (26%), Gaps = 72/299 (24%)
Query: 4 NGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHI 63
N + +++ ++ + A D+ +P ++ W+G Y G +
Sbjct: 2 NVTRLMITSIWIFVLA-SMVQAADIMIP----YQQQSHQPAPMIVSSDFSWTGFYFGGQV 56
Query: 64 SRLYETHPL---------ADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAA 113
+ +++ K L G+ G N+ + + GI+ +
Sbjct: 57 GGFSSKSTVRGRRNSDAEWESLEPKYLPKLSGVIGGVYAGSNVNFGNGLILGIDTDMAWS 116
Query: 114 KDDST------------------------------------------------FYRLKEK 125
T K
Sbjct: 117 GKKDTKIIHREEQNEETVEEESTRRQENTRNNNSRVERSVQVCAVAEEGSNPVSSSHTLK 176
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG--SSV 183
G ++ G++VD ++ Y GG + D + E + D
Sbjct: 177 EKWVGATRVRIGFAVDRVMPYVSGGVAYTQLQDLLTIRKEGKELPITRNVIDDTKVFVGY 236
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G G+D+ + + L A YRY ++++ + +G+ F
Sbjct: 237 TFGGGIDFAMAKSVILRAEYRYSDFGKKKF-------AKDKMEIGYKTNDFRVGVAYKF 288
>gi|86748303|ref|YP_484799.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86571331|gb|ABD05888.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 207
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 25/189 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G ++ + T G++ G+N Q + VFG+ +
Sbjct: 44 WAGPYLGGNLGYAFGNVTNNIT-------KPSGFSGGVQGGYNWQSGNIVFGLEGDIQFS 96
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ TF K +G + GY+++ +L+Y GG + L ES
Sbjct: 97 TANDTFASYKFSNPWFGTARGRVGYAMNDILLYATGGLAFGQLKGEYLLSSESH------ 150
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ +G G ++ +S Y Y ++ + A + N +
Sbjct: 151 -----TSAGWTVGAGAEFAFAPKLSAKVEYLYGSLSTNNFFITGAPNG-------YNFGL 198
Query: 234 ASLGINMHF 242
GIN HF
Sbjct: 199 IRAGINYHF 207
>gi|217979266|ref|YP_002363413.1| OmpA domain protein transmembrane region-containing protein
[Methylocella silvestris BL2]
gi|217504642|gb|ACK52051.1| OmpA domain protein transmembrane region-containing protein
[Methylocella silvestris BL2]
Length = 240
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 25/204 (12%)
Query: 54 WSGNYVGLHISRLYETHPLADTINR---------KTYNSLLPNGLGIELGHNIQLEDFVF 104
W+G Y+G + + + T T G +G+N Q+++FV
Sbjct: 33 WAGFYLGGQVGYGWGSDSGNVTGGFPLSPTIQTASTSTQTQGAIGGAHIGNNWQIQNFVI 92
Query: 105 GINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
G+ L + + G V + GY++D L+Y GG ++
Sbjct: 93 GLEGDVNGTTLSKMSTPLFNNLYFPYTQSPVQGTVRGRLGYALDRTLLYATGGLAYGWIH 152
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ N ++ F + +G G+++ VN + S+ A YRY ++
Sbjct: 153 NDY-------NIFGSRSSFSTTKAGWTIGGGVEFAVNDNWSVRAEYRYTRFG--YFSDGP 203
Query: 218 AKSDVERVDRKGNAHIASLGINMH 241
+ +G +
Sbjct: 204 IAYPTVSQSHSSTQNQLQVGFSYK 227
>gi|27380105|ref|NP_771634.1| hypothetical protein blr4994 [Bradyrhizobium japonicum USDA 110]
gi|27353259|dbj|BAC50259.1| blr4994 [Bradyrhizobium japonicum USDA 110]
Length = 296
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 69/214 (32%), Gaps = 21/214 (9%)
Query: 50 EYGIWSGNYVGLHISRLYET------HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
WSG Y+G++ P+ T+ + ++ +G ++G+ Q +V
Sbjct: 75 AIYDWSGFYIGINGGGGSAHSCWDFVTPVTGTLVGEGCHNATGGTIGGQVGYRWQSASWV 134
Query: 104 FGINCHTTAAKDDS-------------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
FG+ A T R + + +G + + GY+ +S+L+Y GG
Sbjct: 135 FGLEGQGNWADFSGDNISLLFPGSALVTGDRNRSRIDSFGLITGQVGYAWNSVLLYVKGG 194
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH- 209
+ + +G GL++ + S+ Y +I
Sbjct: 195 AAVVGDKFDIYAAPGTPGAGTLLASGRDTRWGATVGAGLEFGFAPNWSVGVEYDHIFLGH 254
Query: 210 -IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + + +N F
Sbjct: 255 QTRDLTVPGTGLLFQTNRISQDVDMGLVRLNYRF 288
>gi|27379826|ref|NP_771355.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27352979|dbj|BAC49980.1| blr4715 [Bradyrhizobium japonicum USDA 110]
Length = 283
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 47/269 (17%), Positives = 85/269 (31%), Gaps = 43/269 (15%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
++ ++ DL V+ W+G YVG ++ + T +
Sbjct: 7 LVLAGVVAVGAAWGTAHAADLAPTYKMPVKAIAPVQT-WNGFYVGGNVGYDWSTGSTGIS 65
Query: 76 INRKT--------------------YNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK 114
+ S G++ G+N Q+ ++ G+ A
Sbjct: 66 VLSTDPALAAPLAALVAAGSFPTALSPSAKGVIGGVQAGYNWQVAPQWLVGLEADFQGAD 125
Query: 115 D-------------DSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSS 160
D+T + + +G V + G V L+YG GGF S
Sbjct: 126 VKGTTTQALAPVGFDATSTTVSKGIDWFGTVRGRVGVLVAPQWLLYGTGGFAYGRTKSSF 185
Query: 161 LEKVESDN-----SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ + A G G + G G + M + S A Y Y+ ++N
Sbjct: 186 STTDVTGGCIVGATICASGASSGTSTGWTAGAGTEVMFAPNWSFKAEYLYVDLGRRTLNV 245
Query: 216 SNA--KSDVERVDRKGNAHIASLGINMHF 242
+++ + V IA +G+N HF
Sbjct: 246 ASSTVPAIVFTTSTPFREQIARVGVNYHF 274
>gi|319405139|emb|CBI78745.1| Hemin binding protein d [Bartonella sp. AR 15-3]
Length = 262
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 79/275 (28%), Gaps = 46/275 (16%)
Query: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
MN F VF+ + + A D+ P + + W+G Y G
Sbjct: 1 MNVRNLMMAFIWVFIPVSI---VQAADIMKPHQSQSYQPVPLIAS---SSSFSWTGFYFG 54
Query: 61 LHISRLYETHPLADTINRKTYNSL-----LPNGLGIELGHNIQLE-DFVFGINCHTTAAK 114
I L D + + L G+ G N+ L D + GI+ +
Sbjct: 55 GQIGGFSGEATLKDKNDASEDSKLLSPELSGFIGGVYAGSNVGLGKDLILGIDTDMVWSG 114
Query: 115 DDST----------------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
T + K G ++ G+ VD ++ Y GG
Sbjct: 115 KKYTKVVNVPGDIEKVTYRFIKRPNDRFDYVLKEKWAGATRMRVGFIVDRVMPYVSGGVS 174
Query: 153 GAYVID-----SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
+ SS + ++ K +G G+D + ++ + A YRY
Sbjct: 175 YVQLQSVFEVKSSNTQKQNVGINEVKLDETKILVGYSIGGGIDVAMTDNVVMRAEYRYSD 234
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + +G+ F
Sbjct: 235 FGKKKFAEEDG-------ELSYKTNDFRVGVAYKF 262
>gi|146340934|ref|YP_001205982.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193740|emb|CAL77757.1| putative outer-membrane protein; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 261
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 82/258 (31%), Gaps = 26/258 (10%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
AL ++++ + A D + R W+G Y+GL+
Sbjct: 2 QKTALITTASVALLGLAPASAAD-FATRPYGKAPPPAYVTPLPS-----WAGFYLGLNGG 55
Query: 65 RLYET---------HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
+ + ++ +G ++G+ Q +VFG+
Sbjct: 56 ADWSRNCWTLNNVGGVPVAPRQSEGCHNASSGLIGGQVGYRWQAASWVFGLEAQGNWTDL 115
Query: 116 DSTFYRL---------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS-SLEKVE 165
S+ K G + GY+ D++L Y GG A+ + +
Sbjct: 116 KSSNASTAALAAGITNTTKTDAIGLFTGQVGYAWDNVLWYVKGGAAVAHNKYTGTANAAA 175
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+G G++Y + S++ Y ++ ++ + R+
Sbjct: 176 PVAVGTLLDSASETRWGGTVGTGVEYGFAPNWSVAVEYDHLFMGSRDISFPATANVNSRI 235
Query: 226 D-RKGNAHIASLGINMHF 242
D K + IA++ +N F
Sbjct: 236 DTIKQDIDIATVRVNYRF 253
>gi|307315839|ref|ZP_07595348.1| porin [Sinorhizobium meliloti BL225C]
gi|306898513|gb|EFN29191.1| porin [Sinorhizobium meliloti BL225C]
Length = 208
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 30/234 (12%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+ + ++A D+ ++ + + WSG Y+G+ + +
Sbjct: 4 ILFCSFILFGSSGAMAADVTFD---------NSALPPVSEAPFSWSGAYIGVQGGGGWAS 54
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ LG +G+N Q ++ V GI ++ +
Sbjct: 55 GEFS-GFGINGSEDANGGSLGGFVGYNYQFDNNLVLGIEGDVEHDWNEQQVFGADFGTDW 113
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G V + GY+ D+ LIY G+ G+ + + +G G
Sbjct: 114 AGSVRGRLGYAFDNALIYATAGWAATR----------GYVEVPGLGKDEKTFNGYTVGAG 163
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
LDY + YRY + D++ ++ + H +G+ + F
Sbjct: 164 LDYAFTNQVFGRVEYRYNDYGDQ---------DLQGINVDVDQHAVKVGLGIKF 208
>gi|154246285|ref|YP_001417243.1| porin [Xanthobacter autotrophicus Py2]
gi|154160370|gb|ABS67586.1| porin [Xanthobacter autotrophicus Py2]
Length = 207
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 68/210 (32%), Gaps = 30/210 (14%)
Query: 34 IDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIEL 93
+ Q W+G Y+G + + + +D G +
Sbjct: 27 SGRYPAPYAQPYVQPVAAFTWTGFYIGANAGYGWGSTVNSDPGGFIG---------GFQA 77
Query: 94 GHNIQL-EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G+N Q FV G+ + + Y L G V + G+S D +L+YG GGF
Sbjct: 78 GYNYQFASPFVLGVETDFNFSGLSAGGYSL----DYLGTVRARLGWSFDRVLVYGTGGFA 133
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
L + +G G + + + S A Y Y+ +
Sbjct: 134 YGQGSLDVLGL-----------SSSSTQTGWTIGAGAEVAFDRNWSARAEYLYVDLGSAT 182
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + VD NA+I G+N F
Sbjct: 183 Y-----PTVIGPVDSGINANILRAGVNYRF 207
>gi|222082486|ref|YP_002541851.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221727165|gb|ACM30254.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 230
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 72/206 (34%), Gaps = 22/206 (10%)
Query: 48 DDEYGIWSGNYVGLHISRL------YETHPLADTINRKTYNSLLPNGLGIELGHNIQLE- 100
+ W+G YVGL+ + H + + G ++G+N Q++
Sbjct: 36 EQPVFTWTGFYVGLNGGGAFGGDDKFGLHSGDTFLGKFGKIEGSGFFGGGQIGYNYQVDP 95
Query: 101 DFVFGINCHTTAAKD----DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
++V G+ A + K +G + + GY+ D+ L YG GG ++
Sbjct: 96 NWVIGLEADFQGANIHDSVTNDGAHGSSKINWFGTLRPRVGYAYDNTLFYGTGGLAYGHI 155
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D + VLG G+++ +++ Y+Y+ +
Sbjct: 156 DYKGSLD------GVGSFSEDKTKAGWVLGAGVEHAFTDNVTAKLEYQYVDFGSFT---- 205
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
A D + H +G+N F
Sbjct: 206 -AGGDALSSKATADFHSIRVGVNYKF 230
>gi|86749266|ref|YP_485762.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572294|gb|ABD06851.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 274
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 62/187 (33%), Gaps = 20/187 (10%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-------- 118
+ + Y++ G+ +G+N Q VFG+ A + T
Sbjct: 87 FAAANTPAFFGSQKYDTSGGFAGGV-VGYNWQSGAVVFGLEGDYHWADINGTSSVINVGP 145
Query: 119 ---FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
K +GD+ + GY+ L + GG + D
Sbjct: 146 PNLGDTYSTKLRGFGDIKGRLGYAAGPALWFVSGGAAVGDLQHRY------DGGAANTFV 199
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ +G G++YM S Y YI ++ + A ++ R + K H
Sbjct: 200 QNKTKWGYTVGAGVEYMFAPSWSAKLEYNYIDLGRSTIQYTAAPTN--RSEWKDTFHTVK 257
Query: 236 LGINMHF 242
+GIN HF
Sbjct: 258 VGINYHF 264
>gi|27376983|ref|NP_768512.1| hypothetical protein bll1872 [Bradyrhizobium japonicum USDA 110]
gi|27350125|dbj|BAC47137.1| bll1872 [Bradyrhizobium japonicum USDA 110]
Length = 602
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 75/234 (32%), Gaps = 24/234 (10%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL---LPNGL 89
+ A+ E WSG Y+G H+ Y + Y +
Sbjct: 54 ATTGTSMANLGREALPPSVWNWSGGYIGGHVGGGYGRTSFTNPFGPPIYGDVVDIPSFVA 113
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY-----------FIYGDVVLKAGY 138
G ++G+N Q +V+G+ +AA + L ++ + GY
Sbjct: 114 GGQIGYNWQNNSWVYGLELDASAAVASGSNTCLAASDLIVSANCNAAPNLFATGTGRIGY 173
Query: 139 SVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
+ L Y G + E + K FD V+G+G++ +
Sbjct: 174 AFGSLGQTLAYLKAGAAWQNNRGDIVNNFEGGDLPQEKTHFDYGQVGGVIGLGVEQALTP 233
Query: 196 DISLSASYRYIPHHIHSVNNSNAK-------SDVERVDRKGNAHIASLGINMHF 242
S++ Y Y+ SV ++ N HI +G+N HF
Sbjct: 234 SWSVNVEYDYLHFGGPSVATASTAKLSPSTILPASTTSLSSNYHIGKIGLNYHF 287
>gi|86749831|ref|YP_486327.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572859|gb|ABD07416.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 243
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 71/204 (34%), Gaps = 20/204 (9%)
Query: 50 EYGIWSGNYVGLHISRL-----YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
WSG Y+G + ++ + + + + G ++G+N Q+ +VF
Sbjct: 39 AIYDWSGFYIGANGGWGTSRKSWDFYAPGALLLSEGSHDASGATAGGQVGYNWQMGSWVF 98
Query: 105 GINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
G+ A + L K +G + GY+ ++ L+Y GG
Sbjct: 99 GVEAQGNWADFKGSNVTLLGGLFDNHSKVEAFGLFTGRVGYAWNNALLYAKGGAAVVNDK 158
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + + + A +G GL+Y + S + Y ++ V +N
Sbjct: 159 YEFVRRADGLVTGTA----SETRWGASVGAGLEYGFTPNWSFAVEYNHLFLDKKDVTFTN 214
Query: 218 AKSDVERVDRKGNAHIASLGINMH 241
+ K +A I + IN
Sbjct: 215 TAVE----RIKQDADIVTARINYR 234
>gi|217977075|ref|YP_002361222.1| porin [Methylocella silvestris BL2]
gi|217502451|gb|ACK49860.1| porin [Methylocella silvestris BL2]
Length = 255
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/229 (22%), Positives = 79/229 (34%), Gaps = 26/229 (11%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTY----NSLLPNG 88
DL + A V W+G Y+G I + + NS
Sbjct: 21 AADLPSRAPPPVYVPPAPIFTWTGVYIGGQIGYAWGNGSANFGDANGNFVNFGNSGNGVI 80
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFY-------------RLKEKYFIYGDVVLK 135
G +G+N+QL FV G+ T+ L I G + +
Sbjct: 81 GGAHVGYNLQLNQFVVGLEGSVDGTSLSKTYSGTAFVPGFGVAGINLHTSADIQGSIRGR 140
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY+ D +L+Y GG A V S D+S +G GL+Y V
Sbjct: 141 VGYAWDRVLVYATGGVAFAGVKASLSTPFSYDSSST-------TKVGWTVGGGLEYAVTN 193
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVER--VDRKGNAHIASLGINMHF 242
+ S+ A YRY ++ ++ V+RK N + +G + F
Sbjct: 194 NWSIRAEYRYSNFGNATLYPASLAGVDAGPFVNRKFNINQVQVGFSYKF 242
>gi|328542837|ref|YP_004302946.1| OmpA-like transmembrane domain [polymorphum gilvum SL003B-26A1]
gi|326412583|gb|ADZ69646.1| OmpA-like transmembrane domain, putative [Polymorphum gilvum
SL003B-26A1]
Length = 223
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/235 (15%), Positives = 74/235 (31%), Gaps = 25/235 (10%)
Query: 13 VFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPL 72
V ++++ A LP+ +N WSG Y G ++ +
Sbjct: 9 VSIAVLAGASLPAFAADLPQPAQ--PVIYDNQV--SSARFDWSGFYFGGNLGWGWGQFTT 64
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDS----TFYRLKEKYF 127
+ + + G+ G+N + + + G+ + + +K
Sbjct: 65 NSALTGRFNSDASGVNGGVHAGYNHAITPNIIAGLEADFQLSDLEKRRSVAGVGVKTSSD 124
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
+ + GY+ D +IYG GG A + A + + LG
Sbjct: 125 WNSTIRGRLGYAFDRFMIYGTGGLAIADLE-----------VAAAGSKGNETAIGWTLGA 173
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G++ V +++ Y Y S + +A IA G++ F
Sbjct: 174 GIEGAVTDNVTARLEYLYQDFGRESFTLGGTRY-----RTDLDASIARFGVSYKF 223
>gi|316934026|ref|YP_004109008.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris DX-1]
gi|315601740|gb|ADU44275.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris DX-1]
Length = 246
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/240 (15%), Positives = 75/240 (31%), Gaps = 22/240 (9%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY--------E 68
++ +A+ + DL WSG Y+G +
Sbjct: 5 LLGTVGLIALGVAPAMAADLAARPYTKAPPIIPAMYDWSGFYIGANGGWGSSRNCWDYLG 64
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK----- 123
T + + +G ++G+N Q+ +VFG+ A + L+
Sbjct: 65 TTAAPFAAFGEGCHDASGGTVGGQIGYNWQVGTWVFGVEAQGNWADFKGSNASLRFTDTT 124
Query: 124 --EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
K +G + GY+ ++ L+Y GG ++ + +A
Sbjct: 125 NESKVDAFGLFTARVGYAWNNALLYVKGGAAVTSDKYTTYRTLAGTIIDDA----SETRW 180
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+G GL+Y + S + Y ++ + + K + + + IN
Sbjct: 181 GAAVGGGLEYGFTPNWSFAVEYDHLFMGGRDLTFA---PTTNVDHIKQDVDVVTARINYR 237
>gi|327193361|gb|EGE60264.1| outer membrane protein [Rhizobium etli CNPAF512]
Length = 211
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 77/228 (33%), Gaps = 29/228 (12%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+I + + A D +D EA + G W G Y+G + +
Sbjct: 13 FAIAGVSVAQAAD-----AVDQVPEAPVAQDAPVKPAGNWEGFYLGGAGTY--------N 59
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
+ + G + G+N Q V+G+ + DD + +K KY G V
Sbjct: 60 MGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRG 119
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ GY ++ L+YG G + S + +G G++ V
Sbjct: 120 RVGYDMNPFLLYGTAGLALGNIKVS-----------DGTSDESKTNYGYTVGAGVEAFVT 168
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+I+ YRY + + D R + + LGI + F
Sbjct: 169 NNITTRLEYRYTDYQSKDYD-----LDSGSFSRGYDENSVKLGIGVKF 211
>gi|190891163|ref|YP_001977705.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|190696442|gb|ACE90527.1| outer membrane protein [Rhizobium etli CIAT 652]
Length = 211
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 77/228 (33%), Gaps = 29/228 (12%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+I + + A D +D EA + G W G Y+G + +
Sbjct: 13 FAIAGVSVAQAAD-----AVDQVPEAPVAQDAPVKPAGNWEGFYLGGAGTY--------N 59
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
+ + G + G+N Q V+G+ + DD + +K KY G V
Sbjct: 60 MGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRG 119
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ GY ++ L+YG G + S + +G G++ V
Sbjct: 120 RVGYDMNPFLLYGTAGLALGNIKVS-----------DGTSDESKTAYGYTVGAGVEAFVT 168
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+I+ YRY + + D R + + LGI + F
Sbjct: 169 NNITTRLEYRYTDYQSKDYD-----LDSGSFSRGYDENSVKLGIGVKF 211
>gi|49474419|ref|YP_032461.1| hemin binding protein E [Bartonella quintana str. Toulouse]
gi|21689909|gb|AAM68132.1| hemin-binding protein E [Bartonella quintana]
gi|49239923|emb|CAF26323.1| Hemin binding protein E [Bartonella quintana str. Toulouse]
Length = 299
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 72/303 (23%), Gaps = 87/303 (28%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP-- 71
+ + + A D+ +P+ W+G Y G I
Sbjct: 10 VFAFIPASVVQAADVIVPQ-----QSEQVIPPVIASPPFSWTGFYFGGQIGGFSSKISAM 64
Query: 72 LADTINRKTYNSL----------------------LPNGLGIELGHNIQLED-FVFGINC 108
+D + N G G N++L + F+ G+
Sbjct: 65 TSDVASPYVDNLFFPDEESKNKKWVSVEKKYMPELSGFIGGGYTGANLELGNGFILGVET 124
Query: 109 HTTAAKDDST-------------------------------------------------F 119
+K T
Sbjct: 125 DILVSKRKDTKTVVFSDKSDQKITLVEGTKGETDGHTEEDSLGQLIGVSRLKEAEENSLT 184
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
K G ++ G+ V+ ++ Y GG D + +++
Sbjct: 185 VSHTLKQKWTGATRVRVGFPVERMMPYISGGVAYGQFQDIFSMSITGEDADFTTVDDTKA 244
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
LG G+D+ + + A YRY ER++ + +G+
Sbjct: 245 MIGYTLGGGVDFAMTDHFIVRAEYRYSDFGKKKFQ--------ERIELNYKTNDFRVGVA 296
Query: 240 MHF 242
F
Sbjct: 297 YKF 299
>gi|115522754|ref|YP_779665.1| porin [Rhodopseudomonas palustris BisA53]
gi|115516701|gb|ABJ04685.1| porin [Rhodopseudomonas palustris BisA53]
Length = 446
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 67/212 (31%), Gaps = 26/212 (12%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFV 103
Y W+G Y+G + T +L P+G G ++G+N Q ++V
Sbjct: 238 YAPAPVANWAGFYLGGNFGSGTARERTTATRVATEQFNLAPDGFIGGGQIGYNWQAANWV 297
Query: 104 FGINCHTTAAK-------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
FG + K V + GYSV S L YG GG+ V
Sbjct: 298 FGGEADFQGSTQRDNRTIVQGGVDSYDAKLPWLATVRGRLGYSVGSTLFYGTGGYAVGSV 357
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYRYIPHHI 210
S ++ F S G G++ + + Y Y+
Sbjct: 358 KTSIATPAFTET-------FTKTKSGWTAGAGIETPFTLFNLFGPNWTSKTEYLYVDLGS 410
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N + K H+ GIN HF
Sbjct: 411 VN----NTFASGLVTSSKVTEHVFRTGINYHF 438
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 72/243 (29%), Gaps = 34/243 (13%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE----T 69
+ + A DL + W+G Y+G++ T
Sbjct: 8 VALVGTAVSAQAADLAVKAPYLKAPIVAV---------YDWTGFYIGVNAGVGLGRDLAT 58
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQ----LEDFVFGINCHTTAAKDDSTFYRL--- 122
H + TY G ++G+N Q L V G+ L
Sbjct: 59 HNITPAAFATTYLQPQGALGGGQVGYNWQTNSFLGPLVLGLEADIQGTGMSDDRTNLFGN 118
Query: 123 ----KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+K +G + G + +L Y GGF V + E + SD +
Sbjct: 119 VAAYSQKLDWFGTARGRIGLAKGPVLSYFTGGFAYGNVKTTVTEGLASD-------SINR 171
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ +G G++ + + + Y Y+ + + + +I +G+
Sbjct: 172 TQTGWTIGSGVEAALGGNWTGKIEYLYVNLGNKD---DVLFLGTQPIRTEIRENIFRVGL 228
Query: 239 NMH 241
N
Sbjct: 229 NYR 231
>gi|299135509|ref|ZP_07028695.1| OmpA domain protein transmembrane region-containing protein [Afipia
sp. 1NLS2]
gi|298589733|gb|EFI49942.1| OmpA domain protein transmembrane region-containing protein [Afipia
sp. 1NLS2]
Length = 229
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 70/241 (29%), Gaps = 30/241 (12%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
++ + A DL W+G Y+G + ++
Sbjct: 1 LLAATVAALSSTSVFAADLAA--------RHYTKAPAYVAPIYNWTGFYIGAQVGGAFQG 52
Query: 70 HPLAD-TINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAK------DDSTFYR 121
+ T G +G N Q ++V G+ D+T
Sbjct: 53 SSGYNATAGVVGTRDDSSFIGGGVVGANYQFAPNWVVGLEGEFNGLSNNRHTFTDATANT 112
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+ K V + GY+ +IY GG + + N D + +
Sbjct: 113 VSIKNDWLASVTGRLGYTWGPGMIYAKGGVAF---------RDNGGVTSNVVALVDRNDT 163
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+G GL+YM S Y+Y +V + + + H GIN H
Sbjct: 164 GYTVGAGLEYMFAPAWSAKVEYQYYNFDHTNVAFAT-----NTASYRDDLHTVKAGINYH 218
Query: 242 F 242
F
Sbjct: 219 F 219
>gi|225853091|ref|YP_002733324.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457]
gi|256263422|ref|ZP_05465954.1| Omp31b [Brucella melitensis bv. 2 str. 63/9]
gi|260565169|ref|ZP_05835653.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. 16M]
gi|265991667|ref|ZP_06104224.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. Rev.1]
gi|265995505|ref|ZP_06108062.1| outer membrane protein 31b [Brucella melitensis bv. 3 str. Ether]
gi|225641456|gb|ACO01370.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457]
gi|260151237|gb|EEW86331.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. 16M]
gi|262766618|gb|EEZ12407.1| outer membrane protein 31b [Brucella melitensis bv. 3 str. Ether]
gi|263002451|gb|EEZ15026.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. Rev.1]
gi|263093434|gb|EEZ17484.1| Omp31b [Brucella melitensis bv. 2 str. 63/9]
gi|326409637|gb|ADZ66702.1| outer membrane protein Omp31 [Brucella melitensis M28]
gi|326539339|gb|ADZ87554.1| outer membrane protein Omp31 [Brucella melitensis M5-90]
Length = 202
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 25/189 (13%)
Query: 76 INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK-------------------- 114
+ + G++ G+N QL + V G +
Sbjct: 17 FSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLVDNGDLSDIGVAGNL 76
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ L+ K +G V + G++ + L++YG GG V S + ++
Sbjct: 77 SGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAG- 135
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ LG G++Y V + +L + Y Y S N + ++ ++ K N H
Sbjct: 136 --NSKTKAGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEENVNINMENKVNFHT 193
Query: 234 ASLGINMHF 242
LG+N F
Sbjct: 194 VRLGLNYKF 202
>gi|222085476|ref|YP_002544006.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221722924|gb|ACM26080.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 210
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 67/214 (31%), Gaps = 25/214 (11%)
Query: 29 YLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG 88
Y ++ + E WSG Y+G + + + N + G
Sbjct: 22 YAADAVEQIPQPPVAQEA-APAINNWSGFYIGG--AGDWNKGHFSRNGNGYGF------G 72
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
G+N Q V+G+ A DST L K + G V + GY + ++YG
Sbjct: 73 GEAFTGYNWQQGQIVYGVEADLGYAGIDSTRNGLTAKNGVNGSVRGRLGYDFNPFMLYGT 132
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
G S + +G G + + +++ YRY +
Sbjct: 133 AGLAIGQNKLSDDTSSD-----------SKTAVGYTVGAGAETFITNNVTARLEYRYTDY 181
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + D R + +GI + F
Sbjct: 182 GKKNFD-----LDSGNFSRGYDEQSVKVGIGVKF 210
>gi|13471933|ref|NP_103500.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14022677|dbj|BAB49286.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 220
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 65/210 (30%), Gaps = 16/210 (7%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
A + VE W+G Y G+ + + + G ++G+N Q+
Sbjct: 20 AADIVEPVAAMPFSWTGFYGGVQAGGGWNDSRWSGATFDSFNTNGSGGIFGGQIGYNYQI 79
Query: 100 EDFVFGINCHTTAAKDDSTFYR-------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
FV GI + + K G V + GY++D +LIYG G
Sbjct: 80 NQFVIGIEGDLAGSTVKGDGQCSTALGTTCETKQDYLGSVRGRLGYAIDRILIYGDAGVA 139
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ ++ G G+G +Y + + + Y S
Sbjct: 140 FTKYKIAEVDGFHQSFGG-------GSRVGWTAGLGAEYALTDHWTAGVEWNYYDFGTKS 192
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ VD + ++ IN F
Sbjct: 193 GESDTIPGFF--VDNRNTENVVVGKINYKF 220
>gi|312114480|ref|YP_004012076.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311219609|gb|ADP70977.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 288
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 41/233 (17%), Positives = 74/233 (31%), Gaps = 45/233 (19%)
Query: 54 WSGNYVGLHISRLYETHPL-----ADTINRKTYNSLLPNG---------LGIELGHNIQL 99
W+G Y G H+ + D + + G G + G+N Q
Sbjct: 45 WTGFYFGGHLGAAWTQLETRKNEYWDGYDDSDLSFATFGGKNLNDQSAFGGGQFGYNWQT 104
Query: 100 E-DFVFGINCHTTAAKDD--------------------STFYRLKEKYFIYGDVVLKAGY 138
+FV GI D + +K + YGDV + GY
Sbjct: 105 GGNFVLGIEVDIGGLGSDNERTFLATTYNDVTFSSAYSTAVVNVKSEGGFYGDVTGRLGY 164
Query: 139 SVDSLLIYGMGGFGGAY----VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ + L+Y GGF V + + + + +D + +G GL++++N
Sbjct: 165 AWGNTLLYAKGGFAWIQPELKVRTVVSIDDDPNGTYTSSHTYDDTLTGWTIGGGLEFLLN 224
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDR------KGNAHIASLGINMH 241
+ S+ Y + + + NN + LG+N
Sbjct: 225 PNWSVKVEYLHYDFELDNNNNRRWNDWDVDYNNWRLFKDSFTVDTVKLGVNYK 277
>gi|27377123|ref|NP_768652.1| hypothetical protein bll2012 [Bradyrhizobium japonicum USDA 110]
gi|27350266|dbj|BAC47277.1| bll2012 [Bradyrhizobium japonicum USDA 110]
Length = 308
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/240 (15%), Positives = 81/240 (33%), Gaps = 17/240 (7%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
++ L+ + A + + WSG Y+G + +H
Sbjct: 71 ILILTACIGALCAAAPSFGTDLAGQPVKVKAAPLPVAAPIIDWSGYYMGANGGWG-TSHN 129
Query: 72 LADTINRKTY--NSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-------FYRL 122
D + ++ +G ++G+ Q+ + V+G+ A + +
Sbjct: 130 CWDFNGITSEGCHNSTGGTVGGQIGYRWQIFNMVYGLEGQGNWADFRGSNVSTAFPTDTV 189
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
+G + GY+ +++L+YG GG S+ V S + G+ +
Sbjct: 190 GTTTDAFGLLTGHIGYAFNAVLLYGKGGAAV----TSNTYYVNSVATGTELGKNNDVRWG 245
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
VLG G + + + S Y ++ +++ A + + + +N F
Sbjct: 246 GVLGAGAEVSLTPNWSAGVEYNHLFMQRSNISFPAALGA---DRAHQDVDLITARLNYKF 302
>gi|148258633|ref|YP_001243218.1| OmpA-like transmembrane domain-containing protein [Bradyrhizobium
sp. BTAi1]
gi|146410806|gb|ABQ39312.1| OmpA-like transmembrane domain protein [Bradyrhizobium sp. BTAi1]
Length = 710
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 68/207 (32%), Gaps = 19/207 (9%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLE 100
E + W+G YVG H + +S G ++G+N QL
Sbjct: 83 EAEMKRVYDWTGFYVGGHFGYGGGRLGDDSHPKPEQGVFLPHSPTGLIGGFQVGYNRQLA 142
Query: 101 D-FVFGINCHTTAAKDDS----TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
+ V G+ + G + GY+ D + Y GGF +
Sbjct: 143 NHLVLGVEADASFTSPTDEPALAPSPFNSTVDYVGTARGRVGYAFDRWMPYVTGGFAWGH 202
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ + + + + G+G ++ V+ + + Y Y+ + +
Sbjct: 203 GHIEVND--------GSGAQLGRYQTGWTAGLGAEFAVSGNWTAKVEYDYVNLSAATYDL 254
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
+ D+ H+A +G+N HF
Sbjct: 255 --GRFDLPNARLAPGLHLAKIGLNYHF 279
>gi|300024284|ref|YP_003756895.1| porin [Hyphomicrobium denitrificans ATCC 51888]
gi|299526105|gb|ADJ24574.1| porin [Hyphomicrobium denitrificans ATCC 51888]
Length = 218
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 61/195 (31%), Gaps = 25/195 (12%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
IW G Y+G++ + + + +N Q VFG+
Sbjct: 44 IWDGAYIGINGGYGWSDARPTEPEGGFGGGQIG---------YNWQRGRVVFGLEGDFQG 94
Query: 113 AKDDS-----TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
A + + V + G++ L+Y GG A V +
Sbjct: 95 ADISGRAYTFDGDTARSDMNWFSTVRGRLGFTSGPWLLYATGGLAVADVDHRA------- 147
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
N + R + +G GL++ + + S A Y Y+ + N V
Sbjct: 148 NLEGQSFRGSDTLTGYAVGGGLEWKFSQNWSAKAEYLYLGLGDSKLTADNGDF----VRI 203
Query: 228 KGNAHIASLGINMHF 242
+ +G+N HF
Sbjct: 204 NNDVQTVRVGLNYHF 218
>gi|17986685|ref|NP_539319.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|256045237|ref|ZP_05448134.1| outer membrane protein Omp31 [Brucella melitensis bv. 1 str. Rev.1]
gi|256114189|ref|ZP_05454943.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether]
gi|17982306|gb|AAL51583.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
Length = 201
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 25/189 (13%)
Query: 76 INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK-------------------- 114
+ + G++ G+N QL + V G +
Sbjct: 16 FSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLVDNGDLSDIGVAGNL 75
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ L+ K +G V + G++ + L++YG GG V S + ++
Sbjct: 76 SGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFS--- 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ LG G++Y V + +L + Y Y S N + ++ ++ K N H
Sbjct: 133 AGNSKTKAGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEENVNINMENKVNFHT 192
Query: 234 ASLGINMHF 242
LG+N F
Sbjct: 193 VRLGLNYKF 201
>gi|91975275|ref|YP_567934.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91681731|gb|ABE38033.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 454
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 71/214 (33%), Gaps = 27/214 (12%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYE----THPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y W+G Y+G + T + S G ++G+N Q +
Sbjct: 243 YIAPPPANWAGLYIGGNFGGSATARNRTTATIGGFTEQFNLSPEGFIGGGQIGYNWQAAN 302
Query: 102 FVFGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+VFG + + +K +G + GYSV S L+Y GG+
Sbjct: 303 WVFGAEADFQGSTQKDDRTAVFGSTVAYNQKLPWFGTARARLGYSVGSTLLYATGGYAYG 362
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYRYIPH 208
V + + + ++ S + S +G G++ + + + Y Y+
Sbjct: 363 NVKTNIVTPLSNETS-------NRSRSGYAVGGGVEMPFSLFGLLGPNWTSKTEYLYVDL 415
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + K H+ GIN HF
Sbjct: 416 GSTTDVFAGGLGVSTS---KVTEHMVRTGINYHF 446
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 70/253 (27%), Gaps = 41/253 (16%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
V + + A DL + A W+G Y+G ++
Sbjct: 4 LLVGAALVGSAVSAQAADLAVRAPYVKAPVA---------AIYDWTGFYIGGNVGVGVGR 54
Query: 70 HPLADTI-----NRKTYNSLLPNGLGIELGHNIQ----LEDFVFGINCHTTAAKDDST-- 118
+ + +Y G ++G+N Q + G+ +
Sbjct: 55 NLQSHVFPAGGVANSSYLQPQGVIGGGQIGYNWQTNSVFGPLLIGVEADIQGSGMSDGRT 114
Query: 119 ----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+K + V + G + ++ Y GGF V +
Sbjct: 115 TLNTLNGVLGTVNYNQKLDWFTTVRGRIGIARGPVVSYFTGGFAAGDVKTTVT------E 168
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
G + V+G G++ + + + Y Y+ + + + +
Sbjct: 169 VGLVPFNLSGTRTGWVIGSGVEAALGGNWTGKIEYLYLDLGNRT-----DVFGTQSLRTE 223
Query: 229 GNAHIASLGINMH 241
+I +G+N
Sbjct: 224 LRENIFRVGLNYR 236
>gi|240849917|ref|YP_002971306.1| hemin binding protein A [Bartonella grahamii as4aup]
gi|240267040|gb|ACS50628.1| hemin binding protein A [Bartonella grahamii as4aup]
Length = 296
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 81/307 (26%), Gaps = 85/307 (27%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L +++ + + A D+ +P ++ A W+G Y+G +
Sbjct: 4 KYLIATSVATLISASAAQAADVMIPHEVAPAVIAAA-------PSFSWTGFYLGGQVGNF 56
Query: 67 YETHPLADTI----NRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAK----- 114
+ K N P+G GI G N+ L + + G+ A
Sbjct: 57 SSKTKVTIPGEERELFKKDNIPSPSGFMGGIYAGSNVDLGNGLILGVETDAVWADREESK 116
Query: 115 ----------------------------------DDSTFYRLKEKYFIYGDVVLKAGYS- 139
DD K G ++ G++
Sbjct: 117 KARELTLTEKNAADFNAALEKAKVELKDQQQFQKDDKVTETHSYKEKWSGATRVRIGFAA 176
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVES------------------------DNSKNAKGR 175
VD ++ Y GG A V + D +
Sbjct: 177 VDRIMPYVAGGIAYAQVQGIQSVAGKGERAKVEQKAGGDEIVPEAGAKQSIDLTGGTWAD 236
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+G G+D+ + ++ L A YRY N + + +
Sbjct: 237 DTKTMLGFTIGGGVDFAMTDNVLLRAEYRYSDFGKKKFAN-------DTREFNYKTNDFR 289
Query: 236 LGINMHF 242
+G+ F
Sbjct: 290 VGVAYKF 296
>gi|27382806|ref|NP_774335.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27355979|dbj|BAC52960.1| blr7695 [Bradyrhizobium japonicum USDA 110]
Length = 288
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 65/205 (31%), Gaps = 18/205 (8%)
Query: 52 GIWSGNYVGLHISRLYETH----PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
W+G Y+G + A +G ++G+ Q FVFG+
Sbjct: 77 YDWTGFYIGANGGWGQSHSCVDFVTALGTVASGCGDRSGGVVGGQIGYRWQTSQFVFGLE 136
Query: 108 CHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
A +T L K G + G++ +S L+Y GG +
Sbjct: 137 AQGDWADLKNTRVSLFNPTLSTTAKTDAIGLFTGQLGWAWNSALLYVKGGAAVTSNRLTI 196
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ +A D LG+G +Y + S+ Y ++ + + S
Sbjct: 197 FDNTTGIGLVSA----DNTRWGGTLGVGFEYGFTPNWSVGVEYDHLWMGHANNSFSVVDP 252
Query: 221 DVERV---DRKGNAHIASLGINMHF 242
+ V + + ++ N F
Sbjct: 253 RLAAVLNDRISQDVDMVTVRFNYRF 277
>gi|76885942|gb|ABA60112.1| pap31-like protein [Bartonella bacilliformis]
Length = 300
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 40/314 (12%), Positives = 77/314 (24%), Gaps = 93/314 (29%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
L +++ + + A D+ +P++I W+G Y+G I
Sbjct: 3 IKCLVTASVCALISASAAQAADVMIPQEIS---------PIISAPTFSWTGLYLGGQIGG 53
Query: 66 LYETHPL----ADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDST 118
L H D+ L +G G+ G NI L V G++ +
Sbjct: 54 LSGKHDFKAIGKDSEWPFANKDLKVSGFVGGLYAGSNIDLGSGLVLGVDTDIVWVDKEGK 113
Query: 119 FY-----------------------------------RLKEKYFIYGDVVLKAGYSVDSL 143
+ K G ++ G+ D +
Sbjct: 114 LFSNHRAETQDDADAFKQIFDENKIEVAKGQIKELTQNFSLKEKWAGATRVRIGFGADRI 173
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDN----------------------------------- 168
+ Y GG V ++
Sbjct: 174 MPYVSGGVAYTQVQAIGSAILKGTKDTGTEGGGGTEGGGGTEGGGGSASKAVRSEALDVL 233
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ LG G+D+ + ++ L YRY + ++
Sbjct: 234 ASGTITDEKKTLLGYTLGAGVDFAMTDNVILRTEYRYSDFGKKKF-------VKDAIETN 286
Query: 229 GNAHIASLGINMHF 242
+ +G+ F
Sbjct: 287 YKTNDFRVGVAYKF 300
>gi|319408048|emb|CBI81702.1| Hemin binding protein C [Bartonella schoenbuchensis R1]
Length = 296
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 38/305 (12%), Positives = 73/305 (23%), Gaps = 81/305 (26%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+ ++V + + A D+ + + W+G Y+G I
Sbjct: 4 KCVITASIFALVSASAAQAADM----PVQERPTTVLPQVVVAPAF-SWTGFYLGGQIGGF 58
Query: 67 YETHPLADTINR------------KTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAA 113
T N K + G+ G N+ + FV G++ +
Sbjct: 59 SSNSSSKGTYNNVPNGTKEILVDNKAFPKFSGFVGGLYAGSNVDFGNGFVLGVDTDIVWS 118
Query: 114 K-----------------------------------------------DDSTFYRLKEKY 126
+
Sbjct: 119 GDKASKSKSYEVAAKPDTPIGDFNPADGVSGGGYLGVATRAKDEGSQIAKPAKGDVTFSD 178
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR---------FD 177
G ++ G + D ++ Y GG + + S S K
Sbjct: 179 KWSGATRVRLGAAFDRVMPYVAGGVAYSQLKASVENAKASGAQKAEGTSVEKPLEGLSDS 238
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
LG G+D+ + + L A YRY ++V+ + +G
Sbjct: 239 KTMVGYTLGAGVDFAMTDTVMLRAEYRYSDFGKKKF-------VKDKVEVDLKTNDFRVG 291
Query: 238 INMHF 242
+ F
Sbjct: 292 VAYKF 296
>gi|260545348|ref|ZP_05821089.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella abortus NCTC
8038]
gi|260754712|ref|ZP_05867060.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 6 str. 870]
gi|260757935|ref|ZP_05870283.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 4 str. 292]
gi|260761758|ref|ZP_05874101.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 2 str. 86/8/59]
gi|260883735|ref|ZP_05895349.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 9 str. C68]
gi|260096755|gb|EEW80630.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella abortus NCTC
8038]
gi|260668253|gb|EEX55193.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 4 str. 292]
gi|260672190|gb|EEX59011.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 2 str. 86/8/59]
gi|260674820|gb|EEX61641.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 6 str. 870]
gi|260873263|gb|EEX80332.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 9 str. C68]
Length = 173
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 15/170 (8%)
Query: 84 LLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST----------FYRLKEKYFIYGDV 132
G+ G+N + + FV G++ T D++ + K G V
Sbjct: 8 PDGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAV 67
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
+ G ++D + Y GG V +S D ++ + G G+DY
Sbjct: 68 RARMGVAMDRWMPYIAGGVAFGNVKNSVSLT---DGIESIGVSQSKTMTGWAAGAGVDYA 124
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + YRY + + + VE K H LG+ F
Sbjct: 125 ATDNVIVRLEYRYTDYGHKDFSVVDGDLSVE-ARNKFKTHDIRLGVAYKF 173
>gi|115526777|ref|YP_783688.1| OmpA domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115520724|gb|ABJ08708.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris BisA53]
Length = 228
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 67/204 (32%), Gaps = 26/204 (12%)
Query: 46 YQDDEYGIWSGNYVGLHISRLY-ETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFV 103
Y W+G Y+G HI + +A + R + L G++ G++ Q ++V
Sbjct: 34 YAPAPIYNWTGFYIGGHIGGAFVGDDSIATGVTRNNDGTFLG---GVQGGYDYQFAPNWV 90
Query: 104 FGINCHTTAAKDDST-----FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
FGI + + Y +K G V + GY+ L+Y GG+ A
Sbjct: 91 FGIEAQYSWLDSGTDPVLVGAYSFSDKQKGLGSVTGRIGYTWGPALLYAKGGYAFADYDT 150
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+ +G GL+Y+ S Y+Y
Sbjct: 151 TV-------TLGGVGAAVSSKSDGYTVGGGLEYLFAPSWSAKVEYQYYDFGNVDF----- 198
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
K + H+ G+N F
Sbjct: 199 ----GTFSVKNDEHVVKAGLNYRF 218
>gi|146340932|ref|YP_001205980.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193738|emb|CAL77755.1| putative outer-membrane protein; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 250
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 55/185 (29%), Gaps = 13/185 (7%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS-------- 117
+ P A + G +G+N Q+++ VFG+ A
Sbjct: 63 TFFGGPNAVGFAGTQRYDINGGFAGGVIGYNWQVDNIVFGLEGDYHWADISGRSTEINLG 122
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
K +GD+ + G++ L + GG + +
Sbjct: 123 AGDTYFTKLRGFGDIKGRLGWAAGPALFFVSGGAAVGDLQHRYDAGLFG---PAFSASQS 179
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+G G +YM + S Y Y+ ++ R + H +G
Sbjct: 180 DWRWGWTIGAGAEYMFAQNWSAKVEYNYLDFGKSTLQY--TPVAANRSEWNDTVHTVKVG 237
Query: 238 INMHF 242
++ HF
Sbjct: 238 VSYHF 242
>gi|312115901|ref|YP_004013497.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311221030|gb|ADP72398.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 266
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 46/263 (17%), Positives = 81/263 (30%), Gaps = 37/263 (14%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+ V + + + + A DLY K L + IW+G YVG H
Sbjct: 2 KKILLGVASFVALSSSAFAADLY---KGSLKDAPVYEAPA------IWTGLYVGAHGGYA 52
Query: 67 YETHPLADTI----NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD-----DS 117
+++ T L +G ++G+N Q + V G+ +AA D
Sbjct: 53 WDSIDFPGTPSHANGGAPRPDLEGGFVGGQIGYNYQFDKIVVGVVADISAANLEKTERDG 112
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV------------------IDS 159
+ +G V GYS +L Y G+G +
Sbjct: 113 NYLNETTSIDKFGTVRAILGYSFGKVLPYATVGYGWTSLSYKFGCPDALITGGYGGCNTK 172
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN-A 218
+ S N FD +V G G+ Y ++ S+ Y + + + A
Sbjct: 173 PSWSPVTTPSANRTSGFDATTGGLVYGGGVKYAIDNRFSIGVEYLRFDKADETADYAAYA 232
Query: 219 KSDVERVDRKGNAHIASLGINMH 241
+ + L ++
Sbjct: 233 YFPASKTKIETETDTVKLSVDYK 255
>gi|121602865|ref|YP_989466.1| omp25/ropB family outer membrane protein [Bartonella bacilliformis
KC583]
gi|120615042|gb|ABM45643.1| outer membrane protein, omp25/ropB family [Bartonella bacilliformis
KC583]
Length = 300
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 40/314 (12%), Positives = 76/314 (24%), Gaps = 93/314 (29%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
L +++ + + A D+ +P++I W+G Y+G I
Sbjct: 3 IKCLVTASVCALISASAAQAADVMIPQEIS---------PIISAPTFSWTGLYLGGQIGG 53
Query: 66 LYETHPLA----DTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDS- 117
L H D+ L +G G+ G NI L V G++ +
Sbjct: 54 LSGKHDFKAIGKDSEWPFANKDLKVSGFVGGLYAGSNIDLGSGLVLGVDTDIVWVDKEGK 113
Query: 118 ----------------------------------TFYRLKEKYFIYGDVVLKAGYSVDSL 143
K G ++ G+ D +
Sbjct: 114 LSSNHKAETQDDADAFKQIFDENKIEVAKGQIKELTQNFSLKEKWAGATRVRIGFGADRI 173
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDN----------------------------------- 168
+ Y GG V ++
Sbjct: 174 MPYVSGGVAYTQVQAIGSAILKGTKDTGTEGGGGTEGGGGTEGGGGSASKAVRSEALDVL 233
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ LG G+D+ + ++ L YRY + ++
Sbjct: 234 ASGTITDEKKTLLGYTLGAGVDFAMTDNVILRTEYRYSDFGKKKF-------VKDAIETN 286
Query: 229 GNAHIASLGINMHF 242
+ +G+ F
Sbjct: 287 YKTNDFRVGVAYKF 300
>gi|148258469|ref|YP_001243054.1| hypothetical protein BBta_7274 [Bradyrhizobium sp. BTAi1]
gi|146410642|gb|ABQ39148.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 693
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/250 (14%), Positives = 69/250 (27%), Gaps = 37/250 (14%)
Query: 22 HSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET------------ 69
L + + + V+ W+G YVG H
Sbjct: 19 GVLTANSWASAESGRVPLP---VQASVSSIFDWTGFYVGTHFGYAAGASNWSATQADGSA 75
Query: 70 ----HPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDSTFYRLKE 124
L + G++ G+N Q + G+ + S
Sbjct: 76 PRLMGRLDFYPQYDAFKGTGSFSSGLQAGYNYQAASRLLLGVEADISFPNSVSATQTFST 135
Query: 125 KYFIY----------GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL----EKVESDNSK 170
G V + GY+ D+ L+YG GGFG ++ + +
Sbjct: 136 TLGDQASYGETVLHAGSVRGRVGYAFDNWLVYGTGGFGWSFDQFTRTQLMGSPMGGSAVP 195
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ V G G++ V + Y S++ + ++ +
Sbjct: 196 GTLEKHSLWRLGWVAGAGVELPVAPSWTAKLEYLLSEFGGQSISF---PAGAQKFEGDYA 252
Query: 231 AHIASLGINM 240
+H LG+N
Sbjct: 253 SHSIRLGLNY 262
>gi|27379811|ref|NP_771340.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27352964|dbj|BAC49965.1| blr4700 [Bradyrhizobium japonicum USDA 110]
Length = 229
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 63/216 (29%), Gaps = 34/216 (15%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
W+G Y+G+ + N + +G G+N Q
Sbjct: 27 PYTKAPVAVASVYNWTGFYLGIVGGGAW--------ENGSGDPKMKGGFVGGTAGYNWQT 78
Query: 100 EDFVFGINCHTTAAKD-------------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
+ VFG+ T A + K G V + GY+V+++L Y
Sbjct: 79 GNVVFGVEADGTWADVSASATGATVVPGFGVATATVSSKTDAMGTVRGRIGYAVNNVLFY 138
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G GG+ + S +G G++ S+ Y Y
Sbjct: 139 GTGGYAWIDNKITLSAL-------GVSVSDSKFHSGWTVGAGVEAFFAPQWSVKGEYLYR 191
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + N H +G+N HF
Sbjct: 192 SLGGETYFSGALPTGT------LNFHTVQVGVNYHF 221
>gi|146343090|ref|YP_001208138.1| hypothetical protein BRADO6285 [Bradyrhizobium sp. ORS278]
gi|146195896|emb|CAL79923.1| Putative outer membrane protein [Bradyrhizobium sp. ORS278]
Length = 267
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 78/264 (29%), Gaps = 48/264 (18%)
Query: 13 VFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPL 72
V ++ A DL + E WSG ++GLH+ + ++ +
Sbjct: 11 VVAVLIPGGSVFAADLPVKAPT-------------FAERFAWSGCHLGLHLGGAWASNSI 57
Query: 73 ADTINRKTYNSL-----------------LPNGLGIELGHNIQL-EDFVFGINCHTTAA- 113
D + N G ++G + Q V G + A
Sbjct: 58 TDPVLLVQDNGNLGGPGFTTVGTTVKTGQSGGIAGGQIGCDYQFPSSVVVGAEFSASGAA 117
Query: 114 ----------KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
+ K K D+ +AGY+VD L Y GG A S
Sbjct: 118 LNGSRTFALPDSPPDIAQAKIKTDFITDLTARAGYAVDHWLFYAKGGVAWASTKYSVTGG 177
Query: 164 VESDNSKNA---KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS---VNNSN 217
+ + A + G G+++ D S Y Y + V+ N
Sbjct: 178 FTNAGANPAIAFDFEGLSVRTGWTAGAGVEWAFAQDWSARFEYDYYDFGTRAVNMVDVLN 237
Query: 218 AKSDVERVDRKGNAHIASLGINMH 241
+ + K + +G+N H
Sbjct: 238 GNAAAGPLSFKTSVQTVKVGVNFH 261
>gi|118591879|ref|ZP_01549274.1| outer membrane protein, putative [Stappia aggregata IAM 12614]
gi|118435522|gb|EAV42168.1| outer membrane protein, putative [Stappia aggregata IAM 12614]
Length = 223
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 61/212 (28%), Gaps = 21/212 (9%)
Query: 36 LFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH 95
+ W+G YVG ++ + N G+ G+
Sbjct: 28 QSPAPAYEAVPAPQQSIDWTGLYVGGNLGWAFGQFDNKAGNNTGLGVDANGIAGGLYTGY 87
Query: 96 NIQL-EDFVFGINCHTTAAKDDSTFYR----LKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
N Q+ + V G + + + L+ K + + GY+ D L+YG GG
Sbjct: 88 NFQVTPNIVVGAEADFSLTDLEKSKSNGGLTLRSKSDWNSNFRGRVGYAFDRYLVYGAGG 147
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
A + S + LG G + + +++ Y Y
Sbjct: 148 LAIADLEVSGNGDTD-----------SKTALGWTLGAGGEAAITNNVTAKLEYVYQDFGE 196
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N + V N +GI F
Sbjct: 197 QDFNLNG-----TGVSSDFNNSQVRMGIGYKF 223
>gi|39933882|ref|NP_946158.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|192289301|ref|YP_001989906.1| porin [Rhodopseudomonas palustris TIE-1]
gi|39647729|emb|CAE26249.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|192283050|gb|ACE99430.1| porin [Rhodopseudomonas palustris TIE-1]
Length = 449
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 66/217 (30%), Gaps = 28/217 (12%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL----LPNGLGIELGHNIQ 98
N Y W+G Y+G + + T+ ++ G ++G+N Q
Sbjct: 236 NGTYITPPPANWAGLYIGGNFGGATGRDRSSLTLGGGQTDTFNLAPDGFIGGGQIGYNWQ 295
Query: 99 LEDFVFGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
++VFG+ + + K +G + GYS+ S L YG G+
Sbjct: 296 ASNWVFGVEADFQGSTQKDQRASVLGPRAYYDAKLPWFGTARGRIGYSLGSTLFYGTAGY 355
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV------NYDISLSASYRY 205
+ + + F G G++ + + Y Y
Sbjct: 356 AYGNIKSDIVSSI-------GNYSFKTTKGGWAAGAGIETPFQLFGLLGPNWTSKTEYLY 408
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + K HI GIN HF
Sbjct: 409 VDLGSTTDVFGGTGINTT----KVTEHILRTGINYHF 441
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 71/251 (28%), Gaps = 36/251 (14%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+F V L+ + A DL + A W+G Y+G ++
Sbjct: 2 KRIFAGVVLAGTAAVSAQAADLAVKAPYLKAPVAAV---------YDWTGFYIGANVGVG 52
Query: 67 YE-----THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV----FGINCHTTAAKDDS 117
TY G ++G+N QL F+ G+ +
Sbjct: 53 LGRNLQTHAYPGGASLNTTYLQPQGVIGGGQIGYNWQLGSFLGPMLLGLEADIQGSGASD 112
Query: 118 TFY-------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ +K +G V + G + Y GG+ V +
Sbjct: 113 GYTSLNGLATNYNQKLDWFGTVRGRVGLVRGPAVAYFTGGYAVGSVKTTVT------EGG 166
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
S V+G G++ + + + Y Y+ + N + + +
Sbjct: 167 LVAFDNSKTRSGWVIGSGVEAALGGNWTGKIEYLYLDLGNQTDFFGN-----QSLRTEVR 221
Query: 231 AHIASLGINMH 241
I G+N
Sbjct: 222 ESIFRAGLNYR 232
>gi|218461202|ref|ZP_03501293.1| outer membrane protein [Rhizobium etli Kim 5]
gi|218658675|ref|ZP_03514605.1| outer membrane protein [Rhizobium etli IE4771]
Length = 207
Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 69/234 (29%), Gaps = 29/234 (12%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L +V + A D+ + WSG Y G+ +
Sbjct: 3 LTIATTFLALVATTAFAADVV---------QEAPTAPLAAAPVFTWSGPYFGIDGGAAWL 53
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ G G+N Q ++FV GI + ++ +
Sbjct: 54 NGDFS-AGGASASEDFNGGVFGGFAGYNFQFDNFVVGIEGNLEHNWNEEDALGAEVGTDW 112
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G V + GY+ D LIYG G+ + + +G G
Sbjct: 113 AGAVRGRVGYAFDKALIYGAAGWAATR----------GYVDAPGFDKETETFNGYTVGAG 162
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+D+ + +I YRY + D+ VD + H GI + F
Sbjct: 163 VDFAITNNIFARGEYRYNDYGEQ---------DILGVDVDLDQHELKFGIGVKF 207
>gi|39937872|ref|NP_950148.1| hypothetical protein RPA4814 [Rhodopseudomonas palustris CGA009]
gi|39651732|emb|CAE30254.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 561
Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 79/259 (30%), Gaps = 40/259 (15%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
+V ++ + S A +PR L A W+G Y G H+ + +
Sbjct: 5 LVTVATLATVISPAAAADMPRFPPLMPVA--------PVSWNWTGLYWGAHVGGSFGSSS 56
Query: 72 LADTINRKTYNSL---LPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTF-------- 119
+D Y GI++G+N Q +++ G+ ++ T
Sbjct: 57 FSDPAGPGLYGGSVRSPAALAGIQVGYNYQPNANWLIGVEADLSSMNAKGTNTCMASSGL 116
Query: 120 ---YRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + +AG+ L+Y GG +
Sbjct: 117 FISSNCRVRQDALATLTGRAGFVTGPGGRTLLYAKGGAAYLSERLD----IAVGYPLGNL 172
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV-------- 225
+ +G G++ + S+ Y Y + +++ V V
Sbjct: 173 TAANDGRWGWTVGAGIERALAPAWSVKLEYNYADFGSRDMATPDSERLVPGVGSFATPQG 232
Query: 226 --DRKGNAHIASLGINMHF 242
+ + H +G+N+ F
Sbjct: 233 TSRVEQDLHAVKVGLNLKF 251
>gi|91977226|ref|YP_569885.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91683682|gb|ABE39984.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 241
Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 66/213 (30%), Gaps = 19/213 (8%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHP----LADTINRKTYNSLLPNGLGIELGH 95
WSG Y+G + + + + G ++G+
Sbjct: 28 PYAKAPPIIAAVYDWSGFYIGANGGWGTSRKSWDFYTVGGLAAEGSHDASGATAGGQIGY 87
Query: 96 NIQLEDFVFGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGM 148
N Q +VFG+ A + L + + +G + GY+ ++ L+Y
Sbjct: 88 NWQAGSWVFGLEAQGNWADFKGSNVTLLGGLFDNQSRIDAFGLFTGRVGYAWNNALLYAK 147
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
GG + + + G +G G +Y + S + Y ++
Sbjct: 148 GGAAVVNDKYDFIRRADG----FVTGTASETRWGAAVGAGFEYGFTPNWSFAVEYDHLFL 203
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
V +N + K +A I + IN
Sbjct: 204 DKKDVTFTNTAVE----RIKQDADIVTARINYR 232
>gi|327189607|gb|EGE56759.1| outer membrane protein [Rhizobium etli CNPAF512]
Length = 207
Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 36/222 (16%), Positives = 62/222 (27%), Gaps = 20/222 (9%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKT 80
+ + + WSG Y G+ + +
Sbjct: 6 ATAFLALVATTAFAADVVQEAPTAPVAAAPVFTWSGPYFGIDGGAGWLNGDFS-AGGASA 64
Query: 81 YNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV 140
G G+N Q ++ V GI + ++ G V + GY+
Sbjct: 65 DEDFNGGVFGAFAGYNFQFDNIVVGIEGNIEHNWNEEDALGADVGTDWAGAVRGRVGYAF 124
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D LIYG G+ + + +G G+D+ + +I
Sbjct: 125 DKALIYGAAGWAATR----------GYVDAPGFDKETETFNGYTVGAGVDFAITNNIFAR 174
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YRY + D+ VD + H GI + F
Sbjct: 175 GEYRYNDYGEK---------DILGVDVDLDQHELKFGIGVKF 207
>gi|241518381|ref|YP_002979009.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862794|gb|ACS60458.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 207
Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 60/200 (30%), Gaps = 20/200 (10%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF 102
+ WSG Y+G+ + + G +G+N Q ++
Sbjct: 28 DAPVAAAPAFTWSGPYLGIDGGAGWLNGDFS-AGGASASEDFNGGIFGGFVGYNFQFDNI 86
Query: 103 VFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
V GI + ++ G V + GY+ D LIYG G
Sbjct: 87 VVGIEGNLEHNWNEEEALGADVGTDWTGAVRGRVGYAFDKALIYGAAG----------WT 136
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ + +G GLD+ + +I YRY DV
Sbjct: 137 ATRGYVDLPGLDKETETFNGYTVGAGLDFAITNNIFARGEYRYNDFGEK---------DV 187
Query: 223 ERVDRKGNAHIASLGINMHF 242
VD + H GI + F
Sbjct: 188 LGVDVDLDQHELKFGIGVKF 207
>gi|154246284|ref|YP_001417242.1| porin [Xanthobacter autotrophicus Py2]
gi|154160369|gb|ABS67585.1| porin [Xanthobacter autotrophicus Py2]
Length = 232
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 72/208 (34%), Gaps = 30/208 (14%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRK------TYNSLLPNGLGIELGHNIQL-EDFV 103
W+G Y+G ++ + + T + + G++ G+N Q + V
Sbjct: 39 TFSWTGFYIGGNVGWGWADNTYDVTPFGSLIGYSYSPGTGNGFIGGLQTGYNYQFANNVV 98
Query: 104 FGINCHTTAAKDDS---------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
G+ + S T + + +G + + GY +D L Y GG A
Sbjct: 99 IGVEADFDWSDIGSSSLVVGGPFTGGAISQNIDYFGTIRARLGYGIDRFLPYITGGAAWA 158
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
S ++ +G G++Y + + ++ A Y Y+ + ++ N
Sbjct: 159 KQNFSDFYGNT----------YNDTKWGWTVGAGVEYAITNNWTVKAEYLYLGFNKNTTN 208
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S N A LG+N F
Sbjct: 209 DYFGDSY----SVGSNISTAKLGVNYKF 232
>gi|217977073|ref|YP_002361220.1| porin [Methylocella silvestris BL2]
gi|217502449|gb|ACK49858.1| porin [Methylocella silvestris BL2]
Length = 239
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 74/213 (34%), Gaps = 16/213 (7%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS----LLPNGLGIEL 93
+ Y WSG Y+G I + + L+ ++ G +
Sbjct: 25 PYGQESGGYAPAPIFTWSGLYLGGQIGYGWANNALSGWGPFFVFSGASYNPSGVLGGAHV 84
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFY----RLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
G+N+Q V G+ A D T+ + + G + + G++VD L Y G
Sbjct: 85 GYNLQFNQIVLGLEGDVEATGVDKTYAFGPTVYTTQIPVQGSIRARFGFAVDRALFYVTG 144
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G A V + + + + +G GL+Y + + S+ A YRY
Sbjct: 145 GAAFASVTNQYQSYL-------GYNSLNRSFAGWTIGGGLEYALTNNWSVRAEYRYSDFG 197
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + V R + A +G + F
Sbjct: 198 T-ATDYTFTAGPGGNVARHLTENAARVGFSYKF 229
>gi|209548691|ref|YP_002280608.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209534447|gb|ACI54382.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 211
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 69/205 (33%), Gaps = 24/205 (11%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
EA E G W G Y+G + + + + G + G+N
Sbjct: 31 PEAPVAQEAPVKPAGSWEGFYLGGAGTY--------NMGDFGSDRHTYGFGGQVFTGYNW 82
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
Q V+G+ + DD + +K KY G V + GY ++ L+YG G V
Sbjct: 83 QQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNVK 142
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S + +G G++ V +I+ YRY + +
Sbjct: 143 VS-----------DGTSDESKTNYGYTVGAGVEAFVTNNITTRLEYRYTDYQSKDYD--- 188
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
D R + + LGI + F
Sbjct: 189 --LDSGSFSRGYDENSVKLGIGVKF 211
>gi|116251355|ref|YP_767193.1| ropB outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115256003|emb|CAK07084.1| putative ropB outer membrane protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|220979413|gb|ACL97988.1| outer membrane protein B [Rhizobium leguminosarum bv. viciae]
Length = 211
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 69/205 (33%), Gaps = 24/205 (11%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
EA E G W G Y+G + + + + G + G+N
Sbjct: 31 PEAPVAQEAPVKPAGNWEGFYLGGAGTY--------NMGDFGSDRHTYGFGGQVFTGYNW 82
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
Q V+G+ + DD + +K KY G V + GY ++ L+YG G V
Sbjct: 83 QQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLAIGDVK 142
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S + +G G++ V +I+ YRY + +
Sbjct: 143 VS-----------DDTSDESKTNFGYTVGAGVEAFVTNNITTRLEYRYTDYQSKDYD--- 188
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
D R + + LGI + F
Sbjct: 189 --LDSGSFSRGYDENSVKLGIGVKF 211
>gi|92115870|ref|YP_575599.1| putative outer membrane protein [Nitrobacter hamburgensis X14]
gi|91798764|gb|ABE61139.1| putative outer membrane protein [Nitrobacter hamburgensis X14]
Length = 452
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 68/223 (30%), Gaps = 34/223 (15%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS-----LLPNGLGIELGHNI 97
N Y W+G Y+G ++ T ++ G++ G+N
Sbjct: 233 NSTYAPVATANWNGFYLGGNVGSGTGRDRTTVTNLATGESAAFNLAPDGFIGGVQAGYNW 292
Query: 98 QLEDFVFGINCHTTAAKDD----------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
Q + V+G+ + + K G V + GY+V L Y
Sbjct: 293 QAGNIVYGLETDFQGSTMEDNKTCIGCEPGASLNFNAKLQWLGTVRGRLGYAVGPSLFYA 352
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSA 201
GGF V + E F + +G G++ + + +
Sbjct: 353 TGGFAYGNVKTAINEVN-----------FSDTRTGWTVGGGIETPFTLFGLFGPNWTSTT 401
Query: 202 SYRYIPHHIHS--VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y Y+ + +N + + HI G+N HF
Sbjct: 402 EYLYVDLGKSTNGFTLANTTGEPGALQTGVQEHIFRTGLNYHF 444
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/231 (16%), Positives = 67/231 (29%), Gaps = 24/231 (10%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET----HPLADTINRK 79
LA + DL Y W+G Y+G++ + D
Sbjct: 10 LAGTAMSAQAADLAPRPYTKAPVMAPVY-DWTGFYLGVNAGLGLGRDRTVNDFGDGTGNS 68
Query: 80 TYNSLLPNGLGIELGHNIQ----LEDFVFGINCHTTAAKDDSTFYRLKE-----KYFIYG 130
TY L G ++G+N Q L V G+ A + K +G
Sbjct: 69 TYLQPLGAIGGGQIGYNWQTNSFLGPLVLGVEADIQGADMTDNRTNINGVQYNQKLDWFG 128
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ G L Y GG+ V + F G+ S G G++
Sbjct: 129 TARGRIGLVNGPTLTYLTGGYAYGNV-------STRGVADGVPFAFSGNRSGWTWGSGVE 181
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + + Y Y+ + + + + +I G+N
Sbjct: 182 AALGGNWTGKIEYLYVDLGNRTDVFDGG---AQALHSELRENIFRAGLNYR 229
>gi|75674443|ref|YP_316864.1| outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74419313|gb|ABA03512.1| possible outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 241
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 80/235 (34%), Gaps = 30/235 (12%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L V FL + + A DL PR Y W+G Y+G HI +
Sbjct: 23 LASVAFLGMAAIVPAQAADL-APRPYTKAP------PYVPAPIYNWTGFYLGGHIGGAFG 75
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYRLKEKYF 127
N G G ++G++ Q ++VFGI + + S F
Sbjct: 76 GPGNVLAPGFFNNNDGAFMG-GGQVGYDTQFSPNWVFGIEANYSFLDTGSFFANRG---- 130
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G V + GY+ L+Y GG+G A ++ +G +G
Sbjct: 131 -LGSVTARLGYTWGPALLYVKGGYGWADSRFTN------------GFAGNGGRDGYTVGG 177
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+Y+ + S Y+Y + + + + H +G+N F
Sbjct: 178 GLEYLFTQNWSGKVEYQYYDLGNVNFFGPLGGIG----NFRNDQHTVKVGLNYRF 228
>gi|312115943|ref|YP_004013539.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311221072|gb|ADP72440.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 291
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 87/269 (32%), Gaps = 49/269 (18%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH------- 70
+ + A D+Y + +A V W+G YVG H+ +
Sbjct: 17 AIIGSASAADIYGGGGYGGYKDAPIIVAAPA-----WTGFYVGGHLGAAWTNLETRRNTY 71
Query: 71 ------PLADTINRKTYNSLLPNGLG-------IELGHNIQLE-DFVFGINCHTTAAKDD 116
P Y++ NGLG + G+N Q +FV GI + D
Sbjct: 72 WDRDPLPTGVAAAPYDYSTFGGNGLGTTGAFGGGQFGYNWQTGGNFVLGIEVDVGGLQGD 131
Query: 117 S--------------------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ +K + IYGDV + GY+ + L+Y GGF
Sbjct: 132 NERTFAAATYDGPALDAIDHIAVVNVKSQGGIYGDVTGRLGYAWGNTLLYLKGGFAWLAT 191
Query: 157 IDSSLEKVESDNSKNAKG--RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ + + FD + G GL+Y N + ++ Y + + N
Sbjct: 192 DLKVRAAITDIDGETDYYNRSFDNTLTGWTAGGGLEYQFNPNWTMKVEYLHFDFSLDDNN 251
Query: 215 NS-NAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + A LG N F
Sbjct: 252 WRWDEGNNWKIFKNDVTADTVKLGFNYRF 280
>gi|319408782|emb|CBI82439.1| Hemin binding protein c [Bartonella schoenbuchensis R1]
Length = 275
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 71/286 (24%), Gaps = 64/286 (22%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L ++V + + A + + + W+G Y G I
Sbjct: 4 KYLITASIFTLVASSVAQAESGRISQ-----ESMSVVLPNVVAPSFSWTGFYFGGQIGGF 58
Query: 67 YETHPLADTINRKTY-----------NSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK 114
L + L G+ G N L + V G++ +
Sbjct: 59 SSKTDLNLNLKGVGSTKLSSIEKDLLPKLSGFMGGLYAGANFDLNNSLVLGVDTDVIWSD 118
Query: 115 DDST--------------------------------------FYRLKEKYFIYGDVVLKA 136
T K G ++
Sbjct: 119 KKDTKVIRHSGYKTKDGGHGVQRQHHLQEAVSSDELLEKFIVTVSHTLKQKWAGATRMRV 178
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
G++VD ++ Y GG + D L K G G+D+ + D
Sbjct: 179 GFAVDHIMPYIAGGVAYTQLQDILLVSTGIKKDKIV--DETKAMIGYTFGGGIDFAMMND 236
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L A YR+ ++ + + +G++ F
Sbjct: 237 LILRAEYRFSNFGKKKF-------IKDKFEIDYKTNDFRVGVSYKF 275
>gi|192293657|ref|YP_001994262.1| hypothetical protein Rpal_5301 [Rhodopseudomonas palustris TIE-1]
gi|192287406|gb|ACF03787.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 561
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 32/224 (14%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL---LPNGLGIELGHNIQLE-DF 102
W+G Y G H+ + + +D Y GI++G+N Q ++
Sbjct: 32 VAPVSWNWTGLYWGAHVGGSFGSSSFSDPAGPALYGGSVRSPAALAGIQIGYNYQPNANW 91
Query: 103 VFGINCHTTAAKDDSTF-----------YRLKEKYFIYGDVVLKAGYSVD---SLLIYGM 148
+ G+ ++ T + + + +AG+ L+Y
Sbjct: 92 LIGVEADLSSMNAKGTNTCMASSGLFISSNCRVRQDALATLTGRAGFVAGPGGRTLLYAK 151
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
GG + + +G G++ + S+ Y Y
Sbjct: 152 GGAAFLSERLD----IAVGYPLGNSTDVNDGRWGWTVGAGIERALAPAWSVKLEYNYADF 207
Query: 209 HIHSVNNSNAKSDVERV----------DRKGNAHIASLGINMHF 242
+ +++ V V + + H +G+N+ F
Sbjct: 208 GSRDMATPDSERLVPGVGSFATPQGRSRVEQDLHAVKVGLNLKF 251
>gi|316932343|ref|YP_004107325.1| porin [Rhodopseudomonas palustris DX-1]
gi|315600057|gb|ADU42592.1| porin [Rhodopseudomonas palustris DX-1]
Length = 448
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 65/216 (30%), Gaps = 27/216 (12%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN---SLLPNGLGIELGHNIQL 99
N Y W+G Y+G + + TI T + G ++G+N Q
Sbjct: 236 NGMYVAPPPANWAGLYIGGNFGGATARDRSSVTIAGVTDAFNLAPDGFFGGGQIGYNWQA 295
Query: 100 EDFVFGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
++VFG+ + + K +G + GYS+ S L YG G+
Sbjct: 296 VNWVFGVEADFQGSTLKDQRAAVLGPAVFYDAKLPWFGTARGRIGYSLGSTLFYGTAGYA 355
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV------NYDISLSASYRYI 206
+ + + F G G++ + + Y Y+
Sbjct: 356 YGNIKTDIVSAI-------GNYSFKTTKGGWAAGAGIETPFQLFGLLGPNWTSKTEYLYV 408
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + K H GIN HF
Sbjct: 409 DLGSTTDAFGATGINTT----KVTQHTLRTGINYHF 440
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/251 (14%), Positives = 67/251 (26%), Gaps = 36/251 (14%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+ V L+ + A DL + A W+G Y+G ++
Sbjct: 2 KRILAGVVLAGTAAVSAQAADLAVKAPYMKAPVAAV---------YDWTGFYIGANVGVG 52
Query: 67 YE-----THPLADTINRKTYNSLLPNGLGIELGHNIQLE----DFVFGINCHT------- 110
TY G ++G+N Q + G+
Sbjct: 53 LGRDLQTHSYPGAGTLNSTYLQPQGAIGGGQIGYNWQFGSMFGPMLIGVEADIQGSGMSD 112
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ +K +G V + G Y GG+ V +
Sbjct: 113 GYTSLNGLATNYNQKLDWFGTVRGRVGLVRGPAFGYFTGGYAVGNVKTTVT------EGG 166
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
S V+G G++ + + S Y Y+ + N + + +
Sbjct: 167 LVAFDNSKTRSGWVIGSGVEAALGGNWSGKIEYLYLDLGNQTDFFGN-----QSLRTEAR 221
Query: 231 AHIASLGINMH 241
I +G+N
Sbjct: 222 ESIFRVGLNYR 232
>gi|146340935|ref|YP_001205983.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193741|emb|CAL77758.1| putative outer-membrane protein; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 242
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/236 (16%), Positives = 66/236 (27%), Gaps = 13/236 (5%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
L ++ DL WSG Y+G++ +
Sbjct: 4 LLVITTALVGIATATSASAADLAARPYTKAPPAIVAINDWSGFYLGINGGYGSSRNCWTL 63
Query: 75 TINRK-TYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF-------YRLKEKY 126
++ +G + G+ Q+ VFG+ A R + K
Sbjct: 64 VNGPAEGCHNATGGTVGGQFGYRWQMGQVVFGLEAQGNWADLTGNNVTPVFAPDRNRTKL 123
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
+G + GYS L+Y GG S H +G
Sbjct: 124 TAFGLFTGQIGYSFGDTLLYAKGGAAVTDTRYEIF----SGVINTVLAATTVHKWGASVG 179
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G++Y S+ Y ++ +V A + K + + + IN F
Sbjct: 180 AGVEYAFAPSWSVGFEYDHLFMGNTNVPFQGAVF-AQTDRIKQDVDLFTARINYRF 234
>gi|39933549|ref|NP_945825.1| OmpA-like transmembrane domain-containing protein [Rhodopseudomonas
palustris CGA009]
gi|39647395|emb|CAE25916.1| OmpA-like transmembrane domain [Rhodopseudomonas palustris CGA009]
Length = 736
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 63/207 (30%), Gaps = 27/207 (13%)
Query: 49 DEYGIWSGNYVGLHISR--LYETHPLADTIN-RKTYNSLLPNGLGIELGHNIQLE-DFVF 104
D WSG YVG H + L D + + N G + G+N + +
Sbjct: 112 DPAYDWSGFYVGAHAGYVRGHAGATLQDATSVAQNSNGAGGITAGAQAGYNFVTGSNLLL 171
Query: 105 GINCHTTA----------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
G+ + ++ D+ + YG V + G L Y GG
Sbjct: 172 GVEADISFPSYLPQNAVLSEFDNGTANTLQHLDYYGTVRARLGVIAGRWLGYVTGGLAFE 231
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ + V GR G G++Y + S Y Y + +V+
Sbjct: 232 HERYLTDPDV---------GRVMNARIGWAAGAGVEYGFTPNWSARVEYLYSQYQNATVD 282
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMH 241
S + N +G+N
Sbjct: 283 LPTGASYATSL----NLQTVRVGVNRK 305
>gi|121602037|ref|YP_989465.1| omp25/ropB family outer membrane protein [Bartonella bacilliformis
KC583]
gi|120614214|gb|ABM44815.1| outer membrane protein, omp25/ropB family [Bartonella bacilliformis
KC583]
Length = 284
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 88/283 (31%), Gaps = 65/283 (22%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+++ + A D+ + K + EA + W+G Y+G IS +
Sbjct: 12 ITLGSSSVVNAADVVVINKTE--EEAPASSSVFTPADLSWTGVYLGGQISGFSSKVDIDR 69
Query: 75 TINRKTYN-------SLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDS--------- 117
+ + + G+ +G NI L + F+ G+ +
Sbjct: 70 YSDNTWSSVEKSLLPEISGFSGGLYVGSNIDLGEGFILGVETDALWSNTGDKKTLPTKKV 129
Query: 118 --------------------------------------TFYRLKEKYFIYGDVVLKAGYS 139
+ G + G++
Sbjct: 130 GAAHRLEAAERNREDEVVQERRVAAANNSAKAPEANVRMTGEYALRQQWIGATRARVGFA 189
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
V+ + Y GG + +L + ++N++N++ + + +G GLD+ V+ +I L
Sbjct: 190 VERFMPYVTGGLAYGQLRGVNLLALATNNTENSE-KEEKLMVGYAVGAGLDFAVSSNIFL 248
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YR+ N E+++ + +G+ F
Sbjct: 249 RTEYRFSDLGKKKFAN-------EKIEVNYKINDFRVGVAYKF 284
>gi|241203970|ref|YP_002975066.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240857860|gb|ACS55527.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 211
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 69/205 (33%), Gaps = 24/205 (11%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
EA + G W G Y+G + + + + G + G+N
Sbjct: 31 PEAPVAQDAPVKPAGNWEGFYLGGAGTY--------NMGDFGSDRHTYGFGGQVFTGYNW 82
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
Q V+G+ + DD + +K KY G V + GY ++ L+YG G V
Sbjct: 83 QQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLAIGDVK 142
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S + +G G++ V +I+ YRY + +
Sbjct: 143 VS-----------DDTSDESKTNFGYTVGAGVEAFVTNNITTRLEYRYTDYQSKDYD--- 188
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
D R + + LGI + F
Sbjct: 189 --LDSGSFSRGYDENSVKLGIGVKF 211
>gi|39933934|ref|NP_946210.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39647781|emb|CAE26301.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 244
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 66/207 (31%), Gaps = 27/207 (13%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVF 104
Y W+G Y+G HI + T + N G++ G++ Q ++V
Sbjct: 45 YAPAPVYNWTGFYIGGHIGGAFSGDNSIGTGVTASDNGK--FLGGVQAGYDWQFAPNWVL 102
Query: 105 GINCHTTAA---------KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
G+ + + + V + GY+ L+Y GG+ A
Sbjct: 103 GVEGQYSWLSGTNSSVSWGAPGAVFTYSDNQRGLASVTGRLGYTWGPALLYVKGGWAYA- 161
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ S N D +G GL+Y+ + S Y+Y ++
Sbjct: 162 ------DYSSSLTFNNVGVAVDSKTDGYTVGGGLEYLFAPNWSGKIEYQYYDFGNVTL-- 213
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
K + H+ G+N F
Sbjct: 214 ------APGFTAKNDEHVVKAGLNYRF 234
>gi|158425350|ref|YP_001526642.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
gi|158332239|dbj|BAF89724.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
Length = 233
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 64/200 (32%), Gaps = 19/200 (9%)
Query: 54 WSGNYVGLHISRLYETH--PLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHT 110
W+G Y+G + + + + G +LG+N Q + V G+
Sbjct: 42 WTGFYIGANAGFGGDKYNYDFGAPGFGSATANSSGFFAGGQLGYNYQFANNVVLGLETDI 101
Query: 111 TAAK--------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
+ + L +G V + GY+ D L Y GGF
Sbjct: 102 QWSGIEGDTTLASGGSVANLNSSLDYFGTVRARVGYAFDRFLPYITGGFAYGESKT---S 158
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ G G + LG G++Y + + Y Y+ +++SN
Sbjct: 159 ITTITPTTLTFGEGSGTKTGWTLGGGVEYAFTNNWTFKTEYLYVD-----LDDSNYGVGA 213
Query: 223 ERVDRKGNAHIASLGINMHF 242
V+ H GIN F
Sbjct: 214 GAVNVDNKFHTVKAGINYKF 233
>gi|296445958|ref|ZP_06887908.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
gi|296256476|gb|EFH03553.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
Length = 275
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 76/243 (31%), Gaps = 33/243 (13%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET------------HPLADTINRKT 80
DL ++ + +WSG YVGL+ ++ + + +
Sbjct: 20 AADLPSKKMAPMLPPPPPPPLWSGFYVGLNAGYTWDERGNVLVNSPANIWAVGASGSGAL 79
Query: 81 YNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKE-------------KY 126
S G ++G+N Q FV G+ ++ + +
Sbjct: 80 ATSNDGFIGGGQIGYNYQFGQTFVVGVEADIQGVGGSNSSATVGNFVTPVSSAITASKQL 139
Query: 127 FIYGDVVLKAGYSVDSLLI-YGMGGFGGAYVIDSSLEKVESDNSKNAKG--RFDGHGSSV 183
G V +AGY + L+ YG GG ++ N F
Sbjct: 140 DYLGTVRGRAGYLISPTLLLYGTGGVAYGQANLNATVTQTGLNGATGSATVGFSDTRVGW 199
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV----ERVDRKGNAHIASLGIN 239
G G++++ S A Y Y S +N+ A V V H+ G+N
Sbjct: 200 TAGGGVEWLFMPQWSAKAEYLYYDLGRASASNTLAFQGVNVGATTVSSSFKGHVVRAGVN 259
Query: 240 MHF 242
HF
Sbjct: 260 YHF 262
>gi|91975321|ref|YP_567980.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91681777|gb|ABE38079.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 242
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 62/211 (29%), Gaps = 24/211 (11%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDF 102
V W+G Y+G HI + T NS G++ G++ Q +
Sbjct: 34 VYAPPVPIYNWTGFYIGGHIGGAFAGDNSI--GTGVTANSDGKFLGGVQAGYDWQFAPSW 91
Query: 103 VFGINCHTTAAKDD-----------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
V G+ + Y + V + GY+ L+Y GG+
Sbjct: 92 VLGVEGQYSWLSGSNDAVAFTVVGQPGTYTFSDNQRGLASVTGRLGYTWGPALLYVKGGW 151
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
A S + +G GL+Y+ + S Y+Y
Sbjct: 152 AYADYK--SSLTFTAPGGAAVGVSSTSSQDGYTVGAGLEYLFAQNWSGKIEYQYYDFGNV 209
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ K + H+ G+N F
Sbjct: 210 DL--------GAGFTAKNDQHVVKAGLNYRF 232
>gi|154246410|ref|YP_001417368.1| porin [Xanthobacter autotrophicus Py2]
gi|154160495|gb|ABS67711.1| porin [Xanthobacter autotrophicus Py2]
Length = 258
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/226 (13%), Positives = 58/226 (25%), Gaps = 38/226 (16%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSL--------LPNGLGIELGHNIQL-ED 101
W+G Y+G ++ + + + Y G ++G+N Q +
Sbjct: 37 VFSWTGFYIGANVGYGGDKFTFDEVESYNGYPYYATSTSLNSSGFFAGGQIGYNYQFANN 96
Query: 102 FVFGINCHTTAAKDDST--------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
V G + + +G + + GY+ D L Y
Sbjct: 97 VVLGAETDLQWSGIEGKADYSSVYLYGGYPYTSSFGASVDYFGTIRARIGYAFDRFLPYI 156
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GG S + G +G G++Y + + + Y Y+
Sbjct: 157 TGGAAYGKTKVSGSYY----DYSVGGFSASGTNWGWTVGGGVEYAITNNWTFKTEYLYVD 212
Query: 208 HHIHSVNNSNAKS-----------DVERVDRKGNAHIASLGINMHF 242
++ H G+N F
Sbjct: 213 LGSTDYTYASGSGPEAMIALDRGYSNTTGSVDTKFHTLKAGVNYKF 258
>gi|86747693|ref|YP_484189.1| OmpA-like transmembrane domain-containing protein [Rhodopseudomonas
palustris HaA2]
gi|86570721|gb|ABD05278.1| OmpA-like transmembrane domain [Rhodopseudomonas palustris HaA2]
Length = 661
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 60/203 (29%), Gaps = 27/203 (13%)
Query: 53 IWSGNYVGLHISRLYETHPL---ADTINRKTYNSLLPNGLGIELGHNI-QLEDFVFGINC 108
WSG YVG H + T + G + G+NI +FG+
Sbjct: 44 DWSGFYVGAHAGYVRGHADARLQDPTFAASQSSGSGGVTAGAQAGYNILTRAGVLFGVEA 103
Query: 109 HTTA----------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ ++ D+ ++ YG + + G + L Y GG +
Sbjct: 104 DISFPSYLPANAVLSEFDNATSTAQQHIDFYGTLRARLGVAAGRWLGYVTGGLAYEHERY 163
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+ + G+ G GL+Y + S Y Y SV
Sbjct: 164 LT---------EPGAGKVLNGRIGWAAGAGLEYGFTPNWSARIEYLYSDFGNASVGLPTG 214
Query: 219 KSDVERVDRKGNAHIASLGINMH 241
R D N +G+N
Sbjct: 215 ----ARYDTAMNLQTVRIGVNRR 233
>gi|75677026|ref|YP_319447.1| outer membrane autotransporter barrel [Nitrobacter winogradskyi
Nb-255]
gi|74421896|gb|ABA06095.1| outer membrane autotransporter barrel [Nitrobacter winogradskyi
Nb-255]
Length = 652
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 65/221 (29%), Gaps = 22/221 (9%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADT-INRKTYNSLLPNGLGIELGHNIQLEDF 102
W+G Y+G L + G ++G++ Q +
Sbjct: 422 APAMGVAPYNWTGFYIGASTGVLNGRTDWSFPGFGTGANPRFAGFAGGGQIGYDWQTGPW 481
Query: 103 VFGINCHTTAAKDDST-------FYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGA 154
V GI A+ + FY + + G K GY+ L+Y GG
Sbjct: 482 VVGIEGAFNASNANGARSCPNALFYTCRNEIDWLGTATAKLGYALWSRSLVYLRGGAAFG 541
Query: 155 YVIDSSLEKVESDN------------SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
S + +G G ++ ++ + ++ A
Sbjct: 542 NTRIVSTCNTGPNGQYIDYSIPALITQPGCGASSSRTAVGWTIGYGAEFALSRNWTVRAE 601
Query: 203 YRYIPHHIHSVNNSNAKS-DVERVDRKGNAHIASLGINMHF 242
Y + + +VD + + I+++G+N F
Sbjct: 602 SNYFDLGTERHSLAQGGGIPPIQVDVRNHGFISTVGLNYRF 642
>gi|146343440|ref|YP_001208488.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
ORS278]
gi|146196246|emb|CAL80273.1| conserved hypothetical protein; putative outer-membrane immunogenic
protein precursor; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 242
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 62/208 (29%), Gaps = 13/208 (6%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G H+ + + NS G++ G + Q
Sbjct: 32 ATKAPAYVAPIYNWTGFYLGAHLGGAFS-SDNNFSGLGTGNNSNGRFLGGVQAGADWQFA 90
Query: 101 D-FVFGINCHTTAAK-----DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+V G + Y G + + GY+ L+Y GG+ +
Sbjct: 91 PTWVIGAEGQYSWLSGSVGAAFPGGYVYNNSQRGLGSITGRVGYTWGPGLLYVKGGYAYS 150
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ + H + +G G++YM + S A Y+Y +
Sbjct: 151 DNNEKVTLAGNQVGFATSG----DHRNGWTVGGGIEYMFAPNWSAKAEYQYYNFGSATFA 206
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
A V + H G+N F
Sbjct: 207 APAAL--VPTGSFTTDDHTFKAGVNYRF 232
>gi|90424253|ref|YP_532623.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
gi|90106267|gb|ABD88304.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
Length = 247
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 68/237 (28%), Gaps = 15/237 (6%)
Query: 17 IVVPNHSLAVDLYLPR-KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD- 74
++ +A+ L P DL WSG Y+G + D
Sbjct: 5 LLGTVGVVALGLAAPAVAADLPARTYTKAPAYVAAVYDWSGFYIGANAGWGNSRDSRFDE 64
Query: 75 -TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-------FYRLKEKY 126
+ G ++G+ Q +VFG+ A RL K
Sbjct: 65 TFGLDLGAHDADGAVAGGQIGYRWQTGTWVFGLEAQGDWADLSGNHLNPLVFDNRLSSKT 124
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
+G + GY+ ++ L+Y GG + S +G
Sbjct: 125 DAFGLFTGQIGYAWNNALLYVKGGAAVTDRKYDFTVDSTGAPISSTGY---KTRWSGTVG 181
Query: 187 IGLDYMVNYDISLSASYRYIPHH--IHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+GL+Y + S Y +I + + G+ + + IN
Sbjct: 182 VGLEYGFAPNWSFGVEYDHIFESRYTVAFTTPGGLPAADSFRTGGDTDLVTARINYR 238
>gi|148255740|ref|YP_001240325.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407913|gb|ABQ36419.1| putative outer-membrane protein, putative secreted protein
[Bradyrhizobium sp. BTAi1]
Length = 212
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 67/194 (34%), Gaps = 27/194 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G E A +L G +G+N Q VFG+ A
Sbjct: 41 WTGFYIGAFGGYANEDASTA---------ALKGGFAGGTVGYNWQQGPLVFGLEADAAWA 91
Query: 114 KDDST-----FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
++T + L ++ G V + GY+ D++L+YG GG+ S+
Sbjct: 92 DINATVGIPGVFGLTDRIESTGTVRGRIGYAFDTVLLYGTGGYAWGNNKLSA-------T 144
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
G S G G+++M SL Y Y +
Sbjct: 145 VGGVAGSETKFLSGWAAGAGVEWMFAPKWSLKGEYLYKSLESSTYFGGAVPLGT------ 198
Query: 229 GNAHIASLGINMHF 242
N H +G+N HF
Sbjct: 199 LNLHTFQVGVNYHF 212
>gi|148258433|ref|YP_001243018.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1]
gi|146410606|gb|ABQ39112.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1]
Length = 193
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 64/202 (31%), Gaps = 17/202 (8%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFG 105
Q W+G YVG H+ + A + G++ G + Q ++V G
Sbjct: 3 QISPVRSWTGLYVGGHLGGEFSGASGA-------FGRESRFLGGLQFGADYQFAPNWVLG 55
Query: 106 INCHTTAAKDDSTFYRLKEKY-----FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
+ + L + G + + GY+ + L+Y GG+
Sbjct: 56 AEGQYSWLAGNGQTSSLGRRELTRDRNGIGGLTGRLGYTWGAGLLYVKGGYAYQ----DR 111
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
V S + S +G GL+YM + S Y+Y +
Sbjct: 112 SYGVRSRAGAPVAFAVRDNKSGYTVGAGLEYMFAPNWSTKLEYQYYDFGTARFVAPSPGR 171
Query: 221 DVERVDRKGNAHIASLGINMHF 242
V H S+G+N F
Sbjct: 172 LVRNGTFDSTLHTVSVGVNYRF 193
>gi|319783214|ref|YP_004142690.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169102|gb|ADV12640.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 221
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 41/233 (17%), Positives = 75/233 (32%), Gaps = 22/233 (9%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V + L +P + +V + W+G Y GL + ++ T
Sbjct: 4 LMVASAGFLAVLAVPAFAA---DPAVDVPMTAPGF-DWTGYYAGLQAGYGWGQSDISVTE 59
Query: 77 N--RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-----FYRLKEKYFIY 129
+ +G + Q + V G + T +
Sbjct: 60 GAPFSIAPDIDGGFVGGHVAGLWQFDQAVLGAEADLNYSSVGGTTVSALGSTFGTDIKWF 119
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G V KAGY++D LL+YG+GG A + S + +G G+
Sbjct: 120 GSVNAKAGYAMDRLLVYGIGGVAFAGIETSQV--------AGPAFDSTRTNVGWTVGAGV 171
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
DY + + A YRY + +D D+ + + ++ F
Sbjct: 172 DYALTDKFVVGAQYRYYDFGSEHYEVAEPFNDR---DQNVKLNTVGINLSYKF 221
>gi|27376315|ref|NP_767844.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27349455|dbj|BAC46469.1| outer-membrane immunogenic protein precursor [Bradyrhizobium
japonicum USDA 110]
Length = 241
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 65/197 (32%), Gaps = 14/197 (7%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHT 110
W+G Y+G H+ + + + ++ N G+++G + Q +FV G+
Sbjct: 43 YNWTGFYLGAHVGGAFSSDNNFNGLS-TGNNGNGRFLGGVQVGADWQFNPNFVVGVEGQY 101
Query: 111 TAAKDD-----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ G + + GY+ L+Y GG+ + + V
Sbjct: 102 SWLSGSVGAVFPGGVAYTNDQRGLGSITGRVGYTWGPGLLYVKGGYAYSDNNEK----VT 157
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
H + +G GL+YM + S A Y+Y A
Sbjct: 158 VGGVPTGFIIDGDHRNGYTVGAGLEYMFAPNWSAKAEYQYYNFGDAHF---TAGPLAGTG 214
Query: 226 DRKGNAHIASLGINMHF 242
+ + H G+N F
Sbjct: 215 NFTTDDHTFKAGVNYRF 231
>gi|148252448|ref|YP_001237033.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
BTAi1]
gi|146404621|gb|ABQ33127.1| putative outer-membrane immunogenic protein precursor
[Bradyrhizobium sp. BTAi1]
Length = 243
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 65/208 (31%), Gaps = 13/208 (6%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G H+ + + + NS G+++G + Q
Sbjct: 33 ATKAPAYVAPIYNWTGFYLGAHLGGAFSS-DNNFSGLATGNNSNGRFLGGVQVGADWQFA 91
Query: 101 D-FVFGINCHTTAAKDD-----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+V G + + + G + + GY+ L+Y GG+ +
Sbjct: 92 PTWVIGAEGQYSWLSGNVGAAFPGGFVYTNSQRGLGSITGRFGYTWGPGLLYVKGGYAYS 151
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ V ++ H + +G G++YM S A Y+Y +
Sbjct: 152 DNNEK----VTLAGNQIGFATNGDHRNGWTVGAGIEYMFAPSWSAKAEYQYYNFGSATFT 207
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
V + H G+N F
Sbjct: 208 APAGL--VPTGSFTTDDHTFKAGVNYRF 233
>gi|192291529|ref|YP_001992134.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris TIE-1]
gi|192285278|gb|ACF01659.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris TIE-1]
Length = 246
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 63/218 (28%), Gaps = 24/218 (11%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYE--------THPLADTINRKTYNSLLPNGLGI 91
WSG YVG + T + + G
Sbjct: 28 PYTKAPPIIAAAYDWSGFYVGANGGWGTSRNCWDYLGTTATPAVALGEGCHDASGGTAGG 87
Query: 92 ELGHNIQLEDFVFGINCHTTAAKDDSTFYRL--------KEKYFIYGDVVLKAGYSVDSL 143
+ G+N Q+ ++VFG+ A + L K +G + GY+ ++
Sbjct: 88 QAGYNWQISNWVFGVEAQGNWADFKGSNVSLLVVPGTTNDSKIDAFGLFTARVGYAWNNA 147
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
L+Y GG + + A +G GL+Y + + Y
Sbjct: 148 LLYVKGGAAVTSDKYTVYGNRTGAITDTA----SETRWGAAVGGGLEYGFSPAWTFGVEY 203
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
++ + + D K + + + IN
Sbjct: 204 DHLFMGSRDITFATTSIDH----IKQDVDVVTARINYR 237
>gi|75674930|ref|YP_317351.1| outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74419800|gb|ABA03999.1| possible outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 209
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 70/234 (29%), Gaps = 43/234 (18%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
++ +++V + + PR Y W+G Y+G HI +
Sbjct: 4 ILLITAAVLVSVPAASAADLAPRPYTKAP------PYVPAPIYNWTGFYLGGHIGGAFSN 57
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ G++ G ++Q ++VFG+ + L
Sbjct: 58 GRDGVFLG------------GVQSGWDLQFAPNWVFGLEGSYSFLDSGIAGANLG----- 100
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + GY+ GG YV V N+ + +G G
Sbjct: 101 LGSATARLGYTW--------GGPALFYVKGGYGTAVLRGNNAIFGINPNIGLDGYTVGAG 152
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+YM + + Y+Y + + + H +G+N F
Sbjct: 153 LEYMFTQNWAGKVEYQYFDFGR-----------IAGTNINLDTHTVKVGLNYRF 195
>gi|92116045|ref|YP_575774.1| carbohydrate-selective porin OprB [Nitrobacter hamburgensis X14]
gi|91798939|gb|ABE61314.1| Carbohydrate-selective porin OprB [Nitrobacter hamburgensis X14]
Length = 692
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 44/247 (17%), Positives = 73/247 (29%), Gaps = 32/247 (12%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
L V ++ + ++A D+ L D W+G Y G H
Sbjct: 37 VLAGVALSALALGGSAVAADVGAS----LLPTKAMPRPVID-----WTGLYFGAHAGFGG 87
Query: 68 --ETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA----------AK 114
T L D + N G++ G+NIQL + G+ + +K
Sbjct: 88 GRSTATLVDPASTTGRNDYGGIISGVQAGYNIQLPSGLLLGLEADISFPNYIESNSDVSK 147
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ + +++ G + GY+ L Y GG A +
Sbjct: 148 LATARSAVTQQWDFIGSARGRIGYATGPWLTYASGGLAFAGERYLNDLPSGDQEKAL--- 204
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G GL+Y S Y Y +V +A +D H
Sbjct: 205 ---DMRLGWAAGAGLEYAFTPSWSARLEYLYYRFDKTNVQFPSAAQYAATMDM----HSI 257
Query: 235 SLGINMH 241
+G+N
Sbjct: 258 RVGLNRK 264
>gi|15420178|gb|AAK97311.1|AF308169_1 Pap31 [Bartonella henselae phage 60457]
Length = 239
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 73/246 (29%), Gaps = 63/246 (25%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ P+ + A D+ +P + W+G Y+G + + D
Sbjct: 1 IALISPSAAQAADVIVPH--------EVAPTVISAPAFSWTGFYIGGQVGNFSSKVEITD 52
Query: 75 T------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST--------- 118
++ GI G N+ L + + G+ A +
Sbjct: 53 PNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAKVIR 112
Query: 119 ---------------------------------FYRLKEKYFIYGDVVLKAGY-SVDSLL 144
L K G ++ G+ + D ++
Sbjct: 113 EDELANFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLALKEKWSGATRVRIGFTAADRIM 172
Query: 145 IYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
Y GG A V S KV +++ + LG G+D+ + ++ L
Sbjct: 173 PYVAGGVSYAQVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDFAMTDNVLL 232
Query: 200 SASYRY 205
A YRY
Sbjct: 233 RAEYRY 238
>gi|192289353|ref|YP_001989958.1| porin [Rhodopseudomonas palustris TIE-1]
gi|192283102|gb|ACE99482.1| porin [Rhodopseudomonas palustris TIE-1]
Length = 243
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 67/211 (31%), Gaps = 26/211 (12%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVF 104
Y W+G Y+G HI + T + N G++ G++ Q ++V
Sbjct: 35 YAPAPVYNWTGFYIGGHIGGAFSGDNSIGTGVTASDNGK--FLGGVQAGYDWQFAPNWVL 92
Query: 105 GINCHTTAA-------------KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
G+ + + + V + GY+ L+Y GG+
Sbjct: 93 GVEGQYSWLSGTNQSVAFGGTLNGAPGVFTYADNQRGLASVTGRLGYTWGPALLYVKGGW 152
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
A SS + A D +G GL+Y+ + S Y+Y
Sbjct: 153 AYA--DYSSSLTFVPNAGGFAAVAIDSKKDGYTVGGGLEYLFAPNWSGKIEYQYYDFGNV 210
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N K + H+ G+N F
Sbjct: 211 DLGN--------GFSAKNDEHVVKAGLNYRF 233
>gi|300024536|ref|YP_003757147.1| porin [Hyphomicrobium denitrificans ATCC 51888]
gi|299526357|gb|ADJ24826.1| porin [Hyphomicrobium denitrificans ATCC 51888]
Length = 232
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 73/213 (34%), Gaps = 29/213 (13%)
Query: 54 WSGNYVGLHISRLYETHPLAD---------TINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
W+G Y+G H+ + D + + G+ G+N+QL + V
Sbjct: 25 WTGPYIGAHVGGAWGNASTTDDPRDWGNDPKFIGPFDQNPVGVIAGLTAGYNVQLSNIVL 84
Query: 105 GINCHTTAAKDDSTFYRLKEKYF----------IYGDVVLKAGY-SVDSLLIYGMGGFGG 153
G+ DS + IYG V +AG+ + S L+YG GGF
Sbjct: 85 GVEGDIGYLGLDSALDTPSSQSGNHQSIVLDSGIYGAVTARAGFLATPSTLVYGKGGFAF 144
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + G + V G G++ + ++S+ Y + +
Sbjct: 145 YNGDATQSTTADGY-----VFHGTGTFTGWVAGGGIEQRLTDNLSIKVEYLHFDFGSQAG 199
Query: 214 NNSN----AKSDVERVDRKGNAHIASLGINMHF 242
+ ++ V + +A G+N HF
Sbjct: 200 DQTSISDPPVGHVYGNSTRIDADTVKAGLNYHF 232
>gi|218675314|ref|ZP_03524983.1| outer membrane protein [Rhizobium etli GR56]
Length = 211
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 69/205 (33%), Gaps = 24/205 (11%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
EA + G W G Y+G + + + + G + G+N
Sbjct: 31 PEAPIAQDAPVKPAGNWEGFYLGGAGTY--------NMGDFGSDRHTYGFGGQVFTGYNW 82
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
Q V+G+ + DD + +K KY G V + GY ++ L+YG G +
Sbjct: 83 QQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNIK 142
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S + +G G++ V +I+ YRY + +
Sbjct: 143 VS-----------DDTSDESKTAYGYTVGAGVEAFVTNNITTRLEYRYTDYQSKDYD--- 188
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
D R + + LGI + F
Sbjct: 189 --LDSGSFSRGYDENSVKLGIGVKF 211
>gi|15420174|gb|AAK97309.1|AF308167_1 Pap31 [Bartonella henselae phage 60457]
Length = 241
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 72/249 (28%), Gaps = 63/249 (25%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P + W+G Y+G + + D
Sbjct: 1 IALISXSAAQAADVIVPH--------EVAPTVISAPAFSWTGFYIGGQVGNFSSKVEITD 52
Query: 75 T------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST--------- 118
++ GI G N+ L + + G+ A +
Sbjct: 53 PNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAKVIR 112
Query: 119 ---------------------------------FYRLKEKYFIYGDVVLKAGY-SVDSLL 144
L K G ++ G+ + D ++
Sbjct: 113 EDELVNFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLALKEKWSGATRVRIGFTAADRIM 172
Query: 145 IYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
Y GG A V S KV +++ + LG G+D+ + ++ L
Sbjct: 173 PYVAGGVSYAQVQAVSSTKVTKAADDAEIASAQLFDKTKTLVGFTLGGGVDFAMTDNVLL 232
Query: 200 SASYRYIPH 208
A YRY
Sbjct: 233 RAEYRYSDF 241
>gi|75674387|ref|YP_316808.1| outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74419257|gb|ABA03456.1| possible outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 453
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 71/232 (30%), Gaps = 26/232 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
LA + DL Y W+G YVG++ + ++
Sbjct: 10 LASTAMSAQAADLAPRPYTKAPPIAPVY-DWTGLYVGVNAGLGLGRNRAVHDFGVGAIST 68
Query: 84 ---LLPNGLGIELGHNIQ----LEDFVFGINCHTTAAKDDSTFYR------LKEKYFIYG 130
L G ++G+N Q VFGI A ++ +G
Sbjct: 69 HLQPLGAVGGGQIGYNWQTNSFFGPLVFGIEADIQGADMTDNRTNFAGLLQYNQRLDWFG 128
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ G +L Y GG+ +V + + F G + G G++
Sbjct: 129 TARGRVGLINGPMLTYVTGGWAYGHVGTTVI-------QGGVPFAFSGGRNGWTFGSGVE 181
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + Y Y+ + + + + + + +I G+N F
Sbjct: 182 AALGGNWTGKIEYLYLDFGNRTDSFAG-----QALRSEMRENIFRAGLNYRF 228
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 73/223 (32%), Gaps = 35/223 (15%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYET--HPLADTINRKTYNSLLPNGL--GIELGHNIQLE 100
Y W+G Y+G ++ +++ +L P+G G ++G+N Q
Sbjct: 233 PYAPVATANWNGLYLGGNVGGGVGRNRTTISNPAGNLAQFNLAPDGFVGGGQIGYNWQAG 292
Query: 101 DFVFGINCHTTAAK----------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ V G+ A + K +G V + GY+V + + Y GG
Sbjct: 293 NIVLGLETDFQGATLQDNKTCIGCVPGASFDFNSKLQWFGTVRGRLGYAVGNSMFYATGG 352
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM-----------VNYDISL 199
F + + + + F + +G G++ + +
Sbjct: 353 FAYGNIRTALNTPLNN-------FNFSNTRTGYAVGGGIETPLPMVNLFGGPLFGPNWTS 405
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ Y ++ S N + + HI G+N HF
Sbjct: 406 TTEYLFVDLGRSSFNIGGGPNVLTT---GAQEHIFRTGLNYHF 445
>gi|27379812|ref|NP_771341.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27352965|dbj|BAC49966.1| blr4701 [Bradyrhizobium japonicum USDA 110]
Length = 250
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 67/220 (30%), Gaps = 23/220 (10%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYET--------HPLADTINRKTYNSLLPNGLGI 91
WSG Y+G + A + + ++ +G
Sbjct: 29 PYTKAPVAVASIYNWSGFYIGGNAGGGSSHNCWDLTAVGVAAIPVTAEGCHNATGALVGG 88
Query: 92 ELGHNIQLEDFVFGINCHTTAAKDDSTFYRL---------KEKYFIYGDVVLKAGYSVDS 142
++G+ Q +VFG+ A + K G + GY+ ++
Sbjct: 89 QIGYRWQSSSWVFGLEAQGDWADLKGSNVSAPAALFPLVNNTKIDAIGLFTGQVGYAWNN 148
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+L Y GG + S + + +G G+++ + S++
Sbjct: 149 VLWYVKGGAAVTHNKFS------GTLAGITLDTANETRWGGTVGTGIEFGFAPNWSVAVE 202
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y ++ H+ + K + + ++ +N F
Sbjct: 203 YNHLFMGKHTDTFTFLGVATRSDSIKQDVDMGTVRLNYTF 242
>gi|316936292|ref|YP_004111274.1| hypothetical protein Rpdx1_5001 [Rhodopseudomonas palustris DX-1]
gi|315604006|gb|ADU46541.1| hypothetical protein Rpdx1_5001 [Rhodopseudomonas palustris DX-1]
Length = 561
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 77/259 (29%), Gaps = 40/259 (15%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
+V + + S A +P L A W+G Y G+H+ + +
Sbjct: 5 LVTAAALATVISPAAAADMPGFPPLMPAA--------PVQWNWTGLYWGVHVGGSFGSSS 56
Query: 72 LADTINRKTYNSL---LPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDST--------- 118
+D Y GI++G+N Q +++ G+ ++ T
Sbjct: 57 FSDPAGPGLYGGNVRSPAALAGIQVGYNYQPNANWLIGVEADLSSMNAKGTDTCMASSGL 116
Query: 119 --FYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + +AG L+Y GG + + N
Sbjct: 117 FISSNCRVRQDALATLTGRAGLVTGPGGRTLLYAKGGAAFLSERLD----ITTGNPLGNS 172
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA----------KSDVE 223
+ +G G++ + S+ Y Y + ++ +
Sbjct: 173 TDTNDGRWGWTVGAGIERALAPAWSVKLEYGYADFGSRDMATPSSFRLVPGVGYFPTPQG 232
Query: 224 RVDRKGNAHIASLGINMHF 242
+ + H +G+N+ F
Sbjct: 233 TSKVEQDLHAVKVGLNLKF 251
>gi|150396008|ref|YP_001326475.1| porin [Sinorhizobium medicae WSM419]
gi|150027523|gb|ABR59640.1| porin [Sinorhizobium medicae WSM419]
Length = 212
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 77/228 (33%), Gaps = 28/228 (12%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+++V + A D+ A EY + WSG YVG I H AD
Sbjct: 13 MALVAFQAAHAADVVDEIP------AAPAAEYTEPAVRNWSGAYVGGTI---DWHHGEAD 63
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
N + G G+ G+N+Q V+G +DS + + + G V
Sbjct: 64 ATGN---NKSVGTGGGLYGGYNVQDGQMVYGGEADINYTGNDSHSSGRRVQQGLNGSVRA 120
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ G V+ +L+YG G K G D G+G + V
Sbjct: 121 RVGVDVNPVLVYGTAGVALGNAE-----------LKTPAGSDDKTLVGWTAGVGAETFVT 169
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+I+ A YRY + + + H LG+ + F
Sbjct: 170 DNITARAEYRYTDYGSKDFRTGG-----TTISSGYDEHAVKLGMGVKF 212
>gi|90418791|ref|ZP_01226702.1| hypothetical protein SI859A1_00696 [Aurantimonas manganoxydans
SI85-9A1]
gi|90336871|gb|EAS50576.1| hypothetical protein SI859A1_00696 [Aurantimonas manganoxydans
SI85-9A1]
Length = 263
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 74/263 (28%), Gaps = 34/263 (12%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
++ + +LA D+ W+G Y+G +
Sbjct: 4 LALLLATTAFVTPALAADVIYEEP----PAPAPMAIEPVATTATWTGLYIGGQAGVAFGN 59
Query: 70 HPLADTIN-----------RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD--- 115
T N + G +G++ Q+ DFV G
Sbjct: 60 ESDGATFNPGGGGPFGTGTYSEDDDNAGFIGGGHIGYDYQINDFVVGAVADINYIDAETN 119
Query: 116 ------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + G V + GY++DS+L+YG GG A V +++ S
Sbjct: 120 RSYTTGGGSTFSTSSDINYLGTVRARVGYAMDSVLLYGTGGLAYAGVDNNASAPASSGTF 179
Query: 170 KNAKGRFD--GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV-- 225
N D +G G+D M +IS Y Y + + S
Sbjct: 180 TNYTFEQDENDTDIGYAVGGGVDVMATNNISFGVEYLYTNLGSNDQTITGTDSTNGNTVS 239
Query: 226 ------DRKGNAHIASLGINMHF 242
+ + H + F
Sbjct: 240 FTSESNNDDLDFHTIWAKASYRF 262
>gi|86357119|ref|YP_469011.1| outer membrane protein [Rhizobium etli CFN 42]
gi|86281221|gb|ABC90284.1| outer membrane protein [Rhizobium etli CFN 42]
Length = 211
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 69/205 (33%), Gaps = 24/205 (11%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
EA + G W G Y+G + + + + G + G+N
Sbjct: 31 PEAPVAQDAPVKPAGNWEGFYLGGAGTY--------NMGDFGSDRHTYGFGGQVFTGYNW 82
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
Q V+G+ + DD + +K KY G V + GY ++ L+YG G V
Sbjct: 83 QAGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNVK 142
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S + +G G++ V +I+ YRY + +
Sbjct: 143 VS-----------DGTSDESKTNYGYTVGAGVEAFVTNNITTRLEYRYTDYQSKDYD--- 188
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
D R + + LGI + F
Sbjct: 189 --LDSGSFSRGYDENSVKLGIGVKF 211
>gi|241203671|ref|YP_002974767.1| hypothetical protein Rleg_0932 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857561|gb|ACS55228.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 205
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 68/234 (29%), Gaps = 33/234 (14%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L L++ V ++A DL + + WSG Y+G +
Sbjct: 5 LVACAVLALSVAVPAVAADLT-------YETPPAPSAGEVSSAYDWSGFYLGAQGGYSWS 57
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ + + G+ G+N Q + V+GI + + L+
Sbjct: 58 QAKI-----LGSDQDIDSGTSGLHAGYNFQSGNIVYGIENDFNYNFEKNDNANLE----W 108
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
+ GY+ D L + G A G+ DG G G
Sbjct: 109 DASGRARVGYAWDRTLFFATAGVAAGGGKVDIS----------AAGKKDGILIGWTAGGG 158
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ V +I + YR+ ++ D G + F
Sbjct: 159 IEHAVTDNILVRGEYRHSDFGNKDFGSTIG-------DVGATQDKVLFGTSYKF 205
>gi|15964926|ref|NP_385279.1| outer membrane protein [Sinorhizobium meliloti 1021]
gi|307300997|ref|ZP_07580766.1| porin [Sinorhizobium meliloti BL225C]
gi|15074105|emb|CAC45752.1| Probable outer membrane protein [Sinorhizobium meliloti 1021]
gi|306903952|gb|EFN34538.1| porin [Sinorhizobium meliloti BL225C]
Length = 212
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 77/228 (33%), Gaps = 28/228 (12%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+++V + A D+ A EY + WSG YVG I H AD
Sbjct: 13 MALVAFQAAHAADVVDEVP------AAPAAEYTEPAVRNWSGAYVGGTI---DWHHGEAD 63
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
N + G G+ G+N+Q V+G +DS + K + G V
Sbjct: 64 ATGN---NKSVGFGGGLYGGYNVQDGQMVYGGEADVNYTGNDSRSSGRRVKQGVNGSVRG 120
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ G ++ +L+YG G S G D G+G + V
Sbjct: 121 RVGVDLNPVLVYGTAGVALGNAKLS-----------TPAGSDDKTLVGWTAGVGAETFVT 169
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+I+ A YRY + + + H LG+ + F
Sbjct: 170 DNITARAEYRYTDYGSKDFRAGG-----STISSGYDEHSVKLGMGVKF 212
>gi|316932401|ref|YP_004107383.1| putative outer-membrane immunogenic protein [Rhodopseudomonas
palustris DX-1]
gi|315600115|gb|ADU42650.1| putative outer-membrane immunogenic protein precursor; putative
secreted protein [Rhodopseudomonas palustris DX-1]
Length = 235
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 28/208 (13%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVF 104
Y W+G Y+G HI + T + N G++ G++ Q ++V
Sbjct: 35 YAPAPIYNWTGFYIGGHIGGAFSGDNSIGTGVTASDNGK--FLGGVQAGYDWQFAPNWVL 92
Query: 105 GINCHTTAAKDD----------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
G+ + Y + V + GY+ L+Y GG+ A
Sbjct: 93 GVEGQYSWLSGTNQSVAFVDGLGNSYLFSDNQRGLASVTGRLGYTWGPALLYVKGGWAYA 152
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
S D +G GL+Y+ + S Y+Y ++
Sbjct: 153 DYSTSLTVNGFGVAV-------DSKTDGYTVGGGLEYLFAPNWSGKIEYQYYDFGNVNLG 205
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
N K + H+ G+N F
Sbjct: 206 N--------GFSAKNDEHVVKAGLNYRF 225
>gi|27380404|ref|NP_771933.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27353568|dbj|BAC50558.1| bll5293 [Bradyrhizobium japonicum USDA 110]
Length = 277
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 73/279 (26%), Gaps = 54/279 (19%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
V ++ A DL Y W+G YVG ++
Sbjct: 2 KKFLLAVASVVLGTASVQAADLAAH---------YTKAPMMAPAY-NWTGFYVGGNVGGQ 51
Query: 67 YETHPLADTINRKTYNSLLPNGL------------------GIELGHNIQLEDFVFGINC 108
+ + + + + + G G+N Q+ V G+
Sbjct: 52 WGSSDPSTSTVFSPTGYFAASSVPAINTVGAQGINSSSVTGGFTAGYNWQVNHAVLGLEG 111
Query: 109 HTTAAKDDSTFYRL---------------KEKYFIYGDVVLKAGY-SVDSLLIYGMGGFG 152
+ + + G+ + + L+Y GG
Sbjct: 112 DINYFGFKGSATGSALYPCCAPTGFTVSSSVSADWLATIRGRIGFLAAPTWLLYATGGAA 171
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
A V + ++ G+G +Y SL A Y Y+ S
Sbjct: 172 IAEVKG-NFNFTDTFAGATESSAIRDTRLGWTAGVGTEYAFGGGWSLKAEYLYVDLGRAS 230
Query: 213 VNNSNA---------KSDVERVDRKGNAHIASLGINMHF 242
++N S+V ++I +G+N F
Sbjct: 231 ATSTNLAAFVPAIAFPSNVYTHSVDLKSNIVRVGVNYKF 269
>gi|209548422|ref|YP_002280339.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209534178|gb|ACI54113.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 204
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 65/234 (27%), Gaps = 34/234 (14%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L L++ ++A DL Q WSG Y+G +
Sbjct: 5 LIACAVLALSAAVPAVAADLTYETPAPAAE--------QISSAYNWSGFYLGGQGGYSWS 56
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ + ++ G+ G+N Q + V+GI + L+
Sbjct: 57 QTKI-----LGSDENIDGGTAGLHAGYNFQSGNIVYGIENDFNYNFKKNDDANLE----W 107
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
+ GY+++ L + G G+ DG G G
Sbjct: 108 DASGRARVGYALNRTLFFATAGVAAGGGKVDIPTA----------GKKDGILIGWTAGGG 157
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ V I + YR+ ++ D G + F
Sbjct: 158 IEHAVTDHILVRGEYRHSDFSNKDFGSAIG-------DVGAKQDKVLFGTSYKF 204
>gi|90419513|ref|ZP_01227423.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans
SI85-9A1]
gi|90336450|gb|EAS50191.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans
SI85-9A1]
Length = 223
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 65/203 (32%), Gaps = 26/203 (12%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
+WSG Y G + + + G+ G+N Q + FVFG
Sbjct: 41 APSTPVYVWSGAYAGAFVGYNTSNFDQSTGASF----DGDGFVGGVYTGYNWQADQFVFG 96
Query: 106 INCHTTAAKDDSTFYR------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+ + D++ L I+G + G +VD L++ GG A S
Sbjct: 97 LEADLGGSDVDASGTNAATGAQLDADSNIFGSFRARVGVAVDPFLVFATGGLAAARNELS 156
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ LG G++ V+ D++ YRY + + N
Sbjct: 157 LNGFSD-----------SQTSIGYTLGAGVEARVSDDVTTRLEYRYSDFGSETYDLGN-- 203
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
V + H GI + F
Sbjct: 204 ---TSVSSGFDEHSIRAGIALKF 223
>gi|116251075|ref|YP_766913.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115255723|emb|CAK06804.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|220979415|gb|ACL97989.1| outer membrane protein B2 [Rhizobium leguminosarum bv. viciae]
Length = 205
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 69/234 (29%), Gaps = 33/234 (14%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L L++ V ++A DL + Q WSG Y+G +
Sbjct: 5 LVACAALTLSVAVPAVAADLT-------YETPPAPSAGQVSSAYDWSGFYLGAQGGYSWS 57
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ + + G+ G+N Q + V+GI + + L+
Sbjct: 58 QATI-----LGSDQDIDSGTSGLHAGYNFQSGNIVYGIENDFNYNFEKNDNANLE----W 108
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
+ GY+ D L + G A G+ DG G G
Sbjct: 109 DASGRARVGYAWDRTLFFATAGVAAGGGKVDI----------PAAGKKDGILIGWTAGGG 158
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ V +I + A YR+ ++ + G + F
Sbjct: 159 IEHAVTDNILVRAEYRHSDFGNKDFGSTIG-------EVGATQDKVLFGTSYKF 205
>gi|148255738|ref|YP_001240323.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407911|gb|ABQ36417.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 260
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 75/249 (30%), Gaps = 22/249 (8%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGI--WSGNYVGLHISRLYE----- 68
++ V A+ L D + W+G Y+G + +
Sbjct: 4 TLFVTAGVAALGLAPASAADFAARPYGKAPPPAYVTPLPSWAGFYLGANGGADWSRNCWT 63
Query: 69 ----THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST------ 118
+ ++ +G ++G+ Q +VFG+ S+
Sbjct: 64 LNRVNGVPVVPTQSEGCHNATSGLIGGQIGYRWQAASWVFGLEAQGNWTDLKSSNASSAA 123
Query: 119 ---FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS-SLEKVESDNSKNAKG 174
K G + GY+ ++L Y GG A+ + +
Sbjct: 124 FAAGITNNTKTDAIGLFTGQIGYAWGNVLWYVKGGAAVAHNKYTGTANAAAPVAVGTLLD 183
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD-RKGNAHI 233
+G G+++ + S++ Y ++ + RVD K + +
Sbjct: 184 SASETRWGGTVGTGVEFGFAPNWSVAVEYDHLFMGSRDITFPATAIVNARVDTIKQDIDM 243
Query: 234 ASLGINMHF 242
A++ +N F
Sbjct: 244 ATVRVNYRF 252
>gi|154246409|ref|YP_001417367.1| porin [Xanthobacter autotrophicus Py2]
gi|154160494|gb|ABS67710.1| porin [Xanthobacter autotrophicus Py2]
Length = 248
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/228 (14%), Positives = 62/228 (27%), Gaps = 28/228 (12%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL--------LPNGLG 90
W+G Y+G ++ + + + Y G
Sbjct: 25 TKYPVKAVAVVPVFSWTGFYIGANVGYGGDKFTFDEVESYYGYPYYANSTSLNSSGFFAG 84
Query: 91 IELGHNIQL-EDFVFGINCHTTAAKDDST--------------FYRLKEKYFIYGDVVLK 135
++G+N Q + V G+ + + +G + +
Sbjct: 85 GQIGYNYQFANNVVLGVETDLQWSGIEGKEDYSSVYVYGGYPYTSSYGASVDYFGTIRAR 144
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY+ D L Y GG SS + S +A +G G++Y +
Sbjct: 145 IGYAFDRFLPYITGGAAYGKTKISSSYAGDGFGSLSASA----TNWGWTVGGGVEYAITN 200
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVD-RKGNAHIASLGINMHF 242
+ + Y Y+ ++ H G+N F
Sbjct: 201 NWTFKTEYLYVDLGSTDYAYADGYGYYSYAGTVDTKFHTLKAGVNYKF 248
>gi|13470446|ref|NP_102014.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14021187|dbj|BAB47800.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 221
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 65/197 (32%), Gaps = 18/197 (9%)
Query: 53 IWSGNYVGLHISRLYETHPLADTIN--RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
W+G Y GL + ++ T + +G + Q + V G
Sbjct: 36 DWTGYYAGLQAGYGWGQSDISGTEGEPFSVSPDINGGFVGGHIAGLWQFDQAVIGAEADL 95
Query: 111 TAAKDDST-----FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ + T +G V KAGY++D +L+YG+GG A + S
Sbjct: 96 NYSSVNGTAEAEPGNNFGTDIKWFGSVNAKAGYAMDRVLVYGIGGVAFAGIETSQS---- 151
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ LG G+DY + + A YRY + SD
Sbjct: 152 ----AGSAFSETRANVGWTLGAGVDYALTDKFVVGAQYRYYDFGSEHYD---GSSDFVGR 204
Query: 226 DRKGNAHIASLGINMHF 242
D+ + + ++ F
Sbjct: 205 DQDTKLNTVGINLSYKF 221
>gi|192288904|ref|YP_001989509.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris
TIE-1]
gi|192282653|gb|ACE99033.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris
TIE-1]
Length = 689
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 63/207 (30%), Gaps = 27/207 (13%)
Query: 49 DEYGIWSGNYVGLHISR--LYETHPLADTIN-RKTYNSLLPNGLGIELGHNIQLE-DFVF 104
D WSG YVG H + L D + + N G + G+N + +
Sbjct: 65 DPAYDWSGFYVGAHAGYVRGHAGATLQDATSVAQNSNGAGGITAGAQAGYNFVTGSNLLL 124
Query: 105 GINCHTTA----------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
G+ + ++ D+ + YG V + G L Y GG
Sbjct: 125 GVEADISFPSYLPQNAVLSEFDNGTANTLQHLDYYGTVRARLGVIAGRWLGYVTGGLAFE 184
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ + GR G G++Y + S+ Y Y + SV+
Sbjct: 185 HERYLT---------DPDAGRVMNARIGWAAGAGVEYGFAPNWSVRIEYLYSQYQNASVD 235
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMH 241
S + N +G+N
Sbjct: 236 LPTGASYATSL----NLQTVRVGVNRK 258
>gi|92117214|ref|YP_576943.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14]
gi|91800108|gb|ABE62483.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14]
Length = 238
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 66/203 (32%), Gaps = 18/203 (8%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFG 105
W+G Y+ A + S G++ G + Q ++V G
Sbjct: 37 PPQAVYNWTGFYI-------GGHLGGAFGGDSSLSGSDGRFLGGVQGGADYQFANNWVLG 89
Query: 106 INCHTTAAKDD------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+ ++ + G V + GY+ L+Y GG+ DS
Sbjct: 90 AEAQYSWLTNNNGGAVFPGGNIVTGNDRGLGSVTGRLGYAWGPTLLYAKGGYAF---RDS 146
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
L ++ A + +G GL+YM + S Y+Y + + +
Sbjct: 147 RLGVTDAAGVPLAFATTGNRDNGYTVGAGLEYMFAPNWSAKVEYQYYNFGKTTF-AAGSP 205
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+D+ + + H G+N F
Sbjct: 206 TDIVGTSFRNDDHTVKAGLNYRF 228
>gi|307317731|ref|ZP_07597169.1| porin [Sinorhizobium meliloti AK83]
gi|306896493|gb|EFN27241.1| porin [Sinorhizobium meliloti AK83]
Length = 212
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/228 (21%), Positives = 77/228 (33%), Gaps = 28/228 (12%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+++V + A D+ A EY + WSG YVG I H AD
Sbjct: 13 MALVAFQAAHAADVVDEVP------AAPAAEYTEPAVRNWSGAYVGGTI---DWHHGEAD 63
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
N + G G+ G+++Q V+G +DS + K + G V
Sbjct: 64 ATGN---NKSVGFGGGLYGGYDVQDGQMVYGGEADVNYTGNDSRSSGRRVKQGVNGSVRG 120
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ G ++ +L+YG G S G D G+G + V
Sbjct: 121 RVGVDLNPVLVYGTAGVALGNAKLS-----------TPAGSDDKTLVGWTAGVGAETFVT 169
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+I+ A YRY + + + H LG+ + F
Sbjct: 170 DNITARAEYRYTDYGSKDFRAGG-----STISSGYDEHSVKLGMGVKF 212
>gi|319784400|ref|YP_004143876.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170288|gb|ADV13826.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 220
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/229 (17%), Positives = 70/229 (30%), Gaps = 20/229 (8%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
+ V A+ + E + W+G Y GL++ + H
Sbjct: 10 PLAVALGLFALSGTAYAADVVSEEPPAPAPIAELPVASWAGPYAGLNVGYGFSGHTKEKD 69
Query: 76 INRKTYNSLLPNGLG-IELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
+ + +G + G+ Q E+FV+G + K G +
Sbjct: 70 LGVDNVDVGTKGFVGSVFGGYQWQQENFVYGAEAELGYNGVKGDDSGVNSKAGFEGSLRA 129
Query: 135 KAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ GY+V +L+YG GG G + + G G+G D +
Sbjct: 130 RLGYAVTPEILLYGTGGLAGRSLKVED----------DVYGSDRATLLGWTAGLGTDIKL 179
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ YRY S + K + + G+ M F
Sbjct: 180 TDNVFGRVEYRYTDFGSKSFDGIG--------KVKATDNRVTFGVGMKF 220
>gi|182679250|ref|YP_001833396.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
gi|182635133|gb|ACB95907.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
Length = 250
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 70/207 (33%), Gaps = 29/207 (14%)
Query: 54 WSGNYVGLHISRLYETHP----LADTINRKTYNSLLPNGL--GIELGHNIQLE------- 100
W+G YVG I + + R + S P+G+ G +G+N Q
Sbjct: 42 WTGVYVGGDIGYAWGNTSYNSQIFSAPARFAFGSYSPDGVTGGAHVGYNFQAGPSFIGTG 101
Query: 101 DFVFGINCHTTAAK-----DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
+FV GI + K I G + + G + D LIY GG
Sbjct: 102 NFVIGIEGDVQGSNYSKSVVGFANDIYTSKLDITGSIRGRLGIAFDRALIYATGGAAFGG 161
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ + + A D +G G++Y V + S+ A Y Y + +
Sbjct: 162 ITNQLQLRN------GAFFSNDRTAVGWTVGGGIEYAVTNNWSVRAQYLYSDYGHTNSFF 215
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
NA+ K ++G + F
Sbjct: 216 PNAQVHKHDTQNK-----VTVGFSYKF 237
>gi|163869043|ref|YP_001610277.1| hemin binding protein [Bartonella tribocorum CIP 105476]
gi|161018724|emb|CAK02282.1| hemin binding protein [Bartonella tribocorum CIP 105476]
Length = 296
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 70/302 (23%), Gaps = 71/302 (23%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKID-----LFNEADNNVEYQDDEYGIWSGNYV 59
LF + + + + + A D + ++ + + WSG Y
Sbjct: 2 KTKCLFVLSLFTFMTTSTAQAADTVISQQSQPSVSAPSSLSSRLSPVTVSAPFSWSGFYF 61
Query: 60 GLHISRLYETHPLADT----------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
G + L L ++R G G NI L + V +
Sbjct: 62 GGQLGHLSSKSTLNYAPESQGGKWALVDRGLSPKPTGFVAGFYAGSNIDLGNSLVVSFDT 121
Query: 109 HTTAAK-------------------------------------------DDSTFYRLKEK 125
+ D + K
Sbjct: 122 DMIWSGKKNTQTDNGKKILDKLDSVHAAFHDAGIPIITSEVQDETIPNYSDIIVSSVTLK 181
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-----GHG 180
G + G++ L+ Y GG + +S D
Sbjct: 182 EKWAGAARARIGFASHRLMPYIAGGVAYTQMQYILSLLTKSQEDSTVFASGDVFDKTKTM 241
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+G G D + DI + YRY N K V H LGI
Sbjct: 242 IGYTVGGGFDLAMTDDIIMRTEYRYTDFFKQKFANDELKMSV-------QTHNFRLGIAY 294
Query: 241 HF 242
F
Sbjct: 295 KF 296
>gi|114705635|ref|ZP_01438538.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
gi|114538481|gb|EAU41602.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
Length = 228
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/242 (17%), Positives = 75/242 (30%), Gaps = 28/242 (11%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+ +++ +P ++ + D+ + IWSG Y G +
Sbjct: 9 KTTMVLATIALALPLAAMPA--HAQDNASETAFPDSRIPESAPPVAIWSGPYAGTFVGYN 66
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR----- 121
+ G G N+Q V+G+ A D+T
Sbjct: 67 VSRFDNLRGASISGD----GVAGGAYAGFNLQDGSLVYGVEGDVGGAGFDATRRNALGNL 122
Query: 122 -LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
L + ++G + + G VD L+YG GG A S +S+ S
Sbjct: 123 DLSGESNVFGSLRGRVGVDVDPFLVYGTGGLAIAETELSLGGVSDSEAS----------- 171
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+G G++ V I YRY + V + H G+++
Sbjct: 172 VGYTIGAGVEAQVTDSIRTRLEYRYSDFGSSDYD-----LGRTSVSSGFDEHSVRAGVSL 226
Query: 241 HF 242
+F
Sbjct: 227 NF 228
>gi|83308665|emb|CAJ01573.1| outer membrane protein [uncultured bacterium]
Length = 275
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 23/180 (12%)
Query: 54 WSGNYVGLHISRLYETHPLAD-------TINRKTYNS-LLPNGLGIELGHNIQLEDF--- 102
WSG Y+G+ + + + P+ + N +N G +G+N+Q ++
Sbjct: 53 WSGLYLGVQVGYAWGSDPVDEVDVLTPRFANNAFFNLQPKGVLGGAHVGYNLQFTNWNWL 112
Query: 103 -----VFGINCHTTAAKDDSTFYRLKE-----KYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
V G+ + T + G + + G + D LLIYG GG
Sbjct: 113 SSSGVVIGLEGSVDGSSLSGTRTSASGLTMRLRTETQGSLRARIGLAWDRLLIYGTGGAA 172
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
A D+ + + + +G G+DY + + S+ YRY +
Sbjct: 173 FAGFDDNYVTVF--GTPFFVDEQDSKTRTGWTVGGGVDYAITPNWSIGVEYRYSDFGRTT 230
>gi|296447421|ref|ZP_06889346.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
gi|296255041|gb|EFH02143.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
Length = 271
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 74/243 (30%), Gaps = 29/243 (11%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET----------HPLADTIN 77
+ DL + + W+G Y GL+I +
Sbjct: 16 VSSASAADLPSAKAPVAFVEPAPAFTWTGVYAGLNIGYGWSEKQSIAGTVSAAGTPIAFW 75
Query: 78 RKTYNSLLPNGLGIELGHNIQLE--DFVFGINCHTTAAKDDS--------------TFYR 121
+++ G ++G+N Q FV G+ A + F
Sbjct: 76 SFPSSAVDGVLGGGQIGYNRQFAGTSFVVGLEADFRGAGVNGYSNGFGPTNQFGYTPFVN 135
Query: 122 LKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+++ +G V + GY+V L+YG GGF + + D
Sbjct: 136 ARQQLDWFGTVRGRLGYAVAPTLLVYGTGGFAYGGYRATYSGGAVGVPVTVSVSNSD-VR 194
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHI-HSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ G G+++ S Y Y H + + +V + H S G+N
Sbjct: 195 TGWTAGGGVEWAFLPRWSAKVEYLYTELERGHDASYALLGLVANQVGVQNRFHTISAGVN 254
Query: 240 MHF 242
HF
Sbjct: 255 YHF 257
>gi|297248917|ref|ZP_06932626.1| Omp31b [Brucella abortus bv. 5 str. B3196]
gi|297174251|gb|EFH33607.1| Omp31b [Brucella abortus bv. 5 str. B3196]
Length = 176
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 66/176 (37%), Gaps = 17/176 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTF--------YRLKEKYF 127
+ + G++ G+N QL++ V G + + + + K
Sbjct: 8 SGSLDATAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVE 67
Query: 128 IYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
+G V + GY + + L++YG GG V D++ D + LG
Sbjct: 68 WFGTVRARLGYTATERLMVYGTGGLAYGKVK---SAFNLGDDASALHTWSDKTKAGWTLG 124
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G +Y +N + +L + Y Y ++ D ++ K N H +G+N F
Sbjct: 125 AGAEYAINNNWTLKSEYLYTDLGKRNL----VDVDNSFLESKVNFHTVRVGLNYKF 176
>gi|240849916|ref|YP_002971305.1| hemin binding protein A [Bartonella grahamii as4aup]
gi|240267039|gb|ACS50627.1| hemin binding protein A [Bartonella grahamii as4aup]
Length = 288
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 79/293 (26%), Gaps = 67/293 (22%)
Query: 3 FNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLH 62
F +L +++ + + A D+ +PR+ W+G Y+G
Sbjct: 10 FMNIKSLVTTSVIAMAAASAAQAADVIIPRETA-------PAVISAAPSFSWTGFYIGGQ 62
Query: 63 ISRLYETHPLADTINRKTYNSLL------PNGLGIELGHNIQLED-FVFGINCHTTAAK- 114
+ D+ +K GI +G N+ L + + G+ A
Sbjct: 63 VGNFSGKVDEFDSETKKKITDKDWTPKPSGFMGGIYVGSNVDLGNGLILGVETDAVWADR 122
Query: 115 ----------------------------------------DDSTFYRLKEKYFIYGDVVL 134
D K G +
Sbjct: 123 EDSKTHSAVIGETGLAAFKNKLTAAEATFASGKNIDNVTKDGKRVEGTSIKEKWSGATRV 182
Query: 135 KAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG----RFDGHGSSVVLGIGL 189
+ G++ VD +L Y GG + + K E + +G G+
Sbjct: 183 RIGFAAVDRILPYFAGGIAYTQLQVVNSLKAEGADGAEIASAKMFDQSKTMVGFTVGGGV 242
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D+ + ++ L A YRY + K + +G+ F
Sbjct: 243 DFAMTDNVLLRAEYRYSDFGKKAFVKDEDK-------IAYKTNDFRVGVAYKF 288
>gi|13476553|ref|NP_108123.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14027314|dbj|BAB54268.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 218
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 70/234 (29%), Gaps = 27/234 (11%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
V + + A D+ A+ V W+G Y GL++ +
Sbjct: 11 LAVALGLFALGGTAYAADVVQEEPPAPAPVAELPVA-------SWAGPYAGLNVGYGFSG 63
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY 129
+ T + G+ Q E+FV+G + K
Sbjct: 64 RTKEKDFDVST--DTKGFVGSVFGGYQWQQENFVYGGEAELGYNGVKGDDNGINSKAGFE 121
Query: 130 GDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + + GY+V +L+YG GG G + SD + G+G
Sbjct: 122 GSLRARLGYAVTPEILLYGTGGLAGRSLKVEDTVLGVSDRA---------TMLGWTAGVG 172
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D + ++ YRY S + K + + G+ M F
Sbjct: 173 TDIKLTDNVFGRVEYRYTDFGSKSFDGIG--------KVKATDNRVTFGVGMKF 218
>gi|218663696|ref|ZP_03519626.1| outer membrane protein [Rhizobium etli IE4771]
Length = 203
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 69/205 (33%), Gaps = 24/205 (11%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
EA + G W G Y+G + + + + G + G+N
Sbjct: 23 PEAPVAQDAPVKPAGNWEGFYLGGAGTY--------NMGDFGSDRHTYGFGGQVFTGYNW 74
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
Q V+G+ + DD + ++ KY G V + GY ++ L+YG G +
Sbjct: 75 QAGQIVYGVESDLGYSGDDVSSGGVENKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNIK 134
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S + +G G++ V +I+ YRY + +
Sbjct: 135 VS-----------DDTSDESKTAYGYTVGAGVEAFVTNNITTRLEYRYTDYQSKDYD--- 180
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
D R + + LGI + F
Sbjct: 181 --LDSGSFSRGYDENSVKLGIGVKF 203
>gi|27380285|ref|NP_771814.1| hypothetical protein blr5174 [Bradyrhizobium japonicum USDA 110]
gi|27353449|dbj|BAC50439.1| blr5174 [Bradyrhizobium japonicum USDA 110]
Length = 256
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 63/208 (30%), Gaps = 21/208 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSL----LPNGLGIELGHNIQLEDFVFGIN 107
W+G Y+G + + T +G ++G+ Q FV G+
Sbjct: 42 YDWTGFYIGANGGWGQSRGCVDFVTLAGTVAGGCASRSGGLVGGQIGYRWQTNQFVLGLE 101
Query: 108 CHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
A +T L K G + G++ ++ L+Y GG +
Sbjct: 102 AQGDWADIKNTRVSLIDPLLSTTGKTDGIGLFTAQLGWAWNASLLYVKGGAAVTHNRLDV 161
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN--- 217
+ +A LG+G +Y + S+ Y ++ + +
Sbjct: 162 FNNLTGVGLDSA----SHTRWGGALGVGWEYGFAPNWSVGVEYDHLWMGNDNRTFAGAGV 217
Query: 218 ---AKSDVERVDRKGNAHIASLGINMHF 242
+ + + ++ +N F
Sbjct: 218 LSPGGVTLLGDRVSQDVDMVTVRLNYRF 245
>gi|319957414|ref|YP_004168677.1| porin [Nitratifractor salsuginis DSM 16511]
gi|319419818|gb|ADV46928.1| porin [Nitratifractor salsuginis DSM 16511]
Length = 220
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 68/209 (32%), Gaps = 23/209 (11%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLED- 101
V WSG YVGL ++ + ++ G G+ G+N LE+
Sbjct: 25 VPVAPAPADSWSGFYVGLQAGGIWGNADVNIPAYPSNFSLDPDGFGGGVYAGYNWLLEND 84
Query: 102 FVFGINCHTTAAKDDS-------TFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGG 153
F+ G+ D + K + ++L+ G +D + Y GG
Sbjct: 85 FLIGLEVAGNFISADDEGLSGGMGGEKYKVEQNWDAAILLRIGKVIDDTWMPYVTGGVAW 144
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ S + G + +G G++ + +I YRY +
Sbjct: 145 TELETSYI-------PDGGWGSKKDTVNGWTIGAGVEMKLTTNIHARIEYRYTDYDTAQF 197
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + N + +GI+ F
Sbjct: 198 VHAG------PSNVDYNDNRVMVGISYRF 220
>gi|260469600|ref|ZP_05813765.1| OmpA domain protein transmembrane region-containing protein
[Mesorhizobium opportunistum WSM2075]
gi|259028626|gb|EEW29937.1| OmpA domain protein transmembrane region-containing protein
[Mesorhizobium opportunistum WSM2075]
Length = 217
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 71/234 (30%), Gaps = 28/234 (11%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
V + + A D+ A+ V W+G Y G+++ +
Sbjct: 11 LAVALGLFALGGTAYAADVVQEEPPAPAPVAELPVA-------SWAGPYAGINLGYGFSG 63
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY 129
+ +T + G+ Q E+FV+G + K
Sbjct: 64 RTKEKDLGFET--DTKGFVGSVFGGYQWQQENFVYGGEAELGYNGVKGDDNGVHSKGGFE 121
Query: 130 GDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + + GY+V +L+YG GG G + + G G+G
Sbjct: 122 GSLRARLGYAVTPEILLYGTGGLAGRSLKVED----------DTFGSDTATMLGWTAGLG 171
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D + ++ YRY S +N K + + G+ M F
Sbjct: 172 TDIKLTDNVFGRVEYRYTDFGSKSFDNIG--------KVKATDNRVTFGLGMKF 217
>gi|86358535|ref|YP_470427.1| outer membrane protein [Rhizobium etli CFN 42]
gi|86282637|gb|ABC91700.1| outer membrane protein [Rhizobium etli CFN 42]
Length = 208
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 58/190 (30%), Gaps = 21/190 (11%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA 112
WSG Y+G+ + + G G+N Q ++ V GI +
Sbjct: 39 WSGPYLGIDGGASWLNGDFS-AGGASDSQDFNGGVFGAFAGYNFQFDNNIVVGIEGNLEY 97
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
++ G V + GY+ D L+YG G
Sbjct: 98 NWNEEEALGADVGTDWAGAVRGRVGYAFDRALLYGAAG----------WTATRGYVDLPG 147
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ + +G G+D+ + +I YRY D+ VD N H
Sbjct: 148 SDKETETFNGYTVGAGVDFAITNNIFARGEYRYNDFGEK---------DILGVDVDLNQH 198
Query: 233 IASLGINMHF 242
GI + F
Sbjct: 199 ELKFGIGVKF 208
>gi|298292422|ref|YP_003694361.1| porin [Starkeya novella DSM 506]
gi|296928933|gb|ADH89742.1| porin [Starkeya novella DSM 506]
Length = 203
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 68/215 (31%), Gaps = 30/215 (13%)
Query: 30 LPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL 89
P + Y W+G Y+G + + + +
Sbjct: 17 TPAAAADLSYPPPVAAYAPAPVFTWTGFYIGANAGYGFGEADFS--------GDIDGFIG 68
Query: 90 GIELGHNIQL--EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G++ G+N Q V G+ A S+ + L +G V + GY+ D L+YG
Sbjct: 69 GLQAGYNWQGAGSPLVLGVETDFQYADVSSSVFSL----DYFGTVRARVGYAFDQFLVYG 124
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GGF L D + +G G +Y + + S+ Y Y+
Sbjct: 125 TGGFAYGAGSYELLGLTN-----------DRNHFGWTVGAGAEYALGNNWSVKGEYLYLD 173
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ DV +++ G+N F
Sbjct: 174 MGEETYATFTGPRDVG-----LTSNVIRAGVNYRF 203
>gi|260460749|ref|ZP_05808999.1| outer membrane protein [Mesorhizobium opportunistum WSM2075]
gi|259033326|gb|EEW34587.1| outer membrane protein [Mesorhizobium opportunistum WSM2075]
Length = 221
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 68/197 (34%), Gaps = 18/197 (9%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINR--KTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
W+G Y G+ + ++ T + +G + Q + V G
Sbjct: 36 DWTGYYAGMQAGYGWGQSDISGTGGGPFSVSPDIGGGFVGGHVAGLWQFDQAVIGAEADL 95
Query: 111 TAAKDDST-----FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ D T L +G V KAGY+VD +L+YG+GG A + S
Sbjct: 96 NYSSVDGTADLGAGNTLGTDVKWFGSVNAKAGYAVDRVLVYGIGGVAFAGIETSQS---- 151
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
A +G G+DY + + A YRY + SN +D
Sbjct: 152 ----AGAAFSETRTNVGWTVGAGVDYALTDKFVVGAQYRYYDFGSEHFDGSNGFADR--- 204
Query: 226 DRKGNAHIASLGINMHF 242
D+ + + ++ F
Sbjct: 205 DQDTKLNTVGVNLSYKF 221
>gi|15420180|gb|AAK97312.1|AF308170_1 Pap31 [Bartonella henselae phage 60457]
Length = 240
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 72/248 (29%), Gaps = 63/248 (25%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P + W+G Y+G + + D
Sbjct: 1 IALISASAAQAADVIVPH--------EVAPTVISAPAFSWTGFYIGGQVGNFSSKVEITD 52
Query: 75 T------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST--------- 118
++ GI G N+ L + + G+ A +
Sbjct: 53 PNKKDKLFSKDDTPKPSGFMGGIYAGSNMSLGNNMILGVETDAVWADREDAKTSSAKVIR 112
Query: 119 ---------------------------------FYRLKEKYFIYGDVVLKAGY-SVDSLL 144
L K G ++ G+ + D ++
Sbjct: 113 EDELANFKDSLKNANAVFAKDKTSDDVKQDEKHTDSLALKEKWSGATRVRIGFTAADRIM 172
Query: 145 IYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
Y GG A V S KV +++ + LG G+D+ + ++ L
Sbjct: 173 PYVAGGVSYAQVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDFAMTDNVLL 232
Query: 200 SASYRYIP 207
A YRY
Sbjct: 233 RAEYRYSD 240
>gi|46202723|ref|ZP_00052712.2| COG3659: Carbohydrate-selective porin [Magnetospirillum
magnetotacticum MS-1]
Length = 693
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 69/238 (28%), Gaps = 44/238 (18%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP--------- 71
+ DL P D + +G W+G Y G S
Sbjct: 7 TGAHGADLATPTPHDATHL---------PSFGTWAGGYTGWQGSAGDAFGDFGFGSGMIG 57
Query: 72 --------LADTINRKTYNSLLPNGLG-IELGHNIQLEDFVFGINCHTTAAKD------- 115
D R LG + G+ Q+ FV+G+ A
Sbjct: 58 RRSVPEFRTGDATGRNDAGRNATTALGGLFGGYAWQIGPFVYGVEADVDATNLKRPVSST 117
Query: 116 ---------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
D F ++ K ++G + GY+ + L+Y G GA V + +
Sbjct: 118 TPGFGFEGLDPAFPVIRAKADVFGTARARVGYAFERYLVYASFGLAGAQVRFLT-NFPDP 176
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ R LG G++Y + ++L YRY+ + V
Sbjct: 177 ATTSAPALRRGRAFLGFSLGAGIEYAITEHLALGLEYRYLDLGRSGRLDLGTVPGVTG 234
>gi|154246408|ref|YP_001417366.1| porin [Xanthobacter autotrophicus Py2]
gi|154160493|gb|ABS67709.1| porin [Xanthobacter autotrophicus Py2]
Length = 250
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 30/230 (13%), Positives = 56/230 (24%), Gaps = 30/230 (13%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNG 88
W+G Y+G ++ + T +
Sbjct: 25 TKYPVKAVAVVPVFSWTGFYIGANVGYGGDKFTFDEVESYYYGAYPYYANSTSLNSSGFF 84
Query: 89 LGIELGHNIQL-EDFVFGINCHTTAAKDDST--------------FYRLKEKYFIYGDVV 133
G ++G+N Q + V G+ + + +G +
Sbjct: 85 AGGQIGYNYQFANNVVLGVETDLQWSGIEGKEDYSSVYIYGGYPYTSSYGASVDYFGTIR 144
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ GY+ D L Y GG S E +G G++Y +
Sbjct: 145 ARIGYAFDRFLPYITGGAAYGKTKVSGSYAGEG----FGSFDSSSTNWGWTVGGGVEYAI 200
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAK-SDVERVDRKGNAHIASLGINMHF 242
+ + Y Y+ + H G+N F
Sbjct: 201 TNNWTFKTEYLYVDLGSTDYTYGSYDGFYTYAGTVDTKFHTLKAGVNYKF 250
>gi|153007477|ref|YP_001368692.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151559365|gb|ABS12863.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 229
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 80/250 (32%), Gaps = 34/250 (13%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
+ L L++V + A D + ++ W G Y+G I
Sbjct: 2 KFRILLGASLLAVVASTGAYAADAIVSQEPAPMAAPA----------FSWGGAYIGGEIG 51
Query: 65 RLYETHPLAD-TINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTA---------- 112
+ L D + ++ G+ G+N + + V G++ +
Sbjct: 52 WGWGRAKLDDKSTDQSNEFKPNGFIGGVYAGYNFDMGNNVILGVDGNFDYNDLKKSHDYI 111
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ ++ + K G V +AGY+VD + Y GG V +S N +
Sbjct: 112 SNSNAVQTSAETKLQWSGAVRARAGYAVDRFMPYIAGGVAFGGVKNSL-------NVGGS 164
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
D + +G G+DY ++ L YRY + N +
Sbjct: 165 DYNNDKTLTGWTVGTGVDYAATDNVLLRLEYRYTDFGNKDFDLGNTA-----TRGSFKTN 219
Query: 233 IASLGINMHF 242
LG+ F
Sbjct: 220 DIRLGVAYKF 229
>gi|312113967|ref|YP_004011563.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311219096|gb|ADP70464.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 294
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 85/248 (34%), Gaps = 55/248 (22%)
Query: 48 DDEYGIWSGNYVGLHISRLYET----------HPLADTINRKTYNSL---LPNGLGIELG 94
+W+G YVG H+ + P + T +R YN G+ +G
Sbjct: 37 APPPPLWTGFYVGAHLGGGWTDFDLGRNSYYYWPTSTTYDRYDYNGGLSGTGIFGGLTIG 96
Query: 95 HNIQLE---DFVFGINCHTTAAKDD------------------STFYRLKEKYFIYGDVV 133
+N Q ++V+GI +DD ST R K YGD+
Sbjct: 97 YNWQFGQCCNYVYGIELDIGGWRDDASKTIYIDDDRRGLDPDASTRIRFTNKGGFYGDIT 156
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK-----NAKGRFDGHGSSVVLGIG 188
+ GY+ + LIY GGF E+ + ++ + +G G
Sbjct: 157 GRIGYAAGNTLIYAKGGFAWLNNSFRVGVLRENGATGYNYDWSSTTDNGNTLAGWTVGGG 216
Query: 189 LDYMVNYDISLSASYRYIPHHIHS------VNNSNAKSDVERVDR----------KGNAH 232
L+Y NY+ S+ A Y Y + + N S + +R A+
Sbjct: 217 LEYKWNYNWSVKAEYLYFNFGEPNVGGNCCYDYRNGISADAQTERRYSADFKNLSDLTAN 276
Query: 233 IASLGINM 240
LG+N
Sbjct: 277 SVKLGVNY 284
>gi|323137480|ref|ZP_08072557.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242]
gi|322397106|gb|EFX99630.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242]
Length = 722
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 65/252 (25%), Gaps = 58/252 (23%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPL--------------------ADTINRKTYNSLLPNG 88
W+G Y G + + + A + + L
Sbjct: 41 PSVFTWTGLYAGANFGHAWASKNAIGLRSTNLVDLTTIGFGPASALSASGVADARLNGLF 100
Query: 89 LGIELGHNIQLE-DFVFGINCHTTAAKDDS-------------------TFYRLKEKYFI 128
G ++G+N Q FV G+ A D T L+
Sbjct: 101 AGGQVGYNWQFAKQFVVGVEADIQGASVDGGGGLANVAAARLAPPAWAVTSASLRRNLEY 160
Query: 129 YGDVVLKAGYSVDSLLI-YGMGGFGGAYVI----DSSLEKVESDNSKNAKGRFDGHGSSV 183
+ + GY+ L+ Y GG + +G G+
Sbjct: 161 IATLRGRFGYAATPTLLLYATGGIAHGRARAGIELEQSLTSSDFDDAEVEGEHYGNLMGF 220
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN-------------AKSDVERVDRKGN 230
V+G GL+ +S Y Y + V R+ + N
Sbjct: 221 VIGGGLEAAFGRHVSGKLEYLYYDLGTLRLGTPRIDRLAYFNSASMIDLLAVTRLSTRFN 280
Query: 231 AHIASLGINMHF 242
H+ G+N F
Sbjct: 281 GHLLRAGVNYRF 292
>gi|15420176|gb|AAK97310.1|AF308168_1 Pap31 [Bartonella henselae phage 60457]
Length = 245
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 73/252 (28%), Gaps = 63/252 (25%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L ++++ + + A D+ +P + W+G Y+G +
Sbjct: 1 LMTTSVIALISASAAQAADVIVPH--------EVAPTVISAPAFSWTGFYIGGQVGNFSS 52
Query: 69 THPLADT------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK------- 114
+ D ++ GI G N+ L + + G+ A
Sbjct: 53 KVEITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTS 112
Query: 115 -----------------------------------DDSTFYRLKEKYFIYGDVVLKAGY- 138
D L K G ++ G+
Sbjct: 113 SAEAIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRIGFT 172
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ D ++ Y GG A V S KV +++ + LG G+D+ +
Sbjct: 173 AADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGVDFAM 232
Query: 194 NYDISLSASYRY 205
++ L A YRY
Sbjct: 233 TDNVLLRAEYRY 244
>gi|85715155|ref|ZP_01046139.1| putative outer membrane protein [Nitrobacter sp. Nb-311A]
gi|85698070|gb|EAQ35943.1| putative outer membrane protein [Nitrobacter sp. Nb-311A]
Length = 236
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 62/203 (30%), Gaps = 20/203 (9%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFG 105
W+G YV L S G++ G + Q +V G
Sbjct: 37 PQQAVYNWTGFYV---------GGHLGGAFGGGLGGSDGRFLGGVQGGADYQFANQWVLG 87
Query: 106 INCHTTAAK------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+ + + G V + GY L+Y GG+ D
Sbjct: 88 VEAQYSWLANYRGDVAFPGGSVVTGGNSGLGSVTGRLGYVWGPTLLYAKGGYAF---RDG 144
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+L + A S +G GL+YM + S A Y+Y + + +
Sbjct: 145 ALGVTNAAGVPQAFTATGNRDSGYTVGAGLEYMFAPNWSAKAEYQYYNFGKTTF-GAGSP 203
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+DV + + H G+N F
Sbjct: 204 ADVVGASFRNDEHTVKAGVNYRF 226
>gi|148258659|ref|YP_001243244.1| OmpA domain-containing protein [Bradyrhizobium sp. BTAi1]
gi|146410832|gb|ABQ39338.1| putative outer membrane protein with ompA domain [Bradyrhizobium
sp. BTAi1]
Length = 662
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 53/208 (25%), Gaps = 25/208 (12%)
Query: 48 DDEYGIWSGNYVGLHISRL--YETHPLADTINRKTYNS-LLPNGLGIELGHNI-QLEDFV 103
WSG YVG H + L D I S G++ G+N +
Sbjct: 38 AQTVFDWSGIYVGAHAGYTRDHAQASLIDPIGGAGAGSRFSGLTGGVQAGYNWVTRSGLL 97
Query: 104 FGINCHTTAAKD----------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
G + + + E + + GY+ L+Y GG
Sbjct: 98 LGFEGDFSFPNSLTSNHTVAMLNRPGSSVSELWDYVASARGRIGYAQGDWLVYATGGLAW 157
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + G G++ S Y Y V
Sbjct: 158 TGGRFINTTAAGDEKLLT-------TRVGWTAGAGIERAFAPHWSWRLEYLYSQFENGGV 210
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMH 241
SN S ++ +G+N
Sbjct: 211 RFSNGASYTSTLE----FQTLRVGLNRK 234
>gi|118581633|ref|YP_902883.1| OmpA domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118504343|gb|ABL00826.1| OmpA domain protein transmembrane region-containing protein
[Pelobacter propionicus DSM 2379]
Length = 230
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 70/213 (32%), Gaps = 20/213 (9%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTIN-RKTYNSLLPNGLGIELGHNIQL----- 99
D+ W+G Y G++ + + K + + +G +G N+Q
Sbjct: 22 AADNAPHNWTGFYAGINGGYGWGETQWDYVGSTGKADHHINGGLIGGTMGANLQFFAYQG 81
Query: 100 --EDFVFGINCHTTAAKDDSTF------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
V G+ A +R K V + G + D L I+G GG
Sbjct: 82 GIPAVVGGVESDFDWADLGDDGPCPNPRFRAKSSIDALATVRGRLGLAFDRLFIFGTGGL 141
Query: 152 GGAYVIDSSLEKVESD--NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
A +++ + S AK + V+G+G +Y V ++S Y+Y
Sbjct: 142 AVAKTDVETVDTWGTSVPPSGTAKNGEGKWKTGYVVGVGAEYAVWKNLSFKVEYQYYDLG 201
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N V I GIN F
Sbjct: 202 RSTYRVDNDIPVKAGVRGD----IIRTGINYTF 230
>gi|154246283|ref|YP_001417241.1| porin [Xanthobacter autotrophicus Py2]
gi|154160368|gb|ABS67584.1| porin [Xanthobacter autotrophicus Py2]
Length = 236
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 57/216 (26%), Gaps = 32/216 (14%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
W+G Y+G + + + + G + G+N
Sbjct: 42 PTQPAIPAAVPAPVFSWTGFYIGGNAGYGWGSGQDELGVAGV---DPKGWFGGGQAGYNY 98
Query: 98 QL-EDFVFGINCHTTAAKDDSTFYRL----------KEKYFIYGDVVLKAGYSVDSLLIY 146
Q + V GI ++ +G V + GY+ +L Y
Sbjct: 99 QFSNNIVAGIEADIQGGDIGASASGPLGGQLGVLGLSSTLDSFGTVRGRLGYAFGPILPY 158
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
GGF L + G G++Y + + Y Y
Sbjct: 159 VTGGFAWGNNSIDYLG-----------ASQSQTHTGWTAGAGIEYALTDHWTAKTEYLYT 207
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ A + V A A +GIN F
Sbjct: 208 DLGSKFYDTLGASAGVT-------AQTARIGINYKF 236
>gi|146340933|ref|YP_001205981.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193739|emb|CAL77756.1| putative outer-membrane protein; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 251
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 80/243 (32%), Gaps = 21/243 (8%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
++ SLA+ L DL WSG Y+GL+ +
Sbjct: 4 LLLGATTSLALGLAPAIAADLPARTFTKAPGMIATIYDWSGFYLGLNAGGGSARTCWTNN 63
Query: 76 --------INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR------ 121
N + + G ++G+ Q +VFG+ A +
Sbjct: 64 VTVGGVAATNAEGCHDATGALAGGQIGYRWQAGSWVFGVEGQGNWANLKGSNTSQLAPAV 123
Query: 122 -LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ K G + + GY+ +++L Y GG A + L A +
Sbjct: 124 TNQTKVNGVGLLTGQIGYAWNNVLWYVKGGAAVAGEKYNGLATATG----TAFDQASATR 179
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD--RKGNAHIASLGI 238
+G G++ + S+ A Y +I ++N S + + +A +A++ +
Sbjct: 180 WGATVGTGVEVGFAKNWSVGAEYEHIFMGNKNLNFSGIPAGAATRNDTVGQDADMATVRV 239
Query: 239 NMH 241
N
Sbjct: 240 NYR 242
>gi|13474724|ref|NP_106293.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14025479|dbj|BAB52079.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 205
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 66/205 (32%), Gaps = 24/205 (11%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ 98
AD + Y D WSG YVG+H + T + G++ G+N Q
Sbjct: 24 AADLSPTYNDPPAFQWSGAYVGVHGGTAF-------TGMPNPFAGRNGFSGGVQAGYNQQ 76
Query: 99 LEDFVFGINCHTTA-AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ V G + + K K G KAG S D L++G GG
Sbjct: 77 MGPTVLGAEIEGSYLGGAEHDVQGGKIKEKWRGAAKAKAGLSFDQTLLFGTGGVALTKF- 135
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + DG +LG G++ +S Y Y+ ++
Sbjct: 136 ----------DKGDNVSSADGWKVGYLLGAGIEQGFAGGLSAKVEYDYVRTLGVETTSAL 185
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
S +H GIN F
Sbjct: 186 GTSKTT-----IGSHELKAGINYRF 205
>gi|323136580|ref|ZP_08071661.1| FecR protein [Methylocystis sp. ATCC 49242]
gi|322397897|gb|EFY00418.1| FecR protein [Methylocystis sp. ATCC 49242]
Length = 438
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 14/200 (7%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ-LEDFVFGINCHTT 111
W G +G ++ AD + + G++LG+N Q L + V G
Sbjct: 231 NWGGLSIGFNVGTAIGNAEFADPVPMNG----VGFLGGLKLGYNWQVLPNIVAGFETDAE 286
Query: 112 A-----AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV---IDSSLEK 163
+ + G + GY+ + L+YG GG ++ S
Sbjct: 287 YRSEIGGSTNGHGTVSSTRGGYLGTFRGRLGYAFNRWLVYGTGGLAYGHIIAPRTFSGAN 346
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH-HIHSVNNSNAKSDV 222
+ + + + +G G+ + + +IS+ A Y Y+ H + +N
Sbjct: 347 LLGPAYAFGTSQNNPFLAGWTVGGGVQFALTSNISVKAEYLYVKLQHDYPTYATNVALYP 406
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ H G++ F
Sbjct: 407 VPICNMSGLHSIRAGVSYGF 426
>gi|146337818|ref|YP_001202866.1| putative outer membrane protein A-like (OmpA-like) [Bradyrhizobium
sp. ORS278]
gi|146190624|emb|CAL74626.1| Conserved hypothetical protein; putative outer membrane Protein
A-like (OmpA-like) [Bradyrhizobium sp. ORS278]
Length = 673
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 58/208 (27%), Gaps = 24/208 (11%)
Query: 48 DDEYGIWSGNYVGLHISRL--YETHPLADTIN-RKTYNSLLPNGLGIELGHNI-QLEDFV 103
W+G YVG H + + L+D + G++ G+N +
Sbjct: 48 AQTVFDWTGLYVGAHAGYTRDHASATLSDPTGVASAGSRFNGLTGGVQAGYNWVTRSGLL 107
Query: 104 FGINCHTTA----------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
G+ + A + + E + + GY+ L Y GG
Sbjct: 108 LGLEGDFSFPNYLTSNHTVAMLGTPGASVSELWDYVATARGRVGYANGDWLAYATGGVAW 167
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + + + V G G++ D S Y Y V
Sbjct: 168 TGGRFINTDPAGNTEKRLT------TRLGWVAGAGIERAFAPDWSWRLEYLYYGFENGGV 221
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMH 241
N S + + +G+N
Sbjct: 222 RFGNGASYNSAL----DFQTLRVGLNRK 245
>gi|75675529|ref|YP_317950.1| putative outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74420399|gb|ABA04598.1| putative outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 241
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 68/219 (31%), Gaps = 24/219 (10%)
Query: 31 PRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG 90
PR W+G Y+ L S G
Sbjct: 25 PRPYTKAPVPYT----PPQAVYNWTGFYI---------GGHLGGAFGGDLGGSDGRFLGG 71
Query: 91 IELGHNIQL-EDFVFGINCHTTAAK------DDSTFYRLKEKYFIYGDVVLKAGYSVDSL 143
++ G + Q ++V GI + + G V + GYS
Sbjct: 72 VQGGADYQFANNWVLGIEAQHSWLANYRENVAFPGGSVVTGGNSGLGSVTGRLGYSWGPT 131
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
L+Y GG+ D +L ++ + A S +G GL+YM + S A Y
Sbjct: 132 LLYAKGGYAF---RDGALGVTDAAGAPQAFTTTGNRNSGYTVGAGLEYMFAPNWSAKAEY 188
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y + + + +DV + + H G+N F
Sbjct: 189 QYFNFGRTTF-GAGSPADVVGASFRNDEHTVKAGVNYRF 226
>gi|332717162|ref|YP_004444628.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
gi|325063847|gb|ADY67537.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
Length = 223
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 18/206 (8%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
+ V W G YVG + + T T + G+N
Sbjct: 35 DIPAAPVVNDVAPAFSWDGVYVGASAGYGWNRVK-STTFGVTTKHEFDGGRFSGFAGYNA 93
Query: 98 QL-EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
++ + G+ A D T + + G L+AGY++D LIY G+
Sbjct: 94 EVAPSIILGVEGDLGYAWGDKTIVTSEVSAGLNGSARLRAGYAIDRALIYTAAGY----- 148
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
K G +G G+DY ++ YRY + +
Sbjct: 149 ------TATDSEVKAPFGEDSKVLHGWTVGAGVDYAFTNNLFGRVEYRYNDFGKATYHTG 202
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
S + H+ +G+ + F
Sbjct: 203 PITSTG-----DVSEHVVKVGLGVKF 223
>gi|148255878|ref|YP_001240463.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146408051|gb|ABQ36557.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 257
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 74/216 (34%), Gaps = 22/216 (10%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYE----------THPLADTINRKTYNSLLPNGLGIELG 94
WSG YVG + + +NR+ + +G ++G
Sbjct: 38 PAVVATVYDWSGFYVGFNAGGGSSRDCWNLVQNANVVVNPALNREGCSGGGGAAVGGQVG 97
Query: 95 HNIQLEDFVFGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYG 147
+ Q+ ++VFG+ A T L + + +G + GY+ D++L Y
Sbjct: 98 YRYQMANWVFGVEAQGDWANFKGTNRNLILPNVSDRSRTNGFGLFTGQVGYAFDNILGYI 157
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GG + + R + +G GL+Y + S+ Y +I
Sbjct: 158 KGGAAVVGDRYDTFTTNTNVMLD----RANTTRWGGTIGAGLEYGFAPNWSVGVEYDHIF 213
Query: 208 HHIHSVNNSN-AKSDVERVDRKGNAHIASLGINMHF 242
++N N A + K + I + +N F
Sbjct: 214 LGNKNLNFVNAAGAPAMTHRIKQDVDIGLVRLNYKF 249
>gi|85714944|ref|ZP_01045929.1| outer membrane autotransporter barrel protein [Nitrobacter sp.
Nb-311A]
gi|85698141|gb|EAQ36013.1| outer membrane autotransporter barrel protein [Nitrobacter sp.
Nb-311A]
Length = 654
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 66/213 (30%), Gaps = 22/213 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRK-TYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
W+G Y+G L + + T G ++G++ Q+ +V G+
Sbjct: 432 YNWTGLYIGASAGVLNGRNDWSFPGLGTRTNPRYAGFAGGGQIGYDWQIGTWVVGLEGSL 491
Query: 111 TAAKDDST-------FYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLE 162
+ FY + + G K GY+ + L+Y GG +
Sbjct: 492 MGSNARGARSCPNALFYTCENEMNWLGTATAKLGYTIWNRSLVYLRGGAAFGNTRIVTNC 551
Query: 163 KVESDNS------------KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
D + +G+G ++ + ++ A Y
Sbjct: 552 NTGPDRGYIDYSIPAVIAQPGCGANSSKTAAGWTVGLGTEFALTRSWTVRAESNYFDLGT 611
Query: 211 HSVNNSNAKS-DVERVDRKGNAHIASLGINMHF 242
+ + ++D N I+++G+N F
Sbjct: 612 ERYSLAQGGGIPPLQIDTHNNGFISTIGLNYRF 644
>gi|319785546|ref|YP_004145022.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171434|gb|ADV14972.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 205
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 66/205 (32%), Gaps = 24/205 (11%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ 98
AD + Y D WSG YVG+H + T + G + G+N Q
Sbjct: 24 AADLSPAYNDPPAFQWSGAYVGVHGGTAF-------TGMPNPFAGRNGLSGGFQAGYNQQ 76
Query: 99 LEDFVFGINCHTTA-AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ V G + + K K G KAG S D L++G GG
Sbjct: 77 MGPAVLGAEIEGSYLGGAEHDVRGGKIKEKWRGAAKAKAGLSFDQTLLFGTGGVAMTKF- 135
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + DG ++G G++ +S Y Y+ ++
Sbjct: 136 ----------DKGDKVNGIDGWKLGYLVGGGIEQGFAGGLSAKVEYDYVRTPGVETTSAL 185
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
KS +H GIN F
Sbjct: 186 GKSKAT-----IGSHELKAGINYRF 205
>gi|323137952|ref|ZP_08073026.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
gi|322396671|gb|EFX99198.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
Length = 302
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/292 (16%), Positives = 83/292 (28%), Gaps = 67/292 (22%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
V ++ + A DL + L E E W+G Y+GL+ +
Sbjct: 7 SAVLTLSLIGGGAFAADLSSHKLPPLP-------ELPAMETTPWAGFYIGLNAGGAWNAS 59
Query: 71 PLADTINRKTYNSLL-----------------------PNGLGIELGHNIQLE-DFVFGI 106
+ ++ + + G +LG+N + F+ G+
Sbjct: 60 TAVNLLSAPVFVAPGIGEEIWAATSSFAASRALSTQAAGFIGGGQLGYNWRFSETFIAGV 119
Query: 107 NCHTTAAKDDSTFYR-------------------LKEKYFIYGDVVLKAGYSVDSLLI-Y 146
+ R ++ G V + GY V L+ Y
Sbjct: 120 EADIQGVAGGANSARNVSLLPTPAAGLSYLTTLSASKRLDYLGTVRGRIGYLVTPTLLAY 179
Query: 147 GMGGFGGAYV-------IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
GG V + + GRF + +G GL++M + D SL
Sbjct: 180 ATGGLAYGGVTARADFFQTIPNDTPGFELLAINAGRFSNTRAGWTVGGGLEWMFSSDWSL 239
Query: 200 SASYRYIPHHIHSVNNSNAKSDVER---------VDRKGNAHIASLGINMHF 242
A Y Y + + + HIA G+N HF
Sbjct: 240 KAEYLYYDLGGVTFPTGVTTDQAFGALIMISNNHASTRFDGHIARAGVNYHF 291
>gi|31322670|gb|AAP22071.1| outer membrane protein [Sinorhizobium fredii]
Length = 212
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 67/203 (33%), Gaps = 22/203 (10%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
A EY D WSG YVG H AD N+ G G+ G+N+Q
Sbjct: 32 AAPAAEYTDPAVKNWSGAYVG---GTANWHHGEADATGG---NTSAGFGGGLYGGYNVQD 85
Query: 100 EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
V+G A +DS + K + G V + G ++ +L+YG G S
Sbjct: 86 GQMVYGGEADVNYAGNDSHSSGRRVKQGVNGSVRGRVGVDLNPVLVYGTAGLALGNAKLS 145
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
G D G G + V +++ YRY +
Sbjct: 146 -----------TPAGSDDKTLVGWTAGAGAETFVTDNVTARVEYRYTDYASKDFRTGG-- 192
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
V + H LG+ + F
Sbjct: 193 ---STVSSGYDEHSVKLGMGVKF 212
>gi|110633591|ref|YP_673799.1| outer membrane protein, 31 kDa [Mesorhizobium sp. BNC1]
gi|110284575|gb|ABG62634.1| outer membrane protein, 31 kDa [Chelativorans sp. BNC1]
Length = 234
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 67/221 (30%), Gaps = 24/221 (10%)
Query: 36 LFNEADNNVEYQDDEYGIWSGNYVGLHISRL-----YETHPLADTINRKTYNSLLPNGLG 90
+ V E W+G Y+G YE P S G
Sbjct: 24 YGDVPAAPVAEVAAESFDWTGLYLGAFGGVSTGDFKYEAGPTGGDPLGGIDISGGGFIGG 83
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDST---------FYRLKEKYFIYGDVVLKAGYSVD 141
++G++ Q+ ++V G A D+ + K G V +AGYS D
Sbjct: 84 AQVGYDWQIGNWVIGGVADIAATNHDADISADIDGFGSAEAESKLKYLGTVRARAGYSFD 143
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
L+YG GGF D + G G+++ V IS+
Sbjct: 144 RTLVYGHGGFAYGETEQKI------DLGGTELFNESQGRTGWTAGAGVEFAVTNRISVGT 197
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y Y+ V VD H +N+ F
Sbjct: 198 EYSYVDLGEERVFEDAGVF----VDEDVAFHSVKALLNVRF 234
>gi|300025034|ref|YP_003757645.1| porin [Hyphomicrobium denitrificans ATCC 51888]
gi|299526855|gb|ADJ25324.1| porin [Hyphomicrobium denitrificans ATCC 51888]
Length = 231
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 63/207 (30%), Gaps = 23/207 (11%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCH 109
W+G Y GL + + +D N G +G+N QL V GI
Sbjct: 33 TFDWTGAYAGLQAGYSWSSARYSDDTYLSEAN-PEGFIGGGYIGYNYQLPSRLVLGIEAD 91
Query: 110 TTAAKDDS--------------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
+ D L+ + V + GY+ L Y GG
Sbjct: 92 IVGSGMDGSDGQRYLDDPSVSIAGVELEMETRWSAAVRGRIGYAYGRYLPYIAGGVSFTD 151
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
++ + + + + +G G++Y N + + A YRY N
Sbjct: 152 YEFRWID----HVNATVPFKREQSRTGWNIGTGVEYAANDWVIVRAEYRYTDFGTDHFPN 207
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
A + H LG+ + F
Sbjct: 208 DFAGPY---SKMELQTHDLRLGVGVKF 231
>gi|83308663|emb|CAJ01571.1| outer membrane protein [uncultured bacterium]
Length = 276
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 81/259 (31%), Gaps = 33/259 (12%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT- 75
++ ++A+ DL + A V W+G Y+G + + T + T
Sbjct: 6 LLASVGAIALTGSAAFAADLPSRAPPPVYLPPPPIFTWTGFYIGGQVGGAWGTGGSSFTA 65
Query: 76 -------INRKTYNSLLPNGL--GIELGHNIQLEDF--------VFGINCHTTAAKDDST 118
++ P+G+ G +G + Q+ + V G+ + T
Sbjct: 66 FDAVTGRFVDASFGGGNPSGVIGGGHIGFDYQIPTWNWFSSSGVVIGVEGSVDGSSLSKT 125
Query: 119 -------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS--SLEK 163
F + I G + + G + D +L+Y GG +
Sbjct: 126 TTVTLPGIFLNNGFATARTSADIQGSIRGRLGIAWDRVLVYATGGVAFGGINSDIQVNGV 185
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + + +G G++Y + + S+ A YR+ S + S A
Sbjct: 186 DAAGVPFFGQRNRSNDRTGWTVGGGIEYALTPNWSVGAEYRFTDFGTISRSASLADGSFI 245
Query: 224 RVDRKGNAHIASLGINMHF 242
+ R + F
Sbjct: 246 SLSRTLQENQVQARFTYLF 264
>gi|319408046|emb|CBI81700.1| Outer membrane protein, omp25/ropB family [Bartonella
schoenbuchensis R1]
Length = 273
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 75/288 (26%), Gaps = 69/288 (23%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
L + L++ + A + + W G Y+G +
Sbjct: 2 IRCLIIICALTLFSTSVVRASGYMV---------IQEPMPVFVPSTFSWEGLYLGGQVGG 52
Query: 66 LYETHPLADTINR-------------KTYNSLLPNGLGIELGHNIQLED--FVFGINCHT 110
++ + +L G G N++L+D + ++
Sbjct: 53 ALGKLSVSSRVISGKNTVTKKSQIVSSDKYNLAGFIGGFYAGSNLRLDDNGLILSVDTDI 112
Query: 111 TAAK-------------------------------------DDSTFYRLKEKYFIYGDVV 133
+ D Y K G
Sbjct: 113 VWSNQKNVQFGKRMIVGDQSARVHNALVSRFGHKKSGLVKVGDEVTYNTTRKEKWAGATR 172
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
++ G++ D ++ Y GG V + V S N N LG G+++ V
Sbjct: 173 VRFGFAADRIMPYIAGGIAYTKVQITPWFLVNSANPLNLMTE-KKAMIGYTLGAGVNFAV 231
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ ++ L YRY S V+ + H +G+
Sbjct: 232 SDNVILRGEYRYSDFGKKKFMES-------PVNVSYSTHDLRVGVAYK 272
>gi|85713978|ref|ZP_01044967.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
gi|85699104|gb|EAQ36972.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
Length = 453
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 73/223 (32%), Gaps = 35/223 (15%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHPL--ADTINRKTYNSLLPNGL--GIELGHNIQLE 100
Y W+G Y+G + + ++ +L PNG G ++G+N Q
Sbjct: 233 PYVPMVTANWNGLYLGGNFGGGVGRNRTTISNPAGNLAQFNLAPNGFVGGGQIGYNWQAG 292
Query: 101 DFVFGINCHTTAAKDDSTFYRL----------KEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ VFG+ + + K +G V + GY+V + + Y GG
Sbjct: 293 NIVFGLETDFQGSTLEDNKACFFCVPGASVDFNSKLQWFGTVRGRLGYAVGNSMFYATGG 352
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM-----------VNYDISL 199
F V + + + F + +G G++ + +
Sbjct: 353 FAYGNVQTALNTPLNN-------FSFSNTRTGYAVGGGIETPLPLVNLFGGPLFGPNWTS 405
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ Y Y+ S N + + HI G+N HF
Sbjct: 406 TTEYLYVDLGRSSFNIGGGPNVLTT---GAQEHIFRTGLNYHF 445
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/231 (15%), Positives = 67/231 (29%), Gaps = 26/231 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINR---KT 80
LA + DL Y W+G Y+G++ + T
Sbjct: 10 LASTAMSAQAADLAPRPYTKAPPMAPVY-DWTGLYLGVNAGLGVGRNRAVHDFGPLAIST 68
Query: 81 YNSLLPNGLGIELGHNIQ----LEDFVFGINCHTTAAKDDSTFYR------LKEKYFIYG 130
+ L G ++G+N Q VFG+ A ++ +G
Sbjct: 69 HLQPLGAVGGGQIGYNWQTNSFFGPIVFGVEADLQGADMTDNRTNFIGALQYNQRLNWFG 128
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ G ++ Y GG+ V + + F G S G G++
Sbjct: 129 TARGRVGLVNGPMMTYLTGGWAYGNVGTTVI-------QGGVPSAFGGGRSGWTWGSGVE 181
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + + Y Y+ + + + + +I G+N
Sbjct: 182 AALGGNWTGKIEYLYLDLGNRT-----DFIGGQALHSELRENIFRAGLNYR 227
>gi|39936789|ref|NP_949065.1| hypothetical protein RPA3728 [Rhodopseudomonas palustris CGA009]
gi|39650646|emb|CAE29169.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 670
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 64/214 (29%), Gaps = 29/214 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKT-----------YNSLLPNGLGIELGHNIQ 98
WSG Y+G H S + + T + + +G++ G+N
Sbjct: 35 AVFDWSGFYIGAHFSAVAGHSNWSSTPAGGSGSIDLFDAFQLFKGTGSYVIGLQAGYNWM 94
Query: 99 LED-FVFGINCHTTAAKD----------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
L ++ GI + T + + G V + GY+ D L Y
Sbjct: 95 LPSRWLIGIEADLNSPNTLGGNTGNTLPSGTVGGHDHQALLGGTVRGRVGYAFDGWLPYV 154
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GF +Y + A G G+D ++ S A Y
Sbjct: 155 TAGFAWSYDRLRWPPDPSLAQQETALL----WRLGWAAGAGVDVPLSPAWSARAEYLATG 210
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+V+ A + V H LG+N
Sbjct: 211 FGSGTVSFPIAG---QSVSSDVLTHAVRLGLNYR 241
>gi|192292615|ref|YP_001993220.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris
TIE-1]
gi|192286364|gb|ACF02745.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris
TIE-1]
Length = 670
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 64/214 (29%), Gaps = 29/214 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKT-----------YNSLLPNGLGIELGHNIQ 98
WSG Y+G H S + + T + + +G++ G+N
Sbjct: 35 AVFDWSGFYIGAHFSAVAGHSNWSSTPAGGSGSIDLFDAFQLFKGTGSYVIGLQAGYNWM 94
Query: 99 LED-FVFGINCHTTAAKD----------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
L ++ GI + T + + G V + GY+ D L Y
Sbjct: 95 LPSRWLIGIEADLNSPNTLGGNTGNTLPSGTVGGHDHQALLGGTVRGRVGYAFDGWLPYV 154
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GF +Y + A G G+D ++ S A Y
Sbjct: 155 TAGFAWSYDRLRWPPDPSLAQQETALL----WRLGWAAGAGVDVPLSPAWSARAEYLATG 210
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+V+ A + V H LG+N
Sbjct: 211 FGSGTVSFPIAG---QSVSSDVLTHAVRLGLNYR 241
>gi|118593217|ref|ZP_01550602.1| outer membrane protein [Stappia aggregata IAM 12614]
gi|118434108|gb|EAV40764.1| outer membrane protein [Stappia aggregata IAM 12614]
Length = 251
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 72/238 (30%), Gaps = 32/238 (13%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+ + V+ + A DL + +W+G Y+G
Sbjct: 41 LVLCAVLGVLVVGANAADLDTYETPLYAPTPQS----------LWAGPYLGFEGGVSQTV 90
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD-----STFYRLKE 124
L K ++ + G+ G+N ++ FV G+ T ++
Sbjct: 91 TELKSGGRTKDFSRVD-AAFGLFGGYNWEVSRFVLGVEGGAAYLGAREKGTHPTLGAIET 149
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
+ + G + +++ Y G + K + V
Sbjct: 150 GSKWTINAKARVGMPIKNVMPYLSLGIA-----------ATEHSLKANGTERNSVSVGPV 198
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
LG G++ V L A Y + + + A+ +VD+ H +G++ F
Sbjct: 199 LGGGVEVAVMDAWHLRADY-----SLTGILDETARFGGTKVDQTAGNHRLMIGLSRSF 251
>gi|146340936|ref|YP_001205984.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193742|emb|CAL77759.1| putative outer-membrane protein, putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 217
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 62/198 (31%), Gaps = 30/198 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G T + S G +G+N Q +V+G+ A
Sbjct: 41 WAGFYLGAFGGYA--------TTDNGGVLSPKGGFAGGTIGYNWQSGAWVYGLEADAAWA 92
Query: 114 KDDSTFYRL---------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ + K G + GY+ +++L+YG GG+ A +
Sbjct: 93 DIKDSVGGVVPGFGAVGIASKIDATGTARGRVGYAFNNVLLYGTGGYAWANNKITLSAL- 151
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
S G G++ + S+ A Y Y + +
Sbjct: 152 ------GVGVSDTQFLSGWTAGGGVEVLFAPKWSVKAEYLYKSFDGKTYFGGALPTGN-- 203
Query: 225 VDRKGNAHIASLGINMHF 242
N H +G+N HF
Sbjct: 204 ----LNLHSVQVGVNYHF 217
>gi|296444784|ref|ZP_06886747.1| hypothetical protein MettrDRAFT_0463 [Methylosinus trichosporium
OB3b]
gi|296257732|gb|EFH04796.1| hypothetical protein MettrDRAFT_0463 [Methylosinus trichosporium
OB3b]
Length = 1115
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 80/297 (26%), Gaps = 60/297 (20%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
Y L V IV + ++ L + E +W+G + GL+
Sbjct: 13 YQELRSVELKRIVASVAAYSLFCPLGAGSAIAAEPSAAKSAGAASPPMWTGFHAGLNGGY 72
Query: 66 LYETHPLA---------------------------DTINRKTYNSLLPNGLGIELGHNIQ 98
+ + A D ++ G++LG++
Sbjct: 73 GWSSDTKAQLTVTPLEPPLLYVPPDRVPPSDNFARDATRSIARSASGAFIGGLQLGYDWA 132
Query: 99 LE-DFVFGINCHTTAAKDD---------STFYRLKEKYFIYGDVVLKAG-YSVDSLLIYG 147
+V G+ + ST + + G + + G + SLL+YG
Sbjct: 133 FGERYVVGVEADFQGSVGGHGEATTYSPSTVFVTANQLDYLGTLRGRLGVLATPSLLVYG 192
Query: 148 MGGFGGAY--VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
G + + + D G G+++M + SL A Y +
Sbjct: 193 TAGAAYGGPATRTQITQPGAGVFGGYGESQTDRTRLGWAAGAGVEWMFDPKWSLKAEYLH 252
Query: 206 IPHHIHSVNNSNAKSDVERVDRKG--------------------NAHIASLGINMHF 242
+ + + N HI G+N HF
Sbjct: 253 YDLGSIGGHTLYGMAGGMALSVGDPLADPVIPYAYLAGRPRTPINGHILRAGVNYHF 309
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 71/255 (27%), Gaps = 47/255 (18%)
Query: 32 RKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINR------------- 78
+ L E D + W YVG+++ + +
Sbjct: 858 ELMGLAREPDKQPKAPPPS---WQDIYVGVNLGGAFANARTSVATAPTSSAAPSAPVAAA 914
Query: 79 ----KTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAA-----------------KDD 116
L G ++G N +L FV G+ +
Sbjct: 915 SAIPSGDVGLAGFVGGFQIGGNQKLNARFVAGLEADLRGSFGNSGSRSQFGTSTSIGNTF 974
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+F + + G + + GY V + +Y GG A + S+ +
Sbjct: 975 LSFGQTTVRLNYLGTIRPRLGYLVTPDVQLYATGGLAFAGLTSSAEMVTDRVGGITTTVG 1034
Query: 176 ---FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD-----VERVDR 227
+ G G+++ + + + A Y + V A +
Sbjct: 1035 DPLYQDTRLGWTAGGGVEWALAPNWTAKAEYLHYDLGQIRVRTDVAHPAGFYSFAALGET 1094
Query: 228 KGNAHIASLGINMHF 242
+ + H+ G+N HF
Sbjct: 1095 QLDGHLLQFGVNRHF 1109
>gi|15420170|gb|AAK97307.1|AF308165_1 Pap31 [Bartonella henselae phage 60457]
Length = 243
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 72/247 (29%), Gaps = 63/247 (25%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
++++ + + A D+ +P + W+G Y+G + +
Sbjct: 4 VIALISASAAQAADVIVPH--------EVAPTVISAPAFSWTGFYIGGQVGNFSSKVEIT 55
Query: 74 DT------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK------------ 114
D ++ GI G N+ L + + G+ A
Sbjct: 56 DPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAEAI 115
Query: 115 ------------------------------DDSTFYRLKEKYFIYGDVVLKAGY-SVDSL 143
D L K G ++ G+ + D +
Sbjct: 116 GQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRIGFTAADRI 175
Query: 144 LIYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
+ Y GG A V S KV +++ + LG G+D+ + ++
Sbjct: 176 MPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGVDFAMTDNVL 235
Query: 199 LSASYRY 205
L A YRY
Sbjct: 236 LRAEYRY 242
>gi|85715495|ref|ZP_01046476.1| putative outer-membrane protein precursor [Nitrobacter sp. Nb-311A]
gi|85697690|gb|EAQ35566.1| putative outer-membrane protein precursor [Nitrobacter sp. Nb-311A]
Length = 257
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 66/211 (31%), Gaps = 22/211 (10%)
Query: 50 EYGIWSGNYVGLHISRLYE------THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
WSG Y+G + T P + + + G ++G+ Q ++V
Sbjct: 41 AIYDWSGFYIGANGGWGSSRNCWNFTTPAGAFVANEGCHDATGGTAGGQIGYRWQSTNWV 100
Query: 104 FGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
FG+ A L +G + GY+ D+ L+Y GG
Sbjct: 101 FGLEAQGNWADLSGRRASLAFPAFTNDSHLGAFGLFTGQIGYAWDATLLYVKGGAAVTSN 160
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
SL + + +G+GL+Y + SL+ Y +I
Sbjct: 161 RYRSLATLTG---AQVTNDVNNSRWGATVGVGLEYGFAPNWSLAFEYDHIFMGNSRTTFI 217
Query: 217 N------AKSDVERVDRKGNAHIASLGINMH 241
N A + + + + + IN
Sbjct: 218 NNGVAGAAGTLFGTDNISQDVDLVTARINYR 248
>gi|27381635|ref|NP_773164.1| hypothetical protein bll6524 [Bradyrhizobium japonicum USDA 110]
gi|27354803|dbj|BAC51789.1| bll6524 [Bradyrhizobium japonicum USDA 110]
Length = 271
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 58/206 (28%), Gaps = 19/206 (9%)
Query: 52 GIWSGNYVGLHISRLYETH--PLADTINRKTYN--SLLPNGLGIELGHNIQLEDFVFGIN 107
WSG Y+G + G ++G+ Q FV G+
Sbjct: 59 YNWSGFYIGANGGWGQSHGCVDFVTPAGTVAGGCADRSGGLAGGQIGYRWQTNQFVLGLE 118
Query: 108 CHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
A+ +T L K G + G++ ++ L Y GG
Sbjct: 119 AQGDWAEIKNTRVSLIDPLISTTGKTDAIGLFTAQLGWAWNASLFYVKGGAAVTRNRFDI 178
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN--- 217
V +A LG+G +Y + S Y ++ + +
Sbjct: 179 FNNVTGVGLASAG----HTRWGGALGVGWEYGFAPNWSAGIEYDHLWMGRDNFGFAGVVT 234
Query: 218 -AKSDVERVDRKGNAHIASLGINMHF 242
+ + + +L +N F
Sbjct: 235 PGGLTLTGSGISQDVDMVTLRLNYRF 260
>gi|83308753|emb|CAJ01663.1| putative outer-membrane immunogenic protein precursor [Methylocapsa
acidiphila]
Length = 282
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/251 (16%), Positives = 71/251 (28%), Gaps = 41/251 (16%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLL------- 85
DL + A W+G Y+G I + + T
Sbjct: 20 AADLPSRAPPPAYVPPAPIFTWTGVYIGGQIGYAWTNPNVTYGDAGYTVGGFPLGYADSY 79
Query: 86 -------PNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI---------- 128
G +G+N+QL +V G+ + T +
Sbjct: 80 NVGGNANGVIGGAHVGYNLQLGQWVLGLEGDVDGSSISKTVSVSPYSSYYADYIPTTFHS 139
Query: 129 ----YGDVVLKAGYSVDSLLIYGMGGFG------GAYVIDSSLEKVESDNSKNAKGRFDG 178
G + + G + D L+Y GG ++ + + S+ + F
Sbjct: 140 NLGIQGSIRGRVGIAWDRALLYATGGVAFGGFTSYVSTSYANPQGILSNFPFSGNDSFSQ 199
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER-------VDRKGNA 231
+G GL+Y + + S+ YRY S NA V R
Sbjct: 200 TRVGWTVGGGLEYAITNNWSVRGEYRYTDFGHTSNYLVNAFPVYPGDVSVGAWVHRHLTE 259
Query: 232 HIASLGINMHF 242
+ +G + F
Sbjct: 260 NRVQVGFSYKF 270
>gi|316932990|ref|YP_004107972.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris DX-1]
gi|315600704|gb|ADU43239.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris DX-1]
Length = 696
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 64/220 (29%), Gaps = 29/220 (13%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKT-----------YNSLLPNGLGIE 92
WSG Y+G H S + + + + +G++
Sbjct: 55 APLAPRAVFDWSGFYIGAHFSAVAGHSNWSSAPAGGSGSIDLFDAFQLFKGTGSYVVGLQ 114
Query: 93 LGHNIQLED-FVFGINCHTTAAKD----------DSTFYRLKEKYFIYGDVVLKAGYSVD 141
G+N L ++ G+ + T + + G V + GY++
Sbjct: 115 AGYNWMLPSRWLIGVEADLNSPNTLGGNTGNTLPSGTVGGHDHQALLGGTVRGRLGYALG 174
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
L Y GF +Y + A G G+D ++ S A
Sbjct: 175 GWLPYVTAGFAWSYDRLRWPPDPALAQQETALL----WRLGWSAGAGIDLPLSPAWSARA 230
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
Y +V+ A ERV H LG+N
Sbjct: 231 EYLATGFGNGTVSFPIAG---ERVTSDVLTHAVRLGLNYR 267
>gi|307942791|ref|ZP_07658136.1| porin [Roseibium sp. TrichSKD4]
gi|307773587|gb|EFO32803.1| porin [Roseibium sp. TrichSKD4]
Length = 183
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 67/196 (34%), Gaps = 19/196 (9%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
+ E W G Y+G H + D + SL G G+N F+ G+
Sbjct: 6 EPETNSWQGFYIGGHFGYNWMNGQ-DDLDDGIGTTSLSSVIGGFHAGYNHMFGQFLLGVE 64
Query: 108 CHTTAAKDDS-TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+ + T L ++AGY+ + L Y G +
Sbjct: 65 AEGNLSDLNGQTAGGLDASSNWMIAGRVRAGYAFEHFLAYATAGVSM------------A 112
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D S + + + +V+G GL+ V +IS Y++ + S N +N V
Sbjct: 113 DASLSGTKKSSNTHTGLVVGGGLEAFVTQNISARLEYQHHWLNEQSYNTNNTDYKV---- 168
Query: 227 RKGNAHIASLGINMHF 242
I G++ HF
Sbjct: 169 -DAELDIVRAGLSYHF 183
>gi|27378846|ref|NP_770375.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27351995|dbj|BAC49000.1| bll3735 [Bradyrhizobium japonicum USDA 110]
Length = 223
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 67/234 (28%), Gaps = 36/234 (15%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
F ++ + A DL PR + Y W+G Y G +
Sbjct: 17 FAAVFAAGSACAADL-SPRYA----APASAYTAPQPVY-SWTGLYAGFNAGYAESGDDAF 70
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD--STFYRLKEKYFIYG 130
+ + T + G+++G+N QL FV GI Y
Sbjct: 71 NNLAGATGGKVKGAVGGVQIGYNYQLSPMFVVGIENDFEGGDIKNHDALNSAAVSLPWYM 130
Query: 131 DVVLKAGYSV--DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
+AG + LL +G G D G + G G
Sbjct: 131 TGRARAGIATMDSRLLFFGTAGLAAGEFKD---------------GPINKMKMGWTAGGG 175
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ S A Y Y + + NA H +G+N HF
Sbjct: 176 VEWAFLPKWSAKAEYLYTEFKHDDLPDWNA----------AKFHTFRVGVNYHF 219
>gi|86751658|ref|YP_488154.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86574686|gb|ABD09243.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 238
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 65/211 (30%), Gaps = 28/211 (13%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDF 102
V W+G Y+G HI + + + G G+++G++ Q +
Sbjct: 34 VYAPPAPIYNWTGFYIGGHIGGAFA-GDNSIGTGVTAGSDGKFLG-GVQVGYDWQFAPSW 91
Query: 103 VFGINCHTTAAKDD-----------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
V G+ + + Y + V + GY+ L+Y GG+
Sbjct: 92 VLGVEGQYSWLSGTNDAVSFTVPGVAGTYTYADNQRGLASVTGRLGYTWGPALLYVKGGW 151
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
A S S + +G GL+Y+ + S Y+Y
Sbjct: 152 AYADYTSSLTLSGVGTVSSTSSQD------GYTVGGGLEYLFAQNWSGKIEYQYYDFGNV 205
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ K + H+ G+N F
Sbjct: 206 DL--------GAGFTAKNDQHVVKAGLNYRF 228
>gi|148255737|ref|YP_001240322.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407910|gb|ABQ36416.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 251
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 73/243 (30%), Gaps = 21/243 (8%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD- 74
++ SLA+ + DL WSG Y+G + +
Sbjct: 4 LLLGATTSLALGIAPAIAADLPARTFTKAPAMIATIYDWSGFYLGFNAGGGSARTCWTNQ 63
Query: 75 -------TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR------ 121
N + + G ++G+ Q +VFG+ A
Sbjct: 64 VTIAGVAATNAEGCHDATGALAGGQVGYRWQTGGWVFGVEGQGNWANLKGRNASQLAPGV 123
Query: 122 -LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ K G + + GY+ +++L Y GG S L A
Sbjct: 124 TNQTKINGVGLLTGQIGYAWNNVLWYVKGGAAVTGEKYSGLATATGTPFDQASA----TR 179
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE--RVDRKGNAHIASLGI 238
+G G++ + S++A Y ++ ++ S + +A++ +
Sbjct: 180 WGAAVGTGVEVGFANNWSIAAEYEHLFMGNRTLTFSGVPGGAATRTDAVGQDVDMATVRV 239
Query: 239 NMH 241
N
Sbjct: 240 NYR 242
>gi|91978029|ref|YP_570688.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris
BisB5]
gi|91684485|gb|ABE40787.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris
BisB5]
Length = 724
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 31/216 (14%), Positives = 63/216 (29%), Gaps = 30/216 (13%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHP-----------LADTINRKTYNSLLPNGLGIELGHN 96
W+G Y+G H S + + + LG++ G+N
Sbjct: 88 GPAVFDWNGFYIGGHFSYVAGRSDWTAQPAGVSGTIDLFDAFDAFKGTGSYTLGLQAGYN 147
Query: 97 IQLED-FVFGINCH----------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLI 145
+ L ++ G+ + + T + + G V + GY++D L
Sbjct: 148 VLLPSRWLLGLEADLTSPNRIGGNASISPPTGTIGGHDHQTQLAGTVRGRLGYALDGWLP 207
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y GF +Y + + G G++ ++ + Y
Sbjct: 208 YATAGFAWSYDRLRWPSEAAATEETALL-----WRLGWAAGAGVELPLSPAWTARVEYLA 262
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ A +++ H LG+N
Sbjct: 263 TGFGRDTARFPIAG---HQIESDALIHAVRLGLNYR 295
>gi|146342874|ref|YP_001207922.1| putative outer membrane protein [Bradyrhizobium sp. ORS278]
gi|146195680|emb|CAL79707.1| putative outer membrane protein precursor [Bradyrhizobium sp.
ORS278]
Length = 214
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 26/192 (13%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHT 110
W+G Y+G + + T + G+ G+N Q +V GI
Sbjct: 48 YSWAGPYLGGTLGYQWGTV-------GNSATKPSGLVGGVTAGYNWQNGSPWVLGIEGDI 100
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + TF K +G + + GY+ +++L YG GG + + ES
Sbjct: 101 NLSGANDTFAPWKFSNPWFGTLRGRVGYAFNNILFYGTGGLALGGLRAETFGLSESH--- 157
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
LG+G ++ + + + Y Y+ ++ + AK
Sbjct: 158 --------TAVGWTLGVGTEFGLAQNWTAKIEYLYVDLDSNNFVITGAK-------NDYR 202
Query: 231 AHIASLGINMHF 242
+ + GIN HF
Sbjct: 203 SGMIRAGINFHF 214
>gi|27377196|ref|NP_768725.1| hypothetical protein bll2085 [Bradyrhizobium japonicum USDA 110]
gi|12620785|gb|AAG61061.1|AF322013_180 ID877 [Bradyrhizobium japonicum]
gi|27350339|dbj|BAC47350.1| bll2085 [Bradyrhizobium japonicum USDA 110]
Length = 417
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 82/258 (31%), Gaps = 37/258 (14%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L +++V + A DL A WSG Y+G H+ Y
Sbjct: 7 LLGATTIALVANGAANAADL---EPEVKLPAA----------VWNWSGGYIGGHVGGGYG 53
Query: 69 THPLADTINRKTYN---SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK 125
++ Y G ++G+N Q +VFG+ + A D T L
Sbjct: 54 RTSFSNPYGPSIYGGIVDTPTFLAGGQIGYNWQKNGWVFGVELDVSGAVSDGTNTCLASS 113
Query: 126 Y-----------FIYGDVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
I+ + GY+ + L Y GG + E
Sbjct: 114 GFVVSANCKAGPNIFATATGRVGYTFGASGGTLAYLKGGAAWQNNQGDVINNHEGGLVPQ 173
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN-------AKSDVER 224
K FD ++G+G++ + S++A Y Y+ SV A
Sbjct: 174 EKTHFDYGRIGGIIGLGVEQALTPAWSVAAEYDYLNFGGPSVATPPTVQGPPFAIVPANT 233
Query: 225 VDRKGNAHIASLGINMHF 242
N HI +G+N HF
Sbjct: 234 TSPSSNYHIGKIGLNYHF 251
>gi|158425587|ref|YP_001526879.1| putative outer-membrane immunogenic protein [Azorhizobium
caulinodans ORS 571]
gi|158332476|dbj|BAF89961.1| putative outer-membrane immunogenic protein [Azorhizobium
caulinodans ORS 571]
Length = 202
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 63/191 (32%), Gaps = 31/191 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL--EDFVFGINCHTT 111
W+G YVG +I + + G++ G+N+Q+ V G+
Sbjct: 41 WTGFYVGGNIGYGWGSAGADSP---------KGFLGGLQAGYNLQMAGSPIVLGLETDFD 91
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A + Y G V +AG++ D +LIYG GF
Sbjct: 92 WAGMNDGNY----SQDYIGTVRARAGFAFDRVLIYGTAGFAYGKGSYQVFGL-------- 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
LG G +Y ++ + S A Y Y+ + + V + +
Sbjct: 140 ---SNSQTSYGWALGAGAEYAIDRNWSARAEYMYVDLGNSTY-----GTWVGPTNVSYDT 191
Query: 232 HIASLGINMHF 242
+ G+N F
Sbjct: 192 SVLRAGVNYRF 202
>gi|75675759|ref|YP_318180.1| putative outer-membrane protein precursor [Nitrobacter winogradskyi
Nb-255]
gi|74420629|gb|ABA04828.1| putative outer-membrane protein precursor [Nitrobacter winogradskyi
Nb-255]
Length = 258
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 70/211 (33%), Gaps = 22/211 (10%)
Query: 50 EYGIWSGNYVGLHISRLYE------THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
WSG Y+G + T P + + ++ G ++G+ Q +++
Sbjct: 42 AIYDWSGFYIGANGGWGSSRNCWDFTTPAGVFVANEGCHNATGGTAGGQIGYRWQATNWL 101
Query: 104 FGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
FG+ A L +G + GY+ D+ L+Y GG
Sbjct: 102 FGLEAQGNWADLSGRNVSLAFPAFTNNSNLNAFGLFTGQIGYAWDATLLYVKGGAAVTSN 161
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
SL A + + V+G+GL+Y + SL+ Y +I +
Sbjct: 162 RYRSLVTATGV---QATDSVNNNRWGAVVGVGLEYGFAPNWSLAFEYDHIFMGNSRHTFT 218
Query: 217 N------AKSDVERVDRKGNAHIASLGINMH 241
N A + + + I + IN
Sbjct: 219 NNGVAGAAGTLFGTDNISQDVDIVTARINYR 249
>gi|163759157|ref|ZP_02166243.1| outer membrane protein [Hoeflea phototrophica DFL-43]
gi|162283561|gb|EDQ33846.1| outer membrane protein [Hoeflea phototrophica DFL-43]
Length = 212
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 52/149 (34%), Gaps = 16/149 (10%)
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
G+N Q ++ V+G+ + D++ + + G + + GY ++ L+Y GG
Sbjct: 80 GYNWQSDNIVYGVEGDLGYSGADASLGGVTGEQGFNGSLRARLGYDINPFLLYATGGLA- 138
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+A G G G + V +I+ YRY + +
Sbjct: 139 ----------ATRAEVTSAAGSDTNTHLGWTAGAGAEAFVTENITTRLEYRYTDYGSETY 188
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
N V + H LGI M F
Sbjct: 189 NLGGTN-----VSSGFDDHSVRLGIGMKF 212
>gi|154244432|ref|YP_001415390.1| porin [Xanthobacter autotrophicus Py2]
gi|154158517|gb|ABS65733.1| porin [Xanthobacter autotrophicus Py2]
Length = 283
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 72/278 (25%), Gaps = 56/278 (20%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT----- 75
A + W+G Y+G + + + L
Sbjct: 6 VAVFAASVMSGAACAADLAVAVTKAPPAPASFSWTGFYIGGNAGYAWNSGTLDGVGYIYG 65
Query: 76 ----------INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY----- 120
N + + G + G+N Q+ V G A T+
Sbjct: 66 SDYGSYSNGWFNGQRSSESNSFTGGAQAGYNYQIGRAVLGFEADINYADASKTYAASSTY 125
Query: 121 --------------------RLKEKYFIYGDVVLKAG-YSVDSLLIYGMGGFGGAYVIDS 159
+G + + G ++D LL+Y GG V S
Sbjct: 126 DLYPYPVDRPDYNYHLREQLDASASVEWFGTIRARLGVTALDRLLVYATGGAAYGKVSGS 185
Query: 160 SL-------------EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
D S G +G GL+Y + +I++ Y Y+
Sbjct: 186 GSYSWREYGFWWGGPGDHAFDRSGGFGGTDSSVRWGWTVGGGLEYAITDNITVKGEYLYV 245
Query: 207 PHHIHSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ A E V ++A LG+N F
Sbjct: 246 DLGSNDYRIPEAIGGDEFVTWTSSTKLNVARLGVNYKF 283
>gi|254504423|ref|ZP_05116574.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii
DFL-11]
gi|222440494|gb|EEE47173.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii
DFL-11]
Length = 221
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 63/215 (29%), Gaps = 22/215 (10%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIE 92
+ + W+G YVG + + + ++++ G
Sbjct: 24 PQSPAPAPAYDAVPAGQQSIDWTGFYVGTQLGWAFGNFDNSTGGASSSFSNNGVGGGAYA 83
Query: 93 LGHNIQL-EDFVFGINCHTTAAKDDSTFY----RLKEKYFIYGDVVLKAGYSVDSLLIYG 147
+N Q+ + V G+ + + + LK + + GY+ D +IYG
Sbjct: 84 G-YNFQVTPNVVVGLESDFSLTDLEKSGTVNGLSLKSSSDWNANFRGRLGYAFDRYMIYG 142
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GG A + ++ + LG G + + ++ Y Y
Sbjct: 143 AGGLAIADLEATANGVSD-----------SKTALGWTLGAGAEAAITQNVVARFDYSYQD 191
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N V + N H GI F
Sbjct: 192 FGDQDFNLGG-----TGVSTEFNDHQVRAGIAYKF 221
>gi|49473904|ref|YP_031946.1| hemin binding protein a [Bartonella quintana str. Toulouse]
gi|8575707|gb|AAF78059.1|AF266281_1 hemin-binding surface protein A precursor [Bartonella quintana]
gi|21689904|gb|AAM68129.1| hemin-binding protein A [Bartonella quintana]
gi|49239407|emb|CAF25745.1| Hemin binding protein a [Bartonella quintana str. Toulouse]
Length = 272
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 71/286 (24%), Gaps = 65/286 (22%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+L +++V + + A D+ W+G Y+G I
Sbjct: 3 IKSLITTSVIALVSASAAQAADVIAT---------HEAAPVITTPNFSWTGFYIGGQIGN 53
Query: 66 LYETHPLADTINRKTY------NSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK---- 114
+ + + L GI G NI L + G+ A
Sbjct: 54 FTSDNKIKGLGKETSIFTKELTPQLSGIVGGIYAGSNIDLGSGLILGVETDAIWADCEAT 113
Query: 115 ---------------------------------DDSTFYRLKEKYFIYGDVVLKAGY-SV 140
+D+ K G + G+ +
Sbjct: 114 KTSAIRTLSVPQANSLNDEFKAAGITLKDKFSENDTMSDHYTYKAKWSGATRARIGFSAF 173
Query: 141 DSLLIYGMGGFGGAYVID----SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
D ++ Y GG A + S + ++ + G+D + +
Sbjct: 174 DRVMPYFAGGVAYARMQGMKSVSGMNAAKNKKLGGGLYDETKMMVGFTVSGGVDVAMTGN 233
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L YRY N+ + + G+ F
Sbjct: 234 VLLRGEYRYSDFGKKKFLNN-------TQEFNYKTNDFRFGVAYKF 272
>gi|296447763|ref|ZP_06889678.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b]
gi|296254740|gb|EFH01852.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b]
Length = 723
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 68/243 (27%), Gaps = 28/243 (11%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN----- 82
L+ L A E W+G ++G+ +
Sbjct: 5 LFATLPPLLAASAGACAEPAPPPIFSWAGLHLGVDAGVGLPVASGGRVEAAAGLSPTAHA 64
Query: 83 ------SLLPNGLGIELGHNIQLEDFVFGINCHTTAAK----DDSTFYRLKE-------- 124
G +G++ Q +V+G+ DD F
Sbjct: 65 LIAPGRDRAGVSFGARIGYDWQKGPWVYGLESELNFLDLRRGDDGVFAGFGALGAATRRL 124
Query: 125 ----KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF-DGH 179
V + GY+ L+Y G +SL V + D
Sbjct: 125 TTQENGQYVASVRGRLGYAFGRTLVYAAAGVAAGGWRGASLLTVTPGVAGPFFAPVSDSS 184
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
V+G G++ + S Y Y+ + + + S V ++ AH+ LG++
Sbjct: 185 RMKFVIGAGVEQALFDRWSARLEYTYVNQQLQIRHFDDYSSSAFDVRQRSEAHLLRLGLD 244
Query: 240 MHF 242
F
Sbjct: 245 YRF 247
>gi|116254616|ref|YP_770452.1| putative outer-membrane immunogenic protein precursor [Rhizobium
leguminosarum bv. viciae 3841]
gi|115259264|emb|CAK10397.1| putative outer-membrane immunogenic protein precursor [Rhizobium
leguminosarum bv. viciae 3841]
Length = 226
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/237 (18%), Positives = 71/237 (29%), Gaps = 24/237 (10%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
F V +S+++ + A DL + Y W+G Y GLH
Sbjct: 14 IKRKIFSVGVSMLMACGASAADLADH-------SVPSAPSYDAPGTFSWAGAYAGLHGGV 66
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK 125
+N+ +G ++G+N Q VFG + ++ +
Sbjct: 67 AASK--------FNPFNNGRAPAVGAQVGYNFQAGSGVFGAELEGSYLNNEVRVPVGNVE 118
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
G KAG D +YG G S K D +
Sbjct: 119 SRFRGAAKAKAGLGFDRTFVYGTAGV----TTTEFEGHRLVSGSDKWKSGPDSWKHGYLF 174
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G G+++ + +S Y Y+ N S N ++ G+N F
Sbjct: 175 GGGVEHAFSGGVSAKIEYNYV-----INNAVPTTSGGISSRSDLNDNVIEAGLNFRF 226
>gi|222148166|ref|YP_002549123.1| outer membrane protein [Agrobacterium vitis S4]
gi|221735154|gb|ACM36117.1| outer membrane protein [Agrobacterium vitis S4]
Length = 212
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/233 (20%), Positives = 77/233 (33%), Gaps = 25/233 (10%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
V+ L SL + + EA V+ W+G YVG +
Sbjct: 4 LVMILLASSAGLSLVTGAHAADAVMSVPEAPAAVDMPAP-VSNWAGAYVGGAGTYTMGRS 62
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS-TFYRLKEKYFIY 129
+ R G + G+N+Q + V+G + S + L K +
Sbjct: 63 HGSKFSARA-------FGGQVYGGYNMQNDKIVYGGEADIGYDGNGSRSGAGLNGKQGVN 115
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G + + GY ++ ++YG G A S A G +G G+
Sbjct: 116 GSIRGRVGYDLNPFMVYGTAGVAAADTKIS-----------GAGGSDSKAALGYTVGAGV 164
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ MV +I+ YRY + N +V R + +GI M F
Sbjct: 165 EAMVTNNITTRVEYRYTDYQNKDYNIGG-----SKVSRGFDDQSVKVGIGMKF 212
>gi|296447762|ref|ZP_06889677.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b]
gi|296254739|gb|EFH01851.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b]
Length = 732
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 25/216 (11%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTY--------NSLLPNGLGIELGHNIQLEDFV 103
+W G ++G++ + + +G ++G++ + + V
Sbjct: 40 TLWEGMHIGVNAGAGFPLSSGGRLEGFGADAFGLAAPSHDRAGASIGAQIGYDWRKGEIV 99
Query: 104 FGINCHTTAAKDDSTFYRL----------------KEKYFIYGDVVLKAGYSVDSLLIYG 147
+G+ L E + + + G + L+YG
Sbjct: 100 YGVETDFNYLGLRRAATGLFAAPSSFGLGGYALTADESSNSFMSLRGRLGRAYGPWLVYG 159
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GG +S + + +G G+ + S Y Y+
Sbjct: 160 TGGVAAGGWRGASNLARLPSLALYSAPLSQSSRMKYAIGAGVQRALGDHWSARLEYLYLN 219
Query: 208 HHIHSVNNSNAKSDVE-RVDRKGNAHIASLGINMHF 242
A++ ++ +HI G++ F
Sbjct: 220 QQSQKQLYETAEATPPFLARQRSESHILRFGLDYRF 255
>gi|323136029|ref|ZP_08071112.1| hypothetical protein Met49242DRAFT_0499 [Methylocystis sp. ATCC
49242]
gi|322399120|gb|EFY01639.1| hypothetical protein Met49242DRAFT_0499 [Methylocystis sp. ATCC
49242]
Length = 582
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/255 (14%), Positives = 68/255 (26%), Gaps = 56/255 (21%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS-------------------- 83
W+G YVG + + + ++
Sbjct: 36 APVAPPPVFTWTGLYVGFNFGHTWTASDPVSIGSVNPFDLSGAGFGPASALGATGAVDAR 95
Query: 84 LLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDS----------------TFYRLKEKY 126
L G + G+N Q + + G A + +L
Sbjct: 96 LGGYFFGGQAGYNWQFSEKLIAGFEADIQGAGVRGGGHLASILPAPAGFAVSGVKLSRGL 155
Query: 127 FIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSS----LEKVESDNSKNAKGRFDGHGS 181
+G V + GY+V + Y GG V S ++ K + +
Sbjct: 156 EYFGTVRGRFGYAVTPTFMAYVTGGLAYGGVTADSAIRQSLTPSLLLAEPGKLDYFDNRV 215
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS--------------DVERVDR 227
+G G + ++ +IS Y Y +++ + D R
Sbjct: 216 GWTVGAGGEVALSRNISAKLEYLYYDLGGVTLSTPSYFPLTFSDVQTKALTLADASRYTT 275
Query: 228 KGNAHIASLGINMHF 242
+ N H G+N F
Sbjct: 276 RYNGHTLRAGLNYRF 290
>gi|312113068|ref|YP_004010664.1| hypothetical protein Rvan_0276 [Rhodomicrobium vannielii ATCC
17100]
gi|311218197|gb|ADP69565.1| hypothetical protein Rvan_0276 [Rhodomicrobium vannielii ATCC
17100]
Length = 260
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 81/207 (39%), Gaps = 28/207 (13%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSL---------LPNGLGIELGHNIQLEDFV 103
+W G Y+G +I + T A + + G++LG+NI + +F+
Sbjct: 52 LWQGFYIGGNIGGAWSTIETASNVVFVNGATTVLSDRSVEGSGFLGGLQLGYNIPIGNFL 111
Query: 104 FGINCHTTAAKDDSTFY-----------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+GI +D++ + YGDV ++ G+ + LIY GGFG
Sbjct: 112 WGIEGDLGGLGNDASKSFAVGGVLPSVLTVSSDGGWYGDVTVRGGFLYGNALIYLKGGFG 171
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ ++ +A + G + LG GL+Y V+ S+ A Y Y +
Sbjct: 172 FYTGETNVTLVTDN---ISALRQSSGTFTGWTLGGGLEYQVSPRWSIKAEYLYFDFGDST 228
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGIN 239
+N + + + + + +G N
Sbjct: 229 LNFDDRQ-----FNNDMSVNTFKIGFN 250
>gi|323138453|ref|ZP_08073522.1| porin [Methylocystis sp. ATCC 49242]
gi|322396249|gb|EFX98781.1| porin [Methylocystis sp. ATCC 49242]
Length = 502
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 74/265 (27%), Gaps = 41/265 (15%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
LF + + A DL A + W+G ++G +
Sbjct: 3 KKLFLSFAALPTIALSAQAADL----------PAQKSPPPAPPPVFSWTGFHLGFNRGFG 52
Query: 67 YET--------HPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDS 117
P +T++ +G ++G++ Q E+ V G+ + S
Sbjct: 53 GAVSEARVALAAPGLGGTATRTFDQASGWFVGGQIGYDYQFENGVVLGVETDMQWSDIRS 112
Query: 118 --------------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
T +G + GYS +L Y GG V +
Sbjct: 113 SHQATTIASNPLLLTNADTSHSLDWFGTTRGRVGYSFGRMLPYLTGGVAYGQVEARGAQA 172
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + R G GLD+ ++ +S A Y Y+ S
Sbjct: 173 LAAGLVSVGGAR--ETNVGWAAGAGLDFALSPRLSARAEYLYLQLPGVSGPAVGLTPPPL 230
Query: 224 RVDRK------GNAHIASLGINMHF 242
AH+ G+N F
Sbjct: 231 PPLVGSFSTGLVEAHMVRGGMNYRF 255
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/215 (15%), Positives = 59/215 (27%), Gaps = 28/215 (13%)
Query: 52 GIWSGNYVGLHISRLYETHPL-------ADTINRKTYNSLLPNGLGIELGHNIQL-EDFV 103
W+G YVG++ + N G + G+ Q + FV
Sbjct: 280 LDWTGFYVGVNGGYGGGVVDGVTGFAQPGLAFSTSVSNRTGGAVAGGQAGYAYQFADRFV 339
Query: 104 FGINCHTTAAK-------------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
G+ + + F +G + G + L Y GG
Sbjct: 340 VGVETDAQWSGVQAWHQATTVGGPNGYVFTDTPNAMTWFGTTRARLGLARGYSLSYVTGG 399
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G +G G +Y + ++SL A Y Y+
Sbjct: 400 VAYGEI----TASGTQAAGALFTGAGARSQVGWTVGSGTEYALAPNLSLRADYLYVSFAG 455
Query: 211 HSVNNSN---AKSDVERVDRKGNAHIASLGINMHF 242
S + A + H+ +G+N F
Sbjct: 456 VSGPAAGIAPAPFAGAFSTGRFATHVTRIGLNWRF 490
>gi|85713860|ref|ZP_01044849.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
gi|85698986|gb|EAQ36854.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
Length = 224
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 68/192 (35%), Gaps = 24/192 (12%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHT 110
W+G Y+G HI + N+ G+++G++ Q ++VFG+ +
Sbjct: 43 YNWTGFYLGGHIGGAFGGANNIFAPGVAFNNNDGVFMGGVQVGYDTQFSPNWVFGLEANY 102
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ S F G V + GY+ L+Y GG+G A ++
Sbjct: 103 SFLDTGSFFANRG-----LGSVTGRLGYTWGPALLYVKGGYGWADSRFTNGFGGNGGRDG 157
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+G GL+Y+ + S Y+Y ++ + + +
Sbjct: 158 ------------YTVGGGLEYLFTQNWSGKVEYQYYDLGTVNLVAP------VVANFRND 199
Query: 231 AHIASLGINMHF 242
H +G+N F
Sbjct: 200 QHTVKVGLNYRF 211
>gi|239832169|ref|ZP_04680498.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824436|gb|EEQ96004.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 212
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 73/233 (31%), Gaps = 26/233 (11%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
+ +++ + A + + + + N+ WSGNY+G I
Sbjct: 5 SITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVASGP--HDWSGNYIGAQIGASSSKV 62
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIY 129
+ + G+ +G N+Q + VFG A+ + + +
Sbjct: 63 -------PGPFTNRTGALGGVVVGKNMQSGNVVFGAELEGNFAEAEHRIGHGGSLQQSWN 115
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G+ K GY+ D L+YG G+G G ++G G+
Sbjct: 116 GNAKGKVGYAFDKTLVYGTAGYGVTRFKAKDNTTSAP-----------GWEGGALIGAGV 164
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + +S+ A Y + + + H G+N F
Sbjct: 165 EQALTGPLSVKAEYDFQRFSDVKSRVNGVEQ-----RNNLKNHSIKAGLNYKF 212
>gi|91978079|ref|YP_570738.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91684535|gb|ABE40837.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 235
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 19/208 (9%)
Query: 47 QDDEYGIWSGNYVGLHISRL-----YETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
W+G Y+G++ S + ++ ++ G+++G + Q+
Sbjct: 32 PVPALYNWTGVYIGINGSAVLSDKRWDYFGPLLPTGDDGAHNFTGLFGGVQVGFDYQVGS 91
Query: 102 FVFGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+VFG+ + T L + +G + + GY++++ L+Y GG G
Sbjct: 92 WVFGVEAQGDWGRARGTSDSLLFANQTNRTLIDAFGLINGRFGYALNNALLYVKGGAGVV 151
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
NA +G GL+ + IS++A Y +I V
Sbjct: 152 QEKYDVFATDTGVTFTNA----SETRWGSTVGAGLELAFSEHISVAAEYNHIFLGSRDVA 207
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + + +L +N F
Sbjct: 208 FA---PTGDIYRIRQDLDVLALKLNYRF 232
>gi|118593370|ref|ZP_01550754.1| outer membrane protein, putative [Stappia aggregata IAM 12614]
gi|118434048|gb|EAV40705.1| outer membrane protein, putative [Stappia aggregata IAM 12614]
Length = 208
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 61/170 (35%), Gaps = 16/170 (9%)
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-DDSTFYRLKEKYFIYGDV 132
D + N P G G+ +G+N L FV GI A D+T L
Sbjct: 54 DNLGSPPENLASPVG-GVHVGYNHMLGQFVLGIEGEANLANFSDTTSANLDVDINWMIAA 112
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
L+AGY+ D L + G + V SD + + G G++
Sbjct: 113 RLRAGYAFDRFLAFATTGVSFSEVTFEIPGTGISD---------SNTHTGFLFGGGVEGY 163
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V IS+ A Y++ S N D+E + + G++ HF
Sbjct: 164 VTEHISVRAEYQHHWFGNESYNVGAGAFDIEG-----DLDLLRAGVSYHF 208
>gi|148252036|ref|YP_001236621.1| putative 31 kDa outer-membrane immunogenic protein [Bradyrhizobium
sp. BTAi1]
gi|146404209|gb|ABQ32715.1| putative 31 kDa outer-membrane immunogenic protein precursor
[Bradyrhizobium sp. BTAi1]
Length = 219
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 55/194 (28%), Gaps = 30/194 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA 112
W+G Y G ++ + + + L G++ G+N Q+ FV GI
Sbjct: 47 WTGFYAGANVGGAFTGNDSVTNLAGGNGGKLSGVIGGMQAGYNYQVSPLFVVGIENDLDF 106
Query: 113 AKDD--STFYRLKEKYFIYGDVVLKAGYSV--DSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+AG+++ L +YG G + D
Sbjct: 107 TGLSRQGDLVNPAVSVPWLTTGRARAGFTMLDQRLFLYGTAGLAAGELKD---------- 156
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
G G G ++ S Y Y ++ + A
Sbjct: 157 -----GPVHKVKMGWTAGGGAEWAFLPKWSAKLEYLYTDLKHDALPDWRA---------- 201
Query: 229 GNAHIASLGINMHF 242
H +G+N HF
Sbjct: 202 AKIHSVRVGLNYHF 215
>gi|146341078|ref|YP_001206126.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193884|emb|CAL77901.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
Length = 259
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 22/216 (10%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYET----------HPLADTINRKTYNSLLPNGLGIELG 94
W G YVG + + NR+ + +G ++G
Sbjct: 38 PAVMATVYDWGGFYVGFNAGGGSSRDCWNLVSNAGVAVNPAANREGCSGGGGAAVGGQIG 97
Query: 95 HNIQLEDFVFGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYG 147
+ Q+ ++VFG+ A T L + + +G + GY+ D++L+Y
Sbjct: 98 YRYQMANWVFGVEAQGDWANFKGTNRNLILPNVSDRSRTNGFGLFTGQVGYAFDNILVYF 157
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GG + + R + +G GL+Y + S+ Y +I
Sbjct: 158 KGGAAVVGDRYDTFTTGTNVMLD----RANTTRWGGTVGAGLEYGFAPNWSVGIEYDHIF 213
Query: 208 HHIHSVNN-SNAKSDVERVDRKGNAHIASLGINMHF 242
++N + A K + I + +N F
Sbjct: 214 LGNKNLNFVAAAGQPAMTHRIKQDVDIGLVKLNYKF 249
>gi|240138602|ref|YP_002963074.1| putative outer membrane porin (OMPA-like) [Methylobacterium
extorquens AM1]
gi|240008571|gb|ACS39797.1| Putative outer membrane porin (OMPA-like) [Methylobacterium
extorquens AM1]
Length = 703
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 59/221 (26%), Gaps = 35/221 (15%)
Query: 49 DEYGIWSGNYVGLHISRLYETH-----------------PLADTINRKTYNSLLPNGLGI 91
+ WSG Y G+ S D + +G
Sbjct: 41 PRFIDWSGFYAGVQGSAGASFGNYDLGPTTIGPRRVRSISTGDATGSRDLGGDATTAVGG 100
Query: 92 -ELGHNIQLEDFVFGINCH----------------TTAAKDDSTFYRLKEKYFIYGDVVL 134
G N Q V+GI D F ++EK ++G
Sbjct: 101 AFAGWNWQDGALVYGIEADLVGANLKRGARSDAMGFGYEGIDPPFALIREKTDVFGAARA 160
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ GY+ + LIY G GA + + + LG G+ + V+
Sbjct: 161 RLGYAFGNNLIYATAGLTGANGRVLA-TYPDLAGGPTVTATRNVSYLGFTLGAGVQFAVD 219
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+SL YRY A ++ S
Sbjct: 220 PHLSLGIDYRYSDLGESGRFGLGALPGLDGGPVTTRTSFVS 260
>gi|188581225|ref|YP_001924670.1| carbohydrate-selective porin OprB [Methylobacterium populi BJ001]
gi|179344723|gb|ACB80135.1| Carbohydrate-selective porin OprB [Methylobacterium populi BJ001]
Length = 703
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 60/221 (27%), Gaps = 35/221 (15%)
Query: 49 DEYGIWSGNYVGLHISRLYETH--------------PLADTINRKTYNSLLPNG----LG 90
+ WSG Y G+ S T + L + G
Sbjct: 41 PRFLDWSGLYAGVQGSAGASFGNYDIGPTTIGTRRVRTISTGDATGSRDLGGDATTVAAG 100
Query: 91 IELGHNIQLEDFVFGINCHTTAAK----------------DDSTFYRLKEKYFIYGDVVL 134
G N Q V+G+ D F ++EK ++G
Sbjct: 101 AFAGWNWQDGAIVYGLEADLAGTNLKRGARSDAPGFGYEAVDPPFALVREKTDLFGAARA 160
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ GY+ + LIY G GA + + A + LG G+ + V+
Sbjct: 161 RLGYAFGNNLIYATFGLTGANGRVLA-TYPDLSGGPTATAARNVSYLGYTLGAGVQFAVD 219
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+SL YRY + + S
Sbjct: 220 PHLSLGIDYRYSDLGESARFGLGTLPGADGGPVTTRTGFVS 260
>gi|83308664|emb|CAJ01572.1| outer membrane protein [uncultured bacterium]
Length = 252
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 66/224 (29%), Gaps = 35/224 (15%)
Query: 54 WSGNYVGLHISRLYETHPL-------------ADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + ++ + G +G+N Q+
Sbjct: 17 WTGVYLGGQIGYAWSNGSNNFNGFDPFFNRGRGVFLDSSAGGTPNGVIGGAHVGYNYQIP 76
Query: 101 DF--------VFGINCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVDSL 143
+ V G+ D + I G + + G + D
Sbjct: 77 SWNWFSSSGVVIGLEGTVDGTSLSNTAIAVFPDGSNVSASSTANIQGSIRGRIGIAWDRA 136
Query: 144 LIYGMGGFGGAYVIDS---SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
LIYG GG + + + A G + +G G+DY + + S+
Sbjct: 137 LIYGTGGVAFGGFETNVRFNGTDFATGAPFFASGSISSTRTGWTVGGGIDYAITNNWSIF 196
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVD--RKGNAHIASLGINMHF 242
YRY N+ + R+ + +G + F
Sbjct: 197 GEYRYTNFGSIRENDFGQLPGGFTFEGSRRLQQNQVQVGFSYKF 240
>gi|86748027|ref|YP_484523.1| outer membrane autotransporter [Rhodopseudomonas palustris HaA2]
gi|86571055|gb|ABD05612.1| outer membrane autotransporter [Rhodopseudomonas palustris HaA2]
Length = 638
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 65/228 (28%), Gaps = 19/228 (8%)
Query: 29 YLPRKIDLFN--EADNNVEYQDDEYGIWSGNYVGLHISRLYETHP-LADTINRKTYNSLL 85
+ P + W+G +VG L T
Sbjct: 407 FAPEAVAAAPLYTKAAKAPILVHSAYNWTGFFVGGSFGVLNGRTDWTFQPGGTTTDPRFA 466
Query: 86 PNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-------FYRLKEKYFIYGDVVLKAGY 138
G ++G++ Q +V G+ A + F+ + G K GY
Sbjct: 467 GAIGGGQIGYDYQFGKWVVGVEGALNATNANGARPCPSSVFFTCETNVSWMGTATAKLGY 526
Query: 139 S-VDSLLIYGMGGFGGAYVIDS---SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ D L Y GG + + + + +GIG ++ ++
Sbjct: 527 AFWDRSLWYVRGGGAFGDLKVTTTCNTGPFNPLGLAGCGENASRSRAGWTIGIGSEFALS 586
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ Y +D K N I+++G+N F
Sbjct: 587 KNWTVRTETNYFDMGRERYVLPT-----STIDVKQNGFISTVGVNYRF 629
>gi|296445473|ref|ZP_06887430.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296257039|gb|EFH04109.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 210
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 68/196 (34%), Gaps = 33/196 (16%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCH 109
W+G YVGL+ ++ AD Y+ ++ G ++G+N+QL FV G+
Sbjct: 41 VFSWTGAYVGLNAGGAFK----ADNGLGGDYSGVVG---GGQIGYNLQLSPLFVVGLETD 93
Query: 110 TTAAKDD-STFYRLKEKYFIYGDVVLKAGYSV--DSLLIYGMGGFGGAYVIDSSLEKVES 166
+T++ + +G V + G ++ LL YG GGF V
Sbjct: 94 FQGTSLSRNTWFGQQVSLPWFGTVRGRVGVTLFDSQLLAYGTGGFAYGEVK--------- 144
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ G G+++ + S Y Y N
Sbjct: 145 ------APWSSDTHTGWTAGGGVEWAFLPNWSAKVEYLYTDLQ-------NNSGWGWVAP 191
Query: 227 RKGNAHIASLGINMHF 242
++ H G+N HF
Sbjct: 192 QRAKFHTVRAGVNYHF 207
>gi|85714675|ref|ZP_01045662.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
gi|85698560|gb|EAQ36430.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
Length = 222
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 68/192 (35%), Gaps = 24/192 (12%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHT 110
W+G Y+G HI + N+ G+++G++ Q ++VFG+ +
Sbjct: 41 YNWTGFYLGGHIGGAFGGANNIFAPGVAFNNNDGVFMGGVQVGYDTQFSPNWVFGLEANY 100
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ S F G V + GY+ L+Y GG+G A ++
Sbjct: 101 SFLDTGSFFANRG-----LGSVTGRLGYTWGPALLYVKGGYGWADSRFTNGFGGNGGRDG 155
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+G GL+Y+ + S Y+Y ++ + + +
Sbjct: 156 ------------YTVGGGLEYLFTQNWSGKVEYQYYDLGTVNLVAP------VVANFRND 197
Query: 231 AHIASLGINMHF 242
H +G+N F
Sbjct: 198 QHTIKVGLNYRF 209
>gi|312115998|ref|YP_004013594.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311221127|gb|ADP72495.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 203
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 75/235 (31%), Gaps = 54/235 (22%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
+ S+V + + DLY + + W+G Y GL++ +
Sbjct: 10 LTLASVVAIASANSADLYRGQAGGYKDGPIVAPVAT------WTGFYAGLNVGYGWNDDA 63
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQ----LEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
AD I +N Q V G+ + + +K
Sbjct: 64 DADGIIGGGQIG-----------YNWQGAFGTSPLVLGVETDIQGSDIKNDN---DDKLN 109
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
+G V + GY++ + L+Y GGF D + +G
Sbjct: 110 YFGTVRGRLGYALGNSLVYATGGFAYGEFD-----------------GADKTSTGYTVGG 152
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+++ ++S+ A Y Y + +N+ + + +G+N HF
Sbjct: 153 GVEHKFTPNLSVKAEYLYTDLGDNDSDNA-------------DFNTVRVGLNYHF 194
>gi|77917690|ref|YP_355505.1| outer membrane immunogenic protein [Pelobacter carbinolicus DSM
2380]
gi|77543773|gb|ABA87335.1| outer membrane immunogenic protein [Pelobacter carbinolicus DSM
2380]
Length = 225
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 68/205 (33%), Gaps = 18/205 (8%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTY--NSLLPNGLGIELGHNIQLEDFVFG 105
+ +SG Y+G + + +D+ N + G+ GHN +++ + G
Sbjct: 29 AEALSDYSGPYIGGFVGHSWADLEYSDSWNPGYDLNADIEGFVGGLYFGHNYMIDNIMLG 88
Query: 106 INCHTTAAKDDSTFYRLKE-------KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ + +AG+ ++ L Y GG
Sbjct: 89 FEADAGIGDLGEGADKNNSYNDWSAFDIDWDAHLRARAGFVYNTTLFYVAGGLA------ 142
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+ KV D++ + G + +G G++ + ++ Y Y + S + ++
Sbjct: 143 --VAKVAVDDTDSGYGGDNATHFGWTIGAGIEQKITEHLTARIEYLYDDYGSESYSIEDS 200
Query: 219 -KSDVERVDRKGNAHIASLGINMHF 242
D D H A LG+ F
Sbjct: 201 WWGDTYSADIDLEIHTARLGLAYSF 225
>gi|323138001|ref|ZP_08073075.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242]
gi|322396720|gb|EFX99247.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242]
Length = 702
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 62/223 (27%), Gaps = 31/223 (13%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSL-----------LPNGLGIELGHNIQL 99
W G Y+G + + H + S +G ++G+N Q
Sbjct: 25 VFNWVGMYLGASLGAAFPLHGGERLQAGSGFGSPVYDLYPAGATRPGVTVGAQVGYNWQD 84
Query: 100 EDFVFGINCHTTAAKDDSTFYRL------------------KEKYFIYGDVVLKAGYSVD 141
+V+G + L + + + G++ D
Sbjct: 85 GPWVWGFETDLSLLDGRRGPNGLFASSDAYAPGLPVYTLHPGSSANYFASIRGRVGFAYD 144
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR--FDGHGSSVVLGIGLDYMVNYDISL 199
L+Y GG + +D V G G +Y + S
Sbjct: 145 RALLYLTGGVAAGGARGPETLTLGADGPDAIFEAPWSQSSRMKYVFGAGFEYAFADNWSA 204
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A Y ++ +++ N + + I G+N HF
Sbjct: 205 RAEYLFLNQSLNTQTFDNGAGYLYASRIRNENQILRFGLNYHF 247
>gi|323136250|ref|ZP_08071332.1| outer membrane protein Omp31 precursor [Methylocystis sp. ATCC
49242]
gi|322398324|gb|EFY00844.1| outer membrane protein Omp31 precursor [Methylocystis sp. ATCC
49242]
Length = 226
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 74/245 (30%), Gaps = 27/245 (11%)
Query: 4 NGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHI 63
N AL L+ + P D +WSG YVG+H
Sbjct: 3 NKVAALLAPFVLAAGPSLSADLPRGAAPPPGDY---------VAPPPAFVWSGFYVGVHG 53
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYR- 121
+ + +G+ G+N + F+ G+ +
Sbjct: 54 GYAFSSFEDDANTLI---GGADGGLIGVTGGYNYMVTPQFLLGVEADFAFTGVSKSNAPF 110
Query: 122 ----LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ + + +AGYS+D L+Y GGF + A +
Sbjct: 111 FGVIARGEVDDMFTLRGRAGYSIDRALLYVTGGFAASKNAIGLTTPFTGFYGYQATFQP- 169
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
LG G++YM+ ++S Y + S + + + V N G
Sbjct: 170 ----GWALGAGVEYMITSNLSAKGEYIFTSTGSDSYFDFSPNALTSAV----NTSSIKGG 221
Query: 238 INMHF 242
+N HF
Sbjct: 222 LNFHF 226
>gi|332717300|ref|YP_004444766.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
gi|325063985|gb|ADY67675.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
Length = 219
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 59/195 (30%), Gaps = 21/195 (10%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRK-TYNSLLPNGLGIELGHNIQLED-FVFGINCHTT 111
W+G G+ + + + T G +G N L + +V G+
Sbjct: 40 WTGFTAGVQAGYGWNNNDASIVGLPGQTSADFDGALAGGFVGFNYDLGNSWVVGLEADFE 99
Query: 112 AAKDDST----FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
D + + G V + GY+ D L+YG G+ A
Sbjct: 100 KNWGDDSATILGTGFDYGFDWQGSVRGRVGYAFDRALVYGTAGWAYAR----------GY 149
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ +G+GLDY + YRY + A ++
Sbjct: 150 AEVPGIADVKETFNGYTVGVGLDYAFTDMVFGRVEYRYTDFGDKDFDFGGAA-----INA 204
Query: 228 KGNAHIASLGINMHF 242
+ H +G+ + F
Sbjct: 205 DVDQHAIRVGLGVKF 219
>gi|163851436|ref|YP_001639479.1| carbohydrate-selective porin OprB [Methylobacterium extorquens PA1]
gi|163663041|gb|ABY30408.1| Carbohydrate-selective porin OprB [Methylobacterium extorquens PA1]
Length = 703
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 40/230 (17%), Positives = 61/230 (26%), Gaps = 35/230 (15%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETH-----------------PLADTINRKTYN 82
A + E + WSG Y G+ S D +
Sbjct: 32 AADLAERARPRFIDWSGFYAGVQGSAGASFGNYDFGPTTIGSRRVRSISTGDATGSRDLG 91
Query: 83 SLLPNGLGI-ELGHNIQLEDFVFGINCH----------------TTAAKDDSTFYRLKEK 125
+G G N Q V+GI D F ++EK
Sbjct: 92 GDATTAVGGAFAGWNWQDGALVYGIEADLVGANLKRGARSDATGFGYEGIDPPFALIREK 151
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
++G + GY+ + LIY G GA + + A + L
Sbjct: 152 TDVFGAARARLGYAFGNNLIYATAGLTGANGRVLA-TYPDLAGGPTATATRNVSYLGFTL 210
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
G G+ + V+ +SL YRY + S
Sbjct: 211 GAGVQFAVDPHLSLGIDYRYSDLGESGRFGLGTLPGPDGGPVTTRTSFVS 260
>gi|218530244|ref|YP_002421060.1| carbohydrate-selective porin OprB [Methylobacterium
chloromethanicum CM4]
gi|218522547|gb|ACK83132.1| Carbohydrate-selective porin OprB [Methylobacterium
chloromethanicum CM4]
Length = 703
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 60/221 (27%), Gaps = 35/221 (15%)
Query: 49 DEYGIWSGNYVGLHISRLYETH-----------------PLADTINRKTYNSLLPNGLGI 91
+ WSG Y G+ S D + +G
Sbjct: 41 PRFIDWSGFYAGVQGSAGASFGNYDFGPTTIGSRRVRSISTGDATGSRDLGGDATTAVGG 100
Query: 92 -ELGHNIQLEDFVFGINCH----------------TTAAKDDSTFYRLKEKYFIYGDVVL 134
G N Q V+GI D F ++EK ++G
Sbjct: 101 AFAGWNWQDGALVYGIEADLVGANLKRGARSDAMGFGYEGIDPPFALIREKTDVFGAARA 160
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ GY+ + LIY G GA + + A + LG G+ + V+
Sbjct: 161 RLGYAFGNNLIYATAGLTGANGRVLA-TYPDLAGGPTATATRNVSYLGFTLGAGVQFAVD 219
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+SL YRY A ++ S
Sbjct: 220 PHLSLGIDYRYSDLGESGRFGLGALPGLDGGPVTTRTSFVS 260
>gi|116255059|ref|YP_770894.1| putative outer membrane protein precursor [Rhizobium leguminosarum
bv. viciae 3841]
gi|115259707|emb|CAK11704.1| putative outer membrane protein precursor [Rhizobium leguminosarum
bv. viciae 3841]
Length = 216
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 71/242 (29%), Gaps = 26/242 (10%)
Query: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
M+ +F +V + + A DL + Y W+G Y G
Sbjct: 1 MSITKRKIVFVIVSTLMA--RGASAADLADH-------SVPSAPSYDAPGTFSWAGAYAG 51
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
LH +N+ +G ++G+N Q VFG + ++
Sbjct: 52 LHGGVAAPK--------FNPFNNDRAPAVGAQVGYNFQAGPGVFGAELEGSYLNNEVRVP 103
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
K + G KAG +D IYG G S K +
Sbjct: 104 GGKVESRFRGAAKAKAGLGLDRTFIYGTAGVTTTEFEGRRPVF----GSDKWKSGPESWK 159
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ G G+++ +S Y Y+ N S N + GIN
Sbjct: 160 QGYLFGGGVEHAFPGGVSAKIEYNYV-----INNAVPTPSGGVNSGSDLNDSVIKAGINF 214
Query: 241 HF 242
F
Sbjct: 215 RF 216
>gi|254561199|ref|YP_003068294.1| outer membrane porin [Methylobacterium extorquens DM4]
gi|254268477|emb|CAX24434.1| Putative outer membrane porin (OMPA-like) [Methylobacterium
extorquens DM4]
Length = 703
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 61/230 (26%), Gaps = 35/230 (15%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETH-----------------PLADTINRKTYN 82
A + E + WSG Y G+ S D +
Sbjct: 32 AADLAERAGPRFIDWSGFYAGVQGSAGASFGNYDFGPTTIGSRRVRSISTGDATGSRDLG 91
Query: 83 SLLPNGLGI-ELGHNIQLEDFVFGINCH----------------TTAAKDDSTFYRLKEK 125
+G G N Q FV+G+ D F ++EK
Sbjct: 92 GDATTAVGGAFAGWNWQDGAFVYGVEADLVGANLKRGARSDATGFGYEGIDPPFALIREK 151
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
++G + GY+ + LIY G GA + + + L
Sbjct: 152 TEVFGAARARLGYAFGNNLIYATAGLTGANGRVLA-TYPDLAGGPTVTATRNVSYLGFTL 210
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
G G+ + V+ +SL YRY + S
Sbjct: 211 GAGVQFAVDPHLSLGIDYRYSDLGESGRFGLGTLPGPDGGPVTTRTSFVS 260
>gi|319899124|ref|YP_004159217.1| Hemin binding protein d [Bartonella clarridgeiae 73]
gi|319403088|emb|CBI76643.1| Hemin binding protein d [Bartonella clarridgeiae 73]
Length = 303
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/313 (11%), Positives = 74/313 (23%), Gaps = 93/313 (29%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
++++ + + A D +P + + W+G Y G H+
Sbjct: 4 LTTSIFALLLVSEAQAADFVIPYQSSTIPTV------ISPPHFSWTGIYFGGHVGGFEGP 57
Query: 70 H---------PLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTF 119
G+ G + + + V G + +
Sbjct: 58 STSYMSTQGERQKLLFKNNPSPKFSGVIGGLYAGASFDVNNGLVLGFDTDINWSGAKDEK 117
Query: 120 Y--------------------------------------RLKEKYFIYGDVVLKAGYSVD 141
+ K G ++ G+ D
Sbjct: 118 SVDMDSFVMALRKMDNVSNKDNVSNKIFPGFSLEQFISLKQTLKQKWVGATRVRIGFGFD 177
Query: 142 SLLIYGMGGFGGAYVIDSSL--------------------------------EKVESDNS 169
++ Y GG ++ D + + +S
Sbjct: 178 RIMPYVAGGVAYTHLKDVYVMETVTQETLKTGIRQSSQSSQSSQSSQSSQSSQSSQSSQL 237
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +G GLD V ++ L A YRY + ER K
Sbjct: 238 DFSMESEKKTMIGFTIGGGLDLAVTDNLILRAEYRYSDFNNKEF-------TKERFTIKY 290
Query: 230 NAHIASLGINMHF 242
++ S+G+ F
Sbjct: 291 KSNGFSVGVAYKF 303
>gi|296447726|ref|ZP_06889642.1| hypothetical protein MettrDRAFT_3358 [Methylosinus trichosporium
OB3b]
gi|296254758|gb|EFH01869.1| hypothetical protein MettrDRAFT_3358 [Methylosinus trichosporium
OB3b]
Length = 840
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/252 (15%), Positives = 71/252 (28%), Gaps = 39/252 (15%)
Query: 30 LPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINR----------- 78
I + + W+ YVGL+ + P I
Sbjct: 579 ASNPISEMFGVSSPLAPPPPSPTGWNDVYVGLNGGGAWSNPPTDVRIWPIGAAPASPFVT 638
Query: 79 ------KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD-------------STF 119
N L G++ G N Q + G+ + ST+
Sbjct: 639 TIGSPLDNGNHLAGFIGGLQAGINQQAAGVLMGLEADLHGVSGNTDTRWRMGIKDAISTY 698
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYV---IDSSLEKVESDNSKNAKGR 175
G + + GY L IYG GG V S ++V
Sbjct: 699 ASRTTTLNYLGTIRGRLGYLATPTLAIYGTGGLAYGGVISAGIISSQRVNGGALSFNFPA 758
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD-----VERVDRKGN 230
F +G G+++ ++ D S+ Y + + A+ + + +
Sbjct: 759 FQDSLLGWTVGAGVEWALSPDWSVKIDYLRYDLGRATSSPYAAQPNRLFQYAMTTSTRFD 818
Query: 231 AHIASLGINMHF 242
++ G+N HF
Sbjct: 819 GNLIHAGVNRHF 830
>gi|159185257|ref|NP_355480.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|159140518|gb|AAK88265.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 209
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 68/202 (33%), Gaps = 24/202 (11%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
+ +Y + WSG YVG H S G++ G+N Q
Sbjct: 32 QQSFDYGNQPAFSWSGAYVGAHGGVASPK--------FSPLASGRGLTGGVQAGYNFQFG 83
Query: 101 DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
V G + +D+ + + G LKAG ++D L+YG G D
Sbjct: 84 SGVVGAEVEGSYLGNDARVPNGRLRERFRGAAKLKAGVALDHTLLYGTAGLTTTKFKD-- 141
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
N DG ++G G++ +S Y Y+ + S+ +S
Sbjct: 142 ---------GNGVTGPDGWKQGYLVGAGVEQSFGGGLSAKFEYNYVSTGNVATTTSSGRS 192
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+ D H+ G+N F
Sbjct: 193 KTDVSD-----HVIKAGLNYRF 209
>gi|222087507|ref|YP_002546044.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221724955|gb|ACM28111.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 204
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 61/194 (31%), Gaps = 21/194 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
WSG Y+G+H + LG G+N Q + V G++ +
Sbjct: 31 SVFTWSGPYLGVHGGGAITKGNFK-FGSGDQSEDFKGGFLGNFFGYNYQFDKVVVGVDGN 89
Query: 110 TTAAKDDSTFYRLKE-KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
++ G V + GY+ D+LLIYG G+ A +
Sbjct: 90 IDYNWNNKAVANASSVGTDWSGAVRGRVGYAFDNLLIYGAAGWTAARGFADVSGSGDGKV 149
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ G G+DY +I A YRY + + V
Sbjct: 150 VFS----------GWTAGTGVDYAFTNNIFARAEYRYSDFGSKEL---------QGVKSD 190
Query: 229 GNAHIASLGINMHF 242
+LG+ + F
Sbjct: 191 LTEQSINLGVGLKF 204
>gi|319408066|emb|CBI81720.1| Hemin-binding protein C [Bartonella schoenbuchensis R1]
Length = 287
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 74/296 (25%), Gaps = 72/296 (24%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L V ++ + A + +P+ W+G Y+G I
Sbjct: 4 KYLITVSAFVLLAISTVQAENGTIPQ-----ESISVTPSVIVTPSFSWTGFYLGGQIGIF 58
Query: 67 YETHPLADTINRKTY------------NSLLPNGLGIELGHNIQLED-FVFGINCHTTAA 113
L+ + L G G N+ L + F+ G++ +
Sbjct: 59 SNKIDLSSGYLKNDDVEKWALIRKDFMPKLSGVVGGFYAGANVSLGNSFIIGVDTDMVLS 118
Query: 114 KDDS----------------------------------------------TFYRLKEKYF 127
Y K
Sbjct: 119 DKKDIKTVKINDYGQNEELRNENTARDSEGMVAASDCGIYNENIVSKIKFATYNHILKQK 178
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL-EKVESDNSKNAKGRFDGHGSSVVLG 186
G ++ G++ D ++ Y GG + D L E + G LG
Sbjct: 179 WAGATRVRVGFAADHVMPYVAGGISYTQLQDVLLRSSQEQGQIVDNTVGGTGTMIGYTLG 238
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+D+++ + L YRY S V+ + +G+ F
Sbjct: 239 AGVDFVMIGNTILRTEYRYSDFGKKQFAKS-------GVEHSYKTNDFRVGVAYKF 287
>gi|146425515|emb|CAM89327.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425525|emb|CAM89318.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425535|emb|CAM89309.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425545|emb|CAM89300.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425565|emb|CAM89282.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425575|emb|CAM89273.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425585|emb|CAM89264.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425595|emb|CAM89255.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425605|emb|CAM89246.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425615|emb|CAM89237.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425625|emb|CAM89228.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425635|emb|CAM89219.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425645|emb|CAM89210.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425655|emb|CAM89201.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425665|emb|CAM89192.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425675|emb|CAM89183.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425685|emb|CAM89174.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425695|emb|CAM89165.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425705|emb|CAM89156.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425715|emb|CAM89147.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425725|emb|CAM89138.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425735|emb|CAM89129.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425745|emb|CAM89120.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425755|emb|CAM89111.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425765|emb|CAM89102.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425775|emb|CAM89093.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425785|emb|CAM89084.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425795|emb|CAM89075.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425805|emb|CAM89066.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425815|emb|CAM89057.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425825|emb|CAM89048.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425835|emb|CAM89039.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425845|emb|CAM89030.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425855|emb|CAM89021.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425865|emb|CAM89012.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425875|emb|CAM89003.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425885|emb|CAM88994.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425895|emb|CAM88985.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425905|emb|CAM88976.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146426370|emb|CAM89822.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426380|emb|CAM89813.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426390|emb|CAM89804.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426400|emb|CAM89795.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426410|emb|CAM89786.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426420|emb|CAM89777.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426430|emb|CAM89768.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426440|emb|CAM89759.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426450|emb|CAM89750.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426460|emb|CAM89741.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426470|emb|CAM89732.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426480|emb|CAM89723.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426490|emb|CAM89714.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426500|emb|CAM89705.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426510|emb|CAM89696.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426520|emb|CAM89687.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426530|emb|CAM89678.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426540|emb|CAM89669.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426550|emb|CAM89660.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426560|emb|CAM89651.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426570|emb|CAM89642.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426580|emb|CAM89633.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426590|emb|CAM89624.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426600|emb|CAM89615.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426610|emb|CAM89606.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426620|emb|CAM89597.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426630|emb|CAM89588.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426640|emb|CAM89579.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426650|emb|CAM89570.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426660|emb|CAM89561.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426670|emb|CAM89552.2| 25 kDa outer membrane protein [Brucella suis ATCC 23445]
gi|146426680|emb|CAM89543.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426690|emb|CAM89534.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426700|emb|CAM89525.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426710|emb|CAM89516.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426720|emb|CAM89507.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426730|emb|CAM89498.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426740|emb|CAM89489.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426750|emb|CAM89480.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426760|emb|CAM89471.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426770|emb|CAM89462.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426780|emb|CAM89453.2| 25 kDa outer membrane protein [Brucella suis 1330]
gi|146426900|emb|CAM89345.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146426910|emb|CAM89336.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146427366|emb|CAM90326.2| 25 kDa outer membrane protein [Brucella sp. 5/95]
gi|146427376|emb|CAM90317.2| 25 kDa outer membrane protein [Brucella sp. 59/94]
gi|146427386|emb|CAM90308.2| 25 kDa outer membrane protein [Brucella sp. UK28/03-13840]
gi|146427396|emb|CAM90299.2| 25 kDa outer membrane protein [Brucella sp. F7/99]
gi|146427406|emb|CAM90290.2| 25 kDa outer membrane protein [Brucella sp. F10/99]
gi|146427416|emb|CAM90281.2| 25 kDa outer membrane protein [Brucella sp. F9/99]
gi|146427426|emb|CAM90272.2| 25 kDa outer membrane protein [Brucella sp. F8/99]
gi|146427436|emb|CAM90263.2| 25 kDa outer membrane protein [Brucella sp. F6/99]
gi|146427446|emb|CAM90254.2| 25 kDa outer membrane protein [Brucella sp. UK5/01]
gi|146427456|emb|CAM90245.2| 25 kDa outer membrane protein [Brucella sp. UK40/99]
gi|146427466|emb|CAM90236.2| 25 kDa outer membrane protein [Brucella sp. UK13/99]
gi|146427476|emb|CAM90227.2| 25 kDa outer membrane protein [Brucella sp. 61/94]
gi|146427486|emb|CAM90218.2| 25 kDa outer membrane protein [Brucella sp. 4/96]
gi|146427496|emb|CAM90209.2| 25 kDa outer membrane protein [Brucella sp. 55/94]
gi|146427506|emb|CAM90200.2| 25 kDa outer membrane protein [Brucella sp. UK24/00 (M192)]
gi|146427516|emb|CAM90191.2| 25 kDa outer membrane protein [Brucella sp. 44/94]
gi|146427526|emb|CAM90182.2| 25 kDa outer membrane protein [Brucella sp. 39/94]
gi|146427536|emb|CAM90173.2| 25 kDa outer membrane protein [Brucella sp. UK31/04]
gi|146427546|emb|CAM90164.2| 25 kDa outer membrane protein [Brucella sp. VLA04/06]
gi|146427556|emb|CAM90155.2| 25 kDa outer membrane protein [Brucella sp. VLA04/105]
gi|146427566|emb|CAM90146.2| 25 kDa outer membrane protein [Brucella sp. VLA04.72]
gi|146427576|emb|CAM90137.2| 25 kDa outer membrane protein [Brucella sp. VLA04.67]
gi|146427586|emb|CAM90128.2| 25 kDa outer membrane protein [Brucella sp. F96/2]
gi|146427596|emb|CAM90119.2| 25 kDa outer membrane protein [Brucella sp. F23/97]
gi|146427606|emb|CAM90110.2| 25 kDa outer membrane protein [Brucella sp. UK15/02]
gi|146427616|emb|CAM90101.2| 25 kDa outer membrane protein [Brucella sp. UK10/01]
gi|146427626|emb|CAM90092.2| 25 kDa outer membrane protein [Brucella sp. UK4/01]
gi|146427636|emb|CAM90083.2| 25 kDa outer membrane protein [Brucella sp. UK10/00]
gi|146427646|emb|CAM90074.2| 25 kDa outer membrane protein [Brucella sp. UK5/97]
gi|146427656|emb|CAM90065.2| 25 kDa outer membrane protein [Brucella sp. UK3/97]
gi|146427666|emb|CAM90056.2| 25 kDa outer membrane protein [Brucella sp. UK1/97]
gi|146427676|emb|CAM90047.2| 25 kDa outer membrane protein [Brucella sp. 2/96]
gi|146427686|emb|CAM90038.2| 25 kDa outer membrane protein [Brucella sp. 14/95]
gi|146427696|emb|CAM90029.2| 25 kDa outer membrane protein [Brucella sp. UK35/99]
gi|146427706|emb|CAM90020.2| 25 kDa outer membrane protein [Brucella sp. UK15/98]
gi|146427716|emb|CAM90011.2| 25 kDa outer membrane protein [Brucella sp. 52/94]
gi|146427726|emb|CAM90002.2| 25 kDa outer membrane protein [Brucella sp. 36/94]
gi|146427846|emb|CAM89894.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427856|emb|CAM89885.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427866|emb|CAM89876.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427876|emb|CAM89867.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427886|emb|CAM89858.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427896|emb|CAM89849.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427906|emb|CAM89840.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427916|emb|CAM89831.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427988|emb|CAM90407.2| 25 kDa outer membrane protein [Brucella sp. F5/02]
gi|146428001|emb|CAM90398.2| 25 kDa outer membrane protein [Brucella sp. F5/99]
gi|146428011|emb|CAM90389.2| 25 kDa outer membrane protein [Brucella sp. VLA05/8]
gi|146428021|emb|CAM90380.2| 25 kDa outer membrane protein [Brucella sp. VLA05/4]
gi|146428031|emb|CAM90371.2| 25 kDa outer membrane protein [Brucella sp. UK3/05]
gi|146428041|emb|CAM90362.2| 25 kDa outer membrane protein [Brucella sp. 14/94]
gi|146428051|emb|CAM90353.2| 25 kDa outer membrane protein [Brucella sp. UK2/2000]
gi|146428061|emb|CAM90344.2| 25 kDa outer membrane protein [Brucella sp. UK1/2000]
gi|146428071|emb|CAM90335.2| 25 kDa outer membrane protein [Brucella sp. UK43/99]
gi|170015689|emb|CAP05282.1| 25 kDa outer membrane protein [Brucella sp. BO1]
Length = 163
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 56/185 (30%), Gaps = 22/185 (11%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L V + + A D + + W+G Y GL++ +
Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYGWN 53
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ + K + G G N Q + V+G+ + + L+ K
Sbjct: 54 KAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGF 109
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + + GY ++ ++ Y G G+ + + N G G
Sbjct: 110 EGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAG 158
Query: 189 LDYMV 193
L+ +
Sbjct: 159 LEAKL 163
>gi|92117608|ref|YP_577337.1| putative outer-membrane protein precursor [Nitrobacter hamburgensis
X14]
gi|91800502|gb|ABE62877.1| putative outer-membrane protein precursor [Nitrobacter hamburgensis
X14]
Length = 251
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 68/219 (31%), Gaps = 19/219 (8%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINR--KTYNSLLPNGLGIELGH 95
WSG YVG + D + +G ++G+
Sbjct: 28 PRPYTKAPPMIAAIYDWSGFYVGANGGWGSSR-SCWDLTAPVAGGCHDATGGTIGGQIGY 86
Query: 96 NIQLEDFVFGINCHTTAAKDDSTFYRLK-------EKYFIYGDVVLKAGYSVDSLLIYGM 148
Q + VFG+ A + + + +G + GYS D+ L+Y
Sbjct: 87 RWQSNNLVFGLEAQGNWADLNGRNVSIDFSRFTNHSRLDAFGLFTGQIGYSWDATLLYVK 146
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
GG V++ + A + V+G+GL+Y + SL Y +I
Sbjct: 147 GGAAVTSNRYR---SVDNVSGLQAADSVNDTRWGGVVGVGLEYGFAPNWSLGFEYDHIFM 203
Query: 209 HIHSVNNSNA------KSDVERVDRKGNAHIASLGINMH 241
S N + + + + + + IN
Sbjct: 204 GNSSHTFINNGVIGAPGTTFGTDNIRQDVDLVTARINYR 242
>gi|148253080|ref|YP_001237665.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146405253|gb|ABQ33759.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 258
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 68/235 (28%), Gaps = 30/235 (12%)
Query: 34 IDLFNEADNNVEYQDDEY---GIWSGNYVGLHISRL---------YETHPLADTINRKTY 81
D N + WSG YVG+++ + L +
Sbjct: 20 ADQTERVYYNYSRPKPVFEPNYDWSGFYVGVNVGGGKAHACWDDAFSFGVLNSPAISEGC 79
Query: 82 NSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR-------LKEKYFIYGDVVL 134
+S G + G+ Q V G+ A + + G
Sbjct: 80 HSTSGAIAGGQAGYRWQSAFAVLGVEAQGDWANLRGSNISQLDPTLTNRTITDAIGLFTG 139
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+AG + ++L Y GG L S + R G +G G++
Sbjct: 140 QAGAAWQNVLWYIKGGAAITNDKYDGLITGTSVLND----RASGTRWGGTIGTGIEIGFA 195
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG-------INMHF 242
+ S+ Y ++ S++ ++ + V + + G +N F
Sbjct: 196 PNWSVGIEYDHLFIPSRSISFTSLNAAVAPIGMQTRVDNVREGVDMATVRVNYRF 250
>gi|222102056|ref|YP_002546646.1| hypothetical protein Arad_12130 [Agrobacterium radiobacter K84]
gi|221728173|gb|ACM31182.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 205
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 56/205 (27%), Gaps = 26/205 (12%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
+++ E Q WSG Y+G + SL G +G+N
Sbjct: 27 DQSAPQPEQQAYSAYNWSGFYLGAQGGYSWNKAKY-----LGADQSLNTGSAGAHVGYNF 81
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
Q + ++GI D K + GY++D
Sbjct: 82 QTGNIIYGIENDFNYNFDKGN----KADLQWDASGRARVGYALDRT----------LLFA 127
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ L A G+ D G G++ + +I + YRY +
Sbjct: 128 TAGLAAAGGKVDAPAIGKKDDILIGWTAGAGVERALTDNILIRGEYRYSDFGKKDFGSDI 187
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
D LG + F
Sbjct: 188 G-------DFSATQQKIILGASYKF 205
>gi|323138620|ref|ZP_08073687.1| porin [Methylocystis sp. ATCC 49242]
gi|322396108|gb|EFX98642.1| porin [Methylocystis sp. ATCC 49242]
Length = 305
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/302 (14%), Positives = 84/302 (27%), Gaps = 73/302 (24%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
A+ + +V +LA DL + +W+G YVGL+
Sbjct: 2 KRTAISLSALVLVVSAGAALAADL---------PSYKAPLPPPPPPPPMWTGFYVGLNAG 52
Query: 65 RLYETHPLADTI---NRKTYNSLLPNGL-----------------------GIELGHNIQ 98
++ + + + + P GL G ++G+N Q
Sbjct: 53 GMWSNSSVTNLTTIPGFINFGGVSPLGLNHAISAAVGANAAIPTNTSGFIGGGQIGYNWQ 112
Query: 99 LE-DFVFGINCHTTAAKDDSTFYRLKE--------------------KYFIYGDVVLKAG 137
F+ GI ++ + + G V + G
Sbjct: 113 FGGSFLAGIEADIQGVAGSNSNSTVTTIATGAGFPANPTMTTMTASRRLDYIGTVRGRLG 172
Query: 138 YSVDSLL-IYGMGGFGGAYVIDSSL-------EKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ L +YG GG V + ++ + G F G G+
Sbjct: 173 WLFTPTLLVYGTGGLAYGGVTSNVSLVGAETPAAGPNNGVWFSNGAFSDTRVGWTAGGGV 232
Query: 190 DYMVNYDISLSASYRYIPHHI---------HSVNNSNAKSDVERVDRKGNAHIASLGINM 240
++M + S Y Y + + + + N +I G+N
Sbjct: 233 EWMFMPNWSAKVEYLYYDLGRVTYAMAPIVQTFPAAPYWTHFPGASTRFNGNIVRAGLNY 292
Query: 241 HF 242
HF
Sbjct: 293 HF 294
>gi|323139011|ref|ZP_08074071.1| porin [Methylocystis sp. ATCC 49242]
gi|322395765|gb|EFX98306.1| porin [Methylocystis sp. ATCC 49242]
Length = 291
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 78/277 (28%), Gaps = 51/277 (18%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA--- 73
I LA+ DL + + V +W G YVGL+ + +
Sbjct: 4 IAFSVAVLALTAGSALAADLPSRKEAPVYVPPPPPPMWVGFYVGLNAGGTWAASTNSASD 63
Query: 74 ------------------DTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAK 114
+ + + G ++G+N Q F+ G+
Sbjct: 64 AWGLANGGTPIHGWVAAASAASWQNGGNNSGFIGGGQIGYNWQFMNSFIAGVEADIQGVA 123
Query: 115 DDS-------------------TFYRLKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGGA 154
+S TF + G V + G+ L+YG GG
Sbjct: 124 GNSPNRDIFGSSFDPISGTNIVTFGNRSSRLDYLGTVRGRLGWLFTPTMLVYGTGGLAYG 183
Query: 155 YVIDSSLEKVESDNS---KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
V S+ A F G G+++M + S Y Y
Sbjct: 184 GVSTSATFVTSEIGFPFNSVASASFADTRVGWTAGGGIEWMFMPNWSAKVEYLYYDLGTV 243
Query: 212 SVNNSNAKSDV------ERVDRKGNAHIASLGINMHF 242
S + V V ++ N ++ G+N HF
Sbjct: 244 SATAVAVEPTVVDWAYSTTVRQRFNGNMVRAGLNYHF 280
>gi|15888468|ref|NP_354149.1| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|18139945|gb|AAL60203.1|AF445083_1 outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|15156164|gb|AAK86934.1| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 218
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 66/201 (32%), Gaps = 26/201 (12%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
Q WSG Y+G ++ + ++ G +N+Q V+G
Sbjct: 39 QPAAVKDWSGAYLGGTVNYDWGRFSSSNDGRDAKGFGGGVYGG-----YNMQSGQIVYGA 93
Query: 107 NCHTTAAKDDSTFYRL-----KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
+ + + + K + G + + GY ++ L+YG G
Sbjct: 94 EADVNMGDEKGSAGTVAGRAVEGKQGVNGSLRGRVGYDMNPFLLYGTAGLA--------- 144
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
V + ++ + +G G++ MV +I+ YRY + N
Sbjct: 145 --VSDNKVRDGVNKDSATALGYTVGAGVEAMVTDNITARLEYRYSDYQKKDYTLGN---- 198
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ R + H GI + F
Sbjct: 199 -DAFSRGFDDHSVKAGIGVKF 218
>gi|218517219|ref|ZP_03514059.1| outer membrane protein [Rhizobium etli 8C-3]
Length = 153
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 53/171 (30%), Gaps = 19/171 (11%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
++ G G+N Q ++ V GI + ++ G
Sbjct: 2 ISAPGGASASEDFNGGVFGGFAGYNFQFDNIVVGIEGNLEYNWNEEEALGADVGTDWAGA 61
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
V + GY+ D LIYG G+ + + +G G+D+
Sbjct: 62 VRGRVGYAFDKALIYGAAGWAATR----------GYVDAPGFDKETETFNGYTVGAGVDF 111
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +I YRY + D+ VD + H GI + F
Sbjct: 112 AITNNIFARGEYRYNDYGER---------DILGVDVDLDQHELKFGIGVKF 153
>gi|220979417|gb|ACL97990.1| outer membrane protein B3 [Rhizobium leguminosarum bv. viciae]
Length = 216
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/237 (18%), Positives = 71/237 (29%), Gaps = 24/237 (10%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
F V +S+++ + A DL + Y W+G Y GLH
Sbjct: 4 IKRKIFSVGVSMLMACGASAADLADH-------SVPSAPSYDAPGTFSWAGAYAGLHGGV 56
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK 125
+N+ +G ++G+N Q VFG + ++ +
Sbjct: 57 AASK--------FNPFNNGRAPAVGAQVGYNFQAGSGVFGAELEGSYLNNEVRVPVGNVE 108
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
G KAG D +YG G S K D +
Sbjct: 109 SRFRGAAKAKAGLGFDRTFVYGTAGV----TTTEFEGHRLVSGSDKWKSGPDSWKHGYLF 164
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G G+++ + +S Y Y+ N S N ++ G+N F
Sbjct: 165 GGGVEHAFSGGVSAKIEYNYV-----INNAVPTTSGGISSRSDLNDNVIEAGLNFRF 216
>gi|146427796|emb|CAM89939.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427806|emb|CAM89930.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427816|emb|CAM89921.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427826|emb|CAM89912.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427836|emb|CAM89903.2| 25 kDa outer membrane protein [Brucella canis]
Length = 163
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 56/185 (30%), Gaps = 22/185 (11%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L V + + A D + + W+G Y GL++ +
Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYGWN 53
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ + K + G G N Q + V+G+ + + L+ K
Sbjct: 54 KAKTSTVGSIKPDD----WKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGF 109
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + + GY ++ ++ Y G G+ + + N G G
Sbjct: 110 EGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAG 158
Query: 189 LDYMV 193
L+ +
Sbjct: 159 LEAKL 163
>gi|325292505|ref|YP_004278369.1| outer membrane protein [Agrobacterium sp. H13-3]
gi|325060358|gb|ADY64049.1| outer membrane protein [Agrobacterium sp. H13-3]
Length = 218
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 65/211 (30%), Gaps = 27/211 (12%)
Query: 38 NEADNNVEYQDDE-YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN 96
+ V Y W+G Y+G + + ++ G +N
Sbjct: 29 DVPQAPVAYDQPAPVKNWTGAYLGGTANYDWGRFSSSNDGRDAKGAGGGIYGG-----YN 83
Query: 97 IQLEDFVFGINCHTT-----AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
+Q V+G + ++ K + G + + GY ++ L+YG G
Sbjct: 84 MQNGQIVYGAEADVNLGRERGSAGTVGGNAVEGKQGVNGSLRARVGYDMNPFLLYGTAGL 143
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ +A + +G G++ MV +I+ YRY +
Sbjct: 144 AASDNKVR-----------DATSKDSATALGYTVGAGVEAMVTDNITARLEYRYSDYQKK 192
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D R + H GI + F
Sbjct: 193 DYS-----LDSGAFSRGFDDHSVKAGIGVKF 218
>gi|227821981|ref|YP_002825952.1| outer membrane protein [Sinorhizobium fredii NGR234]
gi|227340981|gb|ACP25199.1| outer membrane protein [Sinorhizobium fredii NGR234]
Length = 216
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 78/233 (33%), Gaps = 26/233 (11%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+ + + SLA I E + + +W+G YVGL + L+
Sbjct: 5 VLVAMFGASLAAGPTYAADITEAPEPAPAILETTPTF-VWTGGYVGLQGGGGWLNSDLSV 63
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK----YFIYG 130
G G+N Q+ D+V G+ + +D +F + G
Sbjct: 64 P-GASASEDFSGGLFGAFAGYNYQMGDWVVGVEGDVSYNWNDKSFTVFGASTEVGTDVSG 122
Query: 131 DVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
V + GY+++ L+YG GG+ + + +G G+
Sbjct: 123 SVRGRVGYTLNEKALLYGTGGWAVTRGFVDVAGAP----------KEKETFNGWTIGGGI 172
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
DY + A YRY DV VD + H ++G+ + F
Sbjct: 173 DYAFTNSMFGRAEYRYNDFGDK---------DVGGVDVDLDQHQFTVGVGVKF 216
>gi|319404477|emb|CBI78084.1| Hemin binding protein D [Bartonella rochalimae ATCC BAA-1498]
Length = 267
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 73/277 (26%), Gaps = 57/277 (20%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS--RLY 67
++ + A D +P ++ W+G Y G I
Sbjct: 4 LTASVFTLFSISIVQATDFVIP------YQSYTASPVVLSSTFSWTGFYFGGKIGVFSGQ 57
Query: 68 ETHPLADT--------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST 118
T D+ ++ L G+ G NI + + FV G + + T
Sbjct: 58 STSSFIDSNNVKHNIIFQNQSSPKLSGVVGGLYTGLNININNGFVLGFDTDINWSGAKDT 117
Query: 119 FY---------------------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ + + + G+S D ++ Y GG +
Sbjct: 118 KVIDIIASLKADNNKKSQIDFDIKQSLQQKWLSAIRGRIGFSFDRVMPYIAGGISVTKLQ 177
Query: 158 ------------DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+S + +G GLD+ + + L A Y Y
Sbjct: 178 STYLKFFVPSKNNSLTRSSLEKTPPVLSTSNSKIMNGYTIGGGLDFAITDNFILRAEYNY 237
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N+N ++ ++ G+ F
Sbjct: 238 SDFGKKEFVNNN-------MNVSYKSNAFYFGVACKF 267
>gi|75674527|ref|YP_316948.1| carbohydrate-selective porin OprB [Nitrobacter winogradskyi Nb-255]
gi|74419397|gb|ABA03596.1| carbohydrate-selective porin OprB [Nitrobacter winogradskyi Nb-255]
Length = 674
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 57/202 (28%), Gaps = 23/202 (11%)
Query: 53 IWSGNYVGLHISRLY--ETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCH 109
WSG YVG H L D N GI+ G+N++L + G+
Sbjct: 57 DWSGFYVGGHAGFGGGRSAATLFDPAPAAGRNVFGGLIGGIQAGYNVRLPSGLLLGLEAD 116
Query: 110 TTA----------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+ + + + ++ G + GY+ L Y GG A
Sbjct: 117 VSFPSYIESNSFVSGLATARSDITHQWDFIGTARARFGYAAGPWLAYATGGLAFAGDRYL 176
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ V G GL+Y S Y + V +A
Sbjct: 177 NDLPSGDQEKML------DARFGWVAGAGLEYAFAPYWSARLEYLHYQFEGTGVQFPSAA 230
Query: 220 SDVERVDRKGNAHIASLGINMH 241
+ N +G+N
Sbjct: 231 QYAATM----NFQSIRVGLNRR 248
>gi|153009238|ref|YP_001370453.1| hypothetical protein Oant_1908 [Ochrobactrum anthropi ATCC 49188]
gi|151561126|gb|ABS14624.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 212
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 26/233 (11%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
+ +++ + A + + + + N+ WSGNYVG +
Sbjct: 5 SITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVAAGP--HDWSGNYVGAQVGASSSRV 62
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIY 129
+ + G+ +G N+Q + VFG A+ + +
Sbjct: 63 -------PGPFTNRTGALGGVVVGKNMQSGNVVFGGELEGNFAEAEHRIGNGGSLQQSWN 115
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G+ K GY+ D L+YG G+G G ++G G+
Sbjct: 116 GNAKGKVGYAFDKTLVYGTAGYGVTRFKAKDNTTSAP-----------GWEGGALVGAGV 164
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ +S+ A Y + + + + H G+N F
Sbjct: 165 EQALSGPLSVKAEYDFQRFNDVKSRVNGVEQ-----RNNLKNHSIKAGLNYKF 212
>gi|146426790|emb|CAM89444.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426800|emb|CAM89435.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426810|emb|CAM89426.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426820|emb|CAM89417.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426830|emb|CAM89408.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426840|emb|CAM89399.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426850|emb|CAM89390.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426860|emb|CAM89381.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426870|emb|CAM89372.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426880|emb|CAM89363.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426890|emb|CAM89354.2| 25 kDa outer membrane protein [Brucella ovis]
Length = 163
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 57/185 (30%), Gaps = 22/185 (11%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L V + + A D + + W+G Y GL++ +
Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYGWN 53
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ + K + G G N Q + V+G+ + + + L+ K
Sbjct: 54 KAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGNAGYSWAKKSKDGLEVKQGF 109
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + + GY ++ ++ Y G G+ + + N G G
Sbjct: 110 EGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAG 158
Query: 189 LDYMV 193
L+ +
Sbjct: 159 LEAKL 163
>gi|261317611|ref|ZP_05956808.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis B2/94]
gi|265988645|ref|ZP_06101202.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis M292/94/1]
gi|261296834|gb|EEY00331.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis B2/94]
gi|264660842|gb|EEZ31103.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis M292/94/1]
Length = 134
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 45/138 (32%), Gaps = 7/138 (5%)
Query: 108 CHTTAAKDDST---FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ + D + K G V + G ++D + Y GG V +S
Sbjct: 1 LDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNVKNSVSLT- 59
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
D ++ + G G+DY ++ + YRY + + + VE
Sbjct: 60 --DGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVE- 116
Query: 225 VDRKGNAHIASLGINMHF 242
K H LG+ F
Sbjct: 117 ARNKFKTHDIRLGVAYKF 134
>gi|163868669|ref|YP_001609878.1| hemin binding protein E [Bartonella tribocorum CIP 105476]
gi|161018325|emb|CAK01883.1| hemin binding protein E [Bartonella tribocorum CIP 105476]
Length = 309
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 41/127 (32%), Gaps = 8/127 (6%)
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+S + K G ++ G S ++ Y GG D + D S N
Sbjct: 191 NSLTFNHTFKQKWTGATRVRLGLSAHRVMPYIAGGIAYGQFQDVLSTVITGDESFNKTSD 250
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
LG G+D+ + ++ + A YRY + ++ K +
Sbjct: 251 VTKTMVGYTLGGGVDFAMTDNLVVRAEYRYSDFGKKKFK--------DEIEIKYKTNDFR 302
Query: 236 LGINMHF 242
GI F
Sbjct: 303 AGIAYKF 309
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 37/146 (25%), Gaps = 26/146 (17%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
S++ P+ A D+ P E WSG Y G I
Sbjct: 5 FITASVFSLISPSILQAADVVAPE-----EPVHVVSEVVTSSDFSWSGFYFGGQIGGFSS 59
Query: 69 THPLAD-------------------TINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINC 108
+ ++ L G+ G N L + + G++
Sbjct: 60 KISGTTRDVDTPLYPDEESKNKPWVPLEKQYKPELSGFVGGLYAGVNFDLGNNLIVGLDT 119
Query: 109 HTTAA-KDDSTFYRLKEKYFIYGDVV 133
K D+ + E+ G
Sbjct: 120 DILLTEKKDTKTFIHTEESSASGSGT 145
>gi|146425555|emb|CAM89291.2| 25 kDa outer membrane protein [Brucella melitensis]
Length = 163
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 56/185 (30%), Gaps = 22/185 (11%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L V + + A D + + W+G Y GL++ +
Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYGWN 53
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ + K + G G N Q + V+G+ + + L+ K
Sbjct: 54 KAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGF 109
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + + GY ++ ++ Y G G+ + + N G G
Sbjct: 110 EGSLRARVGYDLNPVMPYLTAGIVGSQIKLN-----------NGLDDESKFRVGWTAGAG 158
Query: 189 LDYMV 193
L+ +
Sbjct: 159 LEAKL 163
>gi|323139010|ref|ZP_08074070.1| porin [Methylocystis sp. ATCC 49242]
gi|322395764|gb|EFX98305.1| porin [Methylocystis sp. ATCC 49242]
Length = 294
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 69/241 (28%), Gaps = 51/241 (21%)
Query: 53 IWSGNYVGLHISRLYETHPLADT---------------------INRKTYNSLLPNGLGI 91
+W+G YVGL+ + T + T N+ G
Sbjct: 43 MWTGFYVGLNAGGTFGASGGTSTESWGVLNGGSPIHGWAAGLSATSAPTSNNNSGFIGGG 102
Query: 92 ELGHNIQL-EDFVFGINCHTTAAKDDSTFYRL-------------------KEKYFIYGD 131
++G+N Q F+ G+ +S + + G
Sbjct: 103 QIGYNWQFMNSFLVGVEADIQGVAGNSGSQNIFGASSDPFTGTTFATFGTRSSRLDYLGT 162
Query: 132 VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSL---EKVESDNSKNAKGRFDGHGSSVVLGI 187
V + G+ L +YG GG V +S ++ S F G
Sbjct: 163 VRGRLGWLFTPTLLVYGTGGLAYGGVSTNSSFVTSELGIGLSSVGGTTFADTRVGWTAGG 222
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNS------NAKSDVERVDRKGNAHIASLGINMH 241
G ++M + S Y Y S + + + + HI G+N H
Sbjct: 223 GFEWMFMPNWSAKVEYLYYDLGTVSASGASIEPVVGDWGFSTTTRTRFDGHIVRAGLNYH 282
Query: 242 F 242
F
Sbjct: 283 F 283
>gi|27383307|ref|NP_774836.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27356481|dbj|BAC53461.1| bll8196 [Bradyrhizobium japonicum USDA 110]
Length = 278
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 67/255 (26%), Gaps = 47/255 (18%)
Query: 1 MNFNGYGALFFVVFL-SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYV 59
M N +L ++ +I + SLA DL W+G Y+
Sbjct: 1 MKCNKQLSLASIIAFGTIAFGSGSLAADLPA--------APVVKAPAPVYPLFSWTGGYI 52
Query: 60 GLHISRLYETHPLADTINRKTYNS------------------------LLPNGLGIELGH 95
G + + T + + L G++ G+
Sbjct: 53 GGSVGSGWGTSQTDLAVGNTFIGAPVNQTVNQLIGGTADLNVPLPQVQLNGFLGGVQAGY 112
Query: 96 NIQLEDFVFGINCHTTAAKDDSTFY-----RLKEKYFIYGDVVLKAGYSV-DSLLIYGMG 149
N Q V+G+ + D+ + G +V D L+Y G
Sbjct: 113 NFQSGVMVYGVESDFLWSGIKGRTGCFVVLNCTNDTKWIADITGRVGVTVGDRGLVYIKG 172
Query: 150 GFGG--------AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
G +S + A GR + LG G++Y S
Sbjct: 173 GAAWADSSIGINQSFAVTSNLGAGFAANGAADGRATKNIFGGTLGAGIEYAFLPGWSAKV 232
Query: 202 SYRYIPHHIHSVNNS 216
Y Y V
Sbjct: 233 EYDYFDFGRQDVKLP 247
>gi|319408966|emb|CBI82625.1| Hemin binding protein E [Bartonella schoenbuchensis R1]
Length = 303
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 40/136 (29%), Gaps = 9/136 (6%)
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID--SSLEKVES 166
A+ ++ G ++ G++ D ++ Y GG + S
Sbjct: 175 DIEEAEKTIITFKYTLNQKWTGATRIRIGFAADRIMPYIAGGVAYGQFQNILSLSSTATH 234
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D N G G+D+ + DI L A YRY + +
Sbjct: 235 DKELNNMSDETKTMIGYTFGAGIDFAMTDDIILRAEYRYSDFGKKKF-------AKDSFE 287
Query: 227 RKGNAHIASLGINMHF 242
+ G++ F
Sbjct: 288 LHYKTNDFRAGVSYKF 303
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 28/124 (22%), Gaps = 24/124 (19%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L ++ + A D + N W+G Y+G +
Sbjct: 4 KCLIATSIFTLAAISLVQAADSI----VFKENYKMGVSPIVRPPTFSWNGFYIGGQVGGF 59
Query: 67 YETHPL-------------------ADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGI 106
+N K L G G N+ L + + I
Sbjct: 60 SSKISAMSHDNDIPLLPDKSGRPKKWVPVNEKFLPKLSGFIGGFYAGSNVDLSNGLILSI 119
Query: 107 NCHT 110
+
Sbjct: 120 DTDI 123
>gi|240850342|ref|YP_002971735.1| hemin binding protein E [Bartonella grahamii as4aup]
gi|240267465|gb|ACS51053.1| hemin binding protein E [Bartonella grahamii as4aup]
Length = 330
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 40/131 (30%), Gaps = 8/131 (6%)
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A DS + K G ++ G+S ++ Y GG D + N
Sbjct: 208 AEDKDSLTFNHTLKQKWTGATRVRVGFSAGRVMPYIAGGVAYGQFQDILSTVITGGEPFN 267
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
LG G+D+ + + + A YRY + ++ K
Sbjct: 268 RTSDATKTMIGYTLGGGVDFAMTDHLVVRAEYRYSDFGKKKFK--------DEIEVKYKT 319
Query: 232 HIASLGINMHF 242
+ GI F
Sbjct: 320 NDFRAGIAYKF 330
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 34/142 (23%), Gaps = 25/142 (17%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
S++ P+ A D+ E W+G Y G +
Sbjct: 5 FITASVFSLISPSIVQAADVVAHE-----EPVHVASEVVASSPFSWAGIYFGGQVGGFSS 59
Query: 69 THPLAD-------------------TINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINC 108
+ ++ L G G N L +F+ GI+
Sbjct: 60 KTSAITRDVNIPLYPDEESKSKPWIPVEKQYMPELSGFMGGFYAGVNFDLGNNFIVGIDT 119
Query: 109 HTTAAKDDSTFYRLKEKYFIYG 130
+ T R + G
Sbjct: 120 DILLTEKKDTKTRFQADESSAG 141
>gi|146427736|emb|CAM89993.2| 25 kDa outer membrane protein [Brucella neotomae]
gi|146427746|emb|CAM89984.2| 25 kDa outer membrane protein [Brucella neotomae]
gi|146427756|emb|CAM89975.2| 25 kDa outer membrane protein [Brucella neotomae]
Length = 163
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 56/185 (30%), Gaps = 22/185 (11%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L V + + A D + + W+G Y GL++ +
Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYGWN 53
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ + K + G G N Q + V+G+ + + L+ K
Sbjct: 54 KAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGF 109
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + + GY ++ ++ Y G G+ + + N G G
Sbjct: 110 EGSLRARVGYDLNLVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAG 158
Query: 189 LDYMV 193
L+ +
Sbjct: 159 LEAKL 163
>gi|146427766|emb|CAM89966.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427776|emb|CAM89957.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427786|emb|CAM89948.2| 25 kDa outer membrane protein [Brucella canis]
Length = 163
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 55/185 (29%), Gaps = 22/185 (11%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L V + + A D + + W+G Y GL++ +
Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQP-------PVPAPVEVAPQYSWAGGYTGLYLGYGWN 53
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ + K + G G N Q + V+G+ + + + K
Sbjct: 54 KAKTSTVGSIKPDD----WKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGPEVKQGF 109
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + + GY ++ ++ Y G G+ + + N G G
Sbjct: 110 EGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAG 158
Query: 189 LDYMV 193
L+ +
Sbjct: 159 LEAKL 163
>gi|209886119|ref|YP_002289976.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
gi|209874315|gb|ACI94111.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
Length = 237
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 82/251 (32%), Gaps = 35/251 (13%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L I + S A DL W+G Y+G +
Sbjct: 4 LLLASVAVIALGTSSYAADLAA--------RPYTKAPATAVALYNWTGFYIGGFGGYGWG 55
Query: 69 THPLADTINR--------KTYNSLLPNGLGIELGHNIQL--EDFVFGINCHTTAAKDD-- 116
AD + + + G +G+N Q FVFG+ + D
Sbjct: 56 GKARADNTDFDDDGIDDTAAFPKMKGGFGGGTIGYNWQGFGSPFVFGLEAEIAGSGIDLS 115
Query: 117 ----STFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ K ++G V + GY+V D LLIY GG+ A S ++ +S
Sbjct: 116 FVDPADGSGASYKLNMFGSVTGRVGYAVNDMLLIYAKGGYAWARTKLSVVDGADS----- 170
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
S +G GL+YM+ + S A Y Y + + D + +
Sbjct: 171 --FSSSATHSGYTIGAGLEYMMARNWSTKAEYLYADYGKATY---GPAPDGDTGRIGLSN 225
Query: 232 HIASLGINMHF 242
H GIN HF
Sbjct: 226 HTVKFGINYHF 236
>gi|254719331|ref|ZP_05181142.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13]
gi|265984332|ref|ZP_06097067.1| outer membrane protein 22 [Brucella sp. 83/13]
gi|306839106|ref|ZP_07471923.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
gi|264662924|gb|EEZ33185.1| outer membrane protein 22 [Brucella sp. 83/13]
gi|306405653|gb|EFM61915.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
Length = 212
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 40/233 (17%), Positives = 73/233 (31%), Gaps = 26/233 (11%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
+ + + A + + + N+ WSGNYVG +
Sbjct: 5 SITAAAFGTAVMAFAGSAFAADMMGGTDYTYNDPVAAGP--HDWSGNYVGAQVGGSSSKF 62
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIY 129
+ S GI +G N+Q + VFG A+ + + +
Sbjct: 63 -------PSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWN 115
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G+ K GY+ D L+YG G+G G V++G G+
Sbjct: 116 GNAKGKVGYAFDKTLVYGTAGYGVTRFKAKENTTSAP-----------GWEGGVLIGAGV 164
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ +S+ A Y + + + + H G+N F
Sbjct: 165 EQALSGPLSVKAEYDFQRFNDVKSQVNGIEQ-----RNNLKNHSIKAGLNYRF 212
>gi|237815697|ref|ZP_04594694.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237788995|gb|EEP63206.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 222
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 73/220 (33%), Gaps = 26/220 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
A + + + N+ WSGNYVG + + S
Sbjct: 28 FAGSAFAADMMGGTDYTYNDPVAAGP--HDWSGNYVGAQVGGSSSKF-------PSPFAS 78
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIYGDVVLKAGYSVDS 142
GI +G N+Q + VFG A+ + + + G+ K GY+ D
Sbjct: 79 RTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTFDK 138
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+YG G+G +K+ G V++G G++ ++ +S+ A
Sbjct: 139 TLVYGTAGYGVTRFK-----------AKDNTTSASGWEGGVLIGAGVEQALSGPLSVKAE 187
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + + H G+N F
Sbjct: 188 YDFQRFNDVKSQVNGIEQ-----RNNLKNHSIKAGLNYKF 222
>gi|148252997|ref|YP_001237582.1| hypothetical protein BBta_1454 [Bradyrhizobium sp. BTAi1]
gi|146405170|gb|ABQ33676.1| hypothetical protein BBta_1454 [Bradyrhizobium sp. BTAi1]
Length = 665
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 66/237 (27%), Gaps = 41/237 (17%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISR-----LYETHPLADTINRKTYNSLLPNGL-------- 89
W+G Y+G H + PL + + LP
Sbjct: 3 AQSPYTSTVYDWTGWYIGAHAGALRGSSSWTATPLGPGGPPVSGSFGLPLNFDFMAGTGT 62
Query: 90 ---GIELGHNIQLEDFV-FGINCHTTAAKDD---------------STFYRLKEKYFI-- 128
G++ G+N L V GI + D ++ +
Sbjct: 63 YVLGLQGGYNYVLPSRVMLGIEGDVSVPNSDVVVPYSVRGGQTVISPAIGQVTYSEAVIH 122
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG----HGSSVV 184
YG V + GY+ D L+YG GGF Y + + V
Sbjct: 123 YGSVRGRVGYAFDHFLLYGTGGFAWTYDQLTRSQDASPVTGSFVPAGTLETKLLWRLGWV 182
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
GIG++ + + S A + + + ++ +G+N
Sbjct: 183 AGIGVEIPITGNWSAKAEFLETGFGRRGAFFA---ASIDAFRSDFATQSVRVGLNYK 236
>gi|323137744|ref|ZP_08072820.1| porin [Methylocystis sp. ATCC 49242]
gi|322397041|gb|EFX99566.1| porin [Methylocystis sp. ATCC 49242]
Length = 506
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 65/220 (29%), Gaps = 32/220 (14%)
Query: 53 IWSGNYVGLHISRLYETHPLADTI---------NRKTYNSLLPNGLGIELGHNIQLED-F 102
+W+ Y+G + T N G + G+ + F
Sbjct: 37 LWTSFYIGFNRGFGGGVLDSDVGFVSAVPGLSTATTTTNRASGFIAGGQFGYTYSFANHF 96
Query: 103 VFGINCHTTAAKDDS--------------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
V G+ + S T + +G +AGYSV LL Y
Sbjct: 97 VLGLESDFQWSDMRSSHQATTFATNPALITNADIHSGIDWFGSTRARAGYSVGRLLPYVT 156
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
GG V S ++ + S G +G G+++ +N ++S A Y Y+
Sbjct: 157 GGVAYGQVQSSGVQFLGSG--LATTGSRTNTRVGWAMGGGIEFALNSNLSAKAEYLYLYL 214
Query: 209 HIHSVNNSN------AKSDVERVDRKGNAHIASLGINMHF 242
+ + HI G+N F
Sbjct: 215 PGVGGGATGVGAPPVTPMAGSFRTNSVDVHIVRSGLNYKF 254
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 57/185 (30%), Gaps = 28/185 (15%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTI----------NRKTYNSLLPNGLGIELGHNIQLE- 100
W+G YVG++ + T N G + G+N QL
Sbjct: 278 YDWTGFYVGINGGYGGGVVTGSTTFVQPGAPGLAETTTASNRTAGYVGGAQGGYNYQLTK 337
Query: 101 DFVFGINCHTTAAKDDS-------------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
+ V G+ + + + +G L+AGY+ + L Y
Sbjct: 338 NIVVGVETDAQWSDVKAQHQAATIGGPLGFVYTNTPNDVSWFGTTRLRAGYASGNALSYV 397
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GG V + G + + LG G Y + ++S+ A Y Y+
Sbjct: 398 TGGVAYGEVN----AHGSQISGGVFGGSASQNKAGWALGGGAMYALTKNLSMRAEYLYVS 453
Query: 208 HHIHS 212
S
Sbjct: 454 FSGVS 458
>gi|114706584|ref|ZP_01439485.1| outer membrane protein, 31 kDa [Fulvimarina pelagi HTCC2506]
gi|114537976|gb|EAU41099.1| outer membrane protein, 31 kDa [Fulvimarina pelagi HTCC2506]
Length = 243
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 80/249 (32%), Gaps = 24/249 (9%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L L++ + + A DLY + D W+G YVG+
Sbjct: 4 LLLGFLLTMSSLSAASAADLYDDPSASYSDTG-----AYDQTPSDWTGGYVGVTGGLAAG 58
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS----------- 117
+ + + G++ G+++QL V G + D+
Sbjct: 59 ESEYSVSDGTGFETTAGGGLGGVQAGYDVQLGRAVLGGVADISLTGIDADVSTRERAGGV 118
Query: 118 -TFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN--AK 173
T + G V +AGY+ D +L YG GG + E N +
Sbjct: 119 ETTNSANTELDYLGTVRARAGYAASDRVLAYGHGGLAYGRTDTTISESERRGGVTNTQTE 178
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
R +G GL+Y ++SL Y Y + + RVD+ H
Sbjct: 179 SRKSDTKYGYAVGAGLEYKATDNVSLQTEYGYHDLGKDRLYSD----SNGRVDQDLQFHA 234
Query: 234 ASLGINMHF 242
G+N F
Sbjct: 235 VKAGVNFRF 243
>gi|225627750|ref|ZP_03785787.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617755|gb|EEH14800.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 222
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 70/220 (31%), Gaps = 26/220 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
A + + + N+ WSGNYVG + + S
Sbjct: 28 FAGSAFAADMMGGTDYTYNDPVAAGP--HDWSGNYVGARVGGSSSKF-------PSPFAS 78
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIYGDVVLKAGYSVDS 142
GI +G N+Q + VFG A+ + + + G+ K GY+ D
Sbjct: 79 RTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDK 138
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+YG G+G G V++G G++ ++ +S+ A
Sbjct: 139 TLVYGTAGYGVTRFKAKDNTTSAP-----------GWEGGVLIGAGVEQALSGPLSVKAE 187
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + + H G+N F
Sbjct: 188 YDFQRFNDVKSQVNGIEQ-----RNNLKNHSIKAGLNYKF 222
>gi|15420172|gb|AAK97308.1|AF308166_1 Pap31 [Bartonella henselae phage 60457]
Length = 219
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 59/206 (28%), Gaps = 55/206 (26%)
Query: 54 WSGNYVGLHISRLYETHPLADT------INRKTYNSLLPNGLGIELGHNIQLED-FVFGI 106
W+G Y+G + + D ++ GI G N+ L + + G+
Sbjct: 14 WTGFYIGGQVGNFSSKVEITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGV 73
Query: 107 NCHTTAAKDDST------------------------------------------FYRLKE 124
A + L
Sbjct: 74 ETDAVWADREDAKTSSAKVIREDELVNFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLAL 133
Query: 125 KYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDG 178
K G ++ G+ + D ++ Y GG A V S KV +++ +
Sbjct: 134 KEKWSGATRVRIGFTAADRIMPYVAGGVSYAQVQAVSSTKVTKAADDAEIASAQLFDKTK 193
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYR 204
LG G+D+ + ++ L A YR
Sbjct: 194 TLVGFTLGGGVDFAMTDNVLLRAEYR 219
>gi|323137959|ref|ZP_08073033.1| hypothetical protein Met49242DRAFT_2421 [Methylocystis sp. ATCC
49242]
gi|322396678|gb|EFX99205.1| hypothetical protein Met49242DRAFT_2421 [Methylocystis sp. ATCC
49242]
Length = 837
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/233 (17%), Positives = 73/233 (31%), Gaps = 44/233 (18%)
Query: 54 WSGNYVGLHISRLYET----------------HPLADTINRKT-YNSLLPNGLGIELGHN 96
W+ YVGL+ + + P+A + N L G++LG N
Sbjct: 593 WTDVYVGLNGGGAWSSPTSNVQVVGVGPAPASLPVAFSAAPTDTGNHLAGFIGGLQLGAN 652
Query: 97 IQL-EDFVFGINCHT-----------------TAAKDDSTFYRLKEKYFIYGDVVLKAGY 138
+F+ G+ T+ + G V + GY
Sbjct: 653 WNFSGNFLAGVETDLHGVSGNTDTKWQLTSANGGGDTFLTYEQRTATLNYLGTVRGRLGY 712
Query: 139 -SVDSLLIYGMGGFGGAYVIDSSLEK---VESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ +LL+YG GG V+ ++ V + F G G+++M
Sbjct: 713 LATPTLLVYGTGGMAYGGVVSNTAIFTRRVGGTSQTQVNPVFQDTLVGWSAGGGVEWMFL 772
Query: 195 YDISLSASYRYIPHHIHSVN-----NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S Y + + +S A + + N + G+N HF
Sbjct: 773 PNWSAKVDYLHYDLGNARASGFAAPSSGAFNYNASTSTRFNGDLVQAGVNRHF 825
>gi|254714341|ref|ZP_05176152.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1]
gi|261322117|ref|ZP_05961314.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261294807|gb|EEX98303.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 222
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 70/220 (31%), Gaps = 26/220 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
A + + + N+ WSGNYVG + + S
Sbjct: 28 FAGSAFAADMMGGTDYTYNDPVAAGP--HDWSGNYVGARVGGSSSKF-------PSPFAS 78
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIYGDVVLKAGYSVDS 142
GI +G N+Q + VFG A+ + + + G+ K GY+ D
Sbjct: 79 RTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDK 138
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+YG G+G G V++G G++ ++ +S+ A
Sbjct: 139 TLVYGTAGYGVTRFKAKDNTTSAP-----------GWEGGVLIGAGVEQALSGPLSVKAE 187
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + + H G+N F
Sbjct: 188 YDFQRFNDVKSQVNGIEQ-----RNNLKNHSIKAGLNYKF 222
>gi|144898146|emb|CAM75010.1| outer membrane protein Omp31 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 256
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 70/232 (30%), Gaps = 36/232 (15%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN----------------GL 89
Q WSG Y+G + T+ + Y + +
Sbjct: 23 AQSAPTVDWSGFYIGGLVGATNSQTQAKTTVGYQKYLNATDARQMAQAGDSDLSQWQPSV 82
Query: 90 GIELGHNIQLEDFVFGINCHTT-------------AAKDDSTFYRLK--EKYFIYGDVVL 134
G+ G+ Q + G+ ++ + L+ + +
Sbjct: 83 GLVGGYGKQFGHVLLGLEASANSIYLNDERTVSENYVSTPASRFILRQSVRADWMATLRP 142
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ G++ D+ L Y GG + +L V++ S +K + LG G +Y ++
Sbjct: 143 RLGWAEDNWLGYVTGGLSVTQLQLDTL-FVDNAFSGYSKSSDTKIRTGWSLGFGGEYALS 201
Query: 195 YDISLSASYRYIPHHI----HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+L Y Y ++N + + H +G+ F
Sbjct: 202 GGWALRGEYLYTNFGALKSMSETTSTNDSGGSLAHKAELDTHAVMVGLTYRF 253
>gi|148559641|ref|YP_001259198.1| hypothetical protein BOV_1247 [Brucella ovis ATCC 25840]
gi|46251263|gb|AAS84602.1| Omp22 [Brucella ovis]
gi|148370898|gb|ABQ60877.1| putative membrane protein [Brucella ovis ATCC 25840]
Length = 212
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 70/220 (31%), Gaps = 26/220 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
A + + + N+ WSGNYVG + + S
Sbjct: 18 FAGSAFAADMMGRTDYTYNDPVAAGP--HDWSGNYVGTQVGGSSSKF-------PSPFAS 68
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIYGDVVLKAGYSVDS 142
GI +G N+Q + VFG A+ + + + G+ K GY+ D
Sbjct: 69 RTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDK 128
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+YG G+G G V++G G++ ++ +S+ A
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAP-----------GWEGGVLIGAGVEQALSGPLSVKAE 177
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + + H G+N F
Sbjct: 178 YDFQRFNDVKSQVNGIEQ-----RNNLKNHSIKAGLNYKF 212
>gi|90419518|ref|ZP_01227428.1| possible outer membrane protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336455|gb|EAS50196.1| possible outer membrane protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 273
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 74/274 (27%), Gaps = 46/274 (16%)
Query: 9 LFFVVFLSIVVP--NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L ++ S + +++ A D+ + W+G Y+G+
Sbjct: 5 LLSILTASTALTFASYAQAADVIYEEPMAPAPME------ISPVASGWTGIYLGVQGGGA 58
Query: 67 Y------------------ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC 108
+ + + N G +G++ Q++ VFG+
Sbjct: 59 FNPQDPDNVDLRTNGFAFGGSAVQTAFGSNFDSNVDSSFLGGAHIGYDYQMDSVVFGVLA 118
Query: 109 HTTAAKDD---------STFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVID 158
A +YR + G V + GY V L Y GG V
Sbjct: 119 DINAIDLTRSSNADSNAPAYYRTDRELNYLGTVRARVGYLVTPDALAYVTGGLAYGDVDY 178
Query: 159 SSLEKVESDNSKNAKG-RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S + D +G G++ ++S A Y Y N
Sbjct: 179 SFSTNSPAVTGATPAVVSEDEDSFGYTVGGGMEVKFTDNMSFGAEYLYTNLGGSGYTRLN 238
Query: 218 AKSDVER---------VDRKGNAHIASLGINMHF 242
VD + H + ++ F
Sbjct: 239 GGPAFSGGVGGSTDFVVDDDFDFHTVTAKVSYKF 272
>gi|91975493|ref|YP_568152.1| Outer membrane autotransporter barrel [Rhodopseudomonas palustris
BisB5]
gi|91681949|gb|ABE38251.1| Outer membrane autotransporter barrel [Rhodopseudomonas palustris
BisB5]
Length = 645
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 66/220 (30%), Gaps = 21/220 (9%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHP-LADTINRKTYNSLLPNGLGIELGHNI 97
W+G ++G L + +T G ++G++
Sbjct: 422 TKAAKAPVLVRSAYNWTGFFIGGSFGALNGRTDWTFQPVGTRTDPRFAGAIGGGQIGYDH 481
Query: 98 QLEDFVFGINCHTTAAKDDST-------FYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMG 149
Q +V G+ + A + F+ + G K GY+ D L Y G
Sbjct: 482 QFGKWVVGVEGNLFATNANGARPCPNGVFFTCENNVSWMGTATAKLGYAFWDRSLWYVRG 541
Query: 150 GFGGAYVIDSSLEKVESDNS-------KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
G + ++ + + +G G ++ ++ + ++ A
Sbjct: 542 GGAFGDLKVTTNCNTGPVVPNPAFLVVAGCGESASRNRAGWTIGFGSEFALSKNWTVRAE 601
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y +D K N I+++G+N F
Sbjct: 602 TNYFDMGRERYTLPT-----STIDVKENGFISTVGLNYRF 636
>gi|296445959|ref|ZP_06887909.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296256477|gb|EFH03554.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 292
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/254 (13%), Positives = 73/254 (28%), Gaps = 49/254 (19%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKT----------------- 80
+ +W+G YVG++ +
Sbjct: 26 PSRGLPMAPPPPPPPLWNGFYVGINAGATFGGDATKTNAIPGFAVPGLGPNLATSAALAT 85
Query: 81 ---YNSLLPNGLGIELGHNIQLED-FVFGINCHT-------------------TAAKDDS 117
+ G ++G+N Q FV G+ +
Sbjct: 86 GSYPSDDARFLGGGQIGYNFQASPSFVLGLEADIQGVAGSRSTAKNSGLGIPAGFLGVVA 145
Query: 118 TFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ ++ G + + G+ + +LL+Y GG V + + + G F
Sbjct: 146 SDTTTTKRLDYLGTMRGRVGFLAAPTLLLYATGGLAYGEVGSTVTIGQANLPFAPSFGSF 205
Query: 177 ---DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV-----NNSNAKSDVERVDRK 228
G GL++++ S+ Y Y + + + + V +
Sbjct: 206 GGYSDLRVGWTAGGGLEWLLAPKWSVKLEYLYYDLGSVTYQGSALSFAGLYASTPVVKTR 265
Query: 229 GNAHIASLGINMHF 242
+ H+A +G+N HF
Sbjct: 266 FDGHVARMGLNYHF 279
>gi|119383169|ref|YP_914225.1| outer membrane protein [Paracoccus denitrificans PD1222]
gi|119372936|gb|ABL68529.1| outer membrane protein [Paracoccus denitrificans PD1222]
Length = 255
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 82/255 (32%), Gaps = 23/255 (9%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
A ++ + +LA + + + + G W+G Y GL +
Sbjct: 6 VKASLTAGAVASLALGTALAANAGGYTP-PVVDTDVTAPVVESAPVGDWAGAYAGLTLGY 64
Query: 66 LYE--------THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
+ + L G+ +G+ Q + +VFG A
Sbjct: 65 AFGGDDRVGFTEVDTGTYLGDAGKLELGGANAGLHVGYRWQRDRWVFGPELGFEAGNIKD 124
Query: 118 T---------FYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
T + K + LK GY++ LL+YG+ G A V S
Sbjct: 125 TITFDNQLGGSTDVSSKIRNVLALRLKTGYALRPDLLLYGIAGIARADVEYKVAGTDGSG 184
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
S + F + ++G+G++ ++ +S++ Y Y + +
Sbjct: 185 GSMSESRDFKSN--GYIVGLGVERKLSDRMSVTGEYEYANFGKTTRTFQVDGGVSTQA-- 240
Query: 228 KGNAHIASLGINMHF 242
+ H LG+N F
Sbjct: 241 TPDYHNVKLGLNFKF 255
>gi|23502160|ref|NP_698287.1| hypothetical protein BR1284 [Brucella suis 1330]
gi|163843547|ref|YP_001627951.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|254702018|ref|ZP_05163846.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str.
513]
gi|254704559|ref|ZP_05166387.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str.
686]
gi|256369703|ref|YP_003107213.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
gi|261752584|ref|ZP_05996293.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
gi|261755243|ref|ZP_05998952.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
gi|294852619|ref|ZP_06793292.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|23348124|gb|AAN30202.1| membrane protein, putative [Brucella suis 1330]
gi|157310303|emb|CAN43863.1| outer membrane protein 22 [Brucella microti CCM 4915]
gi|157310305|emb|CAN43864.1| outer membrane protein 22 [Brucella microti]
gi|163674270|gb|ABY38381.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|255999865|gb|ACU48264.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
gi|261742337|gb|EEY30263.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
gi|261744996|gb|EEY32922.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
gi|294821208|gb|EFG38207.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 212
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 70/220 (31%), Gaps = 26/220 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
A + + + N+ WSGNYVG + + S
Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--HDWSGNYVGAQVGGSSSKF-------PSPFAS 68
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIYGDVVLKAGYSVDS 142
GI +G N+Q + VFG A+ + + + G+ K GY+ D
Sbjct: 69 RTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDK 128
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+YG G+G G V++G G++ ++ +S+ A
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAP-----------GWEGGVLIGAGVEQALSGPLSVKAE 177
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + + H G+N F
Sbjct: 178 YDFQRFNDVKSQVNGIEQ-----RNNLKNHSIKAGLNYKF 212
>gi|296445833|ref|ZP_06887785.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296256661|gb|EFH03736.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 277
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 68/227 (29%), Gaps = 41/227 (18%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYN------------------SLLPNGLGIELG 94
+W+G YVGL+ + + T + S G ++G
Sbjct: 43 MWTGFYVGLNAGYGWTNNNTVTQSYADTGSAGFGAQALGGNFPWNASVSNDGFIGGGQIG 102
Query: 95 HNIQL-EDFVFGINCHTTAAKDD---------STFYRLKEKYFIYGDVVLKAGYSVDSLL 144
+N Q+ FV G+ D + + G V + GY V L
Sbjct: 103 YNAQVYNSFVVGLEADMQGVASDRQAASYYGPTASASISRSLDYLGTVRGRVGYLVTPTL 162
Query: 145 I-YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
+ Y GG S F +G G +++ S A Y
Sbjct: 163 LAYATGGLAYGQANLSGAYYGT----ATGSDSFSDTRVGYSVGGGFEWLFMPHWSAKAEY 218
Query: 204 RYIPHHIHS--------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + A++ + + + H+ G+N HF
Sbjct: 219 LYYDLGNATTPGASFAYTDGAGAQNSWAQSTARFDGHVVRAGVNYHF 265
>gi|319408577|emb|CBI82232.1| putative Hemin-binding protein B [Bartonella schoenbuchensis R1]
gi|319408616|emb|CBI82271.1| putative Hemin-binding protein B [Bartonella schoenbuchensis R1]
Length = 439
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 9/125 (7%)
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGRFD 177
Y K G ++ G++VD ++ Y GG A + + S + E ++
Sbjct: 322 YSNTLKQKWSGATRVRIGFAVDRIVPYIAGGVAYAQLQNIFSRSIETEGHEISSSSLSDK 381
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
LG G+D+ + ++ L A YRY ++++ + +G
Sbjct: 382 KIMVGYTLGGGVDFAMADNVILRAEYRYSDFGKQKF-------AKDKLELDYQTNDFRVG 434
Query: 238 INMHF 242
+ F
Sbjct: 435 VAYKF 439
Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 47/149 (31%), Gaps = 31/149 (20%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPR-----------------KIDLFNEADNNVEYQDD 49
L +++ + + A D+ +PR +++ +D
Sbjct: 4 KCLISTSIITLFTASVAQAADIMVPRESRPVVSPPQASKQISPPVEMSPNSDIPPVISAP 63
Query: 50 EYGIWSGNYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNI 97
+ W+G Y+G I ++ + + T L G+ G N+
Sbjct: 64 TF-SWNGFYLGGQIGGFSGKTGISLYAKKGPSTREWTPVEKDTVPQLSGFMGGLYAGANV 122
Query: 98 QLED-FVFGINCHTTAAKDDSTFYRLKEK 125
L + F+ G++ + T K K
Sbjct: 123 DLGNSFILGVDTDIVWSNKQDTKIVAKRK 151
>gi|150396648|ref|YP_001327115.1| porin [Sinorhizobium medicae WSM419]
gi|150028163|gb|ABR60280.1| porin [Sinorhizobium medicae WSM419]
Length = 215
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 80/242 (33%), Gaps = 33/242 (13%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+ +F + ++ + A DL P + + +W+G Y+GL
Sbjct: 2 IRNVLVAIFAAFMLGGKAHAADLAQP--------PEPTPTVETVHSFVWTGGYLGLQGGG 53
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST----FYR 121
+ L+ + LG G+N Q D+V G+ + +D T
Sbjct: 54 GWLNSDLSVPGGGGSK-RFSGGLLGAFAGYNYQHGDWVVGVEGDVSYNWNDETVTVFGTN 112
Query: 122 LKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ G V + GY+V D L+Y GG+ +
Sbjct: 113 TDVGTDVSGSVRARLGYTVNDRTLLYATGGWAVTRGFVDVAGAP----------KEKETF 162
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ +G G+DY + A YRY DV VD + H ++G+ +
Sbjct: 163 NGWTIGGGVDYGFTDSVFGRAEYRYNDFSDK---------DVGGVDVDLDQHQFTIGVGV 213
Query: 241 HF 242
F
Sbjct: 214 KF 215
>gi|62290190|ref|YP_221983.1| hypothetical protein BruAb1_1285 [Brucella abortus bv. 1 str.
9-941]
gi|82700111|ref|YP_414685.1| hypothetical protein BAB1_1302 [Brucella melitensis biovar Abortus
2308]
gi|189024424|ref|YP_001935192.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
gi|254689494|ref|ZP_05152748.1| hypothetical protein Babob68_04824 [Brucella abortus bv. 6 str.
870]
gi|254693981|ref|ZP_05155809.1| hypothetical protein Babob3T_04824 [Brucella abortus bv. 3 str.
Tulya]
gi|254697632|ref|ZP_05159460.1| hypothetical protein Babob28_07971 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730522|ref|ZP_05189100.1| hypothetical protein Babob42_04834 [Brucella abortus bv. 4 str.
292]
gi|256257742|ref|ZP_05463278.1| hypothetical protein Babob9C_10416 [Brucella abortus bv. 9 str.
C68]
gi|260546733|ref|ZP_05822472.1| outer membrane protein [Brucella abortus NCTC 8038]
gi|260755016|ref|ZP_05867364.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
gi|260758232|ref|ZP_05870580.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
gi|260762059|ref|ZP_05874402.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
gi|260884027|ref|ZP_05895641.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|261214272|ref|ZP_05928553.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
gi|297248580|ref|ZP_06932298.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
gi|14018349|emb|CAC38354.1| outer membrane protein [Brucella abortus]
gi|46251261|gb|AAS84601.1| Omp22 [Brucella abortus]
gi|62196322|gb|AAX74622.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941]
gi|82616212|emb|CAJ11258.1| membrane protein, putative [Brucella melitensis biovar Abortus
2308]
gi|189019996|gb|ACD72718.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
gi|260095783|gb|EEW79660.1| outer membrane protein [Brucella abortus NCTC 8038]
gi|260668550|gb|EEX55490.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
gi|260672491|gb|EEX59312.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675124|gb|EEX61945.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
gi|260873555|gb|EEX80624.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|260915879|gb|EEX82740.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
gi|297175749|gb|EFH35096.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
Length = 212
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 73/220 (33%), Gaps = 26/220 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
A + + + N+ WSGNYVG + + S
Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--HDWSGNYVGAQVGGSSSKF-------PSPFAS 68
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIYGDVVLKAGYSVDS 142
GI +G N+Q + VFG A+ + + + G+ K GY+ D
Sbjct: 69 RTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTFDK 128
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+YG G+G +K+ G V++G G++ ++ +S+ A
Sbjct: 129 TLVYGTAGYGVTRFK-----------AKDNTTSASGWEGGVLIGAGVEQALSGPLSVKAE 177
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + + H G+N F
Sbjct: 178 YDFQRFNDVKSQVNGIEQ-----RNNLKNHSIKAGLNYKF 212
>gi|161619235|ref|YP_001593122.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|260566198|ref|ZP_05836668.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
gi|46251265|gb|AAS84603.1| Omp22 [Brucella canis]
gi|161336046|gb|ABX62351.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|260155716|gb|EEW90796.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
Length = 212
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 70/219 (31%), Gaps = 26/219 (11%)
Query: 25 AVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL 84
A + + + N+ WSGNYVG + + S
Sbjct: 19 AGSAFAADMMGGTDYTYNDPVAAGP--HDWSGNYVGAQVGGSSSKF-------PSPFASR 69
Query: 85 LPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIYGDVVLKAGYSVDSL 143
GI +G N+Q + VFG A+ + + + G+ K GY+ D
Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKT 129
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
L+YG G+G G V++G G++ ++ +S+ A Y
Sbjct: 130 LVYGTAGYGVTRFKAKDNTTSAP-----------GWEGGVLIGAGVEQALSGPLSVKAEY 178
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + H G+N F
Sbjct: 179 DFQRFNDVKSQVNGIEQ-----RNNLKNHSIKAGLNYKF 212
>gi|254710345|ref|ZP_05172156.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
B2/94]
gi|256255239|ref|ZP_05460775.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94]
gi|260168973|ref|ZP_05755784.1| 22 kDa outer membrane protein precursor [Brucella sp. F5/99]
gi|261222435|ref|ZP_05936716.1| Omp22 [Brucella ceti B1/94]
gi|261317908|ref|ZP_05957105.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261758466|ref|ZP_06002175.1| outer membrane protein [Brucella sp. F5/99]
gi|46251269|gb|AAS84605.1| Omp22 [Brucella pinnipedialis]
gi|46251271|gb|AAS84606.1| Omp22 [Brucella ceti]
gi|46251273|gb|AAS84607.1| Omp22 [Brucella ceti]
gi|260921019|gb|EEX87672.1| Omp22 [Brucella ceti B1/94]
gi|261297131|gb|EEY00628.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261738450|gb|EEY26446.1| outer membrane protein [Brucella sp. F5/99]
Length = 212
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 70/220 (31%), Gaps = 26/220 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
A + + + N+ WSGNYVG + + S
Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--HDWSGNYVGARVGGSSSKF-------PSPFAS 68
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIYGDVVLKAGYSVDS 142
GI +G N+Q + VFG A+ + + + G+ K GY+ D
Sbjct: 69 RTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDK 128
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+YG G+G G V++G G++ ++ +S+ A
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAP-----------GWEGGVLIGAGVEQALSGPLSVKAE 177
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + + H G+N F
Sbjct: 178 YDFQRFNDVKSQVNGIEQ-----RNNLKNHSIKAGLNYKF 212
>gi|306840252|ref|ZP_07473026.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
gi|306289779|gb|EFM60961.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
Length = 212
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 64/191 (33%), Gaps = 24/191 (12%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSGNYVG + + S GI +G N+Q + VFG
Sbjct: 45 DWSGNYVGAQVGGSSSKF-------PSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNF 97
Query: 113 AKDDST-FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 98 AEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVTRFKAKDNTTSAP----- 152
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G V++G G++ ++ +S+ A Y + + + +
Sbjct: 153 ------GWEGGVLIGAGVEQALSGPLSVKAEYDFQRFNDVKSQVNGIEQ-----RNNLKN 201
Query: 232 HIASLGINMHF 242
H G+N F
Sbjct: 202 HSIKAGLNYKF 212
>gi|306844187|ref|ZP_07476780.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306275462|gb|EFM57199.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
Length = 212
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 64/191 (33%), Gaps = 24/191 (12%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSGNYVG + + S GI +G N+Q + VFG
Sbjct: 45 DWSGNYVGAQVGGSSSKF-------PSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNF 97
Query: 113 AKDDST-FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 98 AEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVTRFKAKDNTTSAP----- 152
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G V++G G++ ++ +S+ A Y + + + +
Sbjct: 153 ------GWEGGVLIGAGVEQALSGPLSVKAEYDFQRFNDVKSQVNGIEQ-----RNNLKN 201
Query: 232 HIASLGINMHF 242
H G+N F
Sbjct: 202 HSIKAGLNYKF 212
>gi|260460927|ref|ZP_05809177.1| porin [Mesorhizobium opportunistum WSM2075]
gi|259033504|gb|EEW34765.1| porin [Mesorhizobium opportunistum WSM2075]
Length = 255
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 63/227 (27%), Gaps = 33/227 (14%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKT--------------YNSLLPNGL 89
V WSG YVG HI D +
Sbjct: 30 VAPVAGSAYDWSGFYVGGHIGVADGDITATDMTEPNGGFFTELVPAGTEGFDFNKAGVAG 89
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDST--------FYRLKEKYFIYGDVVLKAGYSVD 141
GI G Q FV G TA T K Y +V + GY+ D
Sbjct: 90 GIHAGAQWQWGQFVLGGEATWTATGIRKTITSPYYPDSDTETGKISNYATIVGRVGYAFD 149
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+LIY G+ G V DN + + LG G+DY + ++SL
Sbjct: 150 RVLIYAKAGYAGGKVD-----FRARDNDALVSYEKNEWQNGYALGAGIDYALTNNLSLGV 204
Query: 202 SYRYIPHHIHSVNNSNAKSDV------ERVDRKGNAHIASLGINMHF 242
Y +I + N D E + + F
Sbjct: 205 DYTHIDLGHKTSTGDNVYDDGHLGDNPETYRTEAKVDAVMARLTYKF 251
>gi|296444331|ref|ZP_06886296.1| porin [Methylosinus trichosporium OB3b]
gi|296257978|gb|EFH05040.1| porin [Methylosinus trichosporium OB3b]
Length = 277
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 73/248 (29%), Gaps = 50/248 (20%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLY------ETHPLADTINRKTYNSLLPNGLGI 91
+ W+G YVGL++ + + N S G+
Sbjct: 25 PSRKEAPVFVPPPVFSWTGPYVGLNLGGSWITRNNDWNNWGGWGWNNNNSGSNGGVSGGL 84
Query: 92 ELGHNIQLED-FVFGINCHTTAA------------------KDDSTFYRLKEKYFIYGDV 132
++G+N QL FV G+ + E+ +G V
Sbjct: 85 QIGYNYQLSPMFVVGLETDFQGTSIGGGNNNNNWWGYGGVGWSNWWNNNNNERVPWFGTV 144
Query: 133 VLKAGYSV--DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ G ++ LLIYG GGFG V +D G + G G++
Sbjct: 145 RGRLGVALLDSRLLIYGTGGFGYGEVNR-------NDLFSWWGGNNGQLRTGWTAGGGIE 197
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE----------------RVDRKGNAHIA 234
+ + S Y Y ++ NN+ A + +
Sbjct: 198 WAFLPNWSAKIEYLYTELDNNNNNNNGAWLLAALPGYNPAVVGLGAWAWNNRHRTQINTV 257
Query: 235 SLGINMHF 242
G+N HF
Sbjct: 258 RAGVNYHF 265
>gi|85374383|ref|YP_458445.1| outer membrane protein-like [Erythrobacter litoralis HTCC2594]
gi|84787466|gb|ABC63648.1| outer membrane protein-like [Erythrobacter litoralis HTCC2594]
Length = 223
Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 16/184 (8%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
+ D N S G +G+++ L V G + D+ F + F
Sbjct: 47 AGSSVDDDGNPNNDQSAEGVIYGAAVGYDVDLGPVVIGPEAEFAWSTADTDFDNGDFEGF 106
Query: 128 IYGDVVL--------KAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+G+V + G + D L Y GG+ A + S N K D
Sbjct: 107 GFGNVSADRDLYLGARVGAKIGDQALAYVKGGYTNAKLNIRS-------NDGTTKFDTDY 159
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+G GL+Y +N ++ ++A YRY + V+ D +R D + H S+G+
Sbjct: 160 DLDGYRVGGGLEYAINRNMFVNAEYRYSNYSRAEVDFDGTLPDSDRFDVDLDRHQVSVGL 219
Query: 239 NMHF 242
+ F
Sbjct: 220 GVRF 223
>gi|256061359|ref|ZP_05451503.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33]
gi|261325360|ref|ZP_05964557.1| Omp22 [Brucella neotomae 5K33]
gi|46251267|gb|AAS84604.1| Omp22 [Brucella neotomae]
gi|261301340|gb|EEY04837.1| Omp22 [Brucella neotomae 5K33]
Length = 212
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 64/191 (33%), Gaps = 24/191 (12%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSGNYVG + + S GI +G N+Q + VFG
Sbjct: 45 DWSGNYVGAQVGGSSSKF-------PSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNF 97
Query: 113 AKDDST-FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 98 AEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVTRFKAKDNTTSAP----- 152
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G V++G G++ ++ +S+ A Y + + + +
Sbjct: 153 ------GWEGGVLIGAGVEQALSGPLSVKAEYDFQRFNDVKSQVNGIEQ-----RNNLKN 201
Query: 232 HIASLGINMHF 242
H G+N F
Sbjct: 202 HSIKAGLNYKF 212
>gi|323139111|ref|ZP_08074169.1| hypothetical protein Met49242DRAFT_3557 [Methylocystis sp. ATCC
49242]
gi|322395675|gb|EFX98218.1| hypothetical protein Met49242DRAFT_3557 [Methylocystis sp. ATCC
49242]
Length = 837
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/233 (16%), Positives = 70/233 (30%), Gaps = 44/233 (18%)
Query: 54 WSGNYVGLHISRLYET------------HPLADTINRK-----TYNSLLPNGLGIELGHN 96
W+ YVGL+ + + P + + T N L G++LG N
Sbjct: 593 WTDVYVGLNGGGAWSSPASNVQVVGVGPAPASLPVAFSAAPIDTGNHLAGFIGGLQLGAN 652
Query: 97 IQL-EDFVFGINCHT-----------------TAAKDDSTFYRLKEKYFIYGDVVLKAGY 138
+F+ G+ T+ + G V + GY
Sbjct: 653 WNFSGNFLAGVETDLHGVSGNTDTKWQLTSANGGGDTFLTYEQRTATLNYLGTVRGRLGY 712
Query: 139 SVDSLLI-YGMGGFGGAYVIDSSLEK---VESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
L+ YG GG V+ ++ + + F G G+++M
Sbjct: 713 LATPTLVVYGTGGMAYGGVVSNTAIFTRRIGGTSQTQVNPVFQDTLVGWSAGGGVEWMFL 772
Query: 195 YDISLSASYRYIPHHIHSVN-----NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S Y + + +S A + + N + G+N HF
Sbjct: 773 PNWSAKVDYLHYDLGNARASGFAAPSSGAFNYNASTSTRFNGDLVQAGVNRHF 825
>gi|225852776|ref|YP_002733009.1| hypothetical protein BMEA_A1331 [Brucella melitensis ATCC 23457]
gi|256044924|ref|ZP_05447827.1| hypothetical membrane protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263738|ref|ZP_05466270.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|260565476|ref|ZP_05835960.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|265991350|ref|ZP_06103907.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|225641141|gb|ACO01055.1| hypothetical membrane protein [Brucella melitensis ATCC 23457]
gi|260151544|gb|EEW86638.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|263002134|gb|EEZ14709.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093797|gb|EEZ17802.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|326409306|gb|ADZ66371.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539015|gb|ADZ87230.1| hypothetical membrane protein [Brucella melitensis M5-90]
Length = 212
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 70/220 (31%), Gaps = 26/220 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
A + + + N+ WSGNYVG + + S
Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--HDWSGNYVGAQVGGSSSKF-------PSPFAS 68
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIYGDVVLKAGYSVDS 142
GI +G N+Q + VFG A+ + + + G+ K GY+ D
Sbjct: 69 RTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTFDK 128
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+YG G+G S V++G G++ ++ +S+ A
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSASGC-----------EGGVLIGAGVEQALSGPLSVKAE 177
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + + H G+N F
Sbjct: 178 YDFQRFNDVKSQVNGIEQ-----RNNLKNHSIKAGLNYKF 212
>gi|148254831|ref|YP_001239416.1| hypothetical protein BBta_3415 [Bradyrhizobium sp. BTAi1]
gi|146407004|gb|ABQ35510.1| putative outer membrane protein of unknown function [Bradyrhizobium
sp. BTAi1]
Length = 680
Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 73/252 (28%), Gaps = 36/252 (14%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR-----LYETHP 71
I + + L++ L +P D + Q W+G ++G H +
Sbjct: 7 IGLTSAVLSLALAIPGPTDAAPIRSAEADIQA-----WTGPFLGGHFGYVGGASSWSASN 61
Query: 72 LADTINRKT--------YNSLLPNGLGIELGHNIQLED-FVFGINCHTT----------A 112
T++ T + G++ G+N L V G+ +
Sbjct: 62 AVTTVSGSTGVFNSYDVFKGTGSYLFGLQAGYNWTLPSRLVLGVEADVSTPNTVAGERTV 121
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL----EKVESDN 168
+ +E G + GY+ D L+Y GGF +Y +
Sbjct: 122 TSASAGTASYRETVLAMGTARARLGYAFDHWLLYATGGFAWSYDRLERTQLAGLPLVGSA 181
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
V G+G + + + A + H + + E +
Sbjct: 182 VAGTVDTALTWRLGWVAGLGAELPIAPHWTAKAEFLASEFGSHRKALA---ASAESLSSN 238
Query: 229 GNAHIASLGINM 240
+ LG+N
Sbjct: 239 LSVQRLQLGLNY 250
>gi|218513075|ref|ZP_03509915.1| outer membrane protein [Rhizobium etli 8C-3]
Length = 134
Score = 98.7 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 54/149 (36%), Gaps = 16/149 (10%)
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
G+N Q V+G+ + DD + +K KY G V + GY ++ L+YG G
Sbjct: 2 GYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLAL 61
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ S + +G G++ V +I+ YRY +
Sbjct: 62 GNIKVS-----------DGTSDESKTAYGYTVGAGVEAFVTNNITTRLEYRYTDYQSKDY 110
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D R + + LGI + F
Sbjct: 111 D-----LDSGSFSRGYDENSVKLGIGVKF 134
>gi|170741349|ref|YP_001770004.1| porin [Methylobacterium sp. 4-46]
gi|168195623|gb|ACA17570.1| porin [Methylobacterium sp. 4-46]
Length = 255
Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 75/255 (29%), Gaps = 37/255 (14%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL----YET 69
L+++ + A DL W+G Y G +++ L +
Sbjct: 9 LLAVLAATGAQAADLPR---------RAAPPVVAPVPTFTWTGAYFGANVAGLVDGNFLL 59
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTF------- 119
LA + S G +G+N Q FV G+ + T
Sbjct: 60 RSLAPLPGAASRPSAGGFVAGGTVGYNYQFAPENGFVAGLEGDIGYSGVRHTGIIAAAGL 119
Query: 120 --YRLKEKYFIY-GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG-- 174
+ + Y + + GY+ +L+Y GG+ + + +
Sbjct: 120 GTANGRLQTDTYHATIRGRIGYAWGPVLVYATGGWAFTEFNAEGVAATQRFGLGAGRPFV 179
Query: 175 -------RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
R +G G+ Y + D SL A Y + + R
Sbjct: 180 GAFAGPVRRSIPLDGYTVGGGVAYKITPDWSLKAEYLFAELDRRVAFRAGGTP--VRARV 237
Query: 228 KGNAHIASLGINMHF 242
+AH+ +G + F
Sbjct: 238 GLDAHLMRIGADYRF 252
>gi|254717240|ref|ZP_05179051.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1]
gi|261219057|ref|ZP_05933338.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|260924146|gb|EEX90714.1| conserved hypothetical protein [Brucella ceti M13/05/1]
Length = 221
Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 26/219 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
A + + + N+ WSGNYVG + + S
Sbjct: 28 FAGSAFAADMMGGTDYTYNDPVAAGP--HDWSGNYVGARVGGSSSKF-------PSPFAS 78
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIYGDVVLKAGYSVDS 142
GI +G N+Q + VFG A+ + + + G+ K GY+ D
Sbjct: 79 RTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDK 138
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+YG G+G G V++G G++ ++ +S+ A
Sbjct: 139 TLVYGTAGYGVTRFKAKDNTTSAP-----------GWEGGVLIGAGVEQALSGPLSVKAE 187
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
Y + + + + H G+N
Sbjct: 188 YDFQRFNDVKSQVNGIEQ-----RNNLKNHSIKAGLNYK 221
>gi|188584272|ref|YP_001927717.1| porin [Methylobacterium populi BJ001]
gi|179347770|gb|ACB83182.1| porin [Methylobacterium populi BJ001]
Length = 274
Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 81/280 (28%), Gaps = 55/280 (19%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L + ++ + +LA DL + W+G Y+G++
Sbjct: 3 NSLILIGLTGALLSSTALAADL---------PRRAEPPVFTPIPVFAWTGAYLGINAGYA 53
Query: 67 YETHPLADTINRKTYNSL--------------LPNGLGIELGHNIQLED---FVFGINCH 109
Y T + +G + G+N QL FVFG+
Sbjct: 54 YTESDTLRTAGIGALQANVTNDLRRAAVGLPQDGFTVGGQGGYNFQLTPGTGFVFGLEVD 113
Query: 110 TTAAKD---------------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+ G V + GY+ D +L+YG GGF
Sbjct: 114 AQYMDLQRSRTETIFRPAFNPNVLTNVYAADLDFLGTVRGRIGYAFDRVLVYGTGGFAYG 173
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYR 204
V S ++ G G + G G++Y + + ++L Y
Sbjct: 174 TV--SQGVTFQTGAPVTYAGARSGVETGYAYGGGIEYALPTDSFLNVFRSEAVTLKGEYL 231
Query: 205 YIPHHIHSV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + V + IA G+N F
Sbjct: 232 RYDLGSRTLLVGTTGGPGVGYNVTFRTEGAIARAGLNFKF 271
>gi|323137911|ref|ZP_08072986.1| porin [Methylocystis sp. ATCC 49242]
gi|322396914|gb|EFX99440.1| porin [Methylocystis sp. ATCC 49242]
Length = 259
Score = 98.3 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 80/245 (32%), Gaps = 20/245 (8%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS--------- 64
F + VV + + + DL + W G ++G+
Sbjct: 3 FKATVVGALASVLMIGAASAADLPSRKAPPEYIPPPPVFSWEGWHIGVVGGYGGGSSSTS 62
Query: 65 -RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAK-----DDS 117
+++ + N T +G E G+ Q +FV G + A +S
Sbjct: 63 SWIWDFGAVPAVWNVNTSRGTSGYLVGYESGYTWQFSNNFVLGYESEFSYADVRSNNTNS 122
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
F + + +G L+ GY+ +L Y GG V S + +
Sbjct: 123 WFGGVSNRLEWFGAERLRFGYAFGRILPYVTGGLAYGRVKASGTDSIGGFLFPTNAST-- 180
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD-RKGNAHIASL 236
+ +G GL+Y S+ A Y Y S + D R + H+A +
Sbjct: 181 -WQAGWTVGAGLEYAFWDKFSIKAEYLYTSMKGPSGTGLAFPNGFRTFDGRGFDTHLARV 239
Query: 237 GINMH 241
G+N +
Sbjct: 240 GLNYN 244
>gi|319784137|ref|YP_004143613.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170025|gb|ADV13563.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 255
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/225 (20%), Positives = 66/225 (29%), Gaps = 35/225 (15%)
Query: 47 QDDEYGIWSGNYVGLHIS---------------RLYETHPLADTINRKTYNSLLPNGLGI 91
WSG YVG H+ + T + +N G GI
Sbjct: 33 VAGSAYDWSGLYVGGHLGVANGDITATDMTEPNGGFFTDLVPAGTEGFDFNKAGVAG-GI 91
Query: 92 ELGHNIQLEDFVFGINCHTTAAKDDST--------FYRLKEKYFIYGDVVLKAGYSVDSL 143
G Q F+ G TA T K Y VV + GY+ D +
Sbjct: 92 HAGAQWQWGQFILGGEATWTATGIRKTITSPYFPDSDTETAKISNYATVVGRVGYAFDRV 151
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
LIY G+ G V DN + + LG G+DY + ++SL Y
Sbjct: 152 LIYAKAGYAGGKVD-----FRARDNDALVTYEKNEWQNGYALGAGIDYALTNNLSLGVDY 206
Query: 204 RYIPHHIHSVNNSNAKSDV------ERVDRKGNAHIASLGINMHF 242
++ + N D E + + F
Sbjct: 207 THVDLGHKTSTGDNVFDDGTLGDNPETYRTEAKVDAVMARLTYKF 251
>gi|209885401|ref|YP_002289258.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
gi|209873597|gb|ACI93393.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
Length = 225
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 61/200 (30%), Gaps = 39/200 (19%)
Query: 82 NSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDSTFY----------RLKEKYFIYG 130
+ G ++G+N Q+ D+V G+ A + + +G
Sbjct: 26 GTHSGALGGFQIGYNYQVRPDWVIGLEGDFQLADIGGSGSTSHIVPGVATSASQTVRSFG 85
Query: 131 DVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS-------- 181
+ + G+ + ++LL+Y GGF A + S+ VE S + +G
Sbjct: 86 TIRARLGHVAAENLLVYATGGFAFAKINSSARFDVEPGTSGSGIFDINGVRYTSLCGGPN 145
Query: 182 --------------SVVLGIGLDYMVNYDISLSASYRYIPHHI-----HSVNNSNAKSDV 222
+G G +Y + SL Y Y
Sbjct: 146 PNVCYAGSSRGMAPGWTIGGGFEYALGPRWSLKGEYLYARFDRGLTEVAVTTMPGTLPIT 205
Query: 223 ERVDRKGNAHIASLGINMHF 242
V + +I G+N F
Sbjct: 206 YPVKFATDLNIVRAGLNYRF 225
>gi|220926460|ref|YP_002501762.1| porin [Methylobacterium nodulans ORS 2060]
gi|219951067|gb|ACL61459.1| porin [Methylobacterium nodulans ORS 2060]
Length = 246
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 66/208 (31%), Gaps = 25/208 (12%)
Query: 54 WSGNYVGLHISRLYETHPLA----DTINRKTYNSLLPNGLGIELGHNIQLED---FVFGI 106
W+G Y G++ + + + T G ++G+N Q FV G
Sbjct: 42 WTGFYAGVNAGYGFGSGSDSFTDPTYGTISTGGGRDGFVGGGQVGYNYQFTPGSGFVVGA 101
Query: 107 NCHTTAAKDD---------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ FY + +G V + GY+VD +L+YG GGF
Sbjct: 102 EADIQGTTFGRSRTGLVGSAPFYDVGPSLDWFGTVRGRIGYAVDRILVYGTGGFAYGGGS 161
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH---IHSVN 214
S + + G G++Y + +S Y+ ++
Sbjct: 162 LPSFAASYTGPLPGT------TRTGWAAGGGVEYAITDRLSARLEGLYVNLDRGHRDTIY 215
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
++ A + + G+N F
Sbjct: 216 DATAGAYYGVAPDSSAFGLVRAGLNYRF 243
>gi|307320995|ref|ZP_07600402.1| porin [Sinorhizobium meliloti AK83]
gi|306893369|gb|EFN24148.1| porin [Sinorhizobium meliloti AK83]
Length = 213
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 56/169 (33%), Gaps = 22/169 (13%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK--YFIYGDVVL 134
G G+N Q D+V G+ + +D T + + + G V
Sbjct: 64 GGSASEKFSGGLFGAFAGYNYQHGDWVVGVEGDVSYNWNDETVFGSDTEAGTDVSGSVRA 123
Query: 135 KAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ GY+V D LIY GG+ + + +G G+DY
Sbjct: 124 RLGYTVNDRTLIYATGGWAVTRGFVDVAGAP----------KEKETFNGWTIGGGVDYGF 173
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ A YRY DV V+ + H ++G+ + F
Sbjct: 174 TDSVFGRAEYRYNDFGDK---------DVGGVNVDLDQHQFTVGVGVKF 213
>gi|254563933|ref|YP_003071028.1| 31 kDa outer-membrane immunogenic protein [Methylobacterium
extorquens DM4]
gi|254271211|emb|CAX27223.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens DM4]
Length = 274
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 79/280 (28%), Gaps = 55/280 (19%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L I++ +LA DL + + W+G Y G +
Sbjct: 3 NSLILSGLAGILLSGTALAADL---------PRRAEALVFTPIPVFAWTGAYFGPNGGYA 53
Query: 67 YETHPLADTINRKTYNSL--------------LPNGLGIELGHNIQLED---FVFGINCH 109
Y T + G + G+N QL FVFG
Sbjct: 54 YTESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGTGFVFGFETD 113
Query: 110 TTAAKD---------------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+ G V + GY+ D +L+YG GGF
Sbjct: 114 AQYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAFDRVLVYGTGGFAYG 173
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD----------ISLSASYR 204
+ + G G + G G++Y + + +++ A Y
Sbjct: 174 TT--TLAAVFRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVKAEYL 231
Query: 205 YIPHHIHSV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V ++ ++ + +A +G+N F
Sbjct: 232 RYDLGSRTVLIRSTGGPGVGYNIESRTEGALARVGLNFGF 271
>gi|256113839|ref|ZP_05454632.1| hypothetical membrane protein [Brucella melitensis bv. 3 str.
Ether]
gi|265995187|ref|ZP_06107744.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
gi|262766300|gb|EEZ12089.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
Length = 212
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 64/191 (33%), Gaps = 24/191 (12%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSGNYVG + + S GI +G N+Q + VFG
Sbjct: 45 DWSGNYVGAQVGGSSSKF-------PSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNF 97
Query: 113 AKDDST-FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A+ + + + G+ K GY+ D L+YG G+G S
Sbjct: 98 AEAEHRIGHGGTLQQSWNGNAKGKVGYTFDKTLVYGTAGYGVTRFKAKDNTTSASGC--- 154
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
V++G G++ ++ +S+ A Y + + + +
Sbjct: 155 --------EGGVLIGAGVEQALSGPLSVKAEYDFQRFNDVKSQVNGIEQ-----RNNLKN 201
Query: 232 HIASLGINMHF 242
H G+N F
Sbjct: 202 HSIKAGLNYKF 212
>gi|323138252|ref|ZP_08073324.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
gi|322396504|gb|EFX99033.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
Length = 255
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/261 (18%), Positives = 85/261 (32%), Gaps = 43/261 (16%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
L V L+++ + A DL ++ ++ +W+G Y G++I
Sbjct: 2 KKTLLTAVSLAVLAAGSAFAADLPSRKEAPVY-------VPPPPPPPMWTGFYAGVNIGG 54
Query: 66 LYETHPLADTI-------NRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDS 117
++ T N G ++G+N Q+ F+ G+ S
Sbjct: 55 GWDAGNGNGNAWNLFGANGGVTNNMSGGVVGGGQVGYNYQITPMFLVGVETDFQGTSMGS 114
Query: 118 TFYRL-----------KEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVE 165
+G V +AG ++ L +YG GGF A V
Sbjct: 115 GMNNNNWLWGWNGRAQGTSLDWFGTVRGRAGVTITPTLLVYGTGGFAYAGVQ-------- 166
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN----SNAKSD 221
+N + + G G+++M + S A Y Y NN +NA
Sbjct: 167 ----RNGGFQTSATQTGWTAGGGVEWMFMPNWSAKAEYLYTDVSGGGTNNWWFQNNAGLG 222
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + G+N HF
Sbjct: 223 LNSTNNHTRWNTIRAGVNYHF 243
>gi|163849581|ref|YP_001637624.1| porin [Methylobacterium extorquens PA1]
gi|163661186|gb|ABY28553.1| porin [Methylobacterium extorquens PA1]
Length = 283
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/273 (18%), Positives = 78/273 (28%), Gaps = 53/273 (19%)
Query: 22 HSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKT- 80
+ A DL V Q + WSG Y G+ + T +
Sbjct: 9 SAAAFVSTAAVAADLPQREQTPVFAQIPAFT-WSGFYAGIAAGYAFSGRQTVRTTDFTPI 67
Query: 81 -------------YNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFY---- 120
+ + G+N Q FV GI DS+
Sbjct: 68 GQAVLAASGFGAVRSEQEGATVAGGFGYNYQFTPGTGFVAGIETDIQYTDLDSSRATSAS 127
Query: 121 --------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES--DNSK 170
++ G V + GY+ + +L+YG GGF V V S
Sbjct: 128 VGGTTFFLSGRQSLNFLGTVRGRLGYAFNRVLVYGTGGFAYGNVNYEINANVTSALGTIP 187
Query: 171 NAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSN--- 217
GRF+ + V G G++Y + + + A Y + SV NS
Sbjct: 188 FDAGRFNNVETGYVYGGGVEYAMPTESFLNFFSANAVIIKAEYLHYDLGSRSVFNSGVGP 247
Query: 218 --------AKSDVERVDRKGNAHIASLGINMHF 242
A + +I G+N F
Sbjct: 248 VFGPGGSLAVGLTSVSRFRTEGNIVRAGVNYKF 280
>gi|163853964|ref|YP_001642007.1| porin [Methylobacterium extorquens PA1]
gi|240141418|ref|YP_002965898.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|163665569|gb|ABY32936.1| porin [Methylobacterium extorquens PA1]
gi|240011395|gb|ACS42621.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
Length = 274
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 78/280 (27%), Gaps = 55/280 (19%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L I++ +LA DL + W+G Y G +
Sbjct: 3 NSLILSGLAGILLSGTALAADL---------PRRAEAPVFTPIPVFAWTGAYFGPNGGYA 53
Query: 67 YETHPLADTINRKTYNSL--------------LPNGLGIELGHNIQLED---FVFGINCH 109
Y T + G + G+N QL FVFG
Sbjct: 54 YTESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGTGFVFGFETD 113
Query: 110 TTAAKD---------------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+ G V + GY+ D +L+YG GGF
Sbjct: 114 AQYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAFDRVLVYGTGGFAYG 173
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD----------ISLSASYR 204
+ + G G + G G++Y + + +++ A Y
Sbjct: 174 TT--TLAAVFRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVKAEYL 231
Query: 205 YIPHHIHSV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V ++ ++ + +A +G+N F
Sbjct: 232 RYDLGSRTVLIRSTGGPGVGYNIESRTEGALARVGLNFGF 271
>gi|169825359|ref|YP_001691252.1| hypothetical protein M446_7000 [Methylobacterium sp. 4-46]
gi|168199281|gb|ACA21227.1| hypothetical protein M446_7000 [Methylobacterium sp. 4-46]
Length = 583
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 81/267 (30%), Gaps = 37/267 (13%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
GA + + + + + A DL L + W+G Y G+
Sbjct: 5 GAYYLLYLPIVGLGFAASAADL-----PQLTPPMMAFAPLVTPSFT-WTGPYAGVFFGYG 58
Query: 67 Y----ETHPLADT-----INRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAA- 113
T G E+G+N+Q V G
Sbjct: 59 SLDESGTGRCIGPRCVRLPALSPGARAADLSAGSEVGYNLQASPGSGLVIGAAVDYQTTR 118
Query: 114 ----------------KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
D + FY L ++ +G V KAGY+ D L +YG GG YV
Sbjct: 119 LRGYGESILVREVDENSDFAAFYHLGQRLDTFGAVRGKAGYAFDRLFVYGTGGLAYGYVR 178
Query: 158 DSSLEKVE-SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ D A+G G G G +Y ++ +S+ A Y +V+
Sbjct: 179 IDVGTALTVGDRQFAAQGLTSGFRLGYAAGGGAEYAISPHLSVKAEGLYYDLGQRTVSIQ 238
Query: 217 NAKS-DVERVDRKGNAHIASLGINMHF 242
A V + +A +N F
Sbjct: 239 AALPRSVYGGTIATHGFLARASLNYRF 265
>gi|323138506|ref|ZP_08073575.1| porin [Methylocystis sp. ATCC 49242]
gi|322396302|gb|EFX98834.1| porin [Methylocystis sp. ATCC 49242]
Length = 300
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/250 (18%), Positives = 72/250 (28%), Gaps = 61/250 (24%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSL---------------------LPNGLGIE 92
W+G YVGL+ + A+ + +N G +
Sbjct: 41 WTGFYVGLNAGGTWGQSNSANLSSFALFNDPLWFQGNAFASSAWGAVPTSNASGFIGGGQ 100
Query: 93 LGHNIQLE-DFVFGINCHTTAAKDDS-------------------TFYRLKEKYFIYGDV 132
+G+N Q F+ G+ S T + ++ G V
Sbjct: 101 IGYNWQFGGSFLTGVEADIQGIAASSGRSSVTGVAFNALTGAMAMTTTDVSKRLDYLGTV 160
Query: 133 VLKAGYSVDSLLI-YGMGGFGGAYVIDSSLEKVESDNSKNAKG----RFDGHGSSVVLGI 187
+ GY V L+ YG GG V ++ + + G F G
Sbjct: 161 RGRLGYLVTPTLLAYGTGGLAYGGVGLNASQFSFDTGAFFGAGIGNTTFSNTLVGWTAGG 220
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVN---------------NSNAKSDVERVDRKGNAH 232
G+++M S Y Y + N S + V + N H
Sbjct: 221 GVEWMFMPGWSAKGEYLYYDLGSTTNNLAPVAGLANVFNLPPGSIGYAYASNVSSRYNGH 280
Query: 233 IASLGINMHF 242
I G+N HF
Sbjct: 281 IVRAGVNYHF 290
>gi|254696546|ref|ZP_05158374.1| outer membrane protein, putative [Brucella abortus bv. 2 str.
86/8/59]
gi|254705298|ref|ZP_05167126.1| outer membrane protein, putative [Brucella suis bv. 3 str. 686]
gi|260760923|ref|ZP_05873266.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|261756008|ref|ZP_05999717.1| outer membrane protein [Brucella suis bv. 3 str. 686]
gi|260671355|gb|EEX58176.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|261745761|gb|EEY33687.1| outer membrane protein [Brucella suis bv. 3 str. 686]
Length = 158
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 23/170 (13%)
Query: 84 LLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFY----------RLKEKYFIYGDV 132
G+ G+N + F+ G++ + + + + G V
Sbjct: 1 PNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDFITSGNPVQTTGETQLRWSGAV 60
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
+AGY++D + Y GG + +S + + +G G+DY
Sbjct: 61 RARAGYAIDRFMPYIAGGVAFGGIKNSL-------RIGGEESSKSKTQTGWTVGAGIDYA 113
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ L YRY + + ++ + LG+ F
Sbjct: 114 ATDNVLLRLEYRYTDYGKKNFGLND-----LDTRGSFKTNDIRLGVAYKF 158
>gi|323139008|ref|ZP_08074068.1| porin [Methylocystis sp. ATCC 49242]
gi|322395762|gb|EFX98303.1| porin [Methylocystis sp. ATCC 49242]
Length = 300
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/291 (17%), Positives = 88/291 (30%), Gaps = 70/291 (24%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
VV ++++ ++A DL + +W+G YVGL+ +
Sbjct: 9 VVMTAVLMTASAVAADL----PSRKDDPLPAP------PPPMWTGFYVGLNAGGTWSNSN 58
Query: 72 LADTINRK--TYNSLLPNGLGIEL--------------------GHNIQL-EDFVFGINC 108
A+ + T L + LG G+N ++ FV GI
Sbjct: 59 SANVASAPFWTLPGLNGDVLGASAISASAYNPANAGGFIGGGQIGYNWRIAGSFVTGIEA 118
Query: 109 HTTAAKDDS---------------------TFYRLKEKYFIYGDVVLKAGY-SVDSLLIY 146
+ T + G V + GY + +LLIY
Sbjct: 119 DIQGIAGNGGAGSSANVAAIAGALVPSHVATVVGTSKSLDYLGTVRSRIGYLATPTLLIY 178
Query: 147 GMGGFGGAYVIDSSL-----EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
G GG V S+ +++ + G F G G+++M + S
Sbjct: 179 GTGGLAYGGVSSSATISQSASFIDTAVPWGSTGAFSDTRVGWTAGGGIEWMFMSNWSAKV 238
Query: 202 SYRYIPHHIHSVN----------NSNAKSDVERVDRKGNAHIASLGINMHF 242
Y Y + N + + + N +I G+N HF
Sbjct: 239 EYLYYDLGSVTYNSSPLVVTSTLFGAETASLPSTRVRFNGNIVRAGLNYHF 289
>gi|254706545|ref|ZP_05168373.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M163/99/10]
gi|256031839|ref|ZP_05445453.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M292/94/1]
gi|256160030|ref|ZP_05457728.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1]
gi|261314005|ref|ZP_05953202.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|265988937|ref|ZP_06101494.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
gi|265998403|ref|ZP_06110960.1| Omp22 [Brucella ceti M490/95/1]
gi|261303031|gb|EEY06528.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|262553010|gb|EEZ08861.1| Omp22 [Brucella ceti M490/95/1]
gi|264661134|gb|EEZ31395.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
Length = 211
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 26/219 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
A + + + N+ WSGNYVG + + S
Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--HDWSGNYVGARVGGSSSKF-------PSPFAS 68
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-FYRLKEKYFIYGDVVLKAGYSVDS 142
GI +G N+Q + VFG A+ + + + G+ K GY+ D
Sbjct: 69 RTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDK 128
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+YG G+G G V++G G++ ++ +S+ A
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAP-----------GWEGGVLIGAGVEQALSGPLSVKAE 177
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
Y + + + + H G+N
Sbjct: 178 YDFQRFNDVKSQVNGIEQ-----RNNLKNHSIKAGLNYK 211
>gi|254470997|ref|ZP_05084400.1| outer membrane protein [Pseudovibrio sp. JE062]
gi|211960139|gb|EEA95336.1| outer membrane protein [Pseudovibrio sp. JE062]
Length = 201
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 64/195 (32%), Gaps = 19/195 (9%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
G W G Y+GL + DT+ + +L +G G+N + V G+
Sbjct: 24 SVGKWDGFYLGLKGG--FGQLTGKDTLG--SKGTLDSGVVGAFGGYNHSFDRIVVGVEAD 79
Query: 110 TTAAKDDSTFYRL--KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
A S + + ++ GY L Y G G A
Sbjct: 80 LNATNYTSVSDSGVSRSRSKWNTSATVRLGYDAGMFLPYLSAGVGLAEYEVKRFAD---- 135
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ + +V+G GL+ M+ ++S Y+++ +
Sbjct: 136 -----GQKSENTHIGLVVGAGLEAMITENVSARLDYKHMEMSKEKYKFQGFNA----FHI 186
Query: 228 KGNAHIASLGINMHF 242
+G + +LG+ +F
Sbjct: 187 EGRQDLVTLGVAYNF 201
>gi|218532905|ref|YP_002423721.1| porin [Methylobacterium chloromethanicum CM4]
gi|218525208|gb|ACK85793.1| porin [Methylobacterium chloromethanicum CM4]
Length = 274
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 78/280 (27%), Gaps = 55/280 (19%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L I++ +LA DL + W+G Y G +
Sbjct: 3 NSLILSGLAGILLSGTALAADL---------PRRAEAPVFTPIPVFAWTGAYFGTNGGYA 53
Query: 67 YETHPLADTINRKTYNSL--------------LPNGLGIELGHNIQLED---FVFGINCH 109
Y T + G + G+N QL FVFG
Sbjct: 54 YTESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGAGFVFGFETD 113
Query: 110 TTAAKD---------------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+ G V + GY+ D +L+YG GGF
Sbjct: 114 AQYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAFDRVLVYGTGGFAYG 173
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD----------ISLSASYR 204
+ + G G + G G++Y + + +++ A Y
Sbjct: 174 TT--TLAAVFRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVKAEYL 231
Query: 205 YIPHHIHSV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V ++ ++ + +A +G+N F
Sbjct: 232 RYDLGSRTVLIRSTGGPGVGYNIESRTEGALARVGLNFGF 271
>gi|90424260|ref|YP_532630.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris BisB18]
gi|90106274|gb|ABD88311.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris BisB18]
Length = 251
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 65/210 (30%), Gaps = 22/210 (10%)
Query: 51 YGIWSGNYVGLHISRLYET------HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
WSG Y+G + + ++ + + G ++G+ Q + VF
Sbjct: 36 VYGWSGFYLGGNGGWGSSRKCWDFVNAAGSFLSSEGCHDATGGTAGGQVGYRWQAANMVF 95
Query: 105 GINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
G+ A + + + K +G + G + + L+Y G
Sbjct: 96 GVEAQGNWADFNGSNISVAFPTVVNATKVDSFGLFTGQIGNAWGNTLVYLKAGGAVTSDR 155
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ +A V+G+G++Y S+ Y ++ + +N
Sbjct: 156 YTGYLTSNGVQISDA---VKDTRWGAVVGLGVEYGFGGAWSVGVEYDHMFMQDKLIRFTN 212
Query: 218 ------AKSDVERVDRKGNAHIASLGINMH 241
A + + + +L +N
Sbjct: 213 IGTVAPAGTAYASDRIHQDVDLVTLRLNYR 242
>gi|17987000|ref|NP_539634.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
str. 16M]
gi|17982651|gb|AAL51898.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
str. 16M]
Length = 185
Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 64/191 (33%), Gaps = 24/191 (12%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSGNYVG + + S GI +G N+Q + VFG
Sbjct: 18 DWSGNYVGAQVGGSSSKF-------PSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNF 70
Query: 113 AKDDST-FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A+ + + + G+ K GY+ D L+YG G+G S
Sbjct: 71 AEAEHRIGHGGTLQQSWNGNAKGKVGYTFDKTLVYGTAGYGVTRFKAKDNTTSASGC--- 127
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
V++G G++ ++ +S+ A Y + + + +
Sbjct: 128 --------EGGVLIGAGVEQALSGPLSVKAEYDFQRFNDVKSQVNGIEQ-----RNNLKN 174
Query: 232 HIASLGINMHF 242
H G+N F
Sbjct: 175 HSIKAGLNYKF 185
>gi|296447975|ref|ZP_06889882.1| porin [Methylosinus trichosporium OB3b]
gi|296254542|gb|EFH01662.1| porin [Methylosinus trichosporium OB3b]
Length = 308
Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/270 (13%), Positives = 68/270 (25%), Gaps = 66/270 (24%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTIN-------------------R 78
+ W+G Y+G + ++ D+
Sbjct: 23 DLPSIAPPPPPPPVFSWTGAYLGANGGYIWGARNGVDSYGVAVIDKDPLFGATSALGVGN 82
Query: 79 KTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKE------------- 124
+L G + G+N Q+ FV G+ + R +
Sbjct: 83 VAAPNLNGAFGGGQAGYNYQVSPRFVIGVEGDVQGTAVQGSEGRYRLLTVPNLPRYSIGT 142
Query: 125 ------KYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVI------------DSSLEKVE 165
V + G++V L+Y GG V S+ +
Sbjct: 143 QTQVDRNIDYLATVRGRVGFAVLPDALLYLTGGLAFGRVSQRVTQTQSVYWAGSTNFPAD 202
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH------SVNNSNAK 219
SD A +F G G+++ + S Y Y + + + A
Sbjct: 203 SDGFGFAASQFAQTRVGWAAGGGVEWAFRGNWSAKLEYLYYDLGGVRSSGALAFDTNAAP 262
Query: 220 SDVER--------VDRKGNAHIASLGINMH 241
+ N H+ G+N
Sbjct: 263 GPGSGGVGLVAVESRSRFNGHVLRAGLNYR 292
>gi|148257935|ref|YP_001242520.1| hypothetical protein BBta_6718 [Bradyrhizobium sp. BTAi1]
gi|146410108|gb|ABQ38614.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 550
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 14/163 (8%)
Query: 89 LGIELGHNIQLEDFVFGINC--HTTAAKDDSTFYR---LKEKYFIYGDVVLKAGYSVDS- 142
G++LG + Q++ FV GI + L + ++AGY V
Sbjct: 385 GGVQLGCDYQIDRFVLGIQAMADLGIINASTAVAPQLTLNARTSNLYTATVRAGYLVTPE 444
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+L+Y GG +++ ++ A + S +G G+++M + S A
Sbjct: 445 VLLYARGGAAWTRTSVTAVNAANGQSASAAF-----NRSGWTVGAGVEWMFARNWSAFAE 499
Query: 203 YRYIPHHIHSVNNSNAKSDVER---VDRKGNAHIASLGINMHF 242
Y Y + A + V H A +G+N F
Sbjct: 500 YDYADFGTVTGRLPGAAAVTGGPDVVSLNTKIHTALVGVNYRF 542
>gi|146338464|ref|YP_001203512.1| hypothetical protein BRADO1381 [Bradyrhizobium sp. ORS278]
gi|146191270|emb|CAL75275.1| hypothetical protein BRADO1381 [Bradyrhizobium sp. ORS278]
Length = 549
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 14/163 (8%)
Query: 89 LGIELGHNIQLEDFVFGIN-----CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS- 142
G++LG + QL+ FV GI + + + L + ++AGY V
Sbjct: 384 GGLQLGCDYQLDRFVVGIQAMADLGNINVSGPLAPGLTLNTRTSNLYTATVRAGYLVTPE 443
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+L Y GG ++ A + S +G G+++M + S A
Sbjct: 444 ILAYVRGGAAWTRTTVGVANTATGQSASVAF-----NRSGWTVGAGVEWMFARNWSAFAE 498
Query: 203 YRYIPHHIHSVNNSNAKSDVER---VDRKGNAHIASLGINMHF 242
Y Y + A + V +K H A +G+N F
Sbjct: 499 YDYADFGTATGVLPGAAAITGGPNVVSQKTQLHTAMIGVNYRF 541
>gi|15965438|ref|NP_385791.1| outer-membrane protein [Sinorhizobium meliloti 1021]
gi|307310613|ref|ZP_07590260.1| porin [Sinorhizobium meliloti BL225C]
gi|15074619|emb|CAC46264.1| Probable outer-membrane protein [Sinorhizobium meliloti 1021]
gi|306899723|gb|EFN30349.1| porin [Sinorhizobium meliloti BL225C]
Length = 215
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 55/171 (32%), Gaps = 24/171 (14%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST----FYRLKEKYFIYGDV 132
G G+N Q D+V G+ + +D T + + G V
Sbjct: 64 GGSASEKFSGGLFGAFAGYNYQHGDWVVGVEGDVSYNWNDETVTVFGSDTEAGTDVSGSV 123
Query: 133 VLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ GY+V D LIY GG+ + + +G G+DY
Sbjct: 124 RARLGYTVNDRTLIYATGGWAVTRGFVDVAGAP----------KEKETFNGWTIGGGVDY 173
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ A YRY DV V+ + H ++G+ + F
Sbjct: 174 GFTDSVFGRAEYRYNDFGDK---------DVGGVNVDLDQHQFTVGVGVKF 215
>gi|146342734|ref|YP_001207782.1| hypothetical protein BRADO5904 [Bradyrhizobium sp. ORS278]
gi|146195540|emb|CAL79567.1| hypothetical protein with a putative signal peptide; putative
pertactin (N-terminal) and outer-membrane immunogenic
protein (C-terminal) [Bradyrhizobium sp. ORS278]
Length = 603
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 60/209 (28%), Gaps = 32/209 (15%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKD------- 115
S D T G ++G+N Q +VFG+ AA
Sbjct: 388 SAGRTDVRFGDPATNSTRPWTSGVFGGGQVGYNYQFAGSWVFGVEGDIGAANIHGARTVG 447
Query: 116 --------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
S ++ ++K + GY + L Y GG ++ +
Sbjct: 448 NQAFGAGLTSAYFVAEDKTNWVASATARLGYGLGRTLWYVKGGAAFEDGRTTATCYNPNG 507
Query: 168 --------------NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ +G G ++ + + S A Y Y+ +
Sbjct: 508 VAIGSVCNNAAGVVFASGTGFGISNTRVGWTIGYGTEFDLGRNWSAKAEYDYLSFGRYRA 567
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+S+ + + + + +G+N F
Sbjct: 568 LSSDGTTTLSA--KADSISQVKIGLNYRF 594
>gi|319407469|emb|CBI81119.1| Hemin binding protein d [Bartonella sp. 1-1C]
Length = 270
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/280 (12%), Positives = 78/280 (27%), Gaps = 60/280 (21%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE- 68
++ + + A D +P ++ + + W G Y G I
Sbjct: 4 LTASVFTLFSISIAQATDFVIP------YQSHTDSPFVLSSAFSWQGFYFGARIGGFSGP 57
Query: 69 ---------THPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST 118
++ L G+ G +I + + FV G + + + T
Sbjct: 58 ITSSIMDENNVERNIIFQDQSSPKLSGVVGGLYAGLDINIHNIFVVGCDTNVDWSGVKDT 117
Query: 119 ------------------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+ + + + G+S D ++ Y GG +
Sbjct: 118 KVIDVIASLQADLKYGNGGGEVDFGIKQSLQQKWLSAIRWRVGFSFDRVMPYVAGGVSLS 177
Query: 155 YVIDSSLEKVESDNSKNAKGRFDG------------HGSSVVLGIGLDYMVNYDISLSAS 202
+ + + + N+ ++ +G GLD+ + + L A
Sbjct: 178 QFRSTYSKFLVASNNNSSIRSLSEKPLPVSSTSNVNTMVGYTIGGGLDFAITDNFILRAE 237
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y Y + NS ++ ++ G+ F
Sbjct: 238 YNYSDFGRKELVNS-------KIKFSYKSNAFYFGLAYKF 270
>gi|134095715|ref|YP_001100790.1| hypothetical protein HEAR2547 [Herminiimonas arsenicoxydans]
gi|133739618|emb|CAL62669.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
Length = 278
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/219 (13%), Positives = 52/219 (23%), Gaps = 33/219 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y A ++ + +S +G LG+N G+
Sbjct: 60 GYFAGVGGDASGAIAQASSLTGRYASSHKGGAVGAHLGYNWPSGKIFLGLESDIQFTDLK 119
Query: 117 STFYRLK-------------------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ + GY D L+YG GG V
Sbjct: 120 DNAALNTINPVTGYPGNPMSANVRQVNTVDYLVTLRGRIGYVNDQWLLYGTGGVAVGRVN 179
Query: 158 DSSLEKVESDNSKNAKGRF-----DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ K ++ VLG G +Y + + ++ Y Y S
Sbjct: 180 TNINYKGSYLSAPTIVFDDLNAGSRSTRLGFVLGAGAEYAIAKNWAVRVEYLYYDLGKSS 239
Query: 213 VNNSNAK---------SDVERVDRKGNAHIASLGINMHF 242
+ + S +GI+ F
Sbjct: 240 QSYNVTSRAPATGFVASSSALATTDWTLSTLRVGISYRF 278
>gi|296446453|ref|ZP_06888397.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296256088|gb|EFH03171.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 210
Score = 95.6 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 60/209 (28%), Gaps = 41/209 (19%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
V WSG Y GL++ L G +LG+N +L
Sbjct: 26 PQATVFGGARPAYAWSGVYAGLNLGAGLSASGL----------DRSGILGGGQLGYNYRL 75
Query: 100 ED-FVFGINCHTTAAKDDSTFYRLKE---KYFIYGDVVLKAGYSV--DSLLIYGMGGFGG 153
FV G+ R ++ +G + G D LL +G GG+
Sbjct: 76 GPLFVVGLETDFQGTSLGGDSGRYGFPSPRFDWFGTARGRVGVLPFSDHLLFFGTGGYAY 135
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ D G GL++ D S+ A Y Y
Sbjct: 136 GH-------------------DGDRMHDGWTAGGGLEWAFARDWSVKAEYLYTDFG---- 172
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + R + H G+N HF
Sbjct: 173 --AGGQPRFPAPRRVDDFHFMRAGVNYHF 199
>gi|156739530|gb|ABU93425.1| Omp25 [Brucella suis]
gi|156739540|gb|ABU93430.1| Omp25 [Brucella abortus]
gi|156739558|gb|ABU93439.1| Omp25 [Brucella melitensis]
gi|156739590|gb|ABU93455.1| Omp25 [Brucella suis]
gi|156739594|gb|ABU93457.1| Omp25 [Brucella suis]
gi|156739614|gb|ABU93467.1| Omp25 [Brucella melitensis]
gi|156739630|gb|ABU93475.1| Omp25 [Brucella suis]
Length = 128
Score = 95.6 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 15/142 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y GL++ + + + K + G G N Q + V+G+ +
Sbjct: 1 GGYTGLYLGYGWNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWA 56
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ L+ K G + + GY ++ ++ Y G G+ + + N
Sbjct: 57 KKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDD 105
Query: 176 FDGHGSSVVLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 106 ESKFRVGWTAGAGLEAKLTDNI 127
>gi|49474039|ref|YP_032081.1| hemin binding protein d [Bartonella quintana str. Toulouse]
gi|21689907|gb|AAM68131.1| hemin-binding protein D [Bartonella quintana]
gi|49239543|emb|CAF25900.1| Hemin binding protein d [Bartonella quintana str. Toulouse]
Length = 294
Score = 95.6 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 9/123 (7%)
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG--RFDGH 179
K G ++ G+S + L+ Y GG + ++ + ++
Sbjct: 179 ATLKQKWSGATRVRVGFSGERLMPYIAGGVAYTQIQNTFVAPPNFVVIDFSRFLHDEKKT 238
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
LG G+D+ + ++ + A YRY +RV+ + +G+
Sbjct: 239 FVGYTLGGGVDFAMTDNVIMRAEYRYSDFGKKKF-------GQDRVEIGYKTNDFRVGVA 291
Query: 240 MHF 242
F
Sbjct: 292 YKF 294
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 35/129 (27%), Gaps = 23/129 (17%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
L S++ + + A D+ +P E+ V W+G Y+G I
Sbjct: 3 KKYLITTSIFSLISISVAQAADVIIPE----QPESVVAVPA-----FSWTGFYLGGQIGN 53
Query: 66 LYETHPLADTINRKT-------------YNSLLPNGLGIELGHNIQLED-FVFGINCHTT 111
L + + GI G N FV G++
Sbjct: 54 FSSKVDLNYLRDLRDQEVGKWASVKKELLPKPSGFVGGIYGGFNFDFGKGFVIGVDTDVI 113
Query: 112 AAKDDSTFY 120
+ +
Sbjct: 114 WSNKKESKN 122
>gi|27379810|ref|NP_771339.1| outer-membrane protein [Bradyrhizobium japonicum USDA 110]
gi|27352963|dbj|BAC49964.1| blr4699 [Bradyrhizobium japonicum USDA 110]
Length = 259
Score = 95.6 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 69/215 (32%), Gaps = 27/215 (12%)
Query: 50 EYGIWSGNYVGLHISRLYET------HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
WSG Y+G++ P+ + + ++ +G ++G+ Q ++V
Sbjct: 40 AIYDWSGFYIGINGGGGSAHKCWDFVTPVTGVLIGEGCHNATGGTVGGQVGYRWQSANWV 99
Query: 104 FGINCHTTAAKDDSTFYRL---------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
FG+ A + K +G + GY+ +++L Y GG
Sbjct: 100 FGLEGQGNWADFSGDNVSTTFIGTGLRDRSKINAFGLFTGQVGYAWNNVLFYVKGGGAVV 159
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ + R + +G GL++ + ++ Y +I ++
Sbjct: 160 SDRYRGYDVITGL----EFDRANETRWGGTVGAGLEFGFAPNWTVGVEYDHIFMGNRTIG 215
Query: 215 NSN--------AKSDVERVDRKGNAHIASLGINMH 241
+ A + + I + +N
Sbjct: 216 FAGSGNFVVAPAGAFTRSERIGQDVDIGLVRVNYR 250
>gi|148253089|ref|YP_001237674.1| OmpA-like transmembrane domain-containing protein [Bradyrhizobium
sp. BTAi1]
gi|146405262|gb|ABQ33768.1| OmpA-like transmembrane domain protein [Bradyrhizobium sp. BTAi1]
Length = 598
Score = 95.6 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 60/175 (34%), Gaps = 21/175 (12%)
Query: 78 RKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTT---AAKDDS-------TFYRLKEKY 126
+S+ G++LG+N +L V G+ + D R+ EK
Sbjct: 2 PPFKSSVGSLFGGLQLGYNRELPSRVVLGVETDLSFPNYLDFDDIIWSGVNANGRVTEKV 61
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
YG + + GY+ LIY G + + D A + G + V G
Sbjct: 62 DYYGSLRGRIGYAPARWLIYATAGLAYSQGR------LTEDPFDPATQKKIGFRAGWVAG 115
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
G++ V+ + + Y Y +V + S D H LG+N
Sbjct: 116 AGVEAPVDGNWTARIEYLYSNFGSLNVMLPSGTSYGSTFDL----HTVRLGLNRK 166
>gi|323139376|ref|ZP_08074427.1| porin [Methylocystis sp. ATCC 49242]
gi|322395369|gb|EFX97919.1| porin [Methylocystis sp. ATCC 49242]
Length = 293
Score = 95.6 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 73/264 (27%), Gaps = 59/264 (22%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL------------- 84
+ + +W+G Y+GL+ + + T ++++
Sbjct: 19 DLPSSKGPATLPPPPLWTGFYLGLNAGGAWSDNNSVQTATFPIFDAIPAGYGTTSAILGT 78
Query: 85 -------LPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKE------------ 124
G ++G++ Q FV G+ +
Sbjct: 79 FSAPANASGFIGGGQIGYDYQFGGAFVAGVEADIQGVASSDGSSSVAGAAFNPVVLGGST 138
Query: 125 ---------KYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSL-----EKVESDNS 169
G + GY V L ++G G V ++ V +
Sbjct: 139 ASQLATVGKSLDYLGTARGRLGYLVTPTLLVFGSSGLAYGGVSANTSIFQSYTPVAGATN 198
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN-----------SNA 218
A G + G + G GL++M + S A Y Y + + + A
Sbjct: 199 IFASGSYSGARAGWTAGGGLEWMFVPNWSAKAEYLYYDLGNVTYSVAPMVSTVIGVGALA 258
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S +I G+N HF
Sbjct: 259 FSGASHSSTSFRGNIVRAGVNYHF 282
>gi|296445629|ref|ZP_06887584.1| outer membrane protein Omp31 precursor [Methylosinus trichosporium
OB3b]
gi|296256874|gb|EFH03946.1| outer membrane protein Omp31 precursor [Methylosinus trichosporium
OB3b]
Length = 225
Score = 95.6 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 18/203 (8%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVF 104
Y W G YVG+H + R +G+ G+N +F+
Sbjct: 35 YSPPPAFTWRGFYVGVHGGYGFGAFQDN---GRSLLGEPNGWLVGVTGGYNYTFGPNFLI 91
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYG-----DVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
G+ + + G + +AG D L+Y GGF G
Sbjct: 92 GLEADFDFSGGKGGGSPIAGVVGSSGVDNIMTLRPRAGMIFDRALVYVTGGFAGV----- 146
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ G+ + S LG G++Y + ++S A Y +
Sbjct: 147 VASGTVGNVYNGFFGQQSQYLSGWALGAGIEYGLAPNLSAKAEYLFTSVGGERYFEFTPN 206
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ + + + G N HF
Sbjct: 207 ALTSTL----DTSLVRGGFNYHF 225
>gi|156739520|gb|ABU93420.1| Omp25 [Brucella canis]
gi|156739522|gb|ABU93421.1| Omp25 [Brucella canis]
Length = 128
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 15/142 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y GL++ + + + K + G G N Q + V+G+ +
Sbjct: 1 GGYTGLYLGYGWNKAKTSTVGSIKPDD----WKAGAFAGWNFQKDQIVYGVEGDAGYSWA 56
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ L+ K G + + GY ++ ++ Y G G+ + + N
Sbjct: 57 KKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDD 105
Query: 176 FDGHGSSVVLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 106 ESKFRVGWTAGAGLEAKLTDNI 127
>gi|90408691|ref|ZP_01216841.1| putative outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90310205|gb|EAS38340.1| putative outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 415
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 46/247 (18%), Positives = 73/247 (29%), Gaps = 45/247 (18%)
Query: 2 NFNGYG--ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYV 59
N N AL V + VP ++ + D + NN YV
Sbjct: 40 NLNKIKKQALCSAVLFFLAVPAYAQVDNAVSREFSDYRDTRQNNSHV-----------YV 88
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC---HTTAAKDD 116
GL + ++ ++L G G G+ Q + F + +
Sbjct: 89 GLRGGGANFEKACSSGSSKCNDDTL---GYGFYGGY--QFTSW-FALEAALTDYGSISAT 142
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
++ Y + L Y G + S+ E
Sbjct: 143 YYGTNKVSVETWGSELSGVFSYDLFESLDAYLRVGASYQHAHKESIWPTEELVG------ 196
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
VV +GLDY ++ SL Y++I K+D+ VD H S
Sbjct: 197 ----DWGVVSAVGLDYRLSTSWSLRGEYQFID--------DTGKNDLTHVDV----HFVS 240
Query: 236 LGINMHF 242
LG+ HF
Sbjct: 241 LGLTYHF 247
>gi|115524901|ref|YP_781812.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris BisA53]
gi|115518848|gb|ABJ06832.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris BisA53]
Length = 250
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 30/211 (14%), Positives = 64/211 (30%), Gaps = 23/211 (10%)
Query: 51 YGIWSGNYVGLHISRLYET------HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
WSG Y+G + + + + G +LG+ Q + VF
Sbjct: 36 VYDWSGFYLGGNGGWGSSRKCWDFVDAAGSFLTSEGCHDASGGTAGGQLGYRWQASNLVF 95
Query: 105 GINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
G+ A + + + K +G + G + + L+Y G
Sbjct: 96 GVEAQGNWADFNGSNVSIAFPTVVNATKVDSFGTFTGQIGNAWGNTLVYLKAGGAVTSDR 155
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + + V+G+G++Y SL Y ++ + +N
Sbjct: 156 YTGYLTSNGVQISDT---VKDNRWGAVVGLGVEYGF-GAWSLGVEYNHMFMQDRLIRFTN 211
Query: 218 ------AKSDVERVDRKGNAHIASLGINMHF 242
A + + + ++ +N F
Sbjct: 212 NGTIAPAGTAYASDRIHQDVDLVTMRLNYRF 242
>gi|209885358|ref|YP_002289215.1| outer-membrane immunogenic protein [Oligotropha carboxidovorans
OM5]
gi|209873554|gb|ACI93350.1| outer-membrane immunogenic protein [Oligotropha carboxidovorans
OM5]
Length = 173
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 49/167 (29%), Gaps = 17/167 (10%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLY--ETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-D 101
W+G Y+G + + + + D G LG N Q +
Sbjct: 16 PAPVAPIYNWTGLYIGAQVGGAFQGNSGFVTDNPLVTGNRDDSSFLGGGVLGANYQFSPN 75
Query: 102 FVFGINCHTTAAKDD-----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+V GI ++ F ++ K V + GY+ +IY GG
Sbjct: 76 WVLGIEGEFNGLSNNRYTFTDGFDGIRVKNDWLASVTGRLGYTWGPGMIYPKGGVAF--- 132
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
+ + S +G GL+YM S Y
Sbjct: 133 ------RDNGGIAATTPFLVSRDTSGYTVGAGLEYMFAPAWSAKIEY 173
>gi|240849918|ref|YP_002971307.1| hemin binding protein B [Bartonella grahamii as4aup]
gi|240267041|gb|ACS50629.1| hemin binding protein B [Bartonella grahamii as4aup]
Length = 582
Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/250 (14%), Positives = 72/250 (28%), Gaps = 34/250 (13%)
Query: 20 PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET---------- 69
P+ + P + + + + G +G + G H S
Sbjct: 340 PSTAEKTVPSAPLVLARSGSSSEPAKASNGTSGAQNGAHHGAHGSGSDANPHGASHGGGH 399
Query: 70 -----HPLADTINRKTYNSLLPNGLGIELGHNIQLEDF-VFGIN-----CHTTAAKDDST 118
A+ +++ G G + + + V+GI +
Sbjct: 400 GSGAHAHGANPHASRSHGGQNMAGHGAQSTQAVDKNNSSVYGIEQMKRVASELGLDQEDE 459
Query: 119 --FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG-- 174
K G ++ G++ D + Y GG D+ V+ ++ +
Sbjct: 460 VETLNHTFKQNWGGATRVRIGFAADRFMPYLAGGIAYGQFQDTISISVKDEDGRVVSSKN 519
Query: 175 --RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
LG G+D+ V ++ + A YRY K E+ + +
Sbjct: 520 LADETKTMIGYTLGGGVDFSVLDNVIVRAEYRYSDFGK-------KKFAKEKFEVNYKTN 572
Query: 233 IASLGINMHF 242
+G+ F
Sbjct: 573 DFRVGVAYKF 582
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 13/120 (10%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L S++ + +LA D+ +P + + W+G Y+G+
Sbjct: 4 KRLITASIFSLISTSTALAADVMIP----HQPAPSTSSAIVAPTF-SWTGLYLGVQAGGF 58
Query: 67 YETHPLA-------DTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDST 118
+A ++++ L G G NI L +F+FG++ + T
Sbjct: 59 SSKSDMALVDQEKNLPLDKEFSPKLSGFVGGFYAGSNIDLGDNFIFGVDTDLMISGKKHT 118
>gi|209886818|ref|YP_002290675.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
gi|209875014|gb|ACI94810.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
Length = 660
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/230 (14%), Positives = 61/230 (26%), Gaps = 41/230 (17%)
Query: 50 EYGIWSGNYVGLHISRLYE----------------THPLADTINRKTYNSLLPNGLGIEL 93
W+G Y G+H+ + + N G++
Sbjct: 5 ALYDWNGWYAGVHVGAIRGLSNWSAIPPGAGAPGLSGSFDLPFNFDFIGGTGNYVAGLQG 64
Query: 94 GHNIQLEDF-VFGINCHTTAAKDD-----------STFYRLKEKYFI------YGDVVLK 135
G+N + G + D + L + YG +
Sbjct: 65 GYNHVFPSRAMLGFESDISFPNSDVQVPFSVRGSQTVSSPLTGQVTYGEAVIHYGSARAR 124
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG----HGSSVVLGIGLDY 191
AGY+ D L+YG GG +Y + + A G G++
Sbjct: 125 AGYAFDHFLLYGTGGLAWSYDQVTRTQVDGVSVGGAATPGTVDTRLLWRLGWAAGAGIEI 184
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + + A Y + + A E + LG+N
Sbjct: 185 PLAANWTAKAEYLATGFGHKGMRFTGA---SEAFNSDLTMQSIRLGLNYR 231
>gi|319409089|emb|CBI82733.1| Hemin binding protein b [Bartonella schoenbuchensis R1]
Length = 367
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 40/126 (31%), Gaps = 10/126 (7%)
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK---GRF 176
Y + G ++ G+ D ++ Y G A + D VE +
Sbjct: 249 YNHTLRQKWSGATRMRIGFVADRIMPYIAVGVTYAQLQDIFSRSVEVAGKEINSFNLSDE 308
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
LG G+D+ + ++ L YRY ++++ + +
Sbjct: 309 TKMMVGYTLGGGIDFAMADNVILRVEYRYSDFGKQKF-------AKDKLELDYKTNDFRV 361
Query: 237 GINMHF 242
G+ F
Sbjct: 362 GVAYKF 367
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 16/128 (12%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDD----EYGIWSGNYVGLH 62
L ++ + + A D+ +PR+ W G Y+G
Sbjct: 4 KYLVSTSIFTLFTASMTQAADIRIPRESRPVVAPVEASSVVSPVIAAPIFSWDGFYLGGQ 63
Query: 63 ISRLYETHP-----------LADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHT 110
I + + L G+ G N+ L + FV G++
Sbjct: 64 IGGFSSKSDRSLYAKQGSSREWAPVGKDALPQLSGFMGGLYAGANVSLGNSFVLGVDTDI 123
Query: 111 TAAKDDST 118
+ T
Sbjct: 124 AWSNKQDT 131
>gi|319898546|ref|YP_004158639.1| Hemin binding protein B [Bartonella clarridgeiae 73]
gi|319402510|emb|CBI76053.1| putative Hemin binding protein B [Bartonella clarridgeiae 73]
Length = 609
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 39/127 (30%), Gaps = 11/127 (8%)
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR-FD 177
Y K G ++ G + + Y GG + + + ++ +N FD
Sbjct: 491 TYTHNLKQKWSGATRIRLGLAAGRFMPYIAGGVAYTKIQGTFSKLIKEIGKENTSSNLFD 550
Query: 178 G--HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
L G D+ + + + + YRY N+K +
Sbjct: 551 SVETMIGYTLSGGFDFAMTDRVLIRSEYRYSDFGEKKFKKINSKY--------YKINDVR 602
Query: 236 LGINMHF 242
+G+ F
Sbjct: 603 IGLAYKF 609
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 38/134 (28%), Gaps = 21/134 (15%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L + S ++ + D+ ++ Y W G Y+G I
Sbjct: 4 KYLVTISVFSFILASRVQGADIINH---------QDSRSIVAPVY-SWKGFYLGGQIGGF 53
Query: 67 YETHPL----------ADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKD 115
++I+ + + G G N + F+ G++ +
Sbjct: 54 SGLTTFNYHKYDNIEKWNSIDEDLSSEIFGFTGGFYAGSNFDFGNGFILGVDTDIVFSNK 113
Query: 116 DSTFYRLKEKYFIY 129
T +K K+
Sbjct: 114 KDTKVFVKNKFKDL 127
>gi|323139417|ref|ZP_08074467.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
gi|322395349|gb|EFX97900.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
Length = 304
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 74/297 (24%), Gaps = 74/297 (24%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
F + + + A D F ++ +W+G +VGL+ +++
Sbjct: 6 FALTALTLAAGSAFAAD---------FPSRESPPPAYIPPPLVWTGFHVGLNAGGTWDSS 56
Query: 71 PL----------ADTINRKTYNSLLPNGLGIELG--------------HNIQL-EDFVFG 105
+++ G LG + Q + V G
Sbjct: 57 QNVSIASAPLFQGGAFGPAPWSAAAALGATGVLGASGNGGFIGGGQIGYTWQFHRNIVAG 116
Query: 106 INCHTTAAKDDSTFYRLKE----------------------KYFIYGDVVLKAGYSVDSL 143
+ L G V + GY
Sbjct: 117 VEADIQGIASGVGGGSLTTTVPVMLPAAPFPSANTVMSASRSLDYLGTVRGRIGYLFSPT 176
Query: 144 LI-YGMGGFGGAYV-------IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
L+ YG GG V +L + F G GL++M
Sbjct: 177 LLLYGTGGLAYGGVSLNVTGLQSFTLGTPGFITTGFGGSSFSDTRVGWSAGGGLEWMFWP 236
Query: 196 DISLSASYRYIPHHIHSVNNSNA----------KSDVERVDRKGNAHIASLGINMHF 242
+ S A Y Y N ++ + + + H+ G+N HF
Sbjct: 237 NWSAKAEYLYYDLGSVRTNAGLTTTVLATGALVWANGTQAQARFDGHVVRAGVNYHF 293
>gi|307946127|ref|ZP_07661462.1| putative outer membrane protein [Roseibium sp. TrichSKD4]
gi|307769791|gb|EFO29017.1| putative outer membrane protein [Roseibium sp. TrichSKD4]
Length = 256
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 62/198 (31%), Gaps = 22/198 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
+W G YVG + T + + G+ G+N Q+ V G+
Sbjct: 76 AGSVWEGGYVGAEAGLSQTLTESKVPGAKSTASKMD-AAFGLFGGYNWQVSRVVLGVEAG 134
Query: 110 TTAAKDD-----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
T S ++K + + G +S + Y G
Sbjct: 135 ATYLGGQAKKNLSGVGQVKAGSQWSASLRGRVGLPFESFMPYLTAGLA-----------A 183
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
++K G ++ G GL+ V+ + + A Y + + N R
Sbjct: 184 TDHSTKANGKTHSALGVGLMFGGGLEVAVSENWRVRADY-----SMTGILNEKDMFGGTR 238
Query: 225 VDRKGNAHIASLGINMHF 242
++R H LG++ F
Sbjct: 239 IERTAANHRLMLGVSYAF 256
>gi|156739524|gb|ABU93422.1| Omp25 [Brucella neotomae]
Length = 128
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 15/142 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y GL++ + + + K + G G N Q + V+G+ +
Sbjct: 1 GGYTGLYLGYGWNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWA 56
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ L+ K G + + GY ++ ++ Y G G+ + + N
Sbjct: 57 KKSKDGLEVKQGFEGSLRARVGYDLNLVMPYLTAGIAGSQIKLN-----------NGLDD 105
Query: 176 FDGHGSSVVLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 106 ESKFRVGWTAGAGLEAKLTDNI 127
>gi|260459523|ref|ZP_05807778.1| outer membrane protein-like protein [Mesorhizobium opportunistum
WSM2075]
gi|259035077|gb|EEW36333.1| outer membrane protein-like protein [Mesorhizobium opportunistum
WSM2075]
Length = 436
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 68/200 (34%), Gaps = 17/200 (8%)
Query: 52 GIWSGNYVGLHISRLYETHPLA-DTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINC 108
W+G Y+G + H + + +N L G + +G++ +V G+
Sbjct: 244 YNWTGFYIGGGLGAGASVHQIEIPPLGGAKFNGLGGEGAFGELNVGYDQDFGSWVAGVMV 303
Query: 109 HTTAAK----DDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEK 163
+ D + DV+ + G ++ L Y + G+ + ++ +
Sbjct: 304 DARYSGMTSKLDLGVGSINVDTDYGFDVLGRVGMKMNESTLAYALAGYSWQHFDLNASDP 363
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
V D S +G GL+ V+ ++++ YRY ++ +
Sbjct: 364 VGDIA--------DWGSSGFSVGAGLETAVSSNMTIGLEYRYSQFAEKDLSFLLGSGAPD 415
Query: 224 R-VDRKGNAHIASLGINMHF 242
V + H LG F
Sbjct: 416 GLVTTTPSFHTVRLGAKYKF 435
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 70/214 (32%), Gaps = 21/214 (9%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNI 97
A + V+ + WSG YVG + H L + N + G+ + G++
Sbjct: 26 AADVVQPVEASGFNWSGLYVGFGVGAGANVHKLGSDFIPISLNGIGGEGVYGELTAGYDY 85
Query: 98 QLED-FVFGINCHTTAAKD----DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGF 151
+ F+ G D+ + + D L+ GY + L Y +GG+
Sbjct: 86 MVSPRFLLGGLLDVHVGDIKTKIDAAGFDASIQETYGFDAGLRVGYLFTPNTLGYVLGGY 145
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
NA FD S +G G++ +N + ++ YRY
Sbjct: 146 SWQKYKLD----------SNAGFGFDWDQSGYFVGGGIETAINSNWTIKTEYRYTRFGTK 195
Query: 212 SVNNSNAKSDVER---VDRKGNAHIASLGINMHF 242
S A ++ + H + N F
Sbjct: 196 GDLLSEAGLIGAPDGLLNLDTSRHTFQIAANYRF 229
>gi|13470603|ref|NP_102172.1| outer membrane protein-like [Mesorhizobium loti MAFF303099]
gi|14021345|dbj|BAB47958.1| outer membrane protein-like [Mesorhizobium loti MAFF303099]
Length = 430
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 68/201 (33%), Gaps = 18/201 (8%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGI----ELGHNIQLEDFVFGI 106
W+G YVG + H L + + G+ +G++ +V G+
Sbjct: 238 TYNWTGFYVGGALGAGTAVHDLGVDLGGGALDLNGIGSEGVLGEASIGYDYDFGSWVAGV 297
Query: 107 NCHTTAAKD----DSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSL 161
+ + D +K D + + G V+ L Y +GG+ + +
Sbjct: 298 QLDASYSGIRSKLDIPGGSIKLDNDYGFDALARVGAKVNESTLAYVIGGYSYQHFDLHAS 357
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ V D + S +G GL+ V+ ++++ YRY ++ D
Sbjct: 358 DPVGDI--------IDWNKSGFTVGGGLETAVSSNMTVGLEYRYSQFGKKDFSSEFGAPD 409
Query: 222 VERVDRKGNAHIASLGINMHF 242
D K + +G F
Sbjct: 410 GTLTD-KASFQTVRIGAKYKF 429
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/244 (17%), Positives = 86/244 (35%), Gaps = 35/244 (14%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+ ++ + + + A D+ P + WSG Y+G+
Sbjct: 8 KSFLLGAVSAVALMSAAQAADVVQP---------------VEASGFNWSGAYIGIGGGFG 52
Query: 67 YETHPLADTINRKTYNSLLPNGL--GIELGHNIQL-EDFVFGINCHTTAAKDDST----F 119
H + +N + NG+ + G++ + + F+ G +
Sbjct: 53 ASVHKFSVAP-IIDFNGIGGNGVFGELTAGYDYMVSDRFLLGGFIDANGGNIGPSISIPG 111
Query: 120 YRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+ DV L+AGY ++ L Y +GG+ + E N F
Sbjct: 112 ADIDLTNSYGFDVGLRAGYLLNPDTLGYVLGGYSWQHFKLDGSGFAEGLN-------FTQ 164
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ S VLG+G++ ++ + +L YRY + SV + S ++ + + H +
Sbjct: 165 NRSGYVLGVGMETVLRGNWTLKTEYRYAAYGDKSVIDFGGGS----LNVEPSTHTFHIAA 220
Query: 239 NMHF 242
N F
Sbjct: 221 NYRF 224
>gi|319783284|ref|YP_004142760.1| OmpA-like transmembrane domain-containing protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317169172|gb|ADV12710.1| OmpA-like transmembrane domain-containing protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 217
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 65/209 (31%), Gaps = 19/209 (9%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPL-ADTINRKTYNSLLPNGLGIELGHNIQL 99
D + D W G Y G+ + E + + +++ +G G+N+Q
Sbjct: 21 DMTIAPVDTPEWTWQGPYAGVFGAGTLEHYKIYGPGAQAGATHNVGSATVGGFAGYNLQS 80
Query: 100 EDFVFGINCHTTA------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
V+G+ D L ++G V + G + + + + G
Sbjct: 81 GKIVYGVEGELGYRFKKNTFDDIPGPGVLDASTGLFGSVKGRVGMDMGAYMPFVTAGVTA 140
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
A + D V+G G+D + +++ L Y + S+
Sbjct: 141 AKLKTFY---------PGGNAERDATLVGGVVGAGIDVALTHNVFLRGEYDFSFFGKKSL 191
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ H +GI M F
Sbjct: 192 EYCGGGC---TLEHTLQTHDFRVGIAMKF 217
>gi|49473905|ref|YP_031947.1| hemin binding protein b [Bartonella quintana str. Toulouse]
gi|21689905|gb|AAM68130.1| hemin-binding protein B [Bartonella quintana]
gi|49239408|emb|CAF25746.1| Hemin binding protein b [Bartonella quintana str. Toulouse]
Length = 453
Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 48/151 (31%), Gaps = 18/151 (11%)
Query: 103 VFGIN-----CHTTAAKDDSTFYRLK--EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
V+GI + L K G L+ G++ D ++ Y GG
Sbjct: 310 VYGIEEVKKVAASLGVDQGGRAETLTHTLKQNWAGATRLRIGFAADRIMPYVAGGIAYTQ 369
Query: 156 VIDSSLEKVESDNSKNAK----GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ D ++ + + LG G+D+ + ++ L A YRY
Sbjct: 370 LQDIVSISLKEQDGEAVSRKNLTNETKTMIGYTLGGGIDFAMTDNVLLRAEYRYSGFGKK 429
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
E+++ + +G+ F
Sbjct: 430 KF-------AKEKLEVNYKTNDFRIGVAYKF 453
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 13/120 (10%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L V ++V + + A D+ +P A ++ W+G Y G+ I
Sbjct: 4 KRLITVSIFALVSASAAQAADVGIPH-----QSAPTSLPVIAAPAFTWTGFYAGIQIGGF 58
Query: 67 YETHPLADTINRKT-------YNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDST 118
++ K+ L G+ G NI L +F+F I+ + T
Sbjct: 59 SSKTDMSIVGKGKSVLLSKDLLPKLSGFESGLYAGSNIDLGDNFIFNIDTDLIWSGQKYT 118
>gi|126735153|ref|ZP_01750899.1| hypothetical protein RCCS2_14789 [Roseobacter sp. CCS2]
gi|126715708|gb|EBA12573.1| hypothetical protein RCCS2_14789 [Roseobacter sp. CCS2]
Length = 230
Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 79/233 (33%), Gaps = 19/233 (8%)
Query: 25 AVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPL------ADTINR 78
+ D+ + + A + D+ WSG Y G ++ D +
Sbjct: 2 SEDMTNTQLLAALVIAASPTALVADQPFDWSGTYGGFNLDLADPILSGIQDCCADDPGDD 61
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--------DDSTFYRLKEKYFIYG 130
LG G NI +V+G+ + G
Sbjct: 62 PGNLDPSAVALGGHFGFNIVQNQWVYGVEGAFFYGGLVDSQLSQSEPIANESDIDINGIG 121
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ + G +++G+ G A + + ++ N+KG D G ++G G+D
Sbjct: 122 SLRGRIGRIAGDAMVFGILGASYADATYTMRDP----DAANSKGSADLSGWGYMIGAGID 177
Query: 191 YMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + S SY R+I + ++ S+ E + N + GI+MHF
Sbjct: 178 LPLTENTSARVSYERHIFDTRVATDDLTTDSNEEDFVKLENVDVLHFGISMHF 230
>gi|110634323|ref|YP_674531.1| OmpA-like transmembrane region [Mesorhizobium sp. BNC1]
gi|110285307|gb|ABG63366.1| OmpA-like transmembrane region [Chelativorans sp. BNC1]
Length = 216
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 64/190 (33%), Gaps = 24/190 (12%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y G+ + + AD + G Q FV+G+
Sbjct: 50 WAGPYAGIALGYGFSGEVSAD--GAPGEVETDGFVGNVFGGWQGQSGQFVYGVEGDIGYN 107
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + + ++ + G + + GY+ D++L+Y GG + + S ES+
Sbjct: 108 GMEGSEGGVDVEHGVDGSLRARLGYAATDNVLLYATGGGAASRLEASGGGLTESE----- 162
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G G+D + YRY ++ + VD ++
Sbjct: 163 ------TAVGWTAGAGVDVKLTPKSFARLEYRYTDLS----------AEFDSVDVDTTSN 206
Query: 233 IASLGINMHF 242
LG+ M F
Sbjct: 207 KVMLGVGMQF 216
>gi|163867547|ref|YP_001608746.1| hemin binding protein B [Bartonella tribocorum CIP 105476]
gi|161017193|emb|CAK00751.1| hemin binding protein B [Bartonella tribocorum CIP 105476]
Length = 544
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 57/204 (27%), Gaps = 24/204 (11%)
Query: 56 GNYVGLHISRLYETHPLADTINRKT--YNSLLPNGLGIELGHNIQL----EDFVFGIN-- 107
G Y H +H + + + + Q E V+GI
Sbjct: 348 GGYHSAHGGGYAYSHGTSQSGGHGSGARGHNANPHSRSHGAQSTQAADKNESSVYGIEQM 407
Query: 108 ---CHTTAAKDDSTFYRL--KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
+ L K G ++ G++ D + Y GG D+
Sbjct: 408 RRMASELGLEQGDEVETLDHTFKQNWGGATRVRIGFAADRFMPYLAGGIAYGQFQDTISI 467
Query: 163 KVESDNSKNAKG----RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
V+ + LG G+D+ V ++ + A YRY
Sbjct: 468 SVKDEEGTVVSSKNLTDETKTMIGYTLGGGVDFSVLDNVIVRAEYRYSDFGKKKF----- 522
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
E+++ + +G+ F
Sbjct: 523 --SKEKLEVNYKTNDFRVGVAYKF 544
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 13/120 (10%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L S++ + +LA D+ +P + + + W+G Y+G+
Sbjct: 4 KRLITASIFSLISASTALAADVLIP----HQPASSTSSTIVAPTF-SWTGLYLGVQAGGF 58
Query: 67 YETHPLADTINRKTYNS-------LLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDST 118
LA K++ L G G NI L F+FGI+ + T
Sbjct: 59 SSKADLALVGQEKSFPLDKEFSPKLSGFAGGFYAGSNIDLGDSFIFGIDTDLMLSGKKHT 118
>gi|83956056|ref|ZP_00964538.1| outer membrane protein [Sulfitobacter sp. NAS-14.1]
gi|83839622|gb|EAP78801.1| outer membrane protein [Sulfitobacter sp. NAS-14.1]
Length = 199
Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 70/204 (34%), Gaps = 35/204 (17%)
Query: 54 WSGNYVGLHISRLYETHPLAD------TINRKTYNSLLPNGL--GIELGHNIQLEDFVFG 105
W+G YVG +IS + + D T N + N P+G+ + G++ Q VFG
Sbjct: 16 WTGGYVGGNISYGFGSLDANDDLASALTTNGFSDNLSEPDGVSAALRAGYDWQFGRGVFG 75
Query: 106 INCHTTAAKDDS------TFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVID 158
+ D + + + + GY V D+ L YG+ G+ A
Sbjct: 76 LGAEYNFGSYDGDGEGILAGSGVDVEIQDMATIFARGGYLVKDNFLAYGLLGYSQAEGEV 135
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
S ES++ V +G G +YM + + A Y Y
Sbjct: 136 SLGGDSESEDL-----------DGVTIGFGGEYMFTQNWTGYAEYTYTDFGDV------- 177
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
D + + G+N F
Sbjct: 178 --DNTDGQLEADLQQIKFGVNYRF 199
>gi|156739528|gb|ABU93424.1| Omp25 [Brucella melitensis]
Length = 124
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 15/138 (10%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
GL++ + + + K + G G N Q + V+G+ + +
Sbjct: 1 GLYLGYGWNKAKTSXVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSK 56
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
L+ K G + + GY ++ ++ Y G G+ + + N
Sbjct: 57 DGLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKF 105
Query: 180 GSSVVLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 106 RVGWTAGAGLEAKLTDNI 123
>gi|222149200|ref|YP_002550157.1| outer membrane protein [Agrobacterium vitis S4]
gi|221736185|gb|ACM37148.1| outer membrane protein [Agrobacterium vitis S4]
Length = 212
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 84/226 (37%), Gaps = 29/226 (12%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTIN 77
V ++A D +D A VE W+G Y+G++ + L+
Sbjct: 15 VSTGIAMAAD-----AVDQVPTAPAAVE--TPAAFSWAGGYIGVYGGYGWLDATLSQGGA 67
Query: 78 RKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ N +G G N + + + G+ +++ + +K + G +A
Sbjct: 68 SLSDN-FDGGRIGGFGGWNFDVGHNVILGVEADVNYDWNENNYSGVKVGMDVSGSARARA 126
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY++D LI+ GG + K++ G F+ + +G G+DY +
Sbjct: 127 GYAIDRALIFVAGG-----------WTADRTYIKSSSGDFNKTLNGWTIGAGVDYAITNR 175
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I YRY + ++ +D ++ +LGI + F
Sbjct: 176 IFTRLEYRYNDYGTKNI---------SGIDFDSKQNVVNLGIGIKF 212
>gi|49475068|ref|YP_033109.1| hemin binding protein b [Bartonella henselae str. Houston-1]
gi|49237873|emb|CAF27069.1| Hemin binding protein b [Bartonella henselae str. Houston-1]
Length = 391
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 11/126 (8%)
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG----RF 176
K G ++ G+SVD ++ Y GG A + D+ ++ ++
Sbjct: 273 SHTLKQNWAGATRVRVGFSVDRVMPYFAGGIAYAQLHDTISISIKKNDESVVTSKNLTDE 332
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
LG G+D+ + ++ L A YRY E+++ + +
Sbjct: 333 KKTMIGYTLGGGVDFAMTDNVLLRAEYRYSDFGKKKF-------AKEKLEINYKTNDFRV 385
Query: 237 GINMHF 242
G+ F
Sbjct: 386 GVAYKF 391
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 13/120 (10%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L V +++ + + A D+ +PR+ L W+G Y G+
Sbjct: 4 KRLITVSIWALIAASTAHAADVGIPRQSVLAASPVITAP-----TFTWTGFYAGIQAGGF 58
Query: 67 YETHPLA-------DTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDST 118
L+ +++ L G G NI L DF+FG++ T + T
Sbjct: 59 SSKTDLSIVGKDKTVPLSKDLSPKLSGFEGGFYAGSNINLGDDFIFGVDTDLTLSGQKHT 118
>gi|83308666|emb|CAJ01574.1| outer membrane protein [uncultured bacterium]
Length = 304
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 65/255 (25%), Gaps = 66/255 (25%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLL-------------------------PNG 88
W+G YVG + + T +
Sbjct: 39 WTGLYVGFNAGGTWSNSTTIHTTTEDIVGNPGVVGGPAFGVASADLATGSISPVNHSGFI 98
Query: 89 LGIELGHNIQLED----FVFGINCHTTAAKDDSTFYRL--------------------KE 124
G ++G+N Q + +V GI ++ + +
Sbjct: 99 GGGQVGYNYQFNNSWSSWVAGIEADIQGVAASNSAHLVFGQAFVPGFAGSPIDQNLSSSM 158
Query: 125 KYFIYGDVVLKAGYSVDSLLI-YGMGGFGGAYVIDSSLEKVESDNSKN------AKGRFD 177
G V + G+++ L+ YG GG + +N + G
Sbjct: 159 TGDFLGTVRGRLGFTIIPTLLFYGTGGLAYGQTDSRTSITQIVENDPALPNHYSSFGSIS 218
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER----------VDR 227
G G +++ + S+ Y Y S + ++
Sbjct: 219 NSRVGWTAGGGGEWLFAPNWSVKVEYLYYNLGSVSYGLTPLQNFNTAGTLFTDGAPFSRA 278
Query: 228 KGNAHIASLGINMHF 242
+I G+N HF
Sbjct: 279 SFRGNIVRAGLNYHF 293
>gi|188580104|ref|YP_001923549.1| porin [Methylobacterium populi BJ001]
gi|179343602|gb|ACB79014.1| porin [Methylobacterium populi BJ001]
Length = 254
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 65/209 (31%), Gaps = 26/209 (12%)
Query: 54 WSGNYVGLHISRLY----ETHPLADTINRKTYNSLLPNGLGIELGHNIQLED---FVFGI 106
W+G YVG + + + A G ++G+N Q+ +V G
Sbjct: 52 WTGFYVGANAGYGFRGGSSRYSDATYGTVTESGGKGGFVGGGQIGYNYQITPGSGWVLGA 111
Query: 107 NCHTTAAKDD---------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
A + +Y + YG + + GY+ D L+YG GGF
Sbjct: 112 EADLQATGFGRRGDGTVGATPYYGVAPSLDWYGTLRGRVGYAFDRWLVYGTGGFAYGGGS 171
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI----HSV 213
S D G G++Y + +S+ Y+ +V
Sbjct: 172 RSPYAS------AYPYTLPDTTRLGYAAGAGIEYALTDHVSVKVEGLYVDLGKQGTGTTV 225
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + + + G+N F
Sbjct: 226 YDATVPAYYGTGRSESGFGVVRGGLNYRF 254
>gi|311280058|ref|YP_003942289.1| hypothetical protein Entcl_2757 [Enterobacter cloacae SCF1]
gi|308749253|gb|ADO49005.1| hypothetical protein Entcl_2757 [Enterobacter cloacae SCF1]
Length = 234
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 69/208 (33%), Gaps = 21/208 (10%)
Query: 56 GNYVGLHISRLYETHPL-----ADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCH 109
G YVG + T+ + T + GI+ GH QL++ V G+
Sbjct: 27 GWYVGGNFGYGSGTNHDVYVVPGNAEASGTPRDIDGTIGGIQAGHYWQLDNNIVLGVETG 86
Query: 110 TTAAKDDSTFYRLKEKYFIYG--------DVVLKAGYSVDSLLIYGMGGFGGAYVID--- 158
AA + Y ++ KAGY++++ LIY G A +
Sbjct: 87 WQAANISGGISNAESISEYYDQIEINQAFNLNFKAGYAIENWLIYTTAGLTVASMDYARG 146
Query: 159 --SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S D DG +G G+++ N S + Y+Y +
Sbjct: 147 CYSDPTTTIKDCLDPYDATADGTRVGYNVGAGVEWKFNNSFSAALEYKYTDLGESDAWLA 206
Query: 217 NAKSDVER--VDRKGNAHIASLGINMHF 242
+ + + K + + IN HF
Sbjct: 207 SDANTLNDSYARYKTDYQEITFRINYHF 234
>gi|319405308|emb|CBI78922.1| putative Hemin binding protein b [Bartonella sp. AR 15-3]
Length = 367
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 11/127 (8%)
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES---DNSKNAKGR 175
Y K G ++ G S ++ Y GG + + + ++ +N+ +
Sbjct: 249 TYTHTLKQKWIGTSRIRLGLSAGRVMPYIAGGIAYTKIQGTFAKSIKEIGKENTSASSFD 308
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
LG G D+ + I L + YRY N N K +
Sbjct: 309 SAETMIGYTLGGGFDFAMTDRILLRSEYRYSDFGEKKFNKINLKY--------YKTNDFR 360
Query: 236 LGINMHF 242
+G+ F
Sbjct: 361 VGLAYKF 367
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 21/127 (16%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE- 68
V L+I + + A D+ +P +N++ W G Y+G +
Sbjct: 1 MTVSILAISLTSRIQAADIVVP----------SNLKSISAPVYSWEGFYLGGQMGSFSSF 50
Query: 69 ---------THPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST 118
++I+ + L G G N + FV GI+ + +T
Sbjct: 51 TTLQYNDIDKTKKWNSIDEDFSSDLSGITGGFFAGFNFDWGNRFVLGIDTDIVFSNKRNT 110
Query: 119 FYRLKEK 125
+K K
Sbjct: 111 KVFVKNK 117
>gi|319783372|ref|YP_004142848.1| outer membrane protein-like protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169260|gb|ADV12798.1| outer membrane protein-like protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 400
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 70/205 (34%), Gaps = 17/205 (8%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DF 102
++ WSG YVG+ H + + G++ + F
Sbjct: 2 QPVEEAAGFNWSGAYVGIGGGFGASVHKFSVPGLDFNGLGGNGVFGELTAGYDYMVSERF 61
Query: 103 VFGINCHTTAAKDDS----TFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVI 157
+ G + + DV L+AGY ++ + L Y +GG+ +
Sbjct: 62 LLGGFIDANLSNIGPSLSIAGGDVDLTNSYGFDVGLRAGYLLNPNTLGYVLGGYTWQHFK 121
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ F + S VLG+G++ ++ + +L YRY + SV +
Sbjct: 122 LDGSGAADG-------LEFSQNRSGYVLGVGMETVLRGNWTLKTEYRYADYGDKSVLDLG 174
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
S +D + + H + N F
Sbjct: 175 DAS----LDIEPSTHTFHIAANYRF 195
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 62/202 (30%), Gaps = 21/202 (10%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGI-----ELGHNIQLEDFVFG 105
W+G Y G + H L + L G +G++ +V G
Sbjct: 209 TYDWTGFYAGGALGAGTMVHDLNLNLGLGASGELNGIGGEGVFGEASVGYDHDFGSWVAG 268
Query: 106 INCHTTAAKD----DSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSS 160
+ + D +K D + + G V+ L Y +GG+ +
Sbjct: 269 VQLDARYSGIQTKLDLGPVSIKGDADYGFDALARIGAKVNESTLAYVLGGYSWQH----- 323
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + +D S +G GL+ V+ ++++ YRY + +
Sbjct: 324 FDLHAEAPGGGSADIYDWGSSGFSIGGGLETAVSSNMTVGLEYRYSQYQKEDFGSGGILE 383
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D + LG F
Sbjct: 384 DT------PSFQTVRLGAKYKF 399
>gi|156739552|gb|ABU93436.1| Omp25 [Brucella abortus]
Length = 123
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 15/137 (10%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
L++ + + + K + G G N Q + V+G+ + +
Sbjct: 1 LYLGYGWNKAKTSTVGSIKPDD----WKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKD 56
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
L+ K G + + GY ++ ++ Y G G+ + + N
Sbjct: 57 GLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFR 105
Query: 181 SSVVLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 106 VGWTAGAGLEAKLTDNI 122
>gi|15420210|gb|AAK97315.1|AF321116_1 Pap31 [Bartonella henselae phage 60457]
Length = 221
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 62/228 (27%), Gaps = 63/228 (27%)
Query: 25 AVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT------INR 78
A D+ +P + W+G Y+G + + D ++
Sbjct: 1 AADVIVPH--------EVAPTVISAPAFSWTGFYIGGQVGNFSSKVEITDPNKKDKLFSK 52
Query: 79 KTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK----------------------- 114
GI G N+ L + + G+ A
Sbjct: 53 DDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTFSAGAIGEDKLEKFKAS 112
Query: 115 -------------------DDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGA 154
+D L K G ++ G+ + D ++ Y GG A
Sbjct: 113 LKNANADVAKDKKIDDIVKEDKHTDSLALKEKWSGATRVRIGFTAADRIMPYVAGGVSYA 172
Query: 155 YVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
V S KV +++ + LG G+D+ + ++
Sbjct: 173 QVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDFAMTDNV 220
>gi|254470977|ref|ZP_05084380.1| outer membrane protein, hypothetical [Pseudovibrio sp. JE062]
gi|211960119|gb|EEA95316.1| outer membrane protein, hypothetical [Pseudovibrio sp. JE062]
Length = 228
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 57/195 (29%), Gaps = 17/195 (8%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC 108
W G Y+G+ + YN +G+ G+N ++ + G+
Sbjct: 50 PPEYDWDGFYLGVQGGWARLHGTNRFNNSGSQYN---GGTVGLYGGYNYTYQNILIGVEG 106
Query: 109 HTTAAKDDS-TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + + + ++AG + D + Y GG + S+
Sbjct: 107 EGAYWAFGERSRGEMSLRSDYFAAAKIRAGLTYDWFMAYVTGGAAVSTFRASNPNF---- 162
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
G V G GL+ V I + Y I S R
Sbjct: 163 ----GPGTDSNTMLGWVGGAGLEMFVTERIIVRLDYERIVFPGRSFTVGG-----TRFKE 213
Query: 228 KGNAHIASLGINMHF 242
++ LG++ F
Sbjct: 214 DIDSDAIRLGVSYKF 228
>gi|319406584|emb|CBI80226.1| Hemin binding protein C [Bartonella sp. 1-1C]
Length = 304
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 48/144 (33%), Gaps = 21/144 (14%)
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV-------- 164
+ T Y K G ++ G++ D ++ Y GG + D+
Sbjct: 168 SDVKFTKYDHTLKAKWAGATRVRIGFAADRIMPYVAGGVAYTQLQDTFTTLTGIQKIPVQ 227
Query: 165 ------ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
E + K+ L G+D+ + ++ L A YRY ++N
Sbjct: 228 KADGKDEETSGKSNTVDESKTMIGYTLAAGVDFAMTDNVLLRAEYRYSDFGKKKLHN--- 284
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
++ + A+ +G+ F
Sbjct: 285 ----DKFEVNYKANDFRVGVAYKF 304
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 40/129 (31%), Gaps = 19/129 (14%)
Query: 4 NGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHI 63
N L ++++ + + A D+ +P++I W+G Y+G I
Sbjct: 2 NNMKCLITASVVALMTASAAQAADIKVPQEIGETIVVAPAFS--------WTGFYLGGQI 53
Query: 64 SRLYETHPLAD----------TINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA 112
+ +++K G G N+ L + + G++
Sbjct: 54 GGFSSKTSFSSLADGDSKKWFPLDKKLSPKPSGFIGGFYAGSNVDLGNGLILGVDTDVVF 113
Query: 113 AKDDSTFYR 121
+ T
Sbjct: 114 SGRKDTRND 122
>gi|302381465|ref|YP_003817288.1| porin [Brevundimonas subvibrioides ATCC 15264]
gi|302192093|gb|ADK99664.1| porin [Brevundimonas subvibrioides ATCC 15264]
Length = 277
Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 58/204 (28%), Gaps = 31/204 (15%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
L + N + G +G++ Q +FV G + + +
Sbjct: 79 GGSAKGDLPSNGCDEDSNGVEG---GGRIGYDFQFGNFVVGAVGEYSGVDAEDSVTSYST 135
Query: 125 ---------KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + GY+ L+Y GG + + +
Sbjct: 136 TPAYYVSERNLNNLAALRARVGYAYGPALVYATGGVATGEMTNRFYSSNGQNTFTATT-- 193
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN-----------------SNA 218
D G G++Y + +S++ Y Y N +
Sbjct: 194 DDDQADGYQAGGGIEYALAPHLSVTGEYIYTSLEASDFNVRVGRGIAIATNPFVLAPNTT 253
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+D++R + + H +G+N F
Sbjct: 254 GTDIQRSNGRFGLHAVRIGMNYRF 277
>gi|310816178|ref|YP_003964142.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
gi|308754913|gb|ADO42842.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
Length = 202
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 71/236 (30%), Gaps = 35/236 (14%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L + + A L P A V W+G Y G ++
Sbjct: 2 KNLIVATTALVASATFAQAGGLAAP--TIEAPVAAPVVIAAPAPVTTWAGAYAGAALTYG 59
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ T S+ G+ + G++ Q +V G+ +D + +
Sbjct: 60 ETEGSVG-----GTSESIDGVGVALRGGYDWQFGSWVLGLGAEYAYNNEDGDVFGATAER 114
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
V +AGY++D+ L Y G+ + G
Sbjct: 115 KDSAAVFARAGYALDTWLPYVSAGYTWSD---------------AEVAGTSYDLEGATYG 159
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G++ + +IS A Y + DV+ V +G LG+N F
Sbjct: 160 VGVEKLFTQNISGFAEYSFADFD-----------DVQGVSVEGQG--VKLGVNYRF 202
>gi|222086964|ref|YP_002545498.1| heat resistant agglutinin 1 protein [Agrobacterium radiobacter K84]
gi|221724412|gb|ACM27568.1| heat resistant agglutinin 1 protein [Agrobacterium radiobacter K84]
Length = 284
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 76/263 (28%), Gaps = 44/263 (16%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
+++V + A DLY P E + SG Y+ + + +
Sbjct: 9 VAALLVGTSAFAADLYTPEPAQQTPEVAVSQS---------SGWYLRGDVGYAFTKLRGS 59
Query: 74 DTINRKTYNSLLPNGLGIE------LGHNIQLEDFV-------FGINCHTTAAKDDSTFY 120
+ + + + + G Q+ +++ + + +
Sbjct: 60 NYFQGSNSSLVDFDSAKLNGNMTLGGGVGYQINNYLRTDVTLDYLFKSNFKGSTTGDCGG 119
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLL--------------IYGMGGFGGAYVIDSSL----- 161
+ +A + SLL Y GG GG YV S L
Sbjct: 120 CGPGFTAVPATSRDRASLTAYSLLANAYVDLGTYSIFTPYVGGGLGGTYVKWSDLKNTSC 179
Query: 162 --EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+S + + + L G ++ ++ YRY ++ A+
Sbjct: 180 SDANPDSCDGTVSHKGRGSWRFTYALMAGTSIDLSCNLKADVGYRYRHIEGGNM-FGYAE 238
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ D+ N H A +G F
Sbjct: 239 NGGPGYDKGINLHEARIGARYTF 261
>gi|319898376|ref|YP_004158469.1| Hemin binding protein E [Bartonella clarridgeiae 73]
gi|319402340|emb|CBI75879.1| Hemin binding protein E [Bartonella clarridgeiae 73]
Length = 299
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 10/123 (8%)
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ K G ++ G++ D ++ Y GG + D+ + ++ K
Sbjct: 187 FNHSLKEKWTGATRVRIGFAADRIMPYVAGGISYVELQDTLSVVIGTEE---NKADESKT 243
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G G+D+ + I + YRY E VD + +G+
Sbjct: 244 MIGYTFGGGVDFALTNSIIVRTEYRYSDFGKKKF-------AKEEVDLSYKTNNFRVGVA 296
Query: 240 MHF 242
F
Sbjct: 297 YKF 299
>gi|170745396|ref|YP_001766853.1| putative outer membrane protein [Methylobacterium radiotolerans JCM
2831]
gi|170658997|gb|ACB28051.1| putative outer membrane protein [Methylobacterium radiotolerans JCM
2831]
Length = 577
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 62/239 (25%), Gaps = 42/239 (17%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLAD--------------TINRKTYNSLLPNGLGI 91
Y W+G Y GL I S G
Sbjct: 31 YPVPPIFSWTGAYAGLFTGYGSLDSNTKFICTAPGRQAGAPECPILPSRRASDASFIGGG 90
Query: 92 ELGHNIQLED-FVFGINCHTTAAKD------------------DSTFYRLKEKYFIYGDV 132
E+G+N Q V G + + ++
Sbjct: 91 EVGYNWQTPSGLVAGAAADYQFTRLWGYGRQEGDFKTVDGSVFFDSVAHSGQRLDDLATF 150
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS----SVVLGIG 188
K G+SVD IY GG +V + + FDG G V G+G
Sbjct: 151 RGKIGFSVDQTFIYVTGGLAVGHVRIDNNLNLSIKPDAAPAAAFDGRGGAVRLGYVAGMG 210
Query: 189 LDYMVNYDISLSASYRYIPHHIHSV-----NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ + +S Y +V + + +A +G+N F
Sbjct: 211 IEHAFSERLSAKVEGLYYNLGSRAVVPDQTSGGELPGYRAGTRIATDGFLARVGLNYRF 269
>gi|256809537|gb|ACV30869.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 44/138 (31%), Gaps = 11/138 (7%)
Query: 13 VFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPL 72
+ + + A D + + W+G Y GL++ +
Sbjct: 4 LAALLPFSATAFAADAIQEQP-------PVPAPVEKAPQYSWAGGYTGLYLGYGWNKAKT 56
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDV 132
K + G G N Q + FV+G+ + T L+ K G +
Sbjct: 57 DTVGTVKPDDMK----AGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEGSL 112
Query: 133 VLKAGYSVDSLLIYGMGG 150
+ GY ++ ++ Y G
Sbjct: 113 RARLGYDLNPVMPYITAG 130
>gi|310816739|ref|YP_003964703.1| TonB-dependent heme/hemoglobin receptor family protein
[Ketogulonicigenium vulgare Y25]
gi|308755474|gb|ADO43403.1| TonB-dependent heme/hemoglobin receptor family protein
[Ketogulonicigenium vulgare Y25]
Length = 1121
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 65/247 (26%), Gaps = 43/247 (17%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL----------LPNG 88
+AD G W G Y GL +YN+
Sbjct: 875 QADARSSAVQPFDGNWGGAYAGLTFGAARFAAEGETYAGDGSYNANAAIERTDTAASSAV 934
Query: 89 LGIELGHNIQLED-FVFGINCHTT-------------------AAKDDSTFYRLKEKYFI 128
G++ G+ Q + V G+ ++++ +
Sbjct: 935 AGLQFGYRKQQDSGLVLGVEASVDFARGRAQQYMIDETLDVDRWGENNTRAADYTHSWGA 994
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGA---YVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
+ G + ++ G G N + + VV+
Sbjct: 995 TAMLRGSVGQTFGRAHLFATAGLGMMEEHQTRTQYRLVSGIVNYPSFSETDSQLRTGVVV 1054
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR----------KGNAHIAS 235
G G+DY + +SL Y Y + + N A + + + H
Sbjct: 1055 GAGMDYAFSNALSLRGEYVYGYYPEKNFNFDRASNGTTAAGLLDQIGRQAGSELHTHALR 1114
Query: 236 LGINMHF 242
+G+N F
Sbjct: 1115 IGLNYRF 1121
>gi|296447741|ref|ZP_06889657.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
gi|296254773|gb|EFH01884.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
Length = 248
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 57/196 (29%), Gaps = 10/196 (5%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF-GINCHTTA 112
W G Y+G L + L G +G+N + GI
Sbjct: 43 WRGFYLGGFAGALLGDGTFTYFEQTPMRGAALVG--GGTIGYNWMWTPTLLVGIEADFGY 100
Query: 113 -----AKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVES 166
++ + Y + G + GY+ L Y GF
Sbjct: 101 RGQVYSERVNRVYPGPTDGGVLGTARARLGYAFAPRWLSYATAGFAYGTDFPPRGFTSTM 160
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ + + G G++Y + IS+ A Y Y+ V S V +
Sbjct: 161 PLTFGVQNTGTTVRAGWTAGAGVEYAWSDLISVKAEYLYVRLADSGVAYSTNFGSV-PLG 219
Query: 227 RKGNAHIASLGINMHF 242
HI G+N HF
Sbjct: 220 VTSAGHIVRGGVNFHF 235
>gi|94497615|ref|ZP_01304184.1| membrane protein [Sphingomonas sp. SKA58]
gi|94423032|gb|EAT08064.1| membrane protein [Sphingomonas sp. SKA58]
Length = 279
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 72/232 (31%), Gaps = 49/232 (21%)
Query: 42 NNVEYQDDEYGIWSGNYVGLHISRLYETHPLA-----DTINRKTYNSLLPNGLG------ 90
QD W+G YVG ++ DT YN ++ G
Sbjct: 19 VPAMAQDSGAVDWTGPYVGGSFGYNWQKSDGGEHLRFDTDADGDYNDVVTTTTGANAFSP 78
Query: 91 --------------------------IELGHNIQLEDFVFGINCHTTAA---------KD 115
+G+++Q FV G+ A
Sbjct: 79 GTCGGAARGPTPASGCNDDKDAIAWMGHVGYDMQFGSFVAGVVAEAGKAYVDDKVTEFST 138
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
FY ++ K G++ + GY+ S ++ Y GG A V ++ +++
Sbjct: 139 TPAFYTMRRKIDWNGNLRARLGYTTPSGIMPYITGGLAYAKVKNNFTTSNGANSFTENNR 198
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
DG +G G++ V+ + S+ A Y + +++ +
Sbjct: 199 SEDGW--GWTMGGGVEAKVSDNFSIGARYLWTRYNVDDYRVDVGAGSAPATN 248
>gi|296446346|ref|ZP_06888291.1| putative 31 kDa outer-membrane immunogenic protein precursor
[Methylosinus trichosporium OB3b]
gi|296256119|gb|EFH03201.1| putative 31 kDa outer-membrane immunogenic protein precursor
[Methylosinus trichosporium OB3b]
Length = 247
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 67/210 (31%), Gaps = 37/210 (17%)
Query: 54 WSGNYVGLHISRLY----ETHPLADTINRKTYNSLLPNGL-----------GIELGHNIQ 98
W+G Y+G ++ + N + + PN G ++G+N Q
Sbjct: 40 WTGFYLGANVGYGWLDNYTRGNSITGWNGAGWVAGAPNVADNGSSNGGVVGGGQVGYNYQ 99
Query: 99 LED-FVFGINCHTTAA---KDDSTFYRLKEKYFIYGDVVLKAGYSV--DSLLIYGMGGFG 152
+V G+ AA + +F +G V + G ++ LLIYG GGF
Sbjct: 100 FHPAWVVGVEADMQAANIGDNGPSFLGTTRAVDWFGTVRARIGTTLFSPELLIYGTGGFA 159
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
V + G L+++ + S Y Y
Sbjct: 160 YGDVRLKHALLGTLGQTGTGWTAGGG----------LEWLFAPNWSAKVEYLYTDIG--- 206
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S+ +++ + G+N HF
Sbjct: 207 ---SSDWGGFNNFEQRVHVQSVRAGVNYHF 233
>gi|256809485|gb|ACV30843.1| 25 kDa outer membrane protein [Ochrobactrum cytisi]
Length = 130
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
+ + W+G Y GL++ + K + G G N
Sbjct: 22 EQPPVPAPVEMAPQYSWAGGYTGLYLGYGWNKAKTDTVGTIKPDDMK----AGAYAGWNF 77
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
Q + FV+G+ + T L+ K G + + GY ++ ++ Y G
Sbjct: 78 QQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEGSLRARLGYDLNPVMPYITAG 130
>gi|218532663|ref|YP_002423479.1| porin [Methylobacterium chloromethanicum CM4]
gi|218524966|gb|ACK85551.1| porin [Methylobacterium chloromethanicum CM4]
Length = 243
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 64/209 (30%), Gaps = 26/209 (12%)
Query: 54 WSGNYVGLHISRLY----ETHPLADTINRKTYNSLLPNGLGIELGHNIQLED---FVFGI 106
W+G YVG + + ++ A G ++G+N QL +V G
Sbjct: 41 WTGFYVGANAGYGFRGSSSSYTDATYGTVIESGGKGGFVGGGQIGYNYQLTSGSGWVLGA 100
Query: 107 NCHTTAAKDDSTFYR---------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ +G V + GY+ D L+YG GGF
Sbjct: 101 EADFQGMTFGRRGDGTIGTTPYHGVAPSLDWFGTVRGRLGYAFDRWLVYGTGGFAYGGGS 160
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH----SV 213
S D +G G++Y + IS+ Y+ +V
Sbjct: 161 ASPYAT------SYPYTLPDTTRLGYAVGGGVEYALTEHISVKVEGLYVDLGKRGSGTTV 214
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ + + + G+N F
Sbjct: 215 YDTSVPAYYGTGRSESGFGLVRGGLNYRF 243
>gi|296282661|ref|ZP_06860659.1| outer membrane protein-like [Citromicrobium bathyomarinum JL354]
Length = 222
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 78/221 (35%), Gaps = 18/221 (8%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR--LYETHPLADTINRKTYNSLLPNGLG 90
+ Q D +SG + + + D N S G
Sbjct: 9 ATGSLAALASPAAAQVDPDSPFSGFRIQGTTGYDQITAGSSVDDDGNDNNDQSAEGVIYG 68
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL--------KAGYSVD- 141
+G+++ L + V G T + D+ + + F +G+V + G +
Sbjct: 69 ATIGYDVDLGNIVIGPEAELTGSTADTDYENGDFEGFGFGNVSAGRDVYVGARIGVKANP 128
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+++ Y GG+ A + S N + D +G GL+Y ++ +
Sbjct: 129 NMMFYAKGGYTNAKLNVRS-------NDGTTEFDTDYDLDGYRVGGGLEYAFGKNMFTNI 181
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YRY + +V+ + D ++ D + H ++G+ + F
Sbjct: 182 EYRYSNYSDANVDFNGTLPDTDQFDVDTDRHQVTVGLGVRF 222
>gi|256809411|gb|ACV30806.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
+ + W+G Y GL++ + K + G G N
Sbjct: 22 EQPPVPAPVEMAPQYSWAGGYTGLYLGYGWNKAKTDTVGTVKPDDMK----AGAYAGWNF 77
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
Q + FV+G+ + T L+ K G + + GY ++ ++ Y G
Sbjct: 78 QQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEGSLRARLGYDLNPIMPYITAG 130
>gi|256809401|gb|ACV30801.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809403|gb|ACV30802.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809405|gb|ACV30803.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809407|gb|ACV30804.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809409|gb|ACV30805.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809413|gb|ACV30807.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809415|gb|ACV30808.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809417|gb|ACV30809.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809419|gb|ACV30810.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809421|gb|ACV30811.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809423|gb|ACV30812.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809425|gb|ACV30813.1| 25 kDa outer membrane protein [Ochrobactrum lupini]
gi|256809427|gb|ACV30814.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809447|gb|ACV30824.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809449|gb|ACV30825.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809451|gb|ACV30826.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809453|gb|ACV30827.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809455|gb|ACV30828.1| 25 kDa outer membrane protein [Ochrobactrum anthropi ATCC 49188]
gi|256809457|gb|ACV30829.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809459|gb|ACV30830.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809461|gb|ACV30831.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809463|gb|ACV30832.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809465|gb|ACV30833.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809467|gb|ACV30834.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809469|gb|ACV30835.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809471|gb|ACV30836.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809473|gb|ACV30837.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809475|gb|ACV30838.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809477|gb|ACV30839.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809479|gb|ACV30840.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809481|gb|ACV30841.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809483|gb|ACV30842.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809487|gb|ACV30844.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809489|gb|ACV30845.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809491|gb|ACV30846.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809493|gb|ACV30847.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809495|gb|ACV30848.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809497|gb|ACV30849.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809499|gb|ACV30850.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809501|gb|ACV30851.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809503|gb|ACV30852.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809505|gb|ACV30853.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809507|gb|ACV30854.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809509|gb|ACV30855.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809511|gb|ACV30856.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809515|gb|ACV30858.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809517|gb|ACV30859.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809523|gb|ACV30862.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809527|gb|ACV30864.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809529|gb|ACV30865.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809531|gb|ACV30866.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809533|gb|ACV30867.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809535|gb|ACV30868.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
+ + W+G Y GL++ + K + G G N
Sbjct: 22 EQPPVPAPVEMAPQYSWAGGYTGLYLGYGWNKAKTDTVGTVKPDDMK----AGAYAGWNF 77
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
Q + FV+G+ + T L+ K G + + GY ++ ++ Y G
Sbjct: 78 QQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEGSLRARLGYDLNPVMPYITAG 130
>gi|170748188|ref|YP_001754448.1| putative outer membrane protein [Methylobacterium radiotolerans JCM
2831]
gi|170654710|gb|ACB23765.1| putative outer membrane protein [Methylobacterium radiotolerans JCM
2831]
Length = 571
Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 64/226 (28%), Gaps = 39/226 (17%)
Query: 54 WSGNYVGLHISRLYETHPLAD--------------TINRKTYNSLLPNGLGIELGHNIQL 99
W+G + GL + S G E+G++ Q+
Sbjct: 40 WTGAHAGLFAGYGTLDRATQFVCTGPDGQPGARNCPVIPSKRASDGSFVGGAEVGYDWQV 99
Query: 100 ED-FVFGINCHTTAAK-------------DDSTFYRLKE-----KYFIYGDVVLKAGYSV 140
FV G + FYR + + + G++V
Sbjct: 100 NSGFVAGAAADYQFTRLWGYDRREGAFPAAGGGFYRRSVAHSGQRLDELATLRGRIGFAV 159
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L+Y GG V + + + + V G G+++ + +S
Sbjct: 160 DRTLVYATGGLAAGTVRTDNNLSLAGFPLFDRRQG--AVRLGYVAGAGIEHAFSEHLSAK 217
Query: 201 ASYRYIPHHIHSVNNSNAKSDVE----RVDRKGNAHIASLGINMHF 242
Y +V + + + + +A +G+N F
Sbjct: 218 VEGLYYDLGSRAVLPAPSYPVLTGYHAGTRVATDGFLARVGLNYRF 263
>gi|254503257|ref|ZP_05115408.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii
DFL-11]
gi|222439328|gb|EEE46007.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii
DFL-11]
Length = 184
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 58/200 (29%), Gaps = 22/200 (11%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
IW+G Y+G + +K Y+ G+ G+N ++ + G+
Sbjct: 2 APAGSIWAGPYLGFEAGGSQTVTEVKAGGQKKDYSRFD-AAFGVFGGYNWEVSRVILGVE 60
Query: 108 CHTTAAKDDSTF-----YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
T D ++ + G +++ + Y G
Sbjct: 61 GAATYIGDTKKGQHPVLGTIETGSKWSVTAKTRVGLPINNFMPYVSLGVA---------- 110
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ K G VLG G++ ++ + L A Y + ++
Sbjct: 111 -ATDHSLKANGRTESSVGLGAVLGAGVEVAMHDNWRLRADYTLTGIADTKDTFAGTQAKR 169
Query: 223 ERVDRKGNAHIASLGINMHF 242
H LGI+ F
Sbjct: 170 T-----AGNHRLMLGISRAF 184
>gi|256809429|gb|ACV30815.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809431|gb|ACV30816.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809433|gb|ACV30817.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809435|gb|ACV30818.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809437|gb|ACV30819.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809439|gb|ACV30820.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809441|gb|ACV30821.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809443|gb|ACV30822.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809445|gb|ACV30823.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809519|gb|ACV30860.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809521|gb|ACV30861.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809525|gb|ACV30863.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809539|gb|ACV30870.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
+ + W+G Y GL++ + K + G G N
Sbjct: 22 EQPPVPAPVEMAPQYSWAGGYTGLYLGYGWNKVKTDTVGTVKPDDMK----AGAYAGWNF 77
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
Q + FV+G+ + T L+ K G + + GY ++ ++ Y G
Sbjct: 78 QQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEGSLRARLGYDLNPVMPYITAG 130
>gi|27375114|ref|NP_766643.1| hypothetical protein blr0003 [Bradyrhizobium japonicum USDA 110]
gi|27348250|dbj|BAC45268.1| blr0003 [Bradyrhizobium japonicum USDA 110]
Length = 197
Score = 88.3 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 25/182 (13%), Positives = 53/182 (29%), Gaps = 19/182 (10%)
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL-------KEKYF 127
+ +G +G+ Q+ + VFG+ A + L
Sbjct: 11 PPVGMGRHHATGGTVGGHIGYRWQIANSVFGLETQGNWADFKGSNANLAFAGVRDDSTLD 70
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
+G + GY+ +++L+Y GG + N +G
Sbjct: 71 AFGLFTGQVGYAWNNVLLYVRGGAAVVRDKYRVSDFATGLTIDNG----SETRWGGTVGA 126
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV--------ERVDRKGNAHIASLGIN 239
GL++ + S+ Y ++ V+ + V + I + +N
Sbjct: 127 GLEFGFAPNWSIGVEYDHLFMGRRDVDFFFSPGLVGVPVGTFAGTARIGQDVDIGLVRVN 186
Query: 240 MH 241
Sbjct: 187 YR 188
>gi|115522859|ref|YP_779770.1| porin [Rhodopseudomonas palustris BisA53]
gi|115516806|gb|ABJ04790.1| porin [Rhodopseudomonas palustris BisA53]
Length = 275
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 21/184 (11%)
Query: 79 KTYNSLLPNGLGIELGHNIQ--LEDFVFGINCHTTAAKD---------------DSTFYR 121
Y+ G +G N Q +++FG+ K +
Sbjct: 83 NNYSLSNTFIGGGTIGLNYQPSASNWLFGVEGEVGYLKLSRSVVDINPVPAGAPGADSID 142
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE--KVESDNSKNAKGRFDGH 179
+YG + GY+ D +L Y GG S + V + + G
Sbjct: 143 RTRIGDLYGVFAARLGYAFDRVLFYAKGGAAFVGKEASFTDKCAVAPCSVNTLNTDYSGT 202
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD--VERVDRKGNAHIASLG 237
+ G GL+Y +N S+ Y Y+ ++NA ++ H +G
Sbjct: 203 QLTWAAGGGLEYAINDSWSVKGEYLYLATKETYTYSANASNNQPYTVSHTDPGVHTGKIG 262
Query: 238 INMH 241
+N
Sbjct: 263 LNYR 266
>gi|312115598|ref|YP_004013194.1| hypothetical protein Rvan_2889 [Rhodomicrobium vannielii ATCC
17100]
gi|311220727|gb|ADP72095.1| hypothetical protein Rvan_2889 [Rhodomicrobium vannielii ATCC
17100]
Length = 249
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 74/236 (31%), Gaps = 33/236 (13%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLA 73
+LA DLY K + E W+G Y+GL +
Sbjct: 19 GSALAGDLYA--KSGYKDAPIVVAEPT------WTGFYIGLGVGGQAVNHELSASDFDAG 70
Query: 74 DTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTTAAKDDSTF-----YRLKEKY 126
D N + G+ +E+G++ Q + V G+ + D S+ + K
Sbjct: 71 DEEWIGDLNGVSGTGVIGTVEVGYDRQFGNIVAGVFFNYDFGDDVSSSLRIEDLNVNAKQ 130
Query: 127 FIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
+ GY V+ L Y +GG+ + + G D + +
Sbjct: 131 TDSWTAGGRLGYLVNPGTLAYVLGGY----------TQSTFELGFPGFGSADDTFAGWTV 180
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
G GL+ ++ + L YR+ + + D + L ++
Sbjct: 181 GGGLETRLSGNWYLKGEYRFTEFDTNRYTLVDEDGDGIGASVDTSVQTVRLVLSYK 236
>gi|256809513|gb|ACV30857.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
+ + W+G Y GL++ + K + G G N
Sbjct: 22 EQPPVPAPVEMAPQYSWAGGYTGLYLGYGWNKAKTDAVGTIKPDDMK----AGAYAGWNF 77
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
Q + FV+G+ + + L+ K G + + GY ++ ++ Y G
Sbjct: 78 QQDQFVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARLGYDLNPVMPYITAG 130
>gi|218533177|ref|YP_002423993.1| porin [Methylobacterium chloromethanicum CM4]
gi|218525480|gb|ACK86065.1| porin [Methylobacterium chloromethanicum CM4]
Length = 299
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 73/304 (24%), Gaps = 90/304 (29%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDE-YGIWSGNYVGLHISRL 66
A ++ +V P +LA DL D + +Y WSG YVG H
Sbjct: 4 ATLALLTTVLVSP--ALAADL------DYGVLRGYDDDYPAPAPIIDWSGFYVGGHGGYS 55
Query: 67 YETHPLADTINRKTYN----------------------SLLPNGLGIELGHNIQLEDFVF 104
+ N G+ G N Q ED V
Sbjct: 56 SAALGFGNAFQPIVANALRYTVAEAEMNASHLLAARATHSGGASYGVFAGVNYQFEDVVV 115
Query: 105 GINCHTTAAKDDSTFYR---------------------LKEKYFIYGDVVLKAGYSVDSL 143
G T T K YG + + GY+ +
Sbjct: 116 GFEADYTYFGQSGTTSDQIARYMITKDNFLSTVNLSGQASTKIQDYGTIRGRLGYAFGNF 175
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS---------------------- 181
L + GG ++ N + G+
Sbjct: 176 LPFVTGGLALGRATVRDTVTIQDYGYNNTTYAANQTGTTKSYIDNDGYSVFFQNNPPGSI 235
Query: 182 ----------------SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ +G GL+Y + + L Y+Y+ + + + +
Sbjct: 236 PAPGTVHGTTKKVTVAGIAVGGGLEYAITPNFLLRGEYQYVLFNDFQGHKAELNTVRGGA 295
Query: 226 DRKG 229
K
Sbjct: 296 AVKF 299
>gi|240142230|ref|YP_002966740.1| hypothetical protein MexAM1_META2p0552 [Methylobacterium extorquens
AM1]
gi|240012174|gb|ACS43399.1| Hypothetical protein MexAM1_META2p0552 [Methylobacterium extorquens
AM1]
Length = 269
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 53/215 (24%), Gaps = 30/215 (13%)
Query: 53 IWSGNYVGLHISRLYETHPLA-----DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
WSG YVG + + P G +G + Q+ VFG
Sbjct: 58 DWSGAYVGFQVGGAFAGKPSIGDDRVTRSLLSNGREFSGFTGGGHVGFDYQVGSVVFGGI 117
Query: 108 CHTTAAKDDSTFYR----------------LKEKYFIYGDVVLKAGYSVD--SLLIYGMG 149
+ I G V + G++ +L Y G
Sbjct: 118 GDINYVDIRAKGAGPFTLVQNGVVTTYNATGTAGLEIDGTVRARLGFAGLDLPILPYVTG 177
Query: 150 GFG---GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G G + + R +G G+DY +I Y Y
Sbjct: 178 GLALGTGFGNFRLLGTDPATGAVTSQNLRDSRTNVGYAVGGGVDYAFTDNIRARVEYLYT 237
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
++ VD + G++
Sbjct: 238 DLSQARYF----QNVSGGVDAGASYSKVQGGLSYR 268
>gi|188582112|ref|YP_001925557.1| porin [Methylobacterium populi BJ001]
gi|179345610|gb|ACB81022.1| porin [Methylobacterium populi BJ001]
Length = 285
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 64/252 (25%), Gaps = 53/252 (21%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL----------------LPN 87
V + W+G Y GLH + +P T + + +
Sbjct: 31 VAFTPVPVFTWTGFYAGLHTGYAFTDNPNIQTRGNDAFTATNVQLARRPASLKSEVDGFS 90
Query: 88 GLGIELGHNIQLED---FVFGINCHTTAAKDD-------------STFYRLKEKYFIYGD 131
+G G+N Q FV G+ T D + G
Sbjct: 91 RIGGGFGYNYQFTPGSGFVAGLAFDATWLDLDKRIGFYGTPNPVVGNASVYTQDLDFLGT 150
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN-AKGRFDGHGSSVVLGIGLD 190
V K GY+ D +YG GG +V + G + G G++
Sbjct: 151 VNGKLGYAFDRFFVYGTGGLAFGHVSYGADFFNPGATVLQYTGGGRKIFETGYNYGGGIE 210
Query: 191 YMVNY-----------------DISLSASYRYIPHHIHSV---NNSNAKSDVERVDRKGN 230
Y + D+++ Y +V +
Sbjct: 211 YAITPDSFLNYFSVGRWLGIQSDVTVKVEYIRYDLGSRNVLINQTAPTPPGSYTSRFSTE 270
Query: 231 AHIASLGINMHF 242
+ G N F
Sbjct: 271 GSLIRAGFNYKF 282
>gi|319405140|emb|CBI78746.1| Hemin binding protein D [Bartonella sp. AR 15-3]
Length = 295
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/312 (11%), Positives = 74/312 (23%), Gaps = 94/312 (30%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+ FF++ +S A + L V W+G Y+G IS
Sbjct: 3 IKSFFFILTISSACVPVVQASERML---------FQEPVSSSTSSQFSWTGFYIGGQISN 53
Query: 66 LYE---------------------THPLADTINRKTYNSLLPNGLGIELGHNIQLED-FV 103
+ ++ L GI G NI + + +
Sbjct: 54 FSSTVTSKAVDLEAALLVDSNDNNKNDKWYAVDSTFLPKPLGMRSGIYTGLNIGIGNNLI 113
Query: 104 FGINCHTTAAKDDSTFY------------------------------------------- 120
G + + + +
Sbjct: 114 VGADTDIMWSGKEDSRTVIIDNGGIPMYRNKSLNESGGVIFNPLGSSRNKSAMYHHILKA 173
Query: 121 ----------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
K G ++ G+S ++ Y G + D + ++
Sbjct: 174 NSAQGGVTILNHTLKEKWTGATRVRIGFSAGHIMPYIAAGVSYVDLKDILSVSLFEREAE 233
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+G+ G G+D + ++ + A YRY V+
Sbjct: 234 TVEGKK---MVGYTFGGGVDVAMIDNVVMRAEYRYSDFGKKKFAKGE-------VELSYK 283
Query: 231 AHIASLGINMHF 242
+ +G+ F
Sbjct: 284 TNDFRVGVAYKF 295
>gi|159044248|ref|YP_001533042.1| hypothetical protein Dshi_1699 [Dinoroseobacter shibae DFL 12]
gi|157912008|gb|ABV93441.1| hypothetical protein Dshi_1699 [Dinoroseobacter shibae DFL 12]
Length = 198
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 65/233 (27%), Gaps = 41/233 (17%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYG-IWSGNYVGLHISRLYET 69
F +++ +P D E G W+G YVG I
Sbjct: 6 FSPVVALALPLALFGAPSLAGSLEDPVVEPVPMAPAPVVVSGRDWTGGYVGAQIGYG--- 62
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY 129
D + G+ G++ +V G A D L++
Sbjct: 63 ----DVGTNASGVDGDGLIGGLIAGYDYDFGSYVLGAGIDYDIADIDLGPASLEDVLR-- 116
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ L+AG+ LIY GG+ A + G G G+
Sbjct: 117 --LKLRAGFEAGPSLIYATGGYARAGTDNL------------------GSDDGWFAGAGV 156
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y ++ ++SL+ Y D + +A + F
Sbjct: 157 EYPLSQNLSLAGEVLYHEFD-----------DFDGSGVDVDATTVQARLAYRF 198
>gi|302383863|ref|YP_003819686.1| membrane protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194491|gb|ADL02063.1| membrane protein [Brevundimonas subvibrioides ATCC 15264]
Length = 275
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 42/173 (24%), Gaps = 11/173 (6%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT---------AAK 114
+ + G G++ Q V GI + A
Sbjct: 73 GFCDGRPQGNNAGAGCRDDDDGSGEFGARAGYDFQTGPVVVGIVADFSKVNPQDSVSAFS 132
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
Y K + + G + L Y GG+ A + D +++
Sbjct: 133 TTPANYAFKREVQHLFGARFRLGLAYGRYLPYVTGGYASAQIEDKYSTSNTANSFTPTTQ 192
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
D LG G++ V + S+ Y Y +
Sbjct: 193 SQD--ADGYQLGGGIETRVTSNFSVGLEYLYTDIDADPLTVRTGPGTAPPTSN 243
>gi|188584563|ref|YP_001928008.1| outer membrane insertion C-terminal signal [Methylobacterium populi
BJ001]
gi|179348061|gb|ACB83473.1| outer membrane insertion C-terminal signal [Methylobacterium populi
BJ001]
Length = 299
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 70/284 (24%), Gaps = 88/284 (30%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A ++ + P + +D + R D + WSG YVG H
Sbjct: 4 ATLALLTSVLATPVLAADLDYGVLRGSD-------DDYLPPAPVVDWSGFYVGGHGGYSS 56
Query: 68 ETHPLADTINRKTYN----------------------SLLPNGLGIELGHNIQLEDFVFG 105
+ N G+ G N Q +D V G
Sbjct: 57 AALGFGNAFQSIVANALRYTAAEEEMKASQFLAARGIHASGTSYGVYAGVNYQFDDVVVG 116
Query: 106 INCHTTAAKDDSTFYR---------------------LKEKYFIYGDVVLKAGYSVDSLL 144
+ T + + YG + + GY + L
Sbjct: 117 LEADYTYFGKTGAAFDQITRVMTTANGYRNTVALAGEASTEIEDYGTIRGRIGYGFGNFL 176
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------------------------ 180
+ GG + + +++ A + + G
Sbjct: 177 PFVTGGLAVGRAVVNDTVAIQNYAYDEAAYKANQTGGPTTYVNHFGYQIFDQKSPPGSIP 236
Query: 181 --------------SSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ V LG GL+Y + + L Y+Y+ +
Sbjct: 237 DYPTVHGITKKVTVTGVALGGGLEYAITPNFLLRGEYQYVLFND 280
>gi|21106560|gb|AAM35363.1| membrane protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 474
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 63/262 (24%), Gaps = 68/262 (25%)
Query: 46 YQDDEYGIWSGNYVGLHISRLY-----------------------ETHPLADTINRKT-- 80
+ WSG +G ++ T AD +
Sbjct: 216 WAQSGPADWSGLSIGANVGGADPAGVSGGRFGFDTNLDGRDGDQVGTATGADAFSPGFCG 275
Query: 81 ------------YNSLLPNGLGIELGHNIQLEDFVFGINCHT---------TAAKDDSTF 119
G LG++ Q ++V+G+ +A F
Sbjct: 276 GAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDVRDSVSAFSTTPAF 335
Query: 120 YRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
Y + + + GY+ L Y G S +++ ++ G
Sbjct: 336 YTFTRQLNRTAALRGRIGYAFGTQGDYLAYITAGVARGEFDHSFASSNTANSFTSSGGD- 394
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS---------------- 220
GIGL ++ +S+ Y +
Sbjct: 395 --SADGYQAGIGLQRRLSDKVSVGVEYLFTRLQDDDTRVRVGPGTAPATNPFLRVNPAGT 452
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D+ R D + + L F
Sbjct: 453 DLRRTDTDVSTNAVRLTATYRF 474
>gi|240141692|ref|YP_002966172.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
gi|240011669|gb|ACS42895.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
Length = 299
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 71/285 (24%), Gaps = 90/285 (31%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDE-YGIWSGNYVGLHISRL 66
A ++ +V P +LA DL D + +Y WSG YVG H
Sbjct: 4 ATLALLTTVLVSP--ALAADL------DYGVLRGYDDDYPAPAPIIDWSGFYVGGHGGYS 55
Query: 67 YETHPLADTINR----------------------KTYNSLLPNGLGIELGHNIQLEDFVF 104
+ G+ G N Q ED V
Sbjct: 56 SAALGFGNAFQPIVATALRYSVVEAEMNASQLLAARSTHSGGASYGVFAGVNYQFEDVVV 115
Query: 105 GINCHTTAAKDDSTFYR---------------------LKEKYFIYGDVVLKAGYSVDSL 143
G T T K YG + + GY+ +L
Sbjct: 116 GFEADYTYFGQSGTTSDQIARYMITKDNYLRTVDLSGQASTKIQDYGTIRGRLGYAFGNL 175
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS---------------------- 181
L + GG + +++ N + G+
Sbjct: 176 LPFVTGGVAVGRATVHNTVTIQNYGYNNTIYATNQTGTTKSYIDNEGYSVFYQNNPPGSI 235
Query: 182 ----------------SVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ +G GL+Y + + L Y+Y+ +
Sbjct: 236 PAPGTVHGTTKKVTVTGIAVGGGLEYAITPNFLLRGEYQYVLFND 280
>gi|170747715|ref|YP_001753975.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170654237|gb|ACB23292.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 276
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/260 (14%), Positives = 69/260 (26%), Gaps = 60/260 (23%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL----- 89
DL A + W+G Y G++ ++ + + P +
Sbjct: 22 DLPRRAAPPPVFTPVPVFTWTGAYFGINAGYAFDASSRTNNTFAVPFPYAAPGTVASFRD 81
Query: 90 --------GIELGHNIQLED---FVFGINCHTTAAKDDSTFYRL---------------- 122
G ++G+N Q+ V G
Sbjct: 82 RSQDGFSGGAQIGYNWQITPGSGVVIGFEADAQYLDFGRNRNNAFISGAVAPGYYVTDPR 141
Query: 123 -KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+G V + GY+ D L+Y GGF +D S D +
Sbjct: 142 GLSSLDYFGTVRGRLGYAFDRTLVYATGGFAY--------GSGSADRSFGGYAGNDSFRT 193
Query: 182 SVVLGIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSNAKSDVERV------ 225
+G G++Y + + ++L Y+ + N + +
Sbjct: 194 GYAVGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLERGTRNQGALVVNAANLVPVAYS 253
Query: 226 ---DRKGNAHIASLGINMHF 242
R + G+N F
Sbjct: 254 AIGRRDDEFAVVRAGLNYKF 273
>gi|296446925|ref|ZP_06888861.1| porin [Methylosinus trichosporium OB3b]
gi|296255600|gb|EFH02691.1| porin [Methylosinus trichosporium OB3b]
Length = 429
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 14/195 (7%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA-- 112
G G+ + AD + + G+ LG++ +L F+ G +
Sbjct: 228 GPSFGVLVGTAVGDGAFADPVPMQG----AGFLGGLRLGYDFKLTPRFLVGFETDSQYRS 283
Query: 113 ---AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+S + G + GY +D +YG GG +++ + +
Sbjct: 284 DLGGGSNSHGSISGVRGGYLGTFRGRLGYVIDRWTVYGTGGLAYGHILAPRTFSGSNLIN 343
Query: 170 KNAKGRFDGHGS---SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE-RV 225
+G G+ + + +SL A Y Y + + S V
Sbjct: 344 SIPTTGVSQSYQLVPGWTVGAGVQFALAPGLSLRAEYLYTQLQHSNPTYMTSVSPYPVTV 403
Query: 226 DRKGNAHIASLGINM 240
K H +G++
Sbjct: 404 CTKSAMHGVRVGVDF 418
>gi|209966188|ref|YP_002299103.1| outer membrane protein [Rhodospirillum centenum SW]
gi|209959654|gb|ACJ00291.1| outer membrane protein [Rhodospirillum centenum SW]
Length = 231
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 64/196 (32%), Gaps = 15/196 (7%)
Query: 56 GNYVGLHISRLY----ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G YVG + + T ++ +K + + LG+ ++ GI
Sbjct: 42 GGYVGAALGYAWMKPNGTTTFSNATTQKVDRTNDGVTGAVFLGYGKTIDTLYLGIEGEIG 101
Query: 112 AAKDDSTFYRLKEKYFIYGD----VVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+ + Y + L+AG + L+YG G+ + S
Sbjct: 102 ISDQEKNSTLAGNTYNFDAGTSLGIALRAGLLATPDTLVYGRIGWQRTDLDVS---GRLG 158
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ + H + +G G+++ + ++ Y Y + + V+ + R +
Sbjct: 159 SVAGTPTMDENEHLNGWRIGGGVEHALTENVLARLEYNYTDYESYKVSYGQGGA---RTN 215
Query: 227 RKGNAHIASLGINMHF 242
+ + GI F
Sbjct: 216 AEPHESAVRAGIAYRF 231
>gi|170740663|ref|YP_001769318.1| porin [Methylobacterium sp. 4-46]
gi|168194937|gb|ACA16884.1| porin [Methylobacterium sp. 4-46]
Length = 284
Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 67/241 (27%), Gaps = 53/241 (21%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSL----------------LPNGLGIELGHNI 97
W+G Y GLH ++ T+ +N +G +G+N
Sbjct: 42 WTGFYAGLHTDYVFTERQRITTVGNTAFNQANVAALLRTPTTFAEVDGFANVGGGIGYNY 101
Query: 98 QLED---FVFGINCHTTAAKDDSTFY-----------RLKEKYFIYGDVVLKAGYSVDSL 143
Q V G+ + + K G VV +AGY+ D
Sbjct: 102 QFTPGNGLVVGVQADVSWTAIEKNRGYLSPTVPVLVSTYKHSLNYLGTVVGRAGYAFDRF 161
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV---------- 193
++G+GGF V + + GR + G G++Y +
Sbjct: 162 FVFGLGGFAFGDV-TTGANFYNGGLALAYTGRTSDVQTGYAYGGGIEYAIPADSFLAKFN 220
Query: 194 --------NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI----ASLGINMH 241
++L A Y + ++ +N G +
Sbjct: 221 VLSLLGFQTAAVTLKAEYLHYDLGRRNLLVNNTGLAGSPGSYTSRFQTEGNLVRAGFSYK 280
Query: 242 F 242
F
Sbjct: 281 F 281
>gi|323135881|ref|ZP_08070964.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
gi|322398972|gb|EFY01491.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
Length = 283
Score = 85.2 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/251 (17%), Positives = 77/251 (30%), Gaps = 41/251 (16%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY-----ETHPLADTINRKT-----YN 82
DL + W+G Y G++I + AD +
Sbjct: 21 AADLPSHKAPPAYIPPPPTFTWTGLYGGVNIGYSFNAGGAGWGYFADPLLLSGATWTANP 80
Query: 83 SLLPNGLGIELGHNIQLEDF-VFGINCHTTAAKDDSTFYRLKEKY--------------F 127
S G ++G+N Q + V G AA +S
Sbjct: 81 SAQGVIGGGQIGYNYQYSPWLVIGAEADIQAADINSQQNNWMPSNWFGGLAALNTNKYVD 140
Query: 128 IYGDVVLKAGY---SVDSLLIYGMGGFGGAYVIDSSLEKVESDN------SKNAKGRFDG 178
+G V + G S +L++YG GF YV ++ ++ +
Sbjct: 141 WFGTVRGRLGLVMPSYPNLMVYGTAGFAYGYVSNTVSVANYPFAAFPVPFAQTGQTTSGN 200
Query: 179 HGSSVVLGIGLDY--MVNYDISLSASYRYIPHHIHSVN----NSNAKSDVERVDRKGN-A 231
+ G G+++ M SL Y Y + + + +N ++ ++
Sbjct: 201 TNTGWTAGGGVEWTPMAFPAWSLKVEYLYTDLGVTNQSFFSVFTNTATNFTAANQSPTRF 260
Query: 232 HIASLGINMHF 242
H G+N HF
Sbjct: 261 HTVRAGLNWHF 271
>gi|310639322|ref|YP_003944081.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
gi|308752898|gb|ADO44042.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
Length = 261
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 78/258 (30%), Gaps = 34/258 (13%)
Query: 3 FNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLH 62
F + ++ + + ++A + + W G YVG +
Sbjct: 20 FKWISIMRYICIAAFLASTSAIAANAGGLSTPVMEPPVIMVQPTPMPAP-SWQGAYVGAN 78
Query: 63 ISRLY----ETHPLADTINRKTYNSLLPNGLGIE----LGHNIQLEDFVFGINCHTTAAK 114
++ T L + +++ + G+ G++ Q +++FG+ +
Sbjct: 79 VNYGDLSVDSTGVLETALQGAGFDTTVATADGVNYAIRGGYDWQFNNWLFGLGGEYSFGS 138
Query: 115 DDST---------FYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKV 164
D + L+AGY+ Y + G+ A +
Sbjct: 139 YDGGLSGDLVTALGTDIDLSIDSVATAYLRAGYAFSQSTAAYLLVGYTWATAEATLGGTT 198
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
S++ + A G+G+++ N S+ Y Y + +
Sbjct: 199 YSEDYEAAS-----------YGLGVEHRFNRAWSVYGEYVYTDFG----DINPTNDPTYD 243
Query: 225 VDRKGNAHIASLGINMHF 242
+ + +G+N F
Sbjct: 244 NLAEADLGQFKIGVNFRF 261
>gi|296446779|ref|ZP_06888717.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296255654|gb|EFH02743.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 312
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 44/258 (17%), Positives = 70/258 (27%), Gaps = 69/258 (26%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYN-----------------------SLLPNGLG 90
W+G YVGL+ + A T Y+ G
Sbjct: 43 WAGLYVGLNAGWAWGGTSEARTYGYSVYDWASGALGMPFGFSSPYVSGLASLQQDGFIGG 102
Query: 91 IELGHNIQLE-DFVFGINCHTTAAKDDSTFYR---------------------LKEKYFI 128
++G+N F+FG+ + + ++
Sbjct: 103 AQIGYNHVGPAGFLFGVETDFDGSTLRGSGASNGFASQVDAHGLLHLQAGRADVRAGLGW 162
Query: 129 YGDVVLKAGYSVDSLLI-YGMGGFGGAYVIDSSLE-----------KVESDNSKNAKGRF 176
G V + GY + L+ YG GG S + A G F
Sbjct: 163 LGSVRGRFGYFFNPALLFYGTGGLAYGGTFGSISTLGFHWHPQDPIGHPDNPVLPAWGSF 222
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN------------SNAKSDVER 224
D + G G ++ S+ Y V+ S A +V
Sbjct: 223 DAARVGWIAGGGFEWSFAPQWSVKTEALYYDLGSRRVSTFPSALVNPAAPSSIAVLNVAT 282
Query: 225 VDRKGNAHIASLGINMHF 242
+ + IA LG+N HF
Sbjct: 283 TRFRYDGVIARLGVNYHF 300
>gi|156739532|gb|ABU93426.1| Omp25 [Brucella suis]
gi|156739566|gb|ABU93443.1| Omp25 [Brucella melitensis]
gi|156739572|gb|ABU93446.1| Omp25 [Brucella melitensis]
gi|156739576|gb|ABU93448.1| Omp25 [Brucella melitensis]
Length = 106
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 11/109 (10%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 8 AGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLT 67
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 68 AGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 105
>gi|315122463|ref|YP_004062952.1| hypothetical protein CKC_03575 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495865|gb|ADR52464.1| hypothetical protein CKC_03575 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 294
Score = 85.2 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 86/216 (39%), Positives = 133/216 (61%), Gaps = 11/216 (5%)
Query: 37 FNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN 96
F+ NN+EY DDEYGIW G +VG++ S + K +S +GI+ G++
Sbjct: 77 FDNRCNNIEYLDDEYGIWEGIHVGINFSSQHYNQAFYYEPYNKAKSSFNKYKVGIDTGYD 136
Query: 97 IQLEDFVFGI----------NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
+ EDFV+G+ + + D + F+R+K Y IYGD + +AGYSVDS+L+Y
Sbjct: 137 LHTEDFVYGLRFSSNFSKGLEANAKLSSDQALFHRMKAGYSIYGDALFRAGYSVDSVLVY 196
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G+GG GG Y+ +S+L+K++ + S N +F G+G +VLG+G+DYM+ +IS++ SYRY
Sbjct: 197 GLGGLGGTYIGNSTLQKIDKEGSGNHATKFSGYGVGIVLGVGVDYMIWDNISVTTSYRYA 256
Query: 207 PHHIHSVNNS-NAKSDVERVDRKGNAHIASLGINMH 241
PH I N S +A ++ ++ NAHI SLG++MH
Sbjct: 257 PHSIRFNNISKDASETIKEINGTSNAHIISLGLSMH 292
>gi|126729809|ref|ZP_01745622.1| outer membrane protein, putative [Sagittula stellata E-37]
gi|126709928|gb|EBA08981.1| outer membrane protein, putative [Sagittula stellata E-37]
Length = 220
Score = 85.2 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 34/234 (14%), Positives = 59/234 (25%), Gaps = 47/234 (20%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
V ++ + ++D+ + G W+G Y GL + +
Sbjct: 33 MTVAIAALGTAASAGSLDVTPVEPAPMTPV----EVVPAAPVGNWTGGYTGLSLGGAQAS 88
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEKYFI 128
+ G+ G++ Q + V G
Sbjct: 89 ---------SGGSEESGMIYGLHGGYDYQFGNGIVLGGEAEFQGNN---DLSVNGFDVDN 136
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
+ GY + L+YG G G +S V G+G
Sbjct: 137 VSRAKARMGYDLGQALVYGTAGVSKVNTSI-------------------GEATSPVYGLG 177
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++Y V S+ A Y D+ + SL N F
Sbjct: 178 MEYKVTDKFSVGAEYLNEDFQ-----------DLGSTNTDLQQDSLSLRGNFRF 220
>gi|296446617|ref|ZP_06888558.1| porin [Methylosinus trichosporium OB3b]
gi|296255845|gb|EFH02931.1| porin [Methylosinus trichosporium OB3b]
Length = 723
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/274 (13%), Positives = 66/274 (24%), Gaps = 77/274 (28%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYE--------------------------THPLADTINRK 79
+W+G Y G ++ +N
Sbjct: 27 APRPPPPLWTGLYGGFNVGGASASSGPIVYATGPTPTGRYLTDPVQWPARARFWSPLNGS 86
Query: 80 TY-NSLLPNGLGIELGHNIQL---EDFVFGINCHTTA--------------------AKD 115
N G+++G+N + + G
Sbjct: 87 IDGNDGGAFLGGVQIGYNFRFDHLGGIIAGFEADLQGVAQGREMRGVSSVSRNILTRGDS 146
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGGAYVI-----DSSLEKVESDNS 169
G V + G VD L+YG GG V +S +
Sbjct: 147 LINTVDGGGALQFLGTVRARLGLLVDPTVLVYGTGGLAFGGVSYKFGLNSLYANAAGAPA 206
Query: 170 KNAKGRFDG--HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+NA D S G G+++M SL Y Y + +++ +
Sbjct: 207 QNASAALDNLTTRSGWTAGAGVEWMFAPSWSLKGEYLYYSLDSGATRTTSSAYPIAAASA 266
Query: 228 -------------------KGNAHIASLGINMHF 242
+ + I +G++ HF
Sbjct: 267 FGGNAGAPADWTTTSAGSPRMSGSIVRVGLDYHF 300
>gi|260426559|ref|ZP_05780538.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260421051|gb|EEX14302.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 199
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 75/232 (32%), Gaps = 38/232 (16%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
++ + P + +++ + A G W+G VG +
Sbjct: 6 LILLPFLATPALAGSLEPTPVEPAPVAPLA----PVASPVTGDWTGPSVGAQLGYG---- 57
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG 130
+ + +S G+ ++ ++V G A D
Sbjct: 58 --SVDTDGAGDDSEDGMVYGLRAFYDHDFGNWVAGAGVQYDATDIDLGDAG---DLDGIA 112
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
V + GY + ++YG GG+ A SL+ G +G G++
Sbjct: 113 RVGGRVGYDLGRTMVYGTGGYAHATTDGGSLDA--------------GSSGGYYVGAGVE 158
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V+ +++L+ Y N SD + D + A A++GIN F
Sbjct: 159 TFVSDNVTLNGEVNY-----------NEFSDFDDDDLEVGATTATVGINYRF 199
>gi|163854231|ref|YP_001642274.1| porin [Methylobacterium extorquens PA1]
gi|163665836|gb|ABY33203.1| porin [Methylobacterium extorquens PA1]
Length = 313
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 80/313 (25%), Gaps = 99/313 (31%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDE-YGIWSGNYVGLHISRL 66
A ++ +V P +LA DL D + +Y WSG YVG H
Sbjct: 9 ATLALLTTVLVSP--ALAADL------DYGVLRGYDDDYPAPAPIIDWSGFYVGGHGGYS 60
Query: 67 YETHPLADTINR----------------------KTYNSLLPNGLGIELGHNIQLEDFVF 104
+ + ++ + G +NIQL+D VF
Sbjct: 61 SASMGFTNVFSKPYSQYFRARDIETEFGISSLLSFASQRVHGITYGAFASYNIQLDDAVF 120
Query: 105 GINCHTTAAKDDSTFYRL---------------------KEKYFIYGDVVLKAGYSVDSL 143
GI T+ Y + + +G + +AGY+ S
Sbjct: 121 GIEVDYTSFSKSGMSYSEISRFVTTKNNMFETVNLRGFSRTELEDFGTIRGRAGYAFGSF 180
Query: 144 LIYGMGGFGGA-----------------------YVIDSSLEKVESDNSKNAKGRFD--- 177
L + G + V N FD
Sbjct: 181 LPFVTAGLAIGRATILDQPEVQNYGYDATAAAAYQTNPKAGAPVTHHGYANGNTAFDPSA 240
Query: 178 ---------------------GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ V LG GL+Y + + L Y+Y+ +
Sbjct: 241 PQDPQKSIPDGFYQIPAKPKSKAMAGVALGAGLEYAITPNFLLRGEYQYVLFDDFDGHKI 300
Query: 217 NAKSDVERVDRKG 229
N + K
Sbjct: 301 NVNTVRGGAAIKF 313
>gi|114798934|ref|YP_759743.1| putative outer membrane protein [Hyphomonas neptunium ATCC 15444]
gi|114739108|gb|ABI77233.1| putative outer membrane protein [Hyphomonas neptunium ATCC 15444]
Length = 292
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 68/273 (24%), Gaps = 70/273 (25%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLY-------------------------------- 67
AD+ W+G Y G+H +
Sbjct: 20 ADDLSTAAAPGAYSWTGFYAGVHAGPTWQDRSAERGLVTGSVAPDFDYDANLNEGGPSGG 79
Query: 68 ---ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ A + + + G++ G+N Q F G T +
Sbjct: 80 VAEGSPLAAIFPSEFGSSEKVGMSGGVQAGYNQQYGRFALGFEADFTGLGSNGGDDGAVQ 139
Query: 122 -------------------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
++ L+AG D L+YG GG
Sbjct: 140 GLTASNPAFGDAVFGTDLRVRSSMDYLATTRLRAGVVTDRFLVYGTGGAAVGNPEHQVDF 199
Query: 163 KVES-----------DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
D S + GR D G G ++ +++L A Y Y
Sbjct: 200 SAGLTATGGTLVGPLDRSNSFSGRKDDWKGGWTAGAGGEFAFTDNMTLKAEYLYYDLGET 259
Query: 212 SV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
V +++A + A + +N F
Sbjct: 260 HVGATSTSAPGFAAVYGFENRGQSARIALNRKF 292
>gi|319406586|emb|CBI80228.1| Hemin binding protein E [Bartonella sp. 1-1C]
Length = 305
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 38/123 (30%), Gaps = 10/123 (8%)
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ K G ++ G++ D ++ Y G A + D+ V +NA+ +
Sbjct: 193 FNHCLKEKWTGATRVRIGFAADRIMPYIAAGVSYAELQDTLSVLVSR---RNAEADEEKK 249
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G G D + + YRY V+ + +G+
Sbjct: 250 MVGYTFGGGFDIALAKSFIMRTEYRYSDFGKKKFAKGE-------VELSYKTNDFRVGVA 302
Query: 240 MHF 242
F
Sbjct: 303 YKF 305
>gi|156739536|gb|ABU93428.1| Omp25 [Brucella abortus]
Length = 105
Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 11/109 (10%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 8 AGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLT 67
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 68 AGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 105
>gi|315498453|ref|YP_004087257.1| porin [Asticcacaulis excentricus CB 48]
gi|315416465|gb|ADU13106.1| porin [Asticcacaulis excentricus CB 48]
Length = 199
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 52/195 (26%), Gaps = 27/195 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKT---YNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
SG Y+ + + T + G+ LG N Q VFG+
Sbjct: 25 SGPYIAGQGGYAKTKLEVTYSAGTTTESASDDTGNGAAGVILGFNAQSNGAVFGVETDLN 84
Query: 112 AAKDDST----FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
++ G V + G+ + L YG G G
Sbjct: 85 WNNAKDRYRVLGEEVETGIDYSGAVRARLGFVSGNTLFYGAAGVAG-----------TRA 133
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ + + GIG D+ + + YRY + V
Sbjct: 134 YVEYDGEKETETVAGWTAGIGADHAFSDRVFGRIEYRYTDFGDVEDD---------GVKA 184
Query: 228 KGNAHIASLGINMHF 242
+ LG+ M F
Sbjct: 185 ELMQQSVWLGLGMKF 199
>gi|156739546|gb|ABU93433.1| Omp25 [Brucella abortus]
Length = 109
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 11/109 (10%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 11 AGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLT 70
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 71 AGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 108
>gi|323135849|ref|ZP_08070932.1| porin [Methylocystis sp. ATCC 49242]
gi|322398940|gb|EFY01459.1| porin [Methylocystis sp. ATCC 49242]
Length = 256
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 66/214 (30%), Gaps = 36/214 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINR--KTYNSLLPNGLGIELGHNIQLED-FVFGINCHT 110
W+G Y GL++ + T+ + ++ G ++G+N QL FV G
Sbjct: 42 WTGFYAGLNLGGGWLTNGSNNAGWGWTGNNSNSGGVVGGGQIGYNYQLTPMFVVGAEADF 101
Query: 111 TAAKDDSTFYR---------------LKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFG 152
S + +G V + G + S LL+YG GGF
Sbjct: 102 QGTSIGSGGNANNTAWLLGLGWGNGGASARLNWFGTVRGRLGLTFPSMPTLLLYGTGGFA 161
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH--- 209
+ S ++ G+ G G ++M + S Y Y
Sbjct: 162 YGEI-----------ASNGGFSSWNTTGTGWTAGGGAEWMFWPNWSAKVEYLYTQLSGNN 210
Query: 210 -IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + H GIN HF
Sbjct: 211 GNNANWAGWGWNGGNNFRTNTRFHTVRAGINYHF 244
>gi|170750581|ref|YP_001756841.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170657103|gb|ACB26158.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 277
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 76/279 (27%), Gaps = 61/279 (21%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY------ETH 70
++ + DL A + W+G Y G++ + +
Sbjct: 4 LLASLAAFTALTGAASAADLPRRAAPPPVFTPVPVFTWTGAYFGINAGYAFDASDRNTGN 63
Query: 71 PLADTINRKTYNSL--------LPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTF 119
A ++ G ++G+N Q+ V G+
Sbjct: 64 TFAVPFPYAAPGTVASFRNRSQDGFSGGGQIGYNWQITPGSGVVIGVEADAQYLDFGRNR 123
Query: 120 YRL-----------------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
+G V + GY+ D L+YG GGF
Sbjct: 124 NNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLGYAFDRTLVYGTGGFAY--------G 175
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHS 212
+D S D + +G G++Y + + ++L Y+ ++
Sbjct: 176 SGSADRSFGGYAGNDSFRTGWAVGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRNT 235
Query: 213 -------VNNSNAKSDVER--VDRKGNAHIASLGINMHF 242
+N +N V R + G+N F
Sbjct: 236 RNQGAFVINAANNFPVVYSGIGRRSDEFAVVRAGLNYKF 274
>gi|156739580|gb|ABU93450.1| Omp25 [Brucella canis]
Length = 105
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 11/109 (10%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 7 AGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLT 66
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 67 AGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 104
>gi|170750246|ref|YP_001756506.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170656768|gb|ACB25823.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 287
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 70/263 (26%), Gaps = 56/263 (21%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL---------- 84
DL A + W+G Y GL + + T+ + N+
Sbjct: 23 DLPRRAAPPPVFTPVPVFTWTGFYAGLESAYTFTDRERITTVGVQPGNATNVALGRRPFA 82
Query: 85 ------LPNGLGIELGHNIQLED---FVFGINCHTTAAKD---------------DSTFY 120
+G G+N Q V GI
Sbjct: 83 TSTTQDGFANIGGTAGYNYQFTPGAGIVVGIANSIDWTDITKNRVVLGTGNVAGGPPNIS 142
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ ++ G + + GY+ D +L+YGMGG V + GR+D
Sbjct: 143 QFRQSLDWLGTLTGRVGYAFDRVLVYGMGGLAYGNVFHDA-NFYTPGGRLQFAGRYDDFK 201
Query: 181 SSVVLGIGLDYMV------------------NYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ G G+++ + I++ A Y + +V
Sbjct: 202 TGFAYGGGIEFALPTDSFLNTFALGRYIGIKYDAITVKAEYLHYDLGSQNVLVGAVPGVG 261
Query: 223 ER---VDRKGNAHIASLGINMHF 242
+ I G N F
Sbjct: 262 NGAYISRFRTEGSIVRAGFNYKF 284
>gi|156739538|gb|ABU93429.1| Omp25 [Brucella abortus]
gi|156739542|gb|ABU93431.1| Omp25 [Brucella abortus]
gi|156739562|gb|ABU93441.1| Omp25 [Brucella melitensis]
gi|156739574|gb|ABU93447.1| Omp25 [Brucella melitensis]
gi|156739596|gb|ABU93458.1| Omp25 [Brucella suis]
gi|156739600|gb|ABU93460.1| Omp25 [Brucella suis]
gi|156739604|gb|ABU93462.1| Omp25 [Brucella suis]
gi|156739616|gb|ABU93468.1| Omp25 [Brucella melitensis]
gi|156739628|gb|ABU93474.1| Omp25 [Brucella abortus]
Length = 108
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 11/109 (10%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 10 AGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLT 69
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 70 AGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 107
>gi|192293155|ref|YP_001993760.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris TIE-1]
gi|192286904|gb|ACF03285.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris TIE-1]
Length = 263
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 54/246 (21%), Gaps = 64/246 (26%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLL-------------------- 85
+ W G YVG +++ + N L+
Sbjct: 33 VETPRVINWEGFYVGGQGGYGTSDMDFSNSTSGIASNLLVNTVIENQMSVSSWPVLGKAS 92
Query: 86 --PNGLGIELGHNIQLEDFVFGINCHTTAAKDDST--------------------FYRLK 123
G G G+N Q +D V G+ +
Sbjct: 93 SHGQGWGAFAGYNAQWDDVVLGVEANYMHGSFGGGATGSMGRQIDYNNVNYRAIYTSSAA 152
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS-- 181
G L+AGY+ S L Y G +
Sbjct: 153 INVNDIGSARLRAGYAFGSFLPYAFIGASLGQADIVRTATITGTQGGVPFTPLSATQVQN 212
Query: 182 -----SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
G+G+D M+ + L A + Y+ +
Sbjct: 213 GHFIYGYAGGLGMDVMLYRGLFLRAEWEYLKFA---------------APIDTSVSTVRA 257
Query: 237 GINMHF 242
G+ F
Sbjct: 258 GLGYKF 263
>gi|220923245|ref|YP_002498547.1| porin [Methylobacterium nodulans ORS 2060]
gi|219947852|gb|ACL58244.1| porin [Methylobacterium nodulans ORS 2060]
Length = 285
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 67/271 (24%), Gaps = 73/271 (26%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI-----------------N 77
DL + W+G Y G + + T+
Sbjct: 22 DLPRRVAPPPVFTPVPVFTWTGFYAGFNAGYGFSTNDNNTPTVLGVGPATGLVFAPTVIA 81
Query: 78 RKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFYRLKEK--------- 125
+ N+ G ++G+N Q V G+ A R
Sbjct: 82 FQNRNNNDGFVGGGQVGYNYQFTPGSGVVIGLEADAQFADFGRNRNRFLATGPIAAQTVF 141
Query: 126 -------YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+G V + GY+ D L+Y GGF D
Sbjct: 142 NPAGISGLDWFGTVRGRLGYAFDRTLVYATGGFAYGSGGGRDFGLPNR----------DD 191
Query: 179 HGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIH-----SVNNSNAKSDVE 223
+ G G++Y + + +++ Y+ + +NA + +
Sbjct: 192 FQTGWTAGGGVEYALPTDSFLNFFKSNAVTVKVEGLYVNLERERNRSGAFAVNNAGTLIT 251
Query: 224 RVD------------RKGNAHIASLGINMHF 242
R + G+N F
Sbjct: 252 TASPGVVVVSGANLRRDTEFAVVRAGLNYKF 282
>gi|21111442|gb|AAM39773.1| membrane protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66572140|gb|AAY47550.1| membrane protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 377
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 65/262 (24%), Gaps = 68/262 (25%)
Query: 46 YQDDEYGIWSGNYVGLHISRLY-----------------------ETHPLADTINRKT-- 80
+ WSG +G ++ T AD +
Sbjct: 119 WAQSGPADWSGFSLGANVGGADPAGVSGGRFGFDTNLDGRDGDQVSTATGADAFSPGFCG 178
Query: 81 ------------YNSLLPNGLGIELGHNIQLEDFVFGINCHT---------TAAKDDSTF 119
G+ G++ Q+ D+V+G+ +A
Sbjct: 179 GAAAGRTPASGCSKDKGGAEYGVRAGYDWQVGDWVYGVVAEYTRNDLRDSVSAFSTTPAL 238
Query: 120 YRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
Y + + + GY+ L Y G S +++ + G
Sbjct: 239 YTFTRQLNRTAALRGRVGYAFGAQGDYLAYVTAGVARGEFDHSFASSNTANSFTGSGGD- 297
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS---------------- 220
+ GIGL ++ +S+ Y +
Sbjct: 298 --SANGYQAGIGLQRRLSDHVSVGVEYLFTRLQDEDTRVRVGPGTAPATNPFLRVNPAGT 355
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D+ R D +++ L + F
Sbjct: 356 DLRRTDTDFSSNAIRLTASYRF 377
>gi|156739612|gb|ABU93466.1| Omp25 [Brucella canis]
Length = 104
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 11/109 (10%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 6 AGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLT 65
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 66 AGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 103
>gi|239832569|ref|ZP_04680898.1| outer surface protein [Ochrobactrum intermedium LMG 3301]
gi|239824836|gb|EEQ96404.1| outer surface protein [Ochrobactrum intermedium LMG 3301]
Length = 290
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 81/292 (27%), Gaps = 66/292 (22%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
A+ V + + + A D+ I+ E N SG Y+ +
Sbjct: 9 ISAIAIVAVSLMAGSSAAFAADIIAEPVIEPMPEPVNA-----------SGWYIRGDLGY 57
Query: 66 LYETHPLA----------------DTINRKTYNSLLPNGLGIELGHNIQ--------LED 101
+++ DT+ +N G+ +G+ L+
Sbjct: 58 NFKSSTGGEWNFWNQFDPPYRGIDDTLRYDDFNLKAGATYGVGVGYRFTDTFRADATLDY 117
Query: 102 FVFGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGM 148
F GIN T + K +++ ++ + Y
Sbjct: 118 FRAGINGRTPCPSYVKSGKGLNPVEDNCNYEDSSTANIWTAMANAYVDLPRTGPVTPYLG 177
Query: 149 GGFGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
G G AYV + E + KG D ++ L G+ Y + + L YRY
Sbjct: 178 AGLGAAYVRYDDWKSHEVCAGCTYSSEKGGLDSWRFAMALMAGVSYDLTEQLKLDVGYRY 237
Query: 206 I-------------PHHIHSVNNSNAKSDVERV--DRKGNAHIASLGINMHF 242
+ + + N+ D N H G+ F
Sbjct: 238 MRINGGKAYGYDADDRNTNPYGNAEGPGATGTQAKDNGFNMHTIRAGLRYEF 289
>gi|220925103|ref|YP_002500405.1| porin [Methylobacterium nodulans ORS 2060]
gi|219949710|gb|ACL60102.1| porin [Methylobacterium nodulans ORS 2060]
Length = 287
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 67/273 (24%), Gaps = 73/273 (26%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI---------------- 76
DL + W+G Y G + + T+
Sbjct: 22 AADLPRRVAPPPVFTPVPVFTWTGFYAGFNAGYGFSTNDNNTPTVLGVGPATGLVFAPTV 81
Query: 77 -NRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFYRLKEK------- 125
+ N+ G ++G+N Q V G+ A R
Sbjct: 82 IAFQNRNNNDGFVGGGQVGYNYQFTPGSGVVIGLEADAQFADFGRNRNRFLATGPIAAQT 141
Query: 126 ---------YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+G V + GY+ D L+Y GGF
Sbjct: 142 VFNPAGISGLDWFGTVRGRLGYAFDRTLVYATGGFAYGSGGGRDFGLPNR---------- 191
Query: 177 DGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIH-----SVNNSNAKSD 221
D + G G++Y + + +++ Y+ + +NA +
Sbjct: 192 DDFQTGWTAGGGVEYALPTDSFLNFFKSNAVTVKVEGLYVNLERERNRSGAFAVNNAGTL 251
Query: 222 VERVD------------RKGNAHIASLGINMHF 242
+ R + G+N F
Sbjct: 252 ITTASPGVVVVSGANLRRDTEFAVVRAGLNYKF 284
>gi|319406881|emb|CBI80516.1| putative Hemin binding protein b [Bartonella sp. 1-1C]
Length = 379
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 42/122 (34%), Gaps = 12/122 (9%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID----SSLEKVESDNSKNAKGRFDGHG 180
K +G ++ G SV ++ Y GG A V S + + + +
Sbjct: 266 KRKWFGATRIRLGLSVGRVMPYIAGGVAYAKVQGIFKKSIKIGISKETVPLSSFDSEEIM 325
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ LG G D+ V I L A YRY + K NA+ +G+
Sbjct: 326 TGYTLGGGFDFAVTDRILLRAEYRYSDFGAKEFKKVDLK--------DYNANDFRIGLAY 377
Query: 241 HF 242
F
Sbjct: 378 KF 379
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 31/120 (25%), Gaps = 21/120 (17%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
L V L + + A D P L + W G Y G I
Sbjct: 3 VKYLIAVPVLIVSLSVGVQASD--TPTPSGLK--------LISAPFYSWGGFYFGGQIGS 52
Query: 66 LYETHPLADTI----------NRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK 114
+ L +R + G G N + + FV G++ +
Sbjct: 53 FSSSTTLQYNTLDETKKLNLSSRDFTSEFSGGTGGFYAGVNFEYGNRFVLGVDTDIVFSN 112
>gi|170747833|ref|YP_001754093.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170654355|gb|ACB23410.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 276
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 73/261 (27%), Gaps = 59/261 (22%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD------------TINRKT 80
DL A + W+G Y G++ ++ T +
Sbjct: 21 AADLPRRAAPPPVFTPVPVFTWTGAYFGINAGYAFDASSNNTNSFGVPAPYGNGTTAFFS 80
Query: 81 YNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFYRL--------------- 122
+ G ++G+N Q V G+ +
Sbjct: 81 QRNQEGFTGGGQVGYNFQFTPGSGIVVGVEADAQYLDFGRSRNNAFLVGPLAPGYYVTDP 140
Query: 123 --KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+G V + GY+ D +L YG GGF +D S D
Sbjct: 141 RGLSSLDFFGTVRGRIGYAFDRVLFYGTGGFAY--------GSGSADRSFGGFAGNDSFR 192
Query: 181 SSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHS-------VNNSNAKSDVE 223
+ +G G++Y + + ++L Y+ ++ +N +N V
Sbjct: 193 TGYAVGGGIEYALPTDSFLNFFRSNAVTLKVEGLYVNLDRNTRNQGAFVINAANNFPVVY 252
Query: 224 R--VDRKGNAHIASLGINMHF 242
R + G+N F
Sbjct: 253 NNIGRRDDEFAVIRAGLNYKF 273
>gi|254564200|ref|YP_003071295.1| outer-membrane immunogenic protein [Methylobacterium extorquens
DM4]
gi|254271478|emb|CAX27493.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens DM4]
Length = 299
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 59/239 (24%), Gaps = 81/239 (33%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYN----------------------SLLPNGLG 90
WSG YVG H + N G
Sbjct: 42 DWSGFYVGGHGGYSSAALGFGNAFQPIVANALRNTVAEIEMGASHYLAARATHSGGASYG 101
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDSTFYR---------------------LKEKYFIY 129
+ G N Q ED V GI T T + K Y
Sbjct: 102 VFAGINYQFEDVVAGIEADYTYFGRSGTAFDQIARYSITKDNYLTTVDLTGQASTKIQDY 161
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS-------- 181
G + + GY+ + L + GG + V++ +A + G+
Sbjct: 162 GTIRGRLGYAFGNFLPFFTGGLAVGRATVNDTVTVQNYAYNSATYASNQTGTTRSYINNY 221
Query: 182 ------------------------------SVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ +G GL+Y + + L Y+Y+ +
Sbjct: 222 GYSAFYQNSPPDSIPAPGTVYGTTKKVTVAGIAVGGGLEYAITPNFLLRGEYQYVLFND 280
>gi|192292069|ref|YP_001992674.1| TonB-dependent heme/hemoglobin receptor family protein
[Rhodopseudomonas palustris TIE-1]
gi|192285818|gb|ACF02199.1| TonB-dependent heme/hemoglobin receptor family protein
[Rhodopseudomonas palustris TIE-1]
Length = 1186
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/266 (12%), Positives = 71/266 (26%), Gaps = 60/266 (22%)
Query: 37 FNEADNNVEYQDDEYGIWSGNYVGLHISRLYET----------HPLADTINRKTYNSLLP 86
+ + WSG + G++ + + N +
Sbjct: 921 TPGSLTRLFAPSTAVADWSGFHAGVNTAYNSAKFGGAMTALDGSADSHAANEAPNQQVGA 980
Query: 87 NGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRL----------------------- 122
G+ G++ Q + F+ GI + +
Sbjct: 981 LSFGLHAGYDYQFANRFIVGIEADIAKTEIGAPQVTFAAEGVACNCANNLARMRQFEAVQ 1040
Query: 123 KEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD---------NSKNA 172
+ + V + GY+V D L+++ GG +S + +
Sbjct: 1041 QSEIKWLSTVRGRLGYAVNDRLMLFASGGVAFMRQDESRTQYRAVNSGNFSWPTTTVAAF 1100
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV---------- 222
V+G G ++ V S+ A Y ++A++ V
Sbjct: 1101 TEDSSRTRVGYVIGGGGEFAVGGAWSIKAEYLLARFTGEDFTFADARAGVLPGNFVTPAT 1160
Query: 223 ------ERVDRKGNAHIASLGINMHF 242
++ + + +G+N F
Sbjct: 1161 YATSNGRKLSSNVDIPMVRVGVNYRF 1186
>gi|170750637|ref|YP_001756897.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170657159|gb|ACB26214.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 278
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 73/263 (27%), Gaps = 61/263 (23%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY------ETHPLADTINRKTYNSL-- 84
DL A + W+G Y G++ + + A ++
Sbjct: 21 AADLPRRAAPPPVFTPVPVFTWTGAYFGINAGYAFDASDRNTGNTFAVPFPYAAPGTVAS 80
Query: 85 ------LPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFYRL------------- 122
G ++G+N Q+ V G+
Sbjct: 81 FRNRSQDGFSGGGQIGYNWQITPGSGVVIGVEADAQYLDFGRNRNNAFVSGAVAPGYYLT 140
Query: 123 ----KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+G V + GY+ D L+YG GGF +D S D
Sbjct: 141 DPRGLSSLDFFGTVRGRLGYAFDRTLVYGTGGFAY--------GSGSADRSFGGYAGNDS 192
Query: 179 HGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHS-------VNNSNAKSD 221
+ +G G++Y + + ++L Y+ ++ +N +N
Sbjct: 193 FRTGWAVGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRNTRNQGAFVINAANNFPV 252
Query: 222 VER--VDRKGNAHIASLGINMHF 242
V R + G+N F
Sbjct: 253 VYSGIGRRSDEFAVVRAGLNYKF 275
>gi|156739534|gb|ABU93427.1| Omp25 [Brucella suis]
gi|156739618|gb|ABU93469.1| Omp25 [Brucella melitensis]
Length = 98
Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 11/108 (10%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 1 GAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLTA 60
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 61 GIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 97
>gi|170751779|ref|YP_001758039.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170658301|gb|ACB27356.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 279
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 72/263 (27%), Gaps = 61/263 (23%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY------ETHPLADTINRKTYNSL-- 84
DL A + W+G Y G++ + + A ++
Sbjct: 22 AADLPRRAAPPPVFTPVPVFTWTGAYFGINAGYAFDASDRNTGNTFAVPFPYAAPGTVAS 81
Query: 85 ------LPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFYRL------------- 122
G ++G+N Q+ V G+
Sbjct: 82 FRNRSQDGFSGGGQIGYNWQITPGSGVVIGVEADAQYLDFGRNRNNAFVSGAVAPGYYLT 141
Query: 123 ----KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+G V + GY+ D L+YG GGF +D S D
Sbjct: 142 DPRGLSSLDFFGTVRGRLGYAFDRTLVYGTGGFAY--------GSGSADRSFGGYAGNDS 193
Query: 179 HGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHS-------VNNSNAKSD 221
+ G G++Y + + ++L Y+ ++ +N +N
Sbjct: 194 FRTGWAAGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRNTRNQGAFVINAANNFPV 253
Query: 222 VER--VDRKGNAHIASLGINMHF 242
V R + G+N F
Sbjct: 254 VYSGVGRRDDQFAVVRAGLNYKF 276
>gi|296445166|ref|ZP_06887126.1| hypothetical protein MettrDRAFT_0842 [Methylosinus trichosporium
OB3b]
gi|296257340|gb|EFH04407.1| hypothetical protein MettrDRAFT_0842 [Methylosinus trichosporium
OB3b]
Length = 467
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 57/197 (28%), Gaps = 22/197 (11%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G ++G H + + L G LG++ Q V G+ +
Sbjct: 285 WTGAHIGAHGGYAFGSTKLTSGSWTGDGVGGAGGVGGALLGYDYQWGRSVLGVEIDGSGG 344
Query: 114 KDDST--------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
ST + Y + +AG S L++G G+ Y ++
Sbjct: 345 GARSTASVTLRRFSANAQIAYDWDYSIRARAGRLFGSTLLFGTVGWTQTYGRLTTAGL-- 402
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
S V LG G++ M+ + Y + + A +
Sbjct: 403 ------GGIETSHLFSGVQLGGGVETMLTTHLGARLEYLHSFYDK------YAGVLGSSI 450
Query: 226 DRKGNAHIASLGINMHF 242
D + + F
Sbjct: 451 DARPTTGKTRAAVIYKF 467
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/205 (12%), Positives = 61/205 (29%), Gaps = 21/205 (10%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHN 96
+ + +W+G +VG I + PLA + G+ G +
Sbjct: 70 PLVGVDAAHAALSAPLWTGFHVGATIGSGWAITPLAIPNAATFSGVGMSGVAGGVTAGFD 129
Query: 97 IQLEDFVFGINCHTTAAKDDS--TFYRLKEKYFIYGDVVLKA-GYSVDSLLIYGMGGFGG 153
+ V GI + + + + + + G + + L+Y G
Sbjct: 130 YRFGSVVAGIAADGNLKSTSAYLSGVDVTFREAASWALRGRLGGLASEDTLVYATAGVTQ 189
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
A + D + + G+G++ + + A Y +
Sbjct: 190 AITKLTYPTGD----------SDDVRYTGAIFGVGVETRLAAGLYGRAEYLQSLFGQRNF 239
Query: 214 NNSNAKSDVERVDRKGNAHIASLGI 238
+ R + + + +A +G+
Sbjct: 240 DGG-------RYNARLESGVARVGL 257
>gi|218530922|ref|YP_002421738.1| porin [Methylobacterium chloromethanicum CM4]
gi|218523225|gb|ACK83810.1| porin [Methylobacterium chloromethanicum CM4]
Length = 285
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 63/242 (26%), Gaps = 53/242 (21%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSL----------------LPNGLGIELGHNI 97
W+G Y GLH + +P T + + + +G G+N
Sbjct: 41 WTGFYAGLHTGYAFTDNPNIQTRGNDPFTASNVTLARRPASLKSEVDGFSRIGGGFGYNH 100
Query: 98 QL---EDFVFGINCHTTAAKDD-------------STFYRLKEKYFIYGDVVLKAGYSVD 141
Q FV G+ T D + G V K GY+ D
Sbjct: 101 QFTPGGGFVAGLAFDATWLDLDKRTGFYGAPNPTIGNASVYTQSLDFLGTVNGKLGYAFD 160
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKN-AKGRFDGHGSSVVLGIGLDYM-------- 192
+YG GG +V + G + G G++Y
Sbjct: 161 RFFVYGTGGLAFGHVSYGADFFNPGATVLQYTGGGRKIFETGYNYGGGIEYAIPVDSFLN 220
Query: 193 ---------VNYDISLSASYRYIPHHIHSV---NNSNAKSDVERVDRKGNAHIASLGINM 240
+ D+++ A Y +V + + G N
Sbjct: 221 YFSVGRWLGIKSDVTIKAEYIRYDLGSRNVLINQTAPVPPGSYTARFATEGSLIRAGFNY 280
Query: 241 HF 242
F
Sbjct: 281 KF 282
>gi|170749780|ref|YP_001756040.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170656302|gb|ACB25357.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 299
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 74/279 (26%), Gaps = 75/279 (26%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD-------------------- 74
DL A + W+G Y G++ ++ +
Sbjct: 22 DLPRRAAPPPVFTPVPVFTWTGAYFGINAGYAFDASSNSTRGFVQTPGNPVALVPGGLVP 81
Query: 75 --------TINRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTF---- 119
+ + +S G ++G+N QL V G
Sbjct: 82 YQALLPNGSSLIYSNDSREGFSGGGQIGYNWQLTPGSGAVIGFEADAQYLDFGRRARFAT 141
Query: 120 ------------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+G V + GY+ D L+Y GGF A + +
Sbjct: 142 NAAAINPGFIPVNGTLNTIDFFGTVRGRLGYAFDRTLVYATGGFAYA----TGTDDGARV 197
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHS----- 212
+N GR + + +G G++Y + + ++L Y+ ++
Sbjct: 198 GLQNFAGRRNDFKTGWTVGGGVEYALPTDSFLNFFRSSAVTLKVEGLYVNLDNNNGRAQA 257
Query: 213 ---------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V S + + G+N F
Sbjct: 258 PLVGAAISPVGLVPVYSLAGASRNENAFAVVRAGLNYKF 296
>gi|218508536|ref|ZP_03506414.1| outer membrane protein [Rhizobium etli Brasil 5]
Length = 144
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 13/145 (8%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+I + + A D +D EA + G W G Y+G + +
Sbjct: 13 FAIAGVSVAQAAD-----AVDQVPEAPVAQDAPVKPAGNWEGFYLGGAGTY--------N 59
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
+ + G + G+N Q V+G+ + DD + +K KY G V
Sbjct: 60 MGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRG 119
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDS 159
+ GY ++ L+YG G + S
Sbjct: 120 RVGYDMNPFLLYGTAGLALGNIKVS 144
>gi|254510731|ref|ZP_05122798.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221534442|gb|EEE37430.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 228
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 57/199 (28%), Gaps = 40/199 (20%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
G W+G Y G I D + GI LG++ L D+V
Sbjct: 69 PALAQSSGNWTGFYGGAQIGYA-------DIDTNVSGVDGDGLIGGIILGYDYDLGDWVV 121
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEK 163
G + D + + +AGY V+ L+YG G+ A +
Sbjct: 122 GGGFDYDWSDVDLSSA---ATVESVWRIKARAGYKVNPQGLLYGTAGYADADTDNL---- 174
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
G + +G G + +V +IS+ Y D
Sbjct: 175 --------------GSDNGWFIGAGYEQIVAPNISVGGELLYHEFD-----------DFN 209
Query: 224 RVDRKGNAHIASLGINMHF 242
+A + + F
Sbjct: 210 STGVDVDATTLQVRVAYRF 228
>gi|39936343|ref|NP_948619.1| heme receptor [Rhodopseudomonas palustris CGA009]
gi|39650198|emb|CAE28721.1| possible heme receptor [Rhodopseudomonas palustris CGA009]
Length = 1191
Score = 82.2 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/266 (12%), Positives = 68/266 (25%), Gaps = 60/266 (22%)
Query: 37 FNEADNNVEYQDDEYGIWSGNYVGLHISRLYET----------HPLADTINRKTYNSLLP 86
+ + WSG + G++ + N +
Sbjct: 926 TPGSLTRLFAPSAAVANWSGFHAGVNTAYNSAKFGGAMTALDGSADGHAANEAPNQQVGA 985
Query: 87 NGLGIELGHNIQL-EDFVFGINCHTTAAKDDSTFYRL----------------------- 122
G+ G++ Q F+ GI ++
Sbjct: 986 LSFGLHAGYDYQFASRFIVGIEADVAKTDIGASQVTFASEGVACNCANNLARMRQLEAVQ 1045
Query: 123 KEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD---------NSKNA 172
+ + V + GY+V D L+++ GG +S + +
Sbjct: 1046 QSEIKWLSTVRGRLGYAVNDRLMLFASGGVAFMRQDESRTQYRAVNSGNFSWPTTTVAAF 1105
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV---------- 222
V+G G ++ V S+ A Y ++A++ V
Sbjct: 1106 TEDSSRTRVGYVIGGGGEFAVGGAWSIKAEYLLARFTGEDFTFADARAGVLPGNFVTPAT 1165
Query: 223 ------ERVDRKGNAHIASLGINMHF 242
++ + + +G N F
Sbjct: 1166 YATSSGRKLSSNVDIPMVRVGFNYRF 1191
>gi|319403669|emb|CBI77254.1| Hemin binding protein E [Bartonella rochalimae ATCC BAA-1498]
Length = 306
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 10/126 (7%)
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ K G ++ G++ D ++ Y G + D+ V +NA+
Sbjct: 191 GIVFNHCLKEKWAGATRVRIGFAADRIMPYIAAGVSYTELQDTLSVLVSR---RNAEVDE 247
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ G G D + + YRY V+ + +
Sbjct: 248 EKKMVGYTFGGGFDIAIAKSFIMRTEYRYSDFGKKKFAKGE-------VELSYKTNDFRV 300
Query: 237 GINMHF 242
G+ F
Sbjct: 301 GVAYKF 306
>gi|163852164|ref|YP_001640207.1| porin [Methylobacterium extorquens PA1]
gi|240139496|ref|YP_002963971.1| putative outer membrane protein [Methylobacterium extorquens AM1]
gi|254561910|ref|YP_003069005.1| outer membrane protein [Methylobacterium extorquens DM4]
gi|163663769|gb|ABY31136.1| porin [Methylobacterium extorquens PA1]
gi|240009468|gb|ACS40694.1| putative outer membrane protein [Methylobacterium extorquens AM1]
gi|254269188|emb|CAX25154.1| putative outer membrane protein [Methylobacterium extorquens DM4]
Length = 285
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 64/242 (26%), Gaps = 53/242 (21%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSL----------------LPNGLGIELGHNI 97
W+G Y GLH + +P T + + + +G G+N
Sbjct: 41 WTGFYAGLHTGYAFTDNPNIQTRGNDPFTASNVTLARRPASLKSEVDGFSRIGGGFGYNH 100
Query: 98 QL---EDFVFGINCHTTAAKDD-------------STFYRLKEKYFIYGDVVLKAGYSVD 141
Q FV G+ T D + G V K GY+ D
Sbjct: 101 QFTPGGGFVAGLAFDATWLDLDKRTGFYGAPNPTIGNASVYTQSLDFLGTVNGKLGYAFD 160
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKN-AKGRFDGHGSSVVLGIGLDYM-------- 192
+YG GG +V + G + G G++Y
Sbjct: 161 RFFVYGTGGLAFGHVSYGADFFNPGATVLQYTGGGRKIFETGYNYGGGIEYAIPVDSFLN 220
Query: 193 ---------VNYDISLSASYRYIPHHIHSV---NNSNAKSDVERVDRKGNAHIASLGINM 240
+ D+++ A Y +V + + + G N
Sbjct: 221 YFSVGRWLGIKSDVTIKAEYIRYDLGSRNVLINQTAPVPAGSYTARFATEGSLIRAGFNY 280
Query: 241 HF 242
F
Sbjct: 281 KF 282
>gi|149184388|ref|ZP_01862706.1| outer membrane protein-like protein [Erythrobacter sp. SD-21]
gi|148831708|gb|EDL50141.1| outer membrane protein-like protein [Erythrobacter sp. SD-21]
Length = 200
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 60/184 (32%), Gaps = 16/184 (8%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
+ N S+ G+ G++ V G+ + ++ + +
Sbjct: 24 AGSTSDNDTNANDDQSIDGLAYGVGAGYDFDAGGVVLGLEAEYVGSTAETEYDMGDFEDI 83
Query: 128 IYGDVV--------LKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
G+V + G + D LL+Y GG+ ++ +N + D
Sbjct: 84 GVGNVETGRDLYLGARVGVKANDDLLVYAKGGY-------TNATYNFRNNDGTNEYEVDL 136
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+G GL+Y ++ + YRY + ++ DV D + H G
Sbjct: 137 DTDGFRVGGGLEYALSGNTFAKVEYRYSNYSDAELDFEGDAPDVAVPDIDLDRHQVMAGF 196
Query: 239 NMHF 242
M F
Sbjct: 197 GMRF 200
>gi|75677151|ref|YP_319572.1| hypothetical protein Nwi_2970 [Nitrobacter winogradskyi Nb-255]
gi|74422021|gb|ABA06220.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 276
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 74/292 (25%), Gaps = 78/292 (26%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+ + + + A D+ D + +W G Y+G S
Sbjct: 4 LLLAAVICGAAHGAYAADM----PDDFPFLRGSQPPSLSTVRTVWQGFYIGGQASYGSAD 59
Query: 70 HPLADTINR----------------------KTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
++ +S +G G LG+N+Q+ED VFG+
Sbjct: 60 MDFKNSGKDLLERLLNHVDVESQFNLSSWPLGGTSSNRNSGFGGFLGYNLQMEDVVFGVE 119
Query: 108 CHTTAAKDDSTF---------------------YRLKEKYFIYGDVVLKAGYSVDSLLIY 146
+ T +K + +G + ++AGYS+ S L Y
Sbjct: 120 ANYTHSKFLGASSGSQGRSFSYPADYRTSAFVQSNASMQIMDFGSLRVRAGYSLGSFLPY 179
Query: 147 GMGGFGGAYVIDSSLE----------------KVESDNSKNAKGRFDGHGSSVVLGIGLD 190
GG + + G+G+D
Sbjct: 180 AFGGVAMGQANIRRNASYNLHYQYVGTQIPPLPNLAGGGSLSDNANAHFIYGYAAGLGID 239
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
M+ + L A + ++ + G F
Sbjct: 240 MMIVDGLFLRAEWEFLRF---------------TAPVDTIVNTVRAGAGYRF 276
>gi|316935831|ref|YP_004110813.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris DX-1]
gi|315603545|gb|ADU46080.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris DX-1]
Length = 263
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 61/277 (22%), Gaps = 66/277 (23%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+ + +A Y D VE W G YVG +
Sbjct: 4 VVVAATVGVMAQTAYAADMPDYGPLRGALVETA--RVVNWEGFYVGGQAGYGTSDMNFTN 61
Query: 75 TINRKTYNSLL----------------------PNGLGIELGHNIQLEDFVFGINCHTTA 112
+ + N L G G G+N Q +D V G+ +
Sbjct: 62 STSDIASNLLANTVIESQMGVSSWPVLGKTSSHGQGWGAFAGYNAQWDDVVLGVEANYMH 121
Query: 113 AKDDST--------------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+ G L+AGY+ S L Y G
Sbjct: 122 GSFGGSAIGSMGRQITYNNVNYSATYTSSAAINVNDIGSARLRAGYAFGSFLPYAFIGAS 181
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGS-------SVVLGIGLDYMVNYDISLSASYRY 205
+ + G+G+D M+ + L A + Y
Sbjct: 182 LGQADIVRTATITGTQGGSTVMPLSATRVQNGHFIYGYAGGLGMDMMLYRGLFLRAEWEY 241
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + G+ F
Sbjct: 242 LKFA---------------APVDTSVSTVRAGLGYKF 263
>gi|312115597|ref|YP_004013193.1| hypothetical protein Rvan_2888 [Rhodomicrobium vannielii ATCC
17100]
gi|311220726|gb|ADP72094.1| hypothetical protein Rvan_2888 [Rhodomicrobium vannielii ATCC
17100]
Length = 254
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 83/257 (32%), Gaps = 36/257 (14%)
Query: 4 NGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHI 63
N V + + +LA DLY K + E W+G ++GL +
Sbjct: 2 NKTLIATASVAALLAMGGSALAGDLYA--KGGYKDAPVVVAEPT------WTGFHLGLGV 53
Query: 64 SRLYETHPLA-------DTINRKTYNSLLPNGLGIEL----GHNIQLEDFVFGINCHTTA 112
H + ++ +G G+ G++ Q +FV GI +
Sbjct: 54 GGAAVNHEIDAGLYDVRSGESKSIAGIDGISGTGVFGTVEVGYDRQYGNFVGGIFFNYDF 113
Query: 113 AKDDSTFYRL------KEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVE 165
D ST L K V + GY V+ S L Y +GG+ + S
Sbjct: 114 GDDISTDVSLLGHDLASVKQTDSWTVGGRLGYLVNASTLAYVLGGYTESTFELSV----- 168
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER- 224
A D S +G GL+ + +SL YRY ++ +
Sbjct: 169 ----PVANFSTDDTFSGWTVGGGLETKLTSSLSLKGEYRYTEFDTNTYKTGPLFCHIGAY 224
Query: 225 VDRKGNAHIASLGINMH 241
D + A L ++
Sbjct: 225 ADIDTSVQTARLVLSYK 241
>gi|220922127|ref|YP_002497428.1| porin [Methylobacterium nodulans ORS 2060]
gi|219946733|gb|ACL57125.1| porin [Methylobacterium nodulans ORS 2060]
Length = 284
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 69/241 (28%), Gaps = 53/241 (21%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG----------------LGIELGHNI 97
W+G Y GLH ++ T+ N+ G +G G+N
Sbjct: 42 WTGFYAGLHTDYVFTDRTRITTVGNTAVNAAAVAGLVRAPRIFTEVDGFANIGGGFGYNY 101
Query: 98 QLED---FVFGINCHTTAAKDDST-----------FYRLKEKYFIYGDVVLKAGYSVDSL 143
Q V G+ + ++ G +V +AGY+ D
Sbjct: 102 QFTPGSGVVVGVQADWAWTDLEKNRGYLSPTVPVFGSAYRQGLGWLGTLVGRAGYAFDRF 161
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD------- 196
+YG+GG V + G+ + G G++Y + D
Sbjct: 162 FVYGLGGLAYGDV-TTGATFFNPGGVVAYTGQITDFRTGFAYGGGIEYAIPDDSFLARLN 220
Query: 197 -----------ISLSASYRYIPHHIHSVNNSN----AKSDVERVDRKGNAHIASLGINMH 241
+++ A Y + +V +N + ++ G N
Sbjct: 221 VLSLIGVQSAAVTIKAEYLHYDLGSRNVLINNTGLAGSPGSFTSRFRTEGNLVRAGFNYK 280
Query: 242 F 242
F
Sbjct: 281 F 281
>gi|310816896|ref|YP_003964860.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
gi|308755631|gb|ADO43560.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
Length = 241
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/205 (14%), Positives = 59/205 (28%), Gaps = 29/205 (14%)
Query: 55 SGNYVGLHISRLYE-------THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
+G YVG + + P + L I G+ +VFG
Sbjct: 49 TGAYVGASLGYTFSEDDRVGVHTPAGTFLGDIGEFELAGPSAAIFGGYRWNSGKWVFGPE 108
Query: 108 C---------HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGGAYVI 157
+ A ++ + GY V L+YG G+
Sbjct: 109 VSVRFGDVSDDISYAGPIPAASTGTKELNWEAALRATLGYEVTPTTLVYGFLGYSAVEYD 168
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ D + + G+G+++ +N ++ Y Y + ++ S
Sbjct: 169 YVLNGAITLD--------ETVSQNGLTAGLGVEHALNDTWAVRGLYVYNDYDRENLTGSG 220
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
+ + H ++G+ F
Sbjct: 221 GRYTTDTT----QLHTVNVGLVYSF 241
>gi|163736518|ref|ZP_02143937.1| hypothetical protein RGBS107_15341 [Phaeobacter gallaeciensis
BS107]
gi|161390388|gb|EDQ14738.1| hypothetical protein RGBS107_15341 [Phaeobacter gallaeciensis
BS107]
Length = 194
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 57/220 (25%), Gaps = 35/220 (15%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEY------GIWSGNYVGLHISRLYETHP 71
+V ++A L P E G W+G Y+G I +L
Sbjct: 4 IVSMAAIAAALSTPAFAGNLEEPVVAPAPTAPPVVVANDGGDWTGAYIGGQIGQLDADTS 63
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
+ + +Y G+ G+N FV G A D + G
Sbjct: 64 NGLSGDDVSY--------GVHAGYNYDFGRFVLGGEIDYDATDVDLGGGAATVDSVMRGK 115
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
V GY +L Y GG G + GIG+ Y
Sbjct: 116 VKA--GYDFGPVLAYVTGGVAQVDTSV-------------------GDETGEFYGIGVAY 154
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
V ++ + +A + +
Sbjct: 155 RVTDQWTVGGEVLEHDFDNLGSSGISADATTVSLRASYQF 194
>gi|218461155|ref|ZP_03501246.1| outer membrane protein [Rhizobium etli Kim 5]
Length = 168
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 48/149 (32%), Gaps = 19/149 (12%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
EA + G W G Y+G + + + + G + G+N
Sbjct: 31 PEAPVAQDAPVKPAGNWEGFYLGGAGTY--------NMGDFGSDRHTYGFGGQVFTGYNW 82
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
Q V+G+ + DD + ++ KY G V + GY ++ L+YG G +
Sbjct: 83 QAGQIVYGVESDLGYSGDDVSSGGVENKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNIK 142
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
S + +G
Sbjct: 143 VS-----------DDTSDESKTAYGYTVG 160
>gi|170742457|ref|YP_001771112.1| porin [Methylobacterium sp. 4-46]
gi|168196731|gb|ACA18678.1| porin [Methylobacterium sp. 4-46]
Length = 294
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 74/280 (26%), Gaps = 82/280 (29%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI------------------ 76
DL A + W+G Y G + + T ++
Sbjct: 22 DLPRRAAPPPVFTPVPVFTWTGFYAGFNAGYGFGTSDNNNSTLIGVNAATGLVPPGTTAV 81
Query: 77 -NRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFYRLK--------- 123
+ ++ G ++G+N Q FV GI A R
Sbjct: 82 LGFRNRDNNDGFVGGGQVGYNYQFTPGAGFVIGIEADAQYADFGRERNRFSLVTNNPAVT 141
Query: 124 -------------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+G V + GY+ D L+Y GGF +S
Sbjct: 142 GLAAQQVFNPNGLSGLDYFGTVRGRLGYAFDRTLVYATGGFAYGGGGGTSFGLPNR---- 197
Query: 171 NAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPH-------HIHSV 213
D + +G G++Y + + ++L Y+ +V
Sbjct: 198 ------DDFQTGWTVGGGVEYALPTDSFLNFFKSNAVTLKVEGLYVNLDRGNGLNGAFAV 251
Query: 214 NNSNAKSDVER-----------VDRKGNAHIASLGINMHF 242
NN+ V V R + G+N F
Sbjct: 252 NNAGTLITVTSPGVVLVPGSGLVRRDTEFAVVRAGLNYKF 291
>gi|46203688|ref|ZP_00051145.2| COG0124: Histidyl-tRNA synthetase [Magnetospirillum magnetotacticum
MS-1]
Length = 284
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 65/241 (26%), Gaps = 52/241 (21%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSL----------------LPNGLGIELGHNI 97
W+G Y GLH + + T + + + +G G+N+
Sbjct: 41 WTGFYAGLHTGYAFTDNQNIRTSGNDLFTAGNVTAGRRPASLKSEVDGFSKIGGGFGYNV 100
Query: 98 QLED---FVFGINCHTTAAKDD-------------STFYRLKEKYFIYGDVVLKAGYSVD 141
Q FV G+ T D + G V K GY+ D
Sbjct: 101 QFTPGSGFVAGVALDVTWLDLDKHTGFYGTPNPVVGNASVYTQNIDFLGTVNGKLGYAFD 160
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG-HGSSVVLGIGLDYM-------- 192
L+YG GG YV + + G + G G++Y
Sbjct: 161 RFLVYGTGGLAFGYVGYGADFYNPNATVLQYTGGARKIFETGYNYGGGIEYAIPADSFLS 220
Query: 193 ---------VNYDISLSASYRYIPHHIHSVNNS--NAKSDVERVDRKGNAHIASLGINMH 241
+ D+++ A Y ++ + + G N
Sbjct: 221 TFAFGKWLGIKSDVTIKAEYIRYDLGNRNIFVGPVSTVPGSYTSRFSTEGSLIRAGFNYK 280
Query: 242 F 242
F
Sbjct: 281 F 281
>gi|220914733|ref|YP_002490041.1| porin [Methylobacterium nodulans ORS 2060]
gi|219952484|gb|ACL62874.1| porin [Methylobacterium nodulans ORS 2060]
Length = 287
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/252 (14%), Positives = 66/252 (26%), Gaps = 73/252 (28%)
Query: 54 WSGNYVGLHISRLYETHPLADTI-----------------NRKTYNSLLPNGLGIELGHN 96
W+G Y G + ++T P + ++L G ++G+N
Sbjct: 43 WTGFYAGFNAGYGFDTGPNRGPTVIGVGPATGLVIVPTVIAFRNESNLDGFTGGGQIGYN 102
Query: 97 IQLED---FVFGINCHTTAAKDDSTFYRLKEK----------------YFIYGDVVLKAG 137
Q V G+ R +G V + G
Sbjct: 103 YQFTPGAGVVIGLEADAQYVDFGRDRNRFIATGPIAAQRVFNPAGLAGLDFFGTVRGRLG 162
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV---- 193
Y+ D LIYG GGF D + G G++Y +
Sbjct: 163 YAWDRTLIYGTGGFAYGSGGGRDFGLPND----------DDFQTGWTAGGGVEYALPTDS 212
Query: 194 ------NYDISLSASYRYIPHH-----IHSVNNSNAKSDVER------------VDRKGN 230
+ +++ Y+ + +NA + + R
Sbjct: 213 FLNFFRSSSVTVKVEGLYVNLDRGRRFNGAFAVNNAGAIITTASPGVVVVNAGQFRRDTE 272
Query: 231 AHIASLGINMHF 242
+ G+N F
Sbjct: 273 FAVVRAGLNYKF 284
>gi|170741476|ref|YP_001770131.1| porin [Methylobacterium sp. 4-46]
gi|168195750|gb|ACA17697.1| porin [Methylobacterium sp. 4-46]
Length = 296
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/297 (14%), Positives = 75/297 (25%), Gaps = 82/297 (27%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI- 76
+ V DL A + W+G Y G + + T ++
Sbjct: 7 SATALAGVVIAGSAMAADLPRRAAPPPVFTPVPVFTWTGFYAGFNAGYGFGTSDNNNSTL 66
Query: 77 ------------------NRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKD 115
+ ++ G ++G+N Q V GI A
Sbjct: 67 IGVNAATGLVPPGTTAVLGFRNRDNNDGFVGGGQVGYNYQFTPGAGVVIGIEADAQYADF 126
Query: 116 DSTFYRLK----------------------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
R +G V + GY+ D L+Y GGF
Sbjct: 127 GRERNRFSLVTNNPAVTGLAAQQVFNPNGLSGLDYFGTVRGRLGYAFDRTLVYATGGFAY 186
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASY 203
+S D + +G G++Y + + ++L
Sbjct: 187 GGGGGTSFGLPNR----------DDFQTGWTVGGGVEYALPTDSFLNFFKSNAVTLKVEG 236
Query: 204 RYIPH-------HIHSVNNSNAKSDVER-----------VDRKGNAHIASLGINMHF 242
Y+ +VNN+ V V R + G+N F
Sbjct: 237 LYVNLDRGNGLNGAFAVNNAGTLITVTSPGVVLVPGSGLVRRDTEFAVVRAGLNYKF 293
>gi|159042840|ref|YP_001531634.1| putative outer membrane protein [Dinoroseobacter shibae DFL 12]
gi|157910600|gb|ABV92033.1| putative outer membrane protein [Dinoroseobacter shibae DFL 12]
Length = 216
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 58/187 (31%), Gaps = 17/187 (9%)
Query: 31 PRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG 90
P + V W+G Y+G + Y ++ G
Sbjct: 36 PEPAPVAPVMVAPVPAPAP---FWAGGYIGAQLGYAYG--DFDIDAAIDGDDNDDGFIGG 90
Query: 91 IELGHNIQLED-FVFGINCHTTAAKDDSTFYRL-KEKYFIYGDVVLKAGYSVDSLLIYGM 148
+ G+ + + G A + T + + L G + + L+YG
Sbjct: 91 LTAGYLFDVGSGWYVGPEVQYDWADLEITEDGGDTASFDEIARLKLIVGREIGNGLLYGT 150
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
G + D++ + DG ++ +LG+G DY V + ++ Y Y
Sbjct: 151 AGIAYGSL----------DSAGDVFDGIDGSDTNWLLGLGYDYRVGDNWTVGGEYMYHSF 200
Query: 209 HIHSVNN 215
+N
Sbjct: 201 DDVDLNT 207
>gi|319403868|emb|CBI77454.1| putative Hemin binding protein b [Bartonella rochalimae ATCC
BAA-1498]
Length = 356
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 39/129 (30%), Gaps = 14/129 (10%)
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK------ 173
Y K G ++ G S ++ Y GG A V S + V SKN
Sbjct: 236 YTHTLKRKWLGATRMRLGLSAGRVMPYIAGGIAYAKVQFISSKTVNIGASKNTVPMSSLD 295
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
LG G D+ + I L A YRY + K +
Sbjct: 296 SAEVEVMVGYTLGGGFDFAMTDRILLRAEYRYSDFGAEKFKKVDLKY--------YKVND 347
Query: 234 ASLGINMHF 242
+G+ F
Sbjct: 348 FRIGLAYKF 356
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 20/116 (17%)
Query: 20 PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET----HPLADT 75
P + A D +P + ++ + W G Y+G + + H D
Sbjct: 2 PFGAQASDTAVP----------SGLKSIASPFYSWDGFYLGGQVGSFSSSMSLLHNNTDK 51
Query: 76 INRKTYNS-----LLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEK 125
+ + + + G G N + + FV G++ + + + EK
Sbjct: 52 TDERNFKDVFSSEVSGITGGFYAGVNFEYSNRFVLGVDTDIVFSNKKAEKVFVDEK 107
>gi|85715276|ref|ZP_01046259.1| hypothetical protein NB311A_05248 [Nitrobacter sp. Nb-311A]
gi|85697922|gb|EAQ35796.1| hypothetical protein NB311A_05248 [Nitrobacter sp. Nb-311A]
Length = 283
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 72/292 (24%), Gaps = 78/292 (26%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+ + + A D+ DL + +W G Y+G S
Sbjct: 11 LLLAAVICGAAQGAYAADM----PDDLPFLRGSQPAGLSTVRTVWQGFYIGGQASYGSAD 66
Query: 70 HPLADTINR----------------------KTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
++ +S +G G LG+N+Q+ED VFG+
Sbjct: 67 MDFKNSGKDLLERLLNNLDVEGQYHLSTWPLGGTSSNRSSGFGGFLGYNVQMEDAVFGVE 126
Query: 108 CHTTAAKDDSTF---------------------YRLKEKYFIYGDVVLKAGYSVDSLLIY 146
+ T K + +G + ++ GYS L Y
Sbjct: 127 ANYTHGKFFGASSGSQGRSFNYPTNYLTSAFVQSNASMQITDFGSLRVRGGYSFGCFLPY 186
Query: 147 GMGGFGGAYVIDSSLE----------------KVESDNSKNAKGRFDGHGSSVVLGIGLD 190
G S +S + G+G+D
Sbjct: 187 AFAGVAMGRADIRRNASYSLYYQYIGTQIPPLPDLSGSSSLSDNANAHFIYGYAAGLGID 246
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
M+ + L A + ++ + G+ F
Sbjct: 247 MMIFDSLFLRAEWEFLRF---------------TAPVDTIVNTVRAGVGYRF 283
>gi|300023990|ref|YP_003756601.1| hypothetical protein Hden_2484 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525811|gb|ADJ24280.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 495
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 58/222 (26%), Gaps = 25/222 (11%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG-----------LGIELG 94
W G +G+ + L + + N + G
Sbjct: 22 ATPASANDWEGISLGVGGGYGMTKNDLNLGTGPAISSFIDANIGINGFGGSGGFATLSAG 81
Query: 95 HN-IQLEDFVFGINCHTTAAKDDST----------FYRLKEKYFIYGDVVLKAGYSVDSL 143
++ + V G + + +K K + + GY +
Sbjct: 82 YDHVLFGPLVVGAFIDYDFSDISTNIGAGSELGEIDANIKFKIENQLSIGGRIGYLIAPT 141
Query: 144 -LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L + G+ A D S G LG G++ +++ S+ A
Sbjct: 142 TLFFSTFGYAHAESSDIKANLNIGGGSGGGTLAGVGSFDGYFLGGGVETLISNGFSIKAE 201
Query: 203 YRYIPHHIHSVNN--SNAKSDVERVDRKGNAHIASLGINMHF 242
YRY ++ + + K + +N F
Sbjct: 202 YRYTSLQAERLDILPGSGADEFITGSIKPQIQTGRISLNYRF 243
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 62/199 (31%), Gaps = 25/199 (12%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTF------- 119
+ P + + G++ Q+ FV G + +
Sbjct: 286 SSEPGSIFSAGIPFGHDGGILF-ATAGYDYQISPRFVIGAFGDADYSHLKQSNSLSFAID 344
Query: 120 ------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
K + V + GY + L++ GG+ D++L S + +
Sbjct: 345 EDAEIRAGTKTQLKNMLMVGGRIGYLARPDTLLFLSGGYANVEADDTNLALGISVDGETV 404
Query: 173 KGRFD-----GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV----NNSNAKSDVE 223
G S +G G++ +N +SL A YRYI +V N+ +++
Sbjct: 405 AGGGTTLISGRRLSGGFIGGGIETRLNDSLSLKAEYRYIDLGSETVKLLPNDLPEINEIV 464
Query: 224 RVDRKGNAHIASLGINMHF 242
L IN F
Sbjct: 465 STKFDPEIQTGRLSINYRF 483
>gi|170747711|ref|YP_001753971.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170654233|gb|ACB23288.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 288
Score = 79.1 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 65/253 (25%), Gaps = 72/253 (28%)
Query: 54 WSGNYVGLHISRLYETHPLADTI------------------NRKTYNSLLPNGLGIELGH 95
W+G YVG++ ++ + T + N+ G ++G+
Sbjct: 41 WTGFYVGVNAGYGFDANSRNTTSYALPGGSLINSPGTAGVVSVSNRNNNDGFSGGAQIGY 100
Query: 96 NIQLED---FVFGINCHTTAAKD-----------------------DSTFYRLKEKYFIY 129
N Q V G + +
Sbjct: 101 NYQFTPGSGVVIGFEADAQYVDFARRANATQNYSFLGFPGVAFSNPPAFVATSGNGLDYF 160
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G V + GY+ D L+YG GGF D D + G G+
Sbjct: 161 GTVRGRLGYAFDRTLVYGTGGFAYGSGQDDQNFAGNRFR--------DSFRTGWAAGGGV 212
Query: 190 DYMV----------NYDISLSASYRYIPHHIHSVNNS----------NAKSDVERVDRKG 229
+Y + + ++L Y+ + N + + K
Sbjct: 213 EYALPTDSFLNFFRSSAVTLKVEGLYVSLDRQKNSAGGVFYGNLLPPNGIAYLNGAAAKT 272
Query: 230 NAHIASLGINMHF 242
+ G+N F
Sbjct: 273 EFAVVRAGLNYKF 285
>gi|87199458|ref|YP_496715.1| hypothetical protein Saro_1437 [Novosphingobium aromaticivorans DSM
12444]
gi|87135139|gb|ABD25881.1| hypothetical protein Saro_1437 [Novosphingobium aromaticivorans DSM
12444]
Length = 223
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 64/200 (32%), Gaps = 19/200 (9%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTY--NSLLPNGLGIELGHNIQLE-DFVFGINCHTT 111
SG + + + ++ ++ S+ G +G++I L + V G T
Sbjct: 31 SGFHAEALVGYDHNRSGSSEDVDNTRDLKQSIDGVEYGGAIGYDIPLGTNLVAGAEAEIT 90
Query: 112 AAKDDSTFYRLKEKYFIYGDVVL--------KAGYSVDS-LLIYGMGGFGGAYVIDSSLE 162
+ + F G V + GY++ ++Y GG+ A
Sbjct: 91 DSSASWDNNNDQPNVFNLGRVEAGRQYYVGARLGYAMSPSTMVYVKGGYSNARYNLQ--- 147
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
R +G G++ V + + Y+Y + + + D
Sbjct: 148 ----GTDGTTNLRQRLDADGYRVGAGVEQKVGENAFVKLEYKYANYSKGEFDFNGDTPDS 203
Query: 223 ERVDRKGNAHIASLGINMHF 242
R + + H + G+ + F
Sbjct: 204 SRFNLDTDRHSITAGVGVRF 223
>gi|170749946|ref|YP_001756206.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170656468|gb|ACB25523.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 245
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 61/209 (29%), Gaps = 26/209 (12%)
Query: 54 WSGNYVGLHISRLYETHPLA----DTINRKTYNSLLPNGLGIELGHNIQLED---FVFGI 106
W+G Y G++ + T G ++G+N Q V G+
Sbjct: 43 WTGFYAGVNAGYAFPTGSGGFTDPTYGTVTGGGRSGGFAGGGQVGYNYQFTPGSGVVVGV 102
Query: 107 NCHTTAAKDDST---------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+Y ++ +G V + GY+ D +L+YG GGF
Sbjct: 103 ETDIQGTAFAKADAAYLGTAPYYSVRPSLDYFGTVRARLGYAFDRVLVYGTGGFAYGGGA 162
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S+ + G G++Y +S Y+ + +
Sbjct: 163 RSTYAA------SYPYTLPSTDRTGYAAGGGIEYAFTEKLSAKVEALYLHLGRGTTAATY 216
Query: 218 AKSDVERV----DRKGNAHIASLGINMHF 242
+ V + + G+N F
Sbjct: 217 YNASVPAFYGAGKQDSGLALVRAGVNYRF 245
>gi|170747433|ref|YP_001753693.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170653955|gb|ACB23010.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 288
Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 75/290 (25%), Gaps = 72/290 (24%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT- 75
+++ + LA DL A + W+G Y G++ ++ + T
Sbjct: 4 LLLASTVLAGMTAAASAADLPRRAAPPPVFTPVPVFTWTGFYFGVNAGYGFDANSRNTTN 63
Query: 76 -----------------INRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKD 115
++ ++ G ++G+N Q V G
Sbjct: 64 YALPGGSLINSPGTAGVVSVNNRSNNDGFSGGAQIGYNYQFTPGSGVVIGFEADAQYVDF 123
Query: 116 D-----------------------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+ +G V + GY+ D L+YG GGF
Sbjct: 124 ARRANATQNYAFGGAPGIAFAAPRAFVATSGNGLDYFGTVRGRLGYAFDRTLVYGTGGFA 183
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSAS 202
D D + G G++Y + + ++L
Sbjct: 184 YGSGQDDQNFAGNRFR--------DSFRTGWAAGGGIEYALPTDSFLNFFRSNAVTLKVE 235
Query: 203 YRYIPHHIHSVNNS----------NAKSDVERVDRKGNAHIASLGINMHF 242
Y+ + N + + K + G+N F
Sbjct: 236 GLYVSLDRQKNSAGGVFYGNLLPPNGIAYLNGAAAKTEFAVVRAGLNYKF 285
>gi|323138214|ref|ZP_08073286.1| porin [Methylocystis sp. ATCC 49242]
gi|322396466|gb|EFX98995.1| porin [Methylocystis sp. ATCC 49242]
Length = 259
Score = 78.7 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 59/222 (26%), Gaps = 50/222 (22%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRK--------------TYNSLLPNGLGIELGHNIQL 99
W+G Y G++I + D T S G++ G+N QL
Sbjct: 41 WTGFYGGVNIGGSWLDRYNYDAWGPAWTGFGWINATQIAATNFSNAGVSGGVQAGYNYQL 100
Query: 100 EDF-VFGINCHTTAAKDDSTF----------------YRLKEKYFIYGDVVLKAGYS--- 139
+ V G+ ++ +G V + G +
Sbjct: 101 WSWLVAGVEADFQGTSIGASGVNNGWGLGFAGLPVLWGGASRGVDYFGTVRGRLGVTLPG 160
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
L+YG GGF + ++ G ++ + S
Sbjct: 161 WQQFLVYGTGGFAYGEIRINNGWLGNLRAVGTGWTVGGGV----------EWAFMPNWST 210
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
Y Y ++ ++ N H G+N H
Sbjct: 211 KVEYLYTSIG------ADQWGGTNLASQRVNMHTVRAGVNYH 246
>gi|83951536|ref|ZP_00960268.1| possible outer membrane protein [Roseovarius nubinhibens ISM]
gi|83836542|gb|EAP75839.1| possible outer membrane protein [Roseovarius nubinhibens ISM]
Length = 221
Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 64/233 (27%), Gaps = 43/233 (18%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+ + + + A ++ P + W+G Y G + +
Sbjct: 32 LTTIAAGLAITAPAYAGNISAP---VVEQPVAVAPAPVAPASPDWTGFYGGAQLGYGDVS 88
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY 129
A + GI G++ L +V G A +
Sbjct: 89 SNGALNGDDVI--------GGISAGYDYDLGSWVLGGGLDYDFADIN---LGGGTNLENV 137
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
L+AGY V + LIYG GG+ A + G +G G
Sbjct: 138 FRAKLRAGYKVGNGLIYGTGGYAQADTNTT------------------GSEDGYFVGAGY 179
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++MV+ +IS+ Y V A +N F
Sbjct: 180 EHMVSQNISVGGEALYHEFEN-----------VGGTTTDVEAMTYQAKVNFRF 221
>gi|220921616|ref|YP_002496917.1| porin [Methylobacterium nodulans ORS 2060]
gi|219946222|gb|ACL56614.1| porin [Methylobacterium nodulans ORS 2060]
Length = 285
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 67/252 (26%), Gaps = 73/252 (28%)
Query: 54 WSGNYVGLHISRLYETHPLADTI-----------------NRKTYNSLLPNGLGIELGHN 96
W+G Y G + ++ + N+L G ++G+N
Sbjct: 41 WTGFYAGFNAGYGFDVSSNNGPTVLGVGPATGLVFAPTVIAFRNQNNLDGFVGGGQVGYN 100
Query: 97 IQLED---FVFGINCHTTAAKDDSTFYRLKEK----------------YFIYGDVVLKAG 137
Q FV G+ A R +G V + G
Sbjct: 101 YQFTPGAGFVIGLEADAQFADFGRNRNRFIATGPIAAQTVFNPAGIAGLDWFGTVRGRLG 160
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV---- 193
Y+VD +L YG GGF D + G G++Y +
Sbjct: 161 YAVDRVLFYGTGGFAYGGGGGRDFGLPND----------DDFQTGWTAGGGVEYALPTDS 210
Query: 194 ------NYDISLSASYRYIPHH-----IHSVNNSNAKSDVER------------VDRKGN 230
+ +++ Y+ + +NA + + R
Sbjct: 211 FLNFFRSNAVTVKVEGLYVNLDRGRRFNGAFAVNNAGAIITTASPGVVVVNAGQFRRDTE 270
Query: 231 AHIASLGINMHF 242
+ G+N F
Sbjct: 271 FAVVRAGLNYKF 282
>gi|170741253|ref|YP_001769908.1| porin [Methylobacterium sp. 4-46]
gi|168195527|gb|ACA17474.1| porin [Methylobacterium sp. 4-46]
Length = 300
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 70/299 (23%), Gaps = 82/299 (27%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
+V +++ + +D + + G W G Y G H +
Sbjct: 3 IVTSTLLAGLCVCGLTPARAADLDFATLRGTSYDAPAPA-GNWDGFYFGGHGGWTSTSFG 61
Query: 72 LADTINRKTYNSL----------------------LPNGLGIELGHNIQLEDFVFGINCH 109
N L G +G N QL++FV G
Sbjct: 62 FGSVFQAPVANYLRQTKFESDLNASTLLHPGSMRRDSTTFGAYVGINFQLDEFVAGAELD 121
Query: 110 TTAAKDDS---------------------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
T + Y + + GY + + +
Sbjct: 122 YTHLSARGWTSDEIGRAIVGSDGWWRAVYLTGNASTRIDDYATLRARFGYDAGNFMPFVT 181
Query: 149 GGFGGAYVIDS------------------SLEKVESDNSKNAKGRFDGHG---------- 180
GGF S + + + FD
Sbjct: 182 GGFAIGRAQISETIGVQPIEYDQATYKSNQSAARPAYVNYSGYSNFDQTNPGASTPSAPH 241
Query: 181 ----------SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ G G+++ + +I L A Y+++ + + +N + K
Sbjct: 242 LLVRSREKIVGGIAAGAGMEFAMTANILLRAEYQFVQFNDFDGHKANINTVRGGAALKF 300
>gi|225629377|ref|ZP_03787410.1| heat resistant agglutinin 1 precursor [Brucella ceti str. Cudo]
gi|225615873|gb|EEH12922.1| heat resistant agglutinin 1 precursor [Brucella ceti str. Cudo]
Length = 287
Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 83/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 9 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 57
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 58 KSKTGGKWDFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 117
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 118 ASINGRTNCPSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 177
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 178 IGAAYVKYDTWKTSEICPTCTLQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 237
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 238 VNGGNAYGYDEQDRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 286
>gi|237816813|ref|ZP_04595805.1| outer surface protein [Brucella abortus str. 2308 A]
gi|237787626|gb|EEP61842.1| outer surface protein [Brucella abortus str. 2308 A]
Length = 287
Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 83/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 9 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 57
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 58 KSKTGGKWDFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 117
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 118 ASINGRTNCRSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 177
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 178 IGAAYVKYDTWKTSEICPTCTLQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 237
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 238 VNGGNAYGYDEQDRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 286
>gi|15420182|gb|AAK97313.1|AF308171_1 Pap31 [Bartonella quintana phage]
Length = 228
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 59/237 (24%), Gaps = 58/237 (24%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
++++ + + A D+ W+G Y+G I + +
Sbjct: 1 VIALISASAAQAADVIAT---------HEAAPVITTPNFSWTGFYIGGQIGNFTSDNKIK 51
Query: 74 DTINRKTY------NSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK------------ 114
+ L GI G NI L + G+ A
Sbjct: 52 GLGKETSIFTKELTPQLSGIVGGIYAGSNIDLGSGLILGVETDAIWADCEATKTSAIRTL 111
Query: 115 -------------------------DDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGM 148
+D+ K G + G+ + D ++ Y
Sbjct: 112 SVPQANSLNDEFKAAGITLKDKFSENDTMSDHYTYKAKWSGATRARIGFSAFDRVMPYFA 171
Query: 149 GGFGGAYVID----SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
GG A + S + ++ + G+D + ++ L
Sbjct: 172 GGVAYARMQGMKSVSGMNAAKNKKLGGGLYDETKMMVGFTVSGGVDVAMTGNVLLRG 228
>gi|261217511|ref|ZP_05931792.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|260922600|gb|EEX89168.1| conserved hypothetical protein [Brucella ceti M13/05/1]
Length = 286
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 83/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 9 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 57
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 58 KSKTGGKWDFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 117
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 118 ASINGRTNCPSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 177
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 178 IGAAYVKYDTWKTSEICPTCTLQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 237
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 238 VNGGNAYGYDEQDRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 286
>gi|163845036|ref|YP_001622691.1| hypothetical protein BSUIS_B0913 [Brucella suis ATCC 23445]
gi|163675759|gb|ABY39869.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 284
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 83/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 6 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPRPAL---AGWYLRGDIGYNF 54
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 55 KSKTGGKWNFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 114
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 115 ASINGRTNCPSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 174
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 175 IGAAYVKYDTWKTSEICPTCTLQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 234
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 235 VNGSNAYGYDEQDRQVINQYGQDAGADGPQAKDNGFNIHTVRAGLRYEF 283
>gi|115526159|ref|YP_783070.1| hypothetical protein RPE_4165 [Rhodopseudomonas palustris BisA53]
gi|115520106|gb|ABJ08090.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 263
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 54/238 (22%), Gaps = 63/238 (26%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLL----------------------PNGLG 90
W G YVG H + L +G G
Sbjct: 41 NWEGFYVGGHAGYGTSDMNFTNATEGVVAKLLDNTVVESLLGVSSWPVLDKRSAHGHGYG 100
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDSTFYR--------------------LKEKYFIYG 130
+G+N Q + V GI + G
Sbjct: 101 GFVGYNAQWDSVVLGIEANYLHGNFGGATTGSMARELISGGINYGATNTSSASINVRDVG 160
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN------SKNAKGRFDGHGSSVV 184
L+AGY+ L Y GG + + A+ +
Sbjct: 161 SARLRAGYAWKGFLPYMFGGVSLGQADIIRAATIRGRDAGGTWVLSAAQAQHGHFIYGYA 220
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+G+D M+ + L A + Y+ + G+ F
Sbjct: 221 GGVGIDMMLVGGLFLRAEWEYLKFA---------------APVDTSVSTVRAGLGYKF 263
>gi|86748435|ref|YP_484931.1| hypothetical protein RPB_1310 [Rhodopseudomonas palustris HaA2]
gi|86571463|gb|ABD06020.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 265
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 55/239 (23%), Gaps = 64/239 (26%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRK----------------------TYNSLLPNGLG 90
W G YVG + +S G G
Sbjct: 42 NWQGFYVGGQAGTGASDMDFTNATQGAVATLLTNTVIQNTMAVSDWPVLGKSSSRGQGWG 101
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDSTFYRL--------------------KEKYFIYG 130
+G+N Q +D V GI + + K G
Sbjct: 102 GFVGYNAQWDDVVLGIEANYMHGSFGGSTSGYMGRIFSTGGVTYDVDYNAAASIKVNDVG 161
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG-------RFDGHGSSV 183
L+AG+++ S L Y GG ++ A +
Sbjct: 162 SARLRAGWAIGSFLPYAFGGVALGQADIVRTARISGTQGGTAFTPLVSNLVQNSHFIYGY 221
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+G+D M+ + + A + Y G+ F
Sbjct: 222 SGGLGVDMMLYRGLFVRAEWEYQKFA---------------APINTAVSTVRAGVGYKF 265
>gi|220924420|ref|YP_002499722.1| porin [Methylobacterium nodulans ORS 2060]
gi|219949027|gb|ACL59419.1| porin [Methylobacterium nodulans ORS 2060]
Length = 285
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 61/259 (23%), Gaps = 80/259 (30%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSL----------------------LPNG 88
G W G YVG H + + N
Sbjct: 27 VGNWDGFYVGGHGGWTSTSFGFGNVFQAPVANYFRLTTYEANLSASTLLRAQDARRDGTS 86
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL--------------------KEKYFI 128
G G N Q ++FV G T + K +
Sbjct: 87 FGAYAGVNFQFDEFVAGAELDYTHLGVTGSTTDAIARQKVTDGYWQALSLVGEAKTRLDD 146
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS------- 181
Y + + GY + + Y GGF + +++ A +
Sbjct: 147 YATIRARFGYDAGNFMPYVTGGFAIGRAQITDTVTIQARGYDQATYNSNQATGATAYVNR 206
Query: 182 -------------------------------SVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G G+++ + +I L A Y+++ +
Sbjct: 207 DGYRSFDPTNVSRSVVADPDVVQRTREKIVGGIAAGAGMEFALTANILLRAEYQFVQFND 266
Query: 211 HSVNNSNAKSDVERVDRKG 229
+ +N + K
Sbjct: 267 FDGHKANINTVRGGASVKF 285
>gi|90409178|ref|ZP_01217293.1| outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90309723|gb|EAS37893.1| outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 326
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 31/189 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAAKD 115
Y+G + +SL G G+ +G++ D+ F I +
Sbjct: 28 FYIGAKAGWSKYQDACLYGYTKCEEDSL---GYGLFVGYD--FTDW-FAIEGGVTNHNEV 81
Query: 116 DSTFYRLKEK-YFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+S++ + I D+ K GY + D++ +Y G ++ + +
Sbjct: 82 NSSYQNYDVEALAISSDLSTKFGYRLTDNVQLYTKVGISYQHINKTMSDL---------- 131
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G F G ++ +G+DY ++ + SL Y++I + K + H
Sbjct: 132 GDFSGSSFGGLVAMGIDYKLDNNWSLRGEYQFID------------GIGDDTSLKADLHF 179
Query: 234 ASLGINMHF 242
S+GI F
Sbjct: 180 TSVGIKYRF 188
>gi|17988721|ref|NP_541354.1| heat resistant agglutinin 1 precursor [Brucella melitensis bv. 1
str. 16M]
gi|254700121|ref|ZP_05161949.1| heat resistant agglutinin 1 precursor [Brucella suis bv. 5 str.
513]
gi|254710845|ref|ZP_05172656.1| heat resistant agglutinin 1 precursor [Brucella pinnipedialis
B2/94]
gi|254712681|ref|ZP_05174492.1| heat resistant agglutinin 1 precursor [Brucella ceti M644/93/1]
gi|256015682|ref|YP_003105691.1| outer surface protein [Brucella microti CCM 4915]
gi|256029228|ref|ZP_05442842.1| heat resistant agglutinin 1 precursor [Brucella pinnipedialis
M292/94/1]
gi|256043787|ref|ZP_05446709.1| heat resistant agglutinin 1 precursor [Brucella melitensis bv. 1
str. Rev.1]
gi|256111168|ref|ZP_05452204.1| heat resistant agglutinin 1 precursor [Brucella melitensis bv. 3
str. Ether]
gi|256157423|ref|ZP_05455341.1| heat resistant agglutinin 1 precursor [Brucella ceti M490/95/1]
gi|256253599|ref|ZP_05459135.1| heat resistant agglutinin 1 precursor [Brucella ceti B1/94]
gi|260167678|ref|ZP_05754489.1| outer surface protein [Brucella sp. F5/99]
gi|260564972|ref|ZP_05835457.1| heat resistant agglutinin [Brucella melitensis bv. 1 str. 16M]
gi|261220735|ref|ZP_05935016.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261318418|ref|ZP_05957615.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261320386|ref|ZP_05959583.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261750613|ref|ZP_05994322.1| outer surface protein [Brucella suis bv. 5 str. 513]
gi|261757114|ref|ZP_06000823.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265986216|ref|ZP_06098773.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265990214|ref|ZP_06102771.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992679|ref|ZP_06105236.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265995912|ref|ZP_06108469.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|81850644|sp|Q8YD01|Y376_BRUME RecName: Full=Uncharacterized protein BMEII0376; Flags: Precursor
gi|17984533|gb|AAL53618.1| heat resistant agglutinin 1 precursor [Brucella melitensis bv. 1
str. 16M]
gi|255998342|gb|ACU50029.1| outer surface protein [Brucella microti CCM 4915]
gi|260152615|gb|EEW87708.1| heat resistant agglutinin [Brucella melitensis bv. 1 str. 16M]
gi|260919319|gb|EEX85972.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261293076|gb|EEX96572.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261297641|gb|EEY01138.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261737098|gb|EEY25094.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261740366|gb|EEY28292.1| outer surface protein [Brucella suis bv. 5 str. 513]
gi|262550209|gb|EEZ06370.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262763549|gb|EEZ09581.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000883|gb|EEZ13573.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|264658413|gb|EEZ28674.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 284
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 83/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 6 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 54
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 55 KSKTGGKWDFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 114
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 115 ASINGRTNCPSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 174
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 175 IGAAYVKYDTWKTSEICPTCTLQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 234
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 235 VNGGNAYGYDEQDRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 283
>gi|62317253|ref|YP_223106.1| outer surface protein [Brucella abortus bv. 1 str. 9-941]
gi|83269234|ref|YP_418525.1| heat resistant agglutinin 1 precursor [Brucella melitensis biovar
Abortus 2308]
gi|189022514|ref|YP_001932255.1| heat resistant agglutinin 1 precursor [Brucella abortus S19]
gi|254690760|ref|ZP_05154014.1| heat resistant agglutinin 1 precursor [Brucella abortus bv. 6 str.
870]
gi|254698539|ref|ZP_05160367.1| heat resistant agglutinin 1 precursor [Brucella abortus bv. 2 str.
86/8/59]
gi|254705615|ref|ZP_05167443.1| heat resistant agglutinin 1 precursor [Brucella pinnipedialis
M163/99/10]
gi|254731986|ref|ZP_05190564.1| heat resistant agglutinin 1 precursor [Brucella abortus bv. 4 str.
292]
gi|256255943|ref|ZP_05461479.1| heat resistant agglutinin 1 precursor [Brucella abortus bv. 9 str.
C68]
gi|260544491|ref|ZP_05820312.1| heat resistant agglutinin 1 [Brucella abortus NCTC 8038]
gi|260756331|ref|ZP_05868679.1| outer surface protein [Brucella abortus bv. 6 str. 870]
gi|260759759|ref|ZP_05872107.1| outer surface protein [Brucella abortus bv. 4 str. 292]
gi|260762998|ref|ZP_05875330.1| outer surface protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260882155|ref|ZP_05893769.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261313025|ref|ZP_05952222.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|297249300|ref|ZP_06933001.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
gi|75495788|sp|Q579D9|Y312_BRUAB RecName: Full=Uncharacterized protein BruAb2_0312; Flags: Precursor
gi|123545435|sp|Q2YIU6|Y314_BRUA2 RecName: Full=Uncharacterized protein BAB2_0314; Flags: Precursor
gi|62197446|gb|AAX75745.1| outer surface protein [Brucella abortus bv. 1 str. 9-941]
gi|82939508|emb|CAJ12480.1| heat resistant agglutinin 1 precursor [Brucella melitensis biovar
Abortus 2308]
gi|189021088|gb|ACD73809.1| heat resistant agglutinin 1 precursor [Brucella abortus S19]
gi|260097762|gb|EEW81636.1| heat resistant agglutinin 1 [Brucella abortus NCTC 8038]
gi|260670077|gb|EEX57017.1| outer surface protein [Brucella abortus bv. 4 str. 292]
gi|260673419|gb|EEX60240.1| outer surface protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260676439|gb|EEX63260.1| outer surface protein [Brucella abortus bv. 6 str. 870]
gi|260871683|gb|EEX78752.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261302051|gb|EEY05548.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|297173169|gb|EFH32533.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
Length = 284
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 83/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 6 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 54
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 55 KSKTGGKWDFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 114
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 115 ASINGRTNCRSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 174
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 175 IGAAYVKYDTWKTSEICPTCTLQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 234
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 235 VNGGNAYGYDEQDRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 283
>gi|225686680|ref|YP_002734652.1| outer surface protein [Brucella melitensis ATCC 23457]
gi|256262187|ref|ZP_05464719.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|225642785|gb|ACO02698.1| outer surface protein [Brucella melitensis ATCC 23457]
gi|263091883|gb|EEZ16205.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326411072|gb|ADZ68136.1| outer surface protein [Brucella melitensis M28]
gi|326554363|gb|ADZ89002.1| outer surface protein [Brucella melitensis M5-90]
Length = 284
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 83/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 6 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 54
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 55 KSKTGGKWDFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 114
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 115 ASINGRTNCPSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 174
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 175 IGAAYVKYDTWKTSEICPTCTLQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 234
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 235 VNGGNAYGYDEQNRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 283
>gi|23500648|ref|NP_700088.1| outer surface protein [Brucella suis 1330]
gi|161620973|ref|YP_001594859.1| outer surface protein [Brucella canis ATCC 23365]
gi|254703240|ref|ZP_05165068.1| outer surface protein [Brucella suis bv. 3 str. 686]
gi|260567826|ref|ZP_05838295.1| heat resistant agglutinin 1 [Brucella suis bv. 4 str. 40]
gi|261753871|ref|ZP_05997580.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|81751057|sp|Q8FVC3|Y921_BRUSU RecName: Full=Uncharacterized protein BRA0921; Flags: Precursor
gi|23464292|gb|AAN34093.1| outer surface protein [Brucella suis 1330]
gi|161337784|gb|ABX64088.1| outer surface protein [Brucella canis ATCC 23365]
gi|260154491|gb|EEW89572.1| heat resistant agglutinin 1 [Brucella suis bv. 4 str. 40]
gi|261743624|gb|EEY31550.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 284
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 83/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 6 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 54
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 55 KSKTGGKWNFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 114
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 115 ASINGRTNCPSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 174
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 175 IGAAYVKYDTWKTSEICPTCTLQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 234
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 235 VNGGNAYGYDEQDRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 283
>gi|163867546|ref|YP_001608745.1| hemin binding protein A [Bartonella tribocorum CIP 105476]
gi|161017192|emb|CAK00750.1| hemin binding protein A [Bartonella tribocorum CIP 105476]
Length = 290
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 9/128 (7%)
Query: 117 STFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSL-EKVESDNSKNAKG 174
+ K G ++ G++ D ++ Y GG + + KV
Sbjct: 170 DVSEGVGFKQKWAGATRVRVGFAAADRIMPYVAGGVAYTQLEAAHGQVKVADKTFSAGSS 229
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+G G+D+ + ++ L A YRY + + + + D
Sbjct: 230 DETATMVGFTIGGGIDFAMTDNVLLRAEYRYSDYGKKKFFAKEKEYNFKTNDF------- 282
Query: 235 SLGINMHF 242
+G+ F
Sbjct: 283 RVGVAYKF 290
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 20/80 (25%), Gaps = 6/80 (7%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKT-----YNSLLPNGLGIELGHNIQ 98
W+G Y+G I L D + L G G N
Sbjct: 32 APVITAPSFSWTGFYIGGQIGGFSSKIDLKDKDKDTSVFKDLSPKLSGLIGGFYAGSNFD 91
Query: 99 LED-FVFGINCHTTAAKDDS 117
L + + G+ +
Sbjct: 92 LGNGIILGVETDVIWSGKKD 111
>gi|148253343|ref|YP_001237928.1| hypothetical protein BBta_1819 [Bradyrhizobium sp. BTAi1]
gi|146405516|gb|ABQ34022.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 302
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/268 (12%), Positives = 61/268 (22%), Gaps = 88/268 (32%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLA--------------------DTINRKTYNSLLPNGL 89
W G YVG + T + N + +
Sbjct: 48 ARANWDGYYVGGQFGYGTSDMDFSRSAASLTNFIFRNSVLQTPTSTWSVLNKNHVQGSSF 107
Query: 90 GIELGHNIQLEDFVFGINCHTTAAK------------------------------DDSTF 119
G+ +G N Q ED V+GI + S
Sbjct: 108 GVYVGRNFQWEDTVWGIEVNYNYMNRMVSSSGSSMALNIVNPSGETVAANETRTYSTSVQ 167
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE-------------- 165
+ + + G++ D+ L Y GG + S +
Sbjct: 168 AAAALQIKDVVTLRGRVGWAADNFLPYVFGGLAVGRMETSRVATTNVYLTDTFVNQTTGA 227
Query: 166 -----------SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
S + + R + G+G +YM+ + + Y+
Sbjct: 228 IISQTGPSYLPSVSRTYGESRTNSFVGGWTGGLGFEYMMWGGLFARGEWEYVKFMTVK-- 285
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
D + G+ F
Sbjct: 286 -----------DTAVTLNSFRAGVGYKF 302
>gi|87118661|ref|ZP_01074560.1| putative outer-membrane immunogenic protein precursor [Marinomonas
sp. MED121]
gi|87118664|ref|ZP_01074563.1| putative outer-membrane immunogenic protein precursor [Marinomonas
sp. MED121]
gi|86166295|gb|EAQ67561.1| putative outer-membrane immunogenic protein precursor [Marinomonas
sp. MED121]
gi|86166298|gb|EAQ67564.1| putative outer-membrane immunogenic protein precursor [Marinomonas
sp. MED121]
Length = 258
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 72/238 (30%), Gaps = 40/238 (16%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHP----------LADTINRKTYNSLLP-------- 86
+ ++ E W G Y G+ I T D N + L P
Sbjct: 21 QAEETETVNWEGLYTGIAIGISSSTASPSTEVEYSGYFNDNSNGSDRDQLDPILQREIEG 80
Query: 87 --NGLGIELGHNIQLEDFVFGINCHTTAA-----------------KDDSTFYRLKEKYF 127
+ LG++ Q FV+G+ T A + + K
Sbjct: 81 DTTSGSLLLGYHFQKGKFVYGLEADLTFAEFSESESEGPTDYDTTAGASNFTTVTEIKTD 140
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
+ K GY D+ L++ G + + + + + I
Sbjct: 141 YMFSLRPKVGYVKDNFLMHISAGPVISEFTTTHSYTDTHGSGASLSFEDKDSSVGLSANI 200
Query: 188 GLDYMVNYDISLSASYRYIPHH---IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+DY+++ +S+ A Y Y+ S + ++ SD + L + F
Sbjct: 201 GIDYLISNGLSIRADYTYLHFSDILDGSGDVNSDGSDDITYGSDFTSQNIRLALTKQF 258
>gi|119385805|ref|YP_916860.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
gi|119376400|gb|ABL71164.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
Length = 203
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 64/190 (33%), Gaps = 34/190 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTA 112
W+G Y G+ +S ++NR + GI G+N QL + V G
Sbjct: 47 WTGFYAGMQMSYSDF------SVNRDGVDDATGGVYGIHAGYNHQLHNNMVIGGEITFDH 100
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ D+ ++++ V K GY+ ++ L+YG+ G+
Sbjct: 101 SSADNDVWQVER----LMTVRAKVGYAHNNWLVYGLAGYAHVRTE--------------G 142
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
R G V GIG DY V+ + S+ + N + +
Sbjct: 143 ADRAHGKSGGAVFGIGADYAVSDKWLVGGSWEGYRFSDFKNDPDN---------MEVDGG 193
Query: 233 IASLGINMHF 242
++ F
Sbjct: 194 SVRFRVSYRF 203
>gi|254715751|ref|ZP_05177562.1| heat resistant agglutinin 1 precursor [Brucella ceti M13/05/1]
Length = 283
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 83/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 6 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 54
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 55 KSKTGGKWDFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 114
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 115 ASINGRTNCPSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 174
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 175 IGAAYVKYDTWKTSEICPTCTLQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 234
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 235 VNGGNAYGYDEQDRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 283
>gi|119383601|ref|YP_914657.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
gi|119373368|gb|ABL68961.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
Length = 199
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 68/241 (28%), Gaps = 49/241 (20%)
Query: 5 GYGALFFVVFLSIVVPNHSLAV---DLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGL 61
GY AL ++ + V + P + + E+D W+G Y GL
Sbjct: 5 GYAALASLIAGGAYAGGYVAPVVEQPVVAPAPVTITPESD------------WTGFYAGL 52
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR 121
+ L + + +G G+ G+ L FV G D +
Sbjct: 53 Q--YGKGSGDLGNRGALADFGDY--DGYGLHAGYQRDLGRFVLGGELDYNKISPDENYDD 108
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+ L+AG + L Y G V D +
Sbjct: 109 GDLT-----RLRLRAGADMGRFLPYVTLGAAKISVD-------------------DFSET 144
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ G+G D+ V ++ A Y + + R + + L +
Sbjct: 145 GLTYGLGADFKVTERFTVGAEYSRSDFKDVLEDETGISG------RDLDTDLVQLRASYR 198
Query: 242 F 242
F
Sbjct: 199 F 199
>gi|255264610|ref|ZP_05343952.1| putative outer membrane protein [Thalassiobium sp. R2A62]
gi|255106945|gb|EET49619.1| putative outer membrane protein [Thalassiobium sp. R2A62]
Length = 207
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 77/231 (33%), Gaps = 33/231 (14%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
+ + + +DL + + N WSG+Y G +S
Sbjct: 9 SIVAMLSSGAIAGNIDLAIADPVIAIPPTSN--------VTDWSGSYCG--LSYSSAGGT 58
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
L+ + Y+ + +G G+N Q + V+G + T + + +
Sbjct: 59 LSYSFG-SPYDYVDETAIGGFCGNNWQRSNLVYGGELNVTGGSLGHDDINVVGELGTRIE 117
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ + GY++ L+YG G+G + + E + G+G+DY
Sbjct: 118 LRTRVGYALGDALVYGFLGYGRSEITWGGNAPGEYGVA------------GGTYGLGVDY 165
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
MV + S V+N K V + ++ SL I F
Sbjct: 166 MVTDSMFASFE----------VSNLELKETVTTGIVTHDINVISLRIGWKF 206
>gi|299134299|ref|ZP_07027492.1| porin [Afipia sp. 1NLS2]
gi|298591046|gb|EFI51248.1| porin [Afipia sp. 1NLS2]
Length = 275
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 57/250 (22%), Gaps = 74/250 (29%)
Query: 53 IWSGNYVGLHISRLYE-----------------THPLADTINRKTYNSLLPNG------L 89
W G Y G + + +N ++ L +
Sbjct: 40 NWQGFYAGGQAGYGSADMNFSSSNSAMIAQLLANTNIENEMNVSSWPLLGGKTNTHQSQV 99
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL-----------------------KEKY 126
G +G+N Q +D V G+ +
Sbjct: 100 GGFVGYNSQWDDVVLGVEANYMHGTFSGASVSAPVSRGMLLTSDSLYHIVTVNSSKSISI 159
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI--------------DSSLEKVESDNSKNA 172
G + +AGY + + Y GG ++ + +
Sbjct: 160 SDMGTIRARAGYVWGNFMPYVFGGAALGRGNIYSAVSVSDQKGADSAAAQAATPVTLSAS 219
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G G+G + M+ ++ A + YI N +
Sbjct: 220 DGISGKMLYGYTAGLGTEVMLFGNVFARAEWEYIRF--------------VNAGADVNIN 265
Query: 233 IASLGINMHF 242
G+ F
Sbjct: 266 TVRGGLGYKF 275
>gi|188583655|ref|YP_001927100.1| porin [Methylobacterium populi BJ001]
gi|179347153|gb|ACB82565.1| porin [Methylobacterium populi BJ001]
Length = 288
Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/273 (15%), Positives = 66/273 (24%), Gaps = 74/273 (27%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI------------------ 76
DL A +Q W+G Y G + + T
Sbjct: 22 DLPRRAAPPPVFQPVPVFTWTGFYAGFNAGYGFGTQDDRAPTVIGVGPASLLVPPGTTAV 81
Query: 77 -NRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFYRLKEK------- 125
S G ++G+N Q FV G+ A R
Sbjct: 82 VAFSNRESNEGFVGGGQIGYNYQFTPGSGFVIGVEADAQYADFGRNRNRFVSTSPLAAQQ 141
Query: 126 ---------YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+G V + GY+ D L+YG GGF
Sbjct: 142 VFNPAGLSGLDFFGTVRGRLGYAFDRTLVYGTGGFAYGSGGGREFGT---------GVSS 192
Query: 177 DGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D + V G G++Y + + ++L Y+ +S D +
Sbjct: 193 DDFQTGWVAGGGVEYALPTDSFLNFFKSSAVTLKVEGLYVNLDRNSGGRGAFAVDNQGRT 252
Query: 227 R-----------------KGNAHIASLGINMHF 242
+ G+N F
Sbjct: 253 VSVGNPGTVLVSGGQQVRDTEFAVVRAGLNYKF 285
>gi|310816897|ref|YP_003964861.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
gi|308755632|gb|ADO43561.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
Length = 237
Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 66/216 (30%), Gaps = 23/216 (10%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHP--------LADTINRKTYNSLLPNGLG 90
EA + ++G YVGL + + L
Sbjct: 33 EAPVVIPVAPVLTNRFAGGYVGLGYGHVVSSDDRVGMVDQTTNLLTGVLGDLDLEGGAAI 92
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDS---TFYRLKEKYFIYGDVVLKAGYSVDS-LLIY 146
++ G+ + V+G D+ + GY+V LL+Y
Sbjct: 93 LQAGYRWANGNLVYGPTLRVRGGGIDAELTGTSTGSSTVNWEAALRGNLGYTVTPSLLLY 152
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G G+ A V + + V G+G +Y +N + SL Y Y
Sbjct: 153 GFVGYTYAEVEYDVAGAINV--------AETVNFGGVNAGLGAEYALNDNWSLFGEYEYA 204
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + + + + H ++G+N F
Sbjct: 205 GYEGKNLVD---PAINQHTRPTPDFHSVNIGVNFSF 237
>gi|3426106|emb|CAA07721.1| hypothetical protein [Rhizobium leguminosarum]
Length = 139
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 36/109 (33%), Gaps = 8/109 (7%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
+ + Q WSG Y+GL D + L GI G+N
Sbjct: 26 QDPAYVQQGQTQSAFDWSGFYLGLQGGYTSTHASYLD----GSEQDLDGGSTGIYGGYNF 81
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
Q FVFGI D + G + GY++D LIY
Sbjct: 82 QHGPFVFGIENDFNYNWKDGS----DVSLKWDGSARGRVGYALDRTLIY 126
>gi|91978374|ref|YP_571033.1| hypothetical protein RPD_3911 [Rhodopseudomonas palustris BisB5]
gi|91684830|gb|ABE41132.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 264
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/239 (15%), Positives = 55/239 (23%), Gaps = 64/239 (26%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLL----------------------PNGLG 90
W G YVG D+ N L+ G G
Sbjct: 41 NWQGFYVGGQAGTGASDMDFTDSTRGAAANLLVNTVIENTMSVSGWPVLGTTSSRGQGYG 100
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDSTFYRL--------------------KEKYFIYG 130
+G+N Q +D V GI + + K G
Sbjct: 101 GFVGYNAQWDDVVLGIEANYMHGSFGGSTSGYMGRMFSSNNVPYDVDYTASASIKVNDVG 160
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG-------RFDGHGSSV 183
L+AG++ S L Y GG + + +
Sbjct: 161 SARLRAGWAFGSFLPYAFGGVALGQADIIRTAMISGTQNGVRFTPLVSNQIQNGHFIYGY 220
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+G+D MV + + A + Y G+ F
Sbjct: 221 SGGLGIDMMVYRGLFVRAEWEYQKFA---------------APINTAVSTVRAGVGYKF 264
>gi|84515617|ref|ZP_01002979.1| possible outer membrane protein [Loktanella vestfoldensis SKA53]
gi|84510900|gb|EAQ07355.1| possible outer membrane protein [Loktanella vestfoldensis SKA53]
Length = 205
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/234 (14%), Positives = 50/234 (21%), Gaps = 37/234 (15%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDD--EYGIWSGNYVGLHISRLYE 68
FV + P A W+G Y G +
Sbjct: 7 FVRTAMLAAPFAVAAGMSAAGGMAQPVETVAPTPVAPAPMMASTDWTGFYAGGQLGYA-- 64
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
D T + G+ G+ L V G + D
Sbjct: 65 -----DVTGSGTTADVDGAIYGVHGGYMYDLGSVVLGGEVDYDLSSID--NVAGTADLDD 117
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
V + GY + L Y GG A D G+G
Sbjct: 118 IMRVKARVGYDAGAFLPYVTGGVVRANT-----------------SGPDLEVDGDFYGLG 160
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ Y +I + D + A A+ ++ F
Sbjct: 161 VAYKYADNIVFGGEVLQHKF---------YEGDAATLTDTLRATTATARVSYQF 205
>gi|254695935|ref|ZP_05157763.1| heat resistant agglutinin 1 precursor [Brucella abortus bv. 3 str.
Tulya]
gi|261216363|ref|ZP_05930644.1| outer surface protein [Brucella abortus bv. 3 str. Tulya]
gi|260917970|gb|EEX84831.1| outer surface protein [Brucella abortus bv. 3 str. Tulya]
Length = 284
Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 83/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 6 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 54
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 55 KSKTGGKWDFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 114
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 115 ASINGRTNCRSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 174
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 175 IGAAYVKYDTWKTSEICPTCTLQSDKDGFDSWCFAMALMAGVSYDLTDQLKLDLGYRYLR 234
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 235 VNGGNAYGYDEQDRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 283
>gi|254475346|ref|ZP_05088732.1| putative outer membrane protein [Ruegeria sp. R11]
gi|214029589|gb|EEB70424.1| putative outer membrane protein [Ruegeria sp. R11]
Length = 190
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/229 (17%), Positives = 62/229 (27%), Gaps = 42/229 (18%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
+S+ +L+ + + E W+G Y+G I +L
Sbjct: 4 IVSMAAIAAALSTPAFAGNLEEPVVEPVPAPVTVVQTGTDWTGAYIGGQIGQLDADTSNG 63
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVV 133
+ + +Y GI G+N FV G A D +
Sbjct: 64 LSGDDVSY--------GIHAGYNYDFGQFVLGGELDYDATDTDLGGATV----DSVARAK 111
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+KAGY +L Y GG G + GIG+ Y V
Sbjct: 112 VKAGYEFGPVLAYVTGGVAQVDTSV-------------------GDETGEFYGIGMAYRV 152
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N ++ D+ +A SL + F
Sbjct: 153 NEQWTVGGEILEHDFD-----------DLGGSGISADATTVSLRASYRF 190
>gi|46205164|ref|ZP_00048920.2| COG3637: Opacity protein and related surface antigens
[Magnetospirillum magnetotacticum MS-1]
Length = 313
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 44/148 (29%), Gaps = 17/148 (11%)
Query: 104 FGINCHTTAAK----------------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
+G+ + D F ++EK ++G + GY+ + LIY
Sbjct: 2 YGLEADLAGSNLKRGVRSDVQGFGYEAIDPPFALIREKTDLFGSARARLGYAFGNNLIYA 61
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G GA + + A D LG G+ + V+ +SL YRY
Sbjct: 62 TLGLSGANGRVLA-TYPDLAGGATATAARDVSYLGFTLGAGVQFAVDPHLSLGLDYRYSD 120
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+E S
Sbjct: 121 LGESRRFGLGPLPGLEGGPVTTRTGFVS 148
>gi|170738855|ref|YP_001767510.1| porin [Methylobacterium sp. 4-46]
gi|168193129|gb|ACA15076.1| porin [Methylobacterium sp. 4-46]
Length = 279
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 72/291 (24%), Gaps = 78/291 (26%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
L+I V + A DL + W+G VG ++ + T
Sbjct: 6 LSSALLAIAVAGPACAADL---------PRRVQPPSFTPVPVFTWTGFSVGGNVGYAFTT 56
Query: 70 -----------------HPLADTINRKTYNSLLPNGLGIELGHNIQLED---FVFGINCH 109
+ T G G+++G N Q+ V G+
Sbjct: 57 RESRNRNAAFLIDDRAIGTVGGTFGFSNRGQNGFTG-GLQVGANYQMTPGSGVVVGVEAD 115
Query: 110 TTAAKDDSTFYRL-------------------KEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ +G + GY+ D L+Y GG
Sbjct: 116 AQYLDAGRRRSGVLAGPNTVLNPNAIFFDPRATAGLEYFGTARGRLGYAFDRTLVYATGG 175
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD----------ISLS 200
F + + +G G++Y + D ++L
Sbjct: 176 FAYGGGSARRFFGATDNAQM---------RTGWTVG-GVEYALGRDSFLNVFGASAVTLK 225
Query: 201 ASYRYIPH----HIHSVNNSNAKSDV-----ERVDRKGNAHIASLGINMHF 242
Y+ + + DV R + + G+N F
Sbjct: 226 LEGLYVNLARNGGASLLAVNTGTGDVFLRTPGRRALGDDFMVLRSGLNYTF 276
>gi|307294323|ref|ZP_07574167.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1]
gi|306880474|gb|EFN11691.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1]
Length = 217
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 64/184 (34%), Gaps = 18/184 (9%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
D N + S+ G+ G+++ L V G+ T + S+ +++
Sbjct: 43 GAGSSVDNDNDRDDQSIDGLLYGVGAGYDVNLGSAVIGVEGEYTDSTAKSSRTDFTDQFG 102
Query: 128 IYGDVV--------LKAG-YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+G V +AG + + L+Y GG+ + + + N + +
Sbjct: 103 -FGRVKQGRDLYVGARAGILASPNTLVYVKGGYTNTKLDVLAGDT-------NQETDTNF 154
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+G G++ +N + YRY + ++ +N + + + H +
Sbjct: 155 KLDGWRIGGGVERAINANSFAKLEYRYSKYEDAHIDFANG-ASSDEFGIDTDRHQVVASV 213
Query: 239 NMHF 242
F
Sbjct: 214 GWRF 217
>gi|188584143|ref|YP_001927588.1| porin [Methylobacterium populi BJ001]
gi|179347641|gb|ACB83053.1| porin [Methylobacterium populi BJ001]
Length = 302
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 66/272 (24%), Gaps = 95/272 (34%)
Query: 54 WSGNYVGLHISRLYET------------------HPLADTINRKTYNSLLPNGL--GIEL 93
W+G Y G + + P+ N +G G ++
Sbjct: 40 WTGFYAGFNAGYGFGVEDSLAPTQVVTIDRRVVGGPVGAIAGFAFDNGGRSDGFVGGGQI 99
Query: 94 GHNIQLED---FVFGINCHTTAAKDDSTFYRLKE-------------------------- 124
G+N Q V GI A F R
Sbjct: 100 GYNYQFTPGSGVVIGIEADAQYADLGGRFGRNGLCGTGGIACAVTPGAFVQPGVTLINPT 159
Query: 125 ---KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+G V + GY+ D +L YG GGF D +
Sbjct: 160 GLQGLDFFGTVRGRIGYAFDRVLFYGTGGFAYGSFGGGRAV------------DTDDFKT 207
Query: 182 SVVLGIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSNAKSDVE-------- 223
G G++Y + + +++ Y+ ++ A ++
Sbjct: 208 GYAAGGGVEYALPTDSFLNFFRSSAVTIKVEGLYVNFDGNNSRYGFANANGTIVTATPLT 267
Query: 224 -------------RVDRKGNAHIASLGINMHF 242
R + + G+N F
Sbjct: 268 AAGPISPSTILNNTARRDNDFAVIRAGLNYKF 299
>gi|306841354|ref|ZP_07474060.1| outer surface protein [Brucella sp. BO2]
gi|306288594|gb|EFM59937.1| outer surface protein [Brucella sp. BO2]
Length = 284
Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 82/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 6 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 54
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 55 KSKTGGKWDFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 114
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 115 ASINGRTNCPSYVKSTHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPHVGPLTPYLGAG 174
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 175 IGAAYVKYDTWKTSEICPGCTFQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 234
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 235 VNGGNAYGYDEHDRQIINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 283
>gi|89070001|ref|ZP_01157333.1| possible outer membrane protein [Oceanicola granulosus HTCC2516]
gi|89044449|gb|EAR50580.1| possible outer membrane protein [Oceanicola granulosus HTCC2516]
Length = 200
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 51/216 (23%), Gaps = 38/216 (17%)
Query: 27 DLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLP 86
D P+ + WSG Y G+ + +
Sbjct: 23 DTTAPQPVLTSPAPAPAPVTM--ATRDWSGAYGGVQLGYGQTDGDVF-------AEEEEG 73
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
G +G+ V G D T L+ GY + L Y
Sbjct: 74 ALYGGFVGYQRDFGSIVAGAELD--YLGTDITNDATGTDIDSLARAKLRVGYDAGNFLPY 131
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
GG+ N G + G+G DYMV I++
Sbjct: 132 ATGGYA----------------MANTSGGLEADADGYFYGVGADYMVTDRIAVGGE---- 171
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D + AS ++ F
Sbjct: 172 -------ITKNEFEDFDGSGDDFGMTTASARVSFRF 200
>gi|254497414|ref|ZP_05110213.1| putative outer-membrane immunogenic protein precursor [Legionella
drancourtii LLAP12]
gi|254353370|gb|EET12106.1| putative outer-membrane immunogenic protein precursor [Legionella
drancourtii LLAP12]
Length = 319
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 69/263 (26%), Gaps = 73/263 (27%)
Query: 53 IWSGNYVGLHISRLYETHP---------------------------LADTINRKTYNSLL 85
+W+G Y G+++ + + K+ +
Sbjct: 56 MWNGFYGGINLGGAFSSSDPLLINAHNVQYCPNTMGCSQGLAYATAAVTGTKNKSSLANA 115
Query: 86 PNGLGIELGHNIQLED-FVFGINCHTTAAKDD----------------------STFYRL 122
G +LG N L+ +V G + +T +
Sbjct: 116 GFIGGGQLGFNQTLQSHYVVGFEADIQGISESNRKKWSASAVNFNDNNGDPQIINTNTAI 175
Query: 123 KEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSS---------LEKVESDNSKNA 172
+ G V GY ++ L+ G GGF V + D + +
Sbjct: 176 VQGTDFLGTVRGHLGYLINPAFLLSGTGGFAYGGVRSQTRIIQSYGIPQNTNNLDANWRS 235
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN-------------AK 219
G + +G +M S Y Y + N
Sbjct: 236 VGYYANTRLGWTVGGSFAWMPRPAWSAKIEYLYYNLGSVIYKDGNLINNFITPYGPPYYF 295
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
++ + + H+ +G+N HF
Sbjct: 296 NNAVSSTTRFDGHVVRVGVNYHF 318
>gi|254437354|ref|ZP_05050848.1| hypothetical protein OA307_2224 [Octadecabacter antarcticus 307]
gi|198252800|gb|EDY77114.1| hypothetical protein OA307_2224 [Octadecabacter antarcticus 307]
Length = 197
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 60/221 (27%), Gaps = 29/221 (13%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
L++ V + S A +L P V W+G YVG + +
Sbjct: 6 TTTALTMSVASASFAGNLSEPIIAPSPAAMAAPVYSTG---TDWTGFYVGGSLGYAEGSE 62
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG 130
+ GI G++ +FV G + +
Sbjct: 63 DDSTVFED------DGATYGIHAGYDYDFGNFVLGAELELSGFDVSDGGNDI----DSVS 112
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
L+AGY + L Y G + G D + + G+G+D
Sbjct: 113 RAKLRAGYDAGAFLPYLTVGVASLDI----------------GGGLDANDTGSFYGVGMD 156
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
YM+N I L + ++ V
Sbjct: 157 YMLNDRIRLGGEVLQHEFGNFDNTGLDFEATTASVRVAFQF 197
>gi|146342779|ref|YP_001207827.1| putative outer membrane protein (OMPA-like), hemin-binding protein
[Bradyrhizobium sp. ORS278]
gi|146195585|emb|CAL79612.1| conserved hypothetical protein; putative outer membrane protein
(OMPA-like), hemin-binding protein [Bradyrhizobium sp.
ORS278]
Length = 266
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 67/281 (23%), Gaps = 79/281 (28%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINR-- 78
+ + A DL DL + E + W G Y G+ + +
Sbjct: 6 SVAQAADL-----SDLPILRGSMTEGLNSSRVNWDGYYAGVQGGYGSSDENFNGSTSTMT 60
Query: 79 ---------------KTYNSLLP------NGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
++N L +G G +G+N Q +D V G+ K
Sbjct: 61 AAVLANTLIESQMQVSSWNMNLGKQSSRSSGFGGFVGYNSQWDDVVLGVEASYLHGKFGG 120
Query: 118 TFYRLKE-----------------------KYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+ + +AGY++ L Y G
Sbjct: 121 MTSSTRALVSGTALTDGNYHSVTSTQSSQISIKDMATIRGRAGYALGCFLPYAFFGLALG 180
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHG-------------SSVVLGIGLDYMVNYDISLSA 201
V+ S G + G+G+D + + A
Sbjct: 181 NADIGQTVTVQDSVSATQLGAYTALQPLSANNIQHNHLIYGYSAGLGVDVNLVGGLFARA 240
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y YI + + G+ F
Sbjct: 241 EYEYIRFTST---------------VDTSVNTVRAGLGYKF 266
>gi|149914031|ref|ZP_01902563.1| hypothetical protein RAZWK3B_18548 [Roseobacter sp. AzwK-3b]
gi|149812315|gb|EDM72146.1| hypothetical protein RAZWK3B_18548 [Roseobacter sp. AzwK-3b]
Length = 189
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 51/198 (25%), Gaps = 30/198 (15%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+ +LA P W+G YVG I +
Sbjct: 3 ALALATGPALAGSATPPEP---DPVISTPAPPPAPSSPDWTGPYVGGQIG--WGNVDTNL 57
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
G+ G++ +V G A + V
Sbjct: 58 PGVSGDD-----VIGGLIAGYDYDFGQWVVGGGLDYDWADIGLGAGNPTLEN--VFRVKA 110
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ GY + + L+YG GG+ A G +G G ++MV
Sbjct: 111 RGGYKIGNGLLYGTGGWAQADTSTL------------------GDDDGYFIGAGYEHMVT 152
Query: 195 YDISLSASYRYIPHHIHS 212
++SL Y +
Sbjct: 153 PNVSLGGEVLYHEFDNFN 170
>gi|90425585|ref|YP_533955.1| hypothetical protein RPC_4110 [Rhodopseudomonas palustris BisB18]
gi|90107599|gb|ABD89636.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 274
Score = 75.6 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 59/253 (23%), Gaps = 79/253 (31%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINR-----------------KTYNSLL-----PNGLG 90
W G Y+G S D + +L G G
Sbjct: 38 NWEGFYIGGQASYGTSDMNFTDATRGLAEQAMTNTLVNSAMQVSDWPTLGKQSAHGQGYG 97
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDSTFYRL------------------------KEKY 126
+G+N Q D V G+ + K D + +
Sbjct: 98 GFVGYNWQWTDVVLGLEANYIHGKFDGSDSNVANPMTRCMGLSDSLYHCAGYRSAASIVI 157
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV-- 184
G +AG+SV S L Y GG + D A G
Sbjct: 158 NDLGSARARAGWSVGSFLPYMFGGVSLGQADIVRSASI-RDTLYTASPALGGTYVGYNQF 216
Query: 185 ---------------LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G+G+D MV + + A + Y+
Sbjct: 217 DRAKVQNGHFIYGYGGGLGVDMMVFGGLFVRAEWEYLKFA---------------APVDT 261
Query: 230 NAHIASLGINMHF 242
+ G+ F
Sbjct: 262 SVSTVRAGVGYKF 274
>gi|306846131|ref|ZP_07478693.1| outer surface protein [Brucella sp. BO1]
gi|306273382|gb|EFM55243.1| outer surface protein [Brucella sp. BO1]
Length = 284
Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 82/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 6 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 54
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 55 KSKTGGKWDFWNQYEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 114
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 115 ASINGRTNCPSYVKSTHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPHVGPLTPYLGAG 174
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 175 IGAAYVKYDTWKTSEICPGCTFQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 234
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 235 VNGGNAYGYDEHDRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 283
>gi|39937375|ref|NP_949651.1| hypothetical protein RPA4315 [Rhodopseudomonas palustris CGA009]
gi|39651233|emb|CAE29756.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 275
Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 57/245 (23%), Gaps = 63/245 (25%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLL-------------------- 85
+ W G YVG ++ N L+
Sbjct: 46 VETPRVINWEGFYVGGQGGYGTSDMDFTNSTQGIVSNLLVNTAVQGALGVSSWPVLGKSS 105
Query: 86 --PNGLGIELGHNIQLEDFVFGINCHTTAAKDDST--------------------FYRLK 123
G G +G+N Q +D V GI + +
Sbjct: 106 SHGQGWGGFVGYNAQWDDVVLGIEANYMHGNFGGSTSGSMARQISSGGVNYGAIYGASAG 165
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN------SKNAKGRFD 177
G L+AGY+ S L Y GG V + ++ +
Sbjct: 166 INVHDVGSARLRAGYAFGSFLPYAFGGVALGQADIVQSASVIGTDAGGTWVLSGSQVQNS 225
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G+G+D M+ + + A + Y G
Sbjct: 226 HFIYGYSGGVGMDMMLYRGLFVRAEWEYQKFA---------------APINTAVSTVRGG 270
Query: 238 INMHF 242
I F
Sbjct: 271 IGYKF 275
>gi|254720216|ref|ZP_05182027.1| heat resistant agglutinin 1 precursor [Brucella sp. 83/13]
gi|265985226|ref|ZP_06097961.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306838642|ref|ZP_07471478.1| outer surface protein [Brucella sp. NF 2653]
gi|264663818|gb|EEZ34079.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306406285|gb|EFM62528.1| outer surface protein [Brucella sp. NF 2653]
Length = 284
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 83/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 6 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 54
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 55 KSKTGGKWDFWNQYEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 114
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 115 ASINGRTNCPSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 174
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 175 IGAAYVKYDTWKTSEICPGCSFQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 234
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 235 VNGGNAYGYDEHDRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 283
>gi|77404769|ref|YP_345342.1| putative outer membrane protein [Rhodobacter sphaeroides 2.4.1]
gi|77390419|gb|ABA81601.1| putative outer membrane protein [Rhodobacter sphaeroides 2.4.1]
Length = 250
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 60/214 (28%), Gaps = 28/214 (13%)
Query: 51 YGIWSGNYVGLHISRLYETHPLA---------DTINRKTYNSLLPNGLGIELGHNIQLED 101
WSG ++G + + ++ L +E G+ L
Sbjct: 43 TYDWSGFWIGGGLGYGSTNYDISGDADLAEGQSGALELPDLGGQGGLLSLEAGYAYALAP 102
Query: 102 -FVFGINCHTTAAKDDSTF-----------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGM 148
++ D+ K + GY D+ +IYG+
Sbjct: 103 RWILAGQLDYAFGNIDNDADLSLDGELSLDASYDIKVKSMMAGTARLGYLPSDTTMIYGL 162
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
G A G +D + + +G G++ + I L YRY
Sbjct: 163 AGLTRAKFEADYSVS------GVTSGGYDFSDTGLTIGAGMETRLTEKIGLKLEYRYTKF 216
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ + N + + A+ + F
Sbjct: 217 DDYTIFDGNVAGADVKASSDTSIQSATASLTYRF 250
>gi|256058915|ref|ZP_05449129.1| heat resistant agglutinin 1 precursor [Brucella neotomae 5K33]
gi|261322852|ref|ZP_05962049.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261298832|gb|EEY02329.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 284
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 81/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR-- 65
A+ ++ I + + A DL + + +G Y+ I
Sbjct: 6 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNL 54
Query: 66 ---------LYETHP-----LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
+ + DT N ++ G+ +G+ L+ F
Sbjct: 55 KSKTGGKWDFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 114
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 115 ASINGRTNCPSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 174
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 175 IGAAYVKYDTWKTSEICPTCTLQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 234
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N H G+ F
Sbjct: 235 VNGGNTYGYDEQDRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 283
>gi|255264827|ref|ZP_05344169.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255107162|gb|EET49836.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 203
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 62/212 (29%), Gaps = 34/212 (16%)
Query: 32 RKIDLFNEADNNVEYQDDEYG-IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG 90
+ ++ + YG W+G Y G+ + + + N G
Sbjct: 25 EQAEIDPMVETVTMAPAPTYGRDWTGGYAGIQLGLG----QVDVDPDGADLNG-DGALYG 79
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ G+ L +V G + +ST L K + + GY ++L Y G
Sbjct: 80 VHAGYMYDLGRYVLGGELDYDLTEIEST--ELAGKVDSVLRLKGRVGYDAGAILPYMTAG 137
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
F D++L V+ G+G Y + I +
Sbjct: 138 FAQTDASDTALGGVDD---------------GYFFGVGAVYAMRDTILVGGEVLQHSFD- 181
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D + +A A+ ++ F
Sbjct: 182 ----------DFDGTGFDVDAMTATARVSFKF 203
>gi|170745394|ref|YP_001766851.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170658995|gb|ACB28049.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 288
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/272 (13%), Positives = 70/272 (25%), Gaps = 72/272 (26%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT------------------I 76
DL A + W+G YVG++ ++ + T +
Sbjct: 22 DLPRRAVPPPVFTPVPVFTWTGFYVGVNAGYGFDANSRNTTNYALRGGTLANSPDTNAVV 81
Query: 77 NRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFYRL----------- 122
+ +S G ++G+N QL V G
Sbjct: 82 SVNNRSSNNGFSGGAQIGYNWQLTPGSGIVVGFEADAQYVDFARRANGTLNYGLAGTPGF 141
Query: 123 ------------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+G + GY+ D L+YG GG+ D D +
Sbjct: 142 AFSAPRAYVATSGNGLDYFGTARGRLGYAFDRTLVYGTGGYAYGSGQD--------DQNF 193
Query: 171 NAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSN--- 217
+ + +G G++Y + + ++L Y+ S
Sbjct: 194 AGRNFRSSFRNGYAVGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRQKNTASGVFI 253
Query: 218 -------AKSDVERVDRKGNAHIASLGINMHF 242
+ + + G+N F
Sbjct: 254 PNLLPPRGVAYLNGAAANTEFAVVRAGLNYKF 285
>gi|153008778|ref|YP_001369993.1| outer surface protein [Ochrobactrum anthropi ATCC 49188]
gi|151560666|gb|ABS14164.1| outer surface protein [Ochrobactrum anthropi ATCC 49188]
Length = 285
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/254 (15%), Positives = 70/254 (27%), Gaps = 55/254 (21%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHP----------------LADTINRKTYNSLLPN 87
V E SG Y+ + +++ + DT+ ++
Sbjct: 31 VIEPMPEPVNSSGWYIRGDLGYNFKSSTDGDWSFWNQFDPPYRGIDDTLRYDDFDLKAGA 90
Query: 88 GLGIELGHNIQ--------LEDFVFGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKA 136
G+ +G+ L+ F GIN T + K F +++
Sbjct: 91 TYGVGVGYRFTDMFRADATLDFFRAGINGRTACPSYVKSAKGFNPVEDNCNYEDSSTANI 150
Query: 137 GYSV----------DSLLIYGMGGFGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSV 183
++ + Y G G AYV + E + K D ++
Sbjct: 151 WTAMANAYVDLPRVGPVTPYLGAGLGAAYVQYDDWKTHEVCAGCTYSSEKDGLDSWRFAM 210
Query: 184 VLGIGLDYMVNYDISLSASYRYI-------------PHHIHSVNNSNAKSDVERV--DRK 228
L G+ Y + + L YRY+ + N+ D
Sbjct: 211 ALMAGVSYDLTEQLKLDVGYRYMRINGGKAYGFDAADRSTNPYGNAEGPGATGTQAKDNG 270
Query: 229 GNAHIASLGINMHF 242
N H G+ F
Sbjct: 271 FNMHTIRAGLRYEF 284
>gi|323137766|ref|ZP_08072842.1| porin [Methylocystis sp. ATCC 49242]
gi|322397063|gb|EFX99588.1| porin [Methylocystis sp. ATCC 49242]
Length = 337
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 68/288 (23%), Gaps = 98/288 (34%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSL---------------------------- 84
+W+G Y GL+ + A T+
Sbjct: 39 MWTGFYAGLNAGYGFGLSSNATTVGNAYDQYYTSYFNQPGWPPLLVAGYGGLMAANSGNA 98
Query: 85 ----LPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFY------------------- 120
G ++G+N Q V G+ + +
Sbjct: 99 SLNQNGFIGGGQIGYNYQWSPTIVIGVEADMQGSAIRGSGGYTGVGQDLYSMGRMMLMPH 158
Query: 121 ---------RLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD--- 167
++ +G V + GY V L ++G GG + S
Sbjct: 159 GTRNSVGGGTIQAGLDWFGTVRGRVGYLVTPTLLVFGTGGLTYGGAWANGNYTSTSAWCG 218
Query: 168 ----------------NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
GR G G ++M + SL A Y
Sbjct: 219 TPTDACYGGMITTPYSQIAVGSGRTSSTLVGWNAGGGFEWMFMPNWSLKAEAFYYDLGSM 278
Query: 212 SVN-----------------NSNAKSDVERVDRKGNAHIASLGINMHF 242
++N +A+ + + IA GIN HF
Sbjct: 279 NLNGSAVAAVSNVAAHMGRAVPDAQMIFPTTRVRYDGVIARAGINYHF 326
>gi|325919158|ref|ZP_08181215.1| opacity protein [Xanthomonas gardneri ATCC 19865]
gi|325550365|gb|EGD21162.1| opacity protein [Xanthomonas gardneri ATCC 19865]
Length = 279
Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/211 (13%), Positives = 56/211 (26%), Gaps = 36/211 (17%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT--------- 110
G P + G LG++ Q ++V+G+
Sbjct: 77 GFCGGAAAGRTPAS-----GCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDLRDSV 131
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESD 167
+A FY + + + GY+ L Y G S ++
Sbjct: 132 SAFSTTPAFYTFTRQLNRTAALRGRIGYAFGEQGDFLAYFTAGVARGEFDHSFSSSNTAN 191
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS------- 220
+ ++ G G+GL ++ ++S+ Y +
Sbjct: 192 SFTSSGGD---SADGYQAGVGLQRRLSDNVSVGVEYLFTRLEDEDTRVRVGPGTAPATNP 248
Query: 221 ---------DVERVDRKGNAHIASLGINMHF 242
D+ R D +A+ L F
Sbjct: 249 FLRVNPAGTDLRRTDTDFSANAVRLTATYRF 279
>gi|328542550|ref|YP_004302659.1| Porin subfamily [polymorphum gilvum SL003B-26A1]
gi|326412296|gb|ADZ69359.1| Porin subfamily [Polymorphum gilvum SL003B-26A1]
Length = 276
Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 74/255 (29%), Gaps = 35/255 (13%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR---- 65
+ +++ V A D+ P + G Y+ I
Sbjct: 13 LSLAGVAMAVSTAVFAADMPAPIIEHIPEVPAVG------------GWYLRGDIGYKLYE 60
Query: 66 ---LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-------TAAKD 115
P+ + ++ +G +G+ + F + A
Sbjct: 61 EPKGSFNDPVVGNLRFRSNELDDAWMIGAGVGYKFT-DYFRADLTVDYETPAGYKGLAPC 119
Query: 116 DSTFYRLKEKYFIYGDVVLKA-GY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
F + + GY + ++ Y G G A+V S+++ +
Sbjct: 120 APCFGSYSVETADIDVWTVMLNGYVDIGTWYNITPYVGAGIGAAWVNVSNVKSTNPGAAT 179
Query: 171 NAK-GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI-HSVNNSNAKSDVERVDR- 227
+ G + L G Y V + S+ A YRY SV N + RV
Sbjct: 180 TSYDGSHSQWNLAWALMAGASYAVTPNWSIDAGYRYKNLGDAKSVKLHNVGTGQSRVKYK 239
Query: 228 KGNAHIASLGINMHF 242
AH LG+ +F
Sbjct: 240 DLTAHEIRLGVRYNF 254
>gi|294011267|ref|YP_003544727.1| putative outer membrane protein [Sphingobium japonicum UT26S]
gi|292674597|dbj|BAI96115.1| putative outer membrane protein [Sphingobium japonicum UT26S]
Length = 217
Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 69/220 (31%), Gaps = 17/220 (7%)
Query: 32 RKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL-YETHPLADTINRKTYNSLLPNGLG 90
L A ++ D ++G V + D N + S+ G
Sbjct: 6 AATLLTGAAVSSPALAQDVNPTFTGPRVEAILGYDHTGAGSSVDNDNDRDDQSIDGLLYG 65
Query: 91 IELGHNIQLEDFVFGINCHTT-------AAKDDSTFYRLKEKYFIYGDVVLKAG-YSVDS 142
+ G+++ L V G+ T + F + K V +AG + +
Sbjct: 66 VGAGYDVNLGSAVVGVEGEFTDSTAKSGRSDPTDQFGFGRVKQGRDLYVGARAGILASPN 125
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+Y GG+ + + N + + +G G++ +N +
Sbjct: 126 TLVYVKGGYTNTKLDVLAGNT-------NVETDTNFKLDGWRIGAGVERAINANTFAKLE 178
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YRY + ++ ++ + + + H + F
Sbjct: 179 YRYSKYEDAHIDFADG-TTTDEFGIDTDRHQIVASLGWRF 217
>gi|307300477|ref|ZP_07580257.1| porin opacity type [Sinorhizobium meliloti BL225C]
gi|307318342|ref|ZP_07597777.1| porin opacity type [Sinorhizobium meliloti AK83]
gi|306896024|gb|EFN26775.1| porin opacity type [Sinorhizobium meliloti AK83]
gi|306904643|gb|EFN35227.1| porin opacity type [Sinorhizobium meliloti BL225C]
Length = 291
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/267 (13%), Positives = 68/267 (25%), Gaps = 38/267 (14%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
G +F V +++ A D+Y P F E V SG Y+ +
Sbjct: 16 GMKKIFRGVAAALLSGTPVYAADVYQPPVEAPFVEQPVEVVEA-------SGWYLRGDVG 68
Query: 65 RLYETHPLADTINRKTYNSLLP------NGLGIELGHNIQLEDFV-------FGINCHTT 111
+ A N + + + G Q+ ++ +
Sbjct: 69 YAWNDLRGAHYFQGSNSNLVDFDRADVDDSYVLGGGVGYQINSYLRADVTLDYLGESDFN 128
Query: 112 AAKDDSTFYRLKEKYFIYGDVVL---------KAGYSVDSLLIYGMGGFGGAYVIDSSL- 161
+ + + G + + Y G GG V +L
Sbjct: 129 GSTSGGCGVAVNCVSNDVASMSAWSLLANAYVDLG-TYGAFTPYVGAGIGGTRVKWGTLR 187
Query: 162 ------EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ + + L G + ++ YR+ + ++
Sbjct: 188 NTSCDVTDPSNCDPTIEHKGESDWRFTYALMAGTSVDLTCNLKADVGYRFRHINGGNMFG 247
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
N S D+ H A G+ F
Sbjct: 248 YNLNSG-PAYDKDIYVHEARAGLRYSF 273
>gi|94497477|ref|ZP_01304047.1| outer membrane protein-like [Sphingomonas sp. SKA58]
gi|94423108|gb|EAT08139.1| outer membrane protein-like [Sphingomonas sp. SKA58]
Length = 217
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/182 (13%), Positives = 55/182 (30%), Gaps = 6/182 (3%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR 121
H+ + D N + S+ GI G+++ L V G+ T + S Y
Sbjct: 41 HVGAGSDV----DNNNGRDDQSIDGLLYGIGAGYDVNLGSAVVGVEGEWTDSTAKSDRYD 96
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
L +++ + Y I ++ + + +
Sbjct: 97 LTDQFGFGRVSQGRDLYIGARAGILANPATLVYVKGGYTNSKLNILAGNTDETTDRSFKL 156
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+G G++ +N + YRY + ++ + + D + H +
Sbjct: 157 DGWRIGAGVERAINTNTFAKLEYRYSNYTDAHIDYMDGATSA-DFDVDTDRHQVVASVGW 215
Query: 241 HF 242
F
Sbjct: 216 RF 217
>gi|163853385|ref|YP_001641428.1| porin [Methylobacterium extorquens PA1]
gi|218532243|ref|YP_002423059.1| porin [Methylobacterium chloromethanicum CM4]
gi|240140802|ref|YP_002965282.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
gi|254563312|ref|YP_003070407.1| outer-membrane immunogenic protein [Methylobacterium extorquens
DM4]
gi|163664990|gb|ABY32357.1| porin [Methylobacterium extorquens PA1]
gi|218524546|gb|ACK85131.1| porin [Methylobacterium chloromethanicum CM4]
gi|240010779|gb|ACS42005.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
gi|254270590|emb|CAX26593.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens DM4]
Length = 288
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 63/273 (23%), Gaps = 74/273 (27%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI------------------ 76
DL A +Q W+G Y G + + T
Sbjct: 22 DLPRRAAPPPVFQPVPVFTWTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGTTAV 81
Query: 77 -NRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFY------------ 120
S G ++G+N Q V G+ A
Sbjct: 82 VAFSNRESNEGFVGGGQIGYNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQ 141
Query: 121 ----RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+G V + GY+ D L+YG GGF
Sbjct: 142 VFNPGGLSGLDFFGTVRGRLGYAFDRTLVYGTGGFAYGSGGGREFGT---------GVSS 192
Query: 177 DGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ + G G++Y + + ++L Y+ + +D +
Sbjct: 193 NDFQTGWAAGGGIEYALPTDSFLNFFKSSAVTLKVEGLYVNLDRGTGGRGAFATDNQGRT 252
Query: 227 R-----------------KGNAHIASLGINMHF 242
+ G+N F
Sbjct: 253 VSIGSPGTVLVSGGQQVRDTEFAVVRAGLNYKF 285
>gi|163850612|ref|YP_001638655.1| porin [Methylobacterium extorquens PA1]
gi|218529335|ref|YP_002420151.1| porin [Methylobacterium chloromethanicum CM4]
gi|240137660|ref|YP_002962131.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
gi|163662217|gb|ABY29584.1| porin [Methylobacterium extorquens PA1]
gi|218521638|gb|ACK82223.1| porin [Methylobacterium chloromethanicum CM4]
gi|240007628|gb|ACS38854.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
Length = 289
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 63/275 (22%), Gaps = 74/275 (26%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI---------------- 76
DL A +Q W+G Y G + + T
Sbjct: 21 AADLPRRAAPPPVFQPVPVFTWTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGTT 80
Query: 77 ---NRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFY---------- 120
S G ++G+N Q V G+ A
Sbjct: 81 AVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAA 140
Query: 121 ------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+G V + GY+ D L+YG GGF
Sbjct: 141 QQVFNPGGLSGLDFFGTVRGRLGYAFDRTLVYGTGGFAYGSGGGREFGT---------GV 191
Query: 175 RFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + G G++Y + + ++L Y+ + +D +
Sbjct: 192 SSNDFQTGWAAGGGIEYALPTDSFLNFFKSSAVTLKVEGLYVNLDRGTGGRGAFATDNQG 251
Query: 225 VDR-----------------KGNAHIASLGINMHF 242
+ G+N F
Sbjct: 252 RTVSIGSPGTVLVSGGQQVRDTEFAVVRAGLNYKF 286
>gi|260574728|ref|ZP_05842731.1| putative outer membrane protein [Rhodobacter sp. SW2]
gi|259023145|gb|EEW26438.1| putative outer membrane protein [Rhodobacter sp. SW2]
Length = 213
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 63/199 (31%), Gaps = 25/199 (12%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
V+ WSG Y GL + + + +G+ +Q + V
Sbjct: 40 VQTVQQPTADWSGFYAGLGYGVSSGDIDFTNPDVANKLDD--GHAASAFVGYLVQRDALV 97
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
+G T + T ++ D+ K GY+ + L YG+ G+ A
Sbjct: 98 YGAELAYTGLDKN-TVTGFADEIDQTIDLKGKVGYAANRALFYGVLGYSVASFD------ 150
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ V G+G+DY+V +++ Y + + + D
Sbjct: 151 ---------TAGGSWDPAGVNYGLGMDYLVTDRMTVGLEYL-------ARDLTGDNPDGL 194
Query: 224 RVDRKGNAHIASLGINMHF 242
K + SL + F
Sbjct: 195 GQQAKIDLDTVSLRVGFQF 213
>gi|254560231|ref|YP_003067326.1| outer-membrane immunogenic protein [Methylobacterium extorquens
DM4]
gi|254267509|emb|CAX23351.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens DM4]
Length = 289
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 63/275 (22%), Gaps = 74/275 (26%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI---------------- 76
DL A +Q W+G Y G + + T
Sbjct: 21 AADLPRRAAPPPVFQPVPVFTWTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGTT 80
Query: 77 ---NRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFY---------- 120
S G ++G+N Q V G+ A
Sbjct: 81 AVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAA 140
Query: 121 ------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+G V + GY+ D L+YG GGF
Sbjct: 141 QQVFNPGGLSGLDFFGTVRGRLGYAFDRTLVYGTGGFAYGSGGGREFGT---------GV 191
Query: 175 RFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + G G++Y + + ++L Y+ + +D +
Sbjct: 192 SSNDFQTGWAAGGGIEYALPTDSFLNFFKSSAVTLKVEGLYVNLDRGTGGRGAFATDNQG 251
Query: 225 VDR-----------------KGNAHIASLGINMHF 242
+ G+N F
Sbjct: 252 RTVSIGNPGTVLVSGGQQVRDTEFAVVRAGLNYKF 286
>gi|163743239|ref|ZP_02150620.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10]
gi|161383427|gb|EDQ07815.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10]
Length = 194
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 57/220 (25%), Gaps = 35/220 (15%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEY------GIWSGNYVGLHISRLYETHP 71
+V ++A L P E G W+G Y+G I +L
Sbjct: 4 IVSMAAIAAALSTPAFAGNLEEPVVAPAPAAPPVVVANDGGDWTGAYIGGQIGQLDADTS 63
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
+ + +Y G+ G+N FV G A D + G
Sbjct: 64 NGLSGDDVSY--------GVHAGYNYDFGRFVLGGEIDYDATDVDLGGGAATVDSVMRGK 115
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
V GY +L Y GG G + GIG+ Y
Sbjct: 116 VKA--GYDFGPVLAYVTGGVAQVDTSV-------------------GDETGEFYGIGVAY 154
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
V ++ + +A + +
Sbjct: 155 RVTDQWTVGGEVLEHDFDNLGSSGISADATTVSLRASYQF 194
>gi|150397819|ref|YP_001328286.1| porin opacity type [Sinorhizobium medicae WSM419]
gi|150029334|gb|ABR61451.1| porin opacity type [Sinorhizobium medicae WSM419]
Length = 275
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/265 (12%), Positives = 67/265 (25%), Gaps = 38/265 (14%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+F V +++ A D+Y P F E V SG Y+ +
Sbjct: 2 KKIFRGVAAALLSGTPVYAADVYQPPVEAPFVEQPVEVVQS-------SGWYLRGDVGYA 54
Query: 67 YETHPLADTINRKTYNSLLP------NGLGIELGHNIQLEDFV-------FGINCHTTAA 113
+ A N + + + G Q+ +++ + +
Sbjct: 55 WNDLRGAHYFQGSNSNLVDFDRADVDDSYVLGGGVGYQINNYLRADLTLDYLGESDFNGS 114
Query: 114 KDDSTFYRLKEKYFIYGDVVL---------KAGYSVDSLLIYGMGGFGGAYVIDSSL--- 161
+ + G + + Y G GG V +L
Sbjct: 115 TTGGCGVAVNCVSNDVASMSAWSLLANAYVDIG-TYGAFTPYVGAGIGGTRVKWGTLRNT 173
Query: 162 ----EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + + L G + ++ YR+ + + N
Sbjct: 174 SCDVTDPSNCDPTVEHKGESDWRFTYALMAGTAVDLTCNLKADVGYRFRHINGGDMFGYN 233
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
S D+ H A G+ F
Sbjct: 234 LNSG-PAYDKDIYVHEARAGLRYSF 257
>gi|188582250|ref|YP_001925695.1| porin [Methylobacterium populi BJ001]
gi|179345748|gb|ACB81160.1| porin [Methylobacterium populi BJ001]
Length = 290
Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 62/275 (22%), Gaps = 74/275 (26%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI---------------- 76
DL A +Q W+G Y G + + T
Sbjct: 22 AADLPRRAAPPPVFQPVPVFTWTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGTT 81
Query: 77 ---NRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFY---------- 120
S G ++G+N Q V GI A
Sbjct: 82 AVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVVIGIEADAQYADFGRDRNRFLSTSPLAA 141
Query: 121 ------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+G V + GY+ D L+YG GGF
Sbjct: 142 QQVFNPGGLSGLDFFGTVRGRLGYAFDRTLVYGTGGFAYGSGGGREFGT---------GV 192
Query: 175 RFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
D + G G++Y + + ++L Y+ + D +
Sbjct: 193 SSDDFQTGWAAGGGIEYALPTDSFLNFFKSSAVTLKVEGLYVNLDRGTGGRGAFAVDNQG 252
Query: 225 VDR-----------------KGNAHIASLGINMHF 242
+ G+N F
Sbjct: 253 RTVSIGSPGTVLVSGGQQVRDTEFAVVRAGLNYKF 287
>gi|163746512|ref|ZP_02153870.1| outer membrane protein, putative [Oceanibulbus indolifex HEL-45]
gi|161380397|gb|EDQ04808.1| outer membrane protein, putative [Oceanibulbus indolifex HEL-45]
Length = 201
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 49/199 (24%), Gaps = 39/199 (19%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+ G W+G Y GL + D + G G++ FV
Sbjct: 42 MPTPVAVDGNWTGFYTGLQVG-------QTDIDSDSGTLDGDDTSYGFHAGYDYDFGKFV 94
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
G D +KAGY + L+Y G A
Sbjct: 95 LGGELDYDKTDIDLGTAGATA--DSVARAKVKAGYDFGNTLVYATAGAARADTSV----- 147
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
G + G+G+ Y V ++ DV
Sbjct: 148 --------------GDETGPFAGLGVTYKVTDRYTVGGEVLQHKFD-----------DVG 182
Query: 224 RVDRKGNAHIASLGINMHF 242
+A SL +M F
Sbjct: 183 GTGDDLDATTISLRGSMRF 201
>gi|148557876|ref|YP_001257842.1| outer surface protein [Brucella ovis ATCC 25840]
gi|148369161|gb|ABQ62033.1| outer surface protein [Brucella ovis ATCC 25840]
Length = 284
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 83/289 (28%), Gaps = 65/289 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+ ++ I + + A DL + + +G Y+ I +
Sbjct: 6 AIAVMICGLITSVSAASAADLIVQEPVFE--------PLPQPAL---AGWYLRGDIGYNF 54
Query: 68 ETHP----------------LADTINRKTYNSLLPNGLGIELGHNI--------QLEDFV 103
++ + DT N ++ G+ +G+ L+ F
Sbjct: 55 KSKTGGKWDFWNQFEEPYRGVDDTFNYDDFSLKGGASYGVGVGYRFNDMLRTDLTLDYFR 114
Query: 104 FGINCHT---TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGG 150
IN T + K +++ + ++ L Y G
Sbjct: 115 ASINGRTNCPSYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAG 174
Query: 151 FGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G AYV + + E + ++ K FD ++ L G+ Y + + L YRY+
Sbjct: 175 IGAAYVKYDTWKTSEICPTCTLQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLR 234
Query: 208 HHIHS--------------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D N + G+ F
Sbjct: 235 VNGGNAYGYDEQDRQVINQYGQGAGADGPQAKDNGFNINTVRAGLRYEF 283
>gi|146278175|ref|YP_001168334.1| hypothetical protein Rsph17025_2139 [Rhodobacter sphaeroides ATCC
17025]
gi|145556416|gb|ABP71029.1| hypothetical protein Rsph17025_2139 [Rhodobacter sphaeroides ATCC
17025]
Length = 197
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 53/188 (28%), Gaps = 28/188 (14%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
WSG YVG + D + G+ G+ V
Sbjct: 36 APVVVAPVTDWSGFYVGGQLGYG-------DVGTEISGLDGNGAIGGVHAGYRYDFGRAV 88
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
G D + + L AG + L+Y G A V + +
Sbjct: 89 VGAEIAYDMTNIDIGD---SAELDNVATLKLMAGGKIGRGLLYATAGGTWADVTSDAGDP 145
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ V GIG DYM+N S+ A + H + +++ +D
Sbjct: 146 DD----------------GYVYGIGYDYMLNDRWSVGAE--LLRHEWDTFDDAGTDADAT 187
Query: 224 RVDRKGNA 231
+ K
Sbjct: 188 TLQAKVGF 195
>gi|152978717|ref|YP_001344346.1| OmpA domain-containing protein [Actinobacillus succinogenes 130Z]
gi|150840440|gb|ABR74411.1| OmpA domain protein transmembrane region-containing protein
[Actinobacillus succinogenes 130Z]
Length = 356
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 62/192 (32%), Gaps = 11/192 (5%)
Query: 57 NYVGLHISRLYETH---PLADTINRKTYNSLLPNGLGIELGHNI-QLEDFVFGINCHTTA 112
Y G + H +AD + G+ G+ I +F
Sbjct: 28 FYAGARVGWSAMHHGVDRIADQFVTDGGLNRNSVTYGVFGGYQILNQNNFGLAAELGYDF 87
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ LK Y + L +YG G + + S +++
Sbjct: 88 FGKTKADAAGYHAAHGA-SLALKPSYEIYPDLDVYGKVGVALVRNMYKAETLSASGDAE- 145
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSNAKSDVERVDRKGN 230
+F+ +S++LG G++Y + +++ Y+++ +A + +
Sbjct: 146 ---KFNKTKASLILGAGVEYAILPELAARLEYQWLSKAGNLDSALEDAGYNGTNARYSPD 202
Query: 231 AHIASLGINMHF 242
H + G++ F
Sbjct: 203 IHSVTAGLSYRF 214
>gi|209964175|ref|YP_002297090.1| OmpA family protein (probable proton motor MotY) [Rhodospirillum
centenum SW]
gi|209957641|gb|ACI98277.1| OmpA family protein (probable proton motor MotY) [Rhodospirillum
centenum SW]
Length = 356
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 61/196 (31%), Gaps = 13/196 (6%)
Query: 56 GNYVGLHISRLYET-HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
G Y+G+ + + + R L +E G+ + G+ + +
Sbjct: 27 GPYLGVQGGYTWAKDIEASLSTVRNDIELKDGYTLLVEGGYRLGNG-IRAGVEIGRSEST 85
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
L + GDV ++ +L Y G + S +A
Sbjct: 86 IGDIAGGLPGRAGGAGDVSA---WTFMGVLYYEFAGMSRFRPYLGVGAGMASVGLNDAGE 142
Query: 175 --------RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D + L G+ Y ++ + L+ YR++ + + A VD
Sbjct: 143 LFAPGLIVDEDDRAVAWQLAAGVSYALSPTLDLTLGYRFLDTGTVKIRAAGAGLGSAPVD 202
Query: 227 RKGNAHIASLGINMHF 242
+H A +G+ F
Sbjct: 203 FDYQSHTALVGLRWTF 218
>gi|83942577|ref|ZP_00955038.1| outer membrane protein, putative [Sulfitobacter sp. EE-36]
gi|83846670|gb|EAP84546.1| outer membrane protein, putative [Sulfitobacter sp. EE-36]
Length = 202
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 61/216 (28%), Gaps = 31/216 (14%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYG-IWSGNYVGLHISRLYETHPLAD 74
+ V+ + + A Y + E + G W+G Y GL +
Sbjct: 10 AAVLASTAFAGATYAGSLAEPVVEPVMTAPVPAPDLGGDWTGFYTGLQLGYSDAEVDNGL 69
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD--DSTFYRLKEKYFIYGDV 132
+ +Y G G+N FV G D +
Sbjct: 70 EGDNGSY--------GFHAGYNYDFGRFVLGGELDYDKTDIDLDDAAGVTQGSIDSVARA 121
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
+K GY + S LIY GG+ A G GIG+DY
Sbjct: 122 KIKGGYDLGSTLIYATGGYARADTSL-------------------GDEDGAFYGIGMDYK 162
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ S+ A + S +DV + +
Sbjct: 163 ITEQYSVGAELLEHKFDDVN-GVSGDDADVTTFNIR 197
>gi|85704833|ref|ZP_01035934.1| possible outer membrane protein [Roseovarius sp. 217]
gi|85670651|gb|EAQ25511.1| possible outer membrane protein [Roseovarius sp. 217]
Length = 197
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 51/195 (26%), Gaps = 29/195 (14%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
V W+G Y G I A G+ G++
Sbjct: 31 PVIATPVAPPAPTSPNWTGFYGGGQIGYGDVDTSAAGVEG-------DGLIGGVIAGYDY 83
Query: 98 QLED-FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ +V G A D +AGY + + L+YG GG+ A
Sbjct: 84 DFGNNWVVGAGLDYDFADIDLGGA---ASLEEVFRAKARAGYKIGNGLLYGTGGYAWADT 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +G G ++MV ++SL Y + +
Sbjct: 141 DTFGDDDG------------------YFVGAGYEHMVTENVSLGGEVLYHQFDDFGTSGA 182
Query: 217 NAKSDVERVDRKGNA 231
+ + +
Sbjct: 183 DVDATTVQARASFRF 197
>gi|220922032|ref|YP_002497333.1| porin [Methylobacterium nodulans ORS 2060]
gi|219946638|gb|ACL57030.1| porin [Methylobacterium nodulans ORS 2060]
Length = 294
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 64/260 (24%), Gaps = 81/260 (31%)
Query: 54 WSGNYVGLHISRLYETHPLADTI-------------------NRKTYNSLLPNGLGIELG 94
W+G Y G ++ ++ +L G ++G
Sbjct: 42 WTGFYAGFNVGYGFDASDNRGPTVIGVGPATGLVPPGATAVIAFTGNRNLEGFVGGGQVG 101
Query: 95 HNIQLED---FVFGINCHTTAAKDDSTFY----------------------RLKEKYFIY 129
+N Q V GI A +
Sbjct: 102 YNYQFTPGSGVVVGIEADAQFADFGRDRNRFIVATNPAALGGVAAQQVFNPNGLAGLDWF 161
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G V + GY+ D +L YG GGF D + G G+
Sbjct: 162 GTVRGRLGYAFDRVLFYGTGGFAYGGGGGRDFGLPNR----------DDFQTGWTAGGGI 211
Query: 190 DYMV----------NYDISLSASYRYIPH-------HIHSVNNSNAKSDVER-------- 224
+Y + + ++L Y+ +VNN+ V
Sbjct: 212 EYALPTDSFLNFFRSNAVTLKVEGLYVNLDRGRGLNGAFAVNNAGTLITVASPGVVVVNN 271
Query: 225 --VDRKGNAHIASLGINMHF 242
+ R + G+N F
Sbjct: 272 GLLRRDTEFAVVRAGLNYKF 291
>gi|103486581|ref|YP_616142.1| membrane protein [Sphingopyxis alaskensis RB2256]
gi|98976658|gb|ABF52809.1| membrane protein [Sphingopyxis alaskensis RB2256]
Length = 277
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 58/202 (28%), Gaps = 28/202 (13%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH---------TTAAKDD 116
+ T N N LG++ ++ +FV G +
Sbjct: 79 GFCNGAATSTANVGCRNDKDGPEFFGRLGYDKRMGNFVLGAVVEGGHSVARDSVSGFSTT 138
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
Y + + + L+AGY+ L Y GG A + + +++ +
Sbjct: 139 PASYTMSREADYQANARLRAGYTPGGGALFYVTGGGAYARLDNRFTTTNTANSFADNG-- 196
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS---------------VNNSNAKS 220
+ +G G + MV +I + Y Y + +
Sbjct: 197 -KTNAWGYTVGGGAELMVTNNIGIGLEYLYTDVKDKDYVVNVGPGSAPATNPFLLNGGGT 255
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D+ R D H ++ F
Sbjct: 256 DIRRSDPHFRTHSVRGTLSYRF 277
>gi|170749700|ref|YP_001755960.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170656222|gb|ACB25277.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 287
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 66/253 (26%), Gaps = 72/253 (28%)
Query: 54 WSGNYVGLHISRLYETHPLADT------------------INRKTYNSLLPNGLGIELGH 95
W+G YVG++ ++ + T ++ ++ G ++G+
Sbjct: 40 WTGFYVGVNAGYGFDANSRNTTNYALRGGTLANSPDTNAVVSVNNRSNNNGFSGGAQIGY 99
Query: 96 NIQLED---FVFGINCHTTAAKDDSTFYRL-----------------------KEKYFIY 129
N QL V G +
Sbjct: 100 NWQLTPGSGIVVGFEADAQYVDFARRANGTLNYGLTGTPGFAFSAPRAYVATSGNGLDYF 159
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G + GY+ D L+YG GG+ D D + + + +G G+
Sbjct: 160 GTARGRLGYAFDRTLVYGTGGYAYGSGQD--------DQTFAGRNFRSSFRNGYAVGGGV 211
Query: 190 DYMV----------NYDISLSASYRYIPHHIHSVNNSN----------AKSDVERVDRKG 229
+Y + + ++L Y+ S + +
Sbjct: 212 EYALPTDSFLNFFRSSAVTLKVEGLYVNLDRQKNTASGVFIPNLLPPRGVAYLNGAAAGT 271
Query: 230 NAHIASLGINMHF 242
+ G+N F
Sbjct: 272 EFAVVRAGLNYKF 284
>gi|163852300|ref|YP_001640343.1| porin [Methylobacterium extorquens PA1]
gi|218531058|ref|YP_002421874.1| porin [Methylobacterium chloromethanicum CM4]
gi|240139636|ref|YP_002964112.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|254562046|ref|YP_003069141.1| 31 kDa outer-membrane immunogenic protein [Methylobacterium
extorquens DM4]
gi|163663905|gb|ABY31272.1| porin [Methylobacterium extorquens PA1]
gi|218523361|gb|ACK83946.1| porin [Methylobacterium chloromethanicum CM4]
gi|240009609|gb|ACS40835.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|254269324|emb|CAX25290.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens DM4]
Length = 290
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 63/275 (22%), Gaps = 74/275 (26%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI---------------- 76
DL A +Q W+G Y G + + T
Sbjct: 22 AADLPRRAAPPPVFQPVPVFTWTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGTT 81
Query: 77 ---NRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFY---------- 120
S G ++G+N Q V G+ A
Sbjct: 82 AVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAA 141
Query: 121 ------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+G V + GY+ D L+YG GGF
Sbjct: 142 QQVFNPGGLSGLDFFGTVRGRLGYAFDRTLVYGTGGFAYGSGGGREFGT---------GV 192
Query: 175 RFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + G G++Y + + ++L Y+ + +D +
Sbjct: 193 SSNDFQTGWAAGGGIEYALPTDSFLNFFKSSAVTLKVEGLYVNLDRGTGGRGAFATDNQG 252
Query: 225 VDR-----------------KGNAHIASLGINMHF 242
+ G+N F
Sbjct: 253 RTVSIGSPGTVLVSGGQQVRDTEFAVVRAGLNYKF 287
>gi|326387223|ref|ZP_08208833.1| hypothetical protein Y88_1273 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208404|gb|EGD59211.1| hypothetical protein Y88_1273 [Novosphingobium nitrogenifigens DSM
19370]
Length = 241
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 51/171 (29%), Gaps = 16/171 (9%)
Query: 81 YNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD-------STFYRLKEKYFIYGDV 132
+NS G +G++ L V G T + D STF + + +
Sbjct: 78 FNSANGVAYGGGIGYDYTLNPTMVLGAEFDVTGSTADWKNPNVSSTFNMTRMRVGRDIFL 137
Query: 133 VLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ G+ ++ L Y GF + + +D + S + G G+ +
Sbjct: 138 GGRFGFLLNPKNLFYVKAGFANTQFSIT-------GENTGETLHYDSNSSGLRFGFGVQH 190
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ Y Y + N D K + H I F
Sbjct: 191 RLTKKTYAKIEYDYSHYGSGQFNYKGTTPDASYFALKNDRHQLMASIGFKF 241
>gi|119385191|ref|YP_916247.1| hypothetical protein Pden_2464 [Paracoccus denitrificans PD1222]
gi|119374958|gb|ABL70551.1| hypothetical protein Pden_2464 [Paracoccus denitrificans PD1222]
Length = 239
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 66/222 (29%), Gaps = 28/222 (12%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP---LADTINRKTYN----SLLPNGLG 90
+ G W G Y+G + + + ++ Y +
Sbjct: 29 ETPVVMPQEVAPAIGSWEGLYLGGALGSAFGSDDRVGISQPGGGAAYTPGSVDIRGATFS 88
Query: 91 IELGHNIQLE----DFVFGINCHTTAAKDDSTFYRL----KEKYFIYGDVVLKAGYS--V 140
+++G+ Q E V G A D +F R + + K G
Sbjct: 89 LQMGYRWQREVRGRQIVTGPELAYEAGGADDSFSRAGESASSELNGLLSLRWKTGVLNEA 148
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ LL YG G + + D S++ +G+G++ +N SL
Sbjct: 149 EDLLFYGSVGIAHGSFDYTVTG-------AGMRYDGDFTDSALTVGLGVEKRLNERASLF 201
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + ++ ++ H +G+N F
Sbjct: 202 GEWEFRQFGKTTLTDAAG----YTTRATPEHHSIRVGVNFAF 239
>gi|45758057|gb|AAO85787.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 64/214 (29%), Gaps = 39/214 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G L +G G L + I +G+ +
Sbjct: 26 FYAGAKAGWASFHDGLTQF-------DHEGDGGGFNLKYGINRNSVTYGVFGGYQILNQN 78
Query: 117 STFYRLKEKYFIYGDVVLKAGYS-------------------------VDSLLIYGMGGF 151
+ + Y +G V ++ V +L +YG G
Sbjct: 79 NFGLATELGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGV 138
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---H 208
V+ K+++ + S++LG GL+Y + +++ Y+Y+ +
Sbjct: 139 ALVRNDY----YVQQHVDKDSRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGN 194
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V + + + H S G++ F
Sbjct: 195 VDKAVRKTVSIPTGTNFQYSPDIHSVSAGLSYRF 228
>gi|195970138|ref|NP_386839.2| putative HEAT resistant agglutinin 1 protein [Sinorhizobium
meliloti 1021]
gi|187904211|emb|CAC47312.2| Putative heat resistant agglutinin 1 protein [Sinorhizobium
meliloti 1021]
Length = 275
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/265 (12%), Positives = 67/265 (25%), Gaps = 38/265 (14%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+F V +++ A D+Y P F E V SG Y+ +
Sbjct: 2 KKIFRGVAAALLSGTPVYAADVYQPPVEAPFVEQPVEVVEA-------SGWYLRGDVGYA 54
Query: 67 YETHPLADTINRKTYNSLLP------NGLGIELGHNIQLEDFV-------FGINCHTTAA 113
+ A N + + + G Q+ ++ + +
Sbjct: 55 WNDLRGAHYFQGSNSNLVDFDRADVDDSYVLGGGVGYQINSYLRADVTLDYLGESDFNGS 114
Query: 114 KDDSTFYRLKEKYFIYGDVVL---------KAGYSVDSLLIYGMGGFGGAYVIDSSL--- 161
+ + G + + Y G GG V +L
Sbjct: 115 TSGGCGVAVNCVSNDVASMSAWSLLANAYVDLG-TYGAFTPYVGAGIGGTRVKWGTLRNT 173
Query: 162 ----EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + + L G + ++ YR+ + ++ N
Sbjct: 174 SCDVTDPSNCDPTIEHKGESDWRFTYALMAGTSVDLTCNLKADVGYRFRHINGGNMFGYN 233
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
S D+ H A G+ F
Sbjct: 234 LNSG-PAYDKDIYVHEARAGLRYSF 257
>gi|45758055|gb|AAO85786.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 64/214 (29%), Gaps = 39/214 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G L +G G L + I +G+ +
Sbjct: 26 FYAGAKAGWASFHDGLTQF-------DHEGDGGGFNLKYGINRNSVTYGVFGGYQILNQN 78
Query: 117 STFYRLKEKYFIYGDVVLKAGYS-------------------------VDSLLIYGMGGF 151
+ + Y +G V ++ V +L +YG G
Sbjct: 79 NFGLATELGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGV 138
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---H 208
V+ K+++ + S++LG GL+Y + +++ Y+Y+ +
Sbjct: 139 ALVRNDY----YVQQHVDKDSRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGN 194
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V + + + H S G++ F
Sbjct: 195 VDKAVRKTVSIPTGTNFQYSPDIHSVSAGLSYRF 228
>gi|325915202|ref|ZP_08177525.1| opacity protein [Xanthomonas vesicatoria ATCC 35937]
gi|325538562|gb|EGD10235.1| opacity protein [Xanthomonas vesicatoria ATCC 35937]
Length = 279
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 57/211 (27%), Gaps = 36/211 (17%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT--------- 110
G P + G LG++ Q ++V+G+
Sbjct: 77 GFCGGAAAGRTPAS-----GCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDIRDSV 131
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+A Y + + + GY+ + L Y G S ++
Sbjct: 132 SAFSTTPALYTFTRQLNRTAALRGRIGYAFGQQGNYLAYFTAGVARGEFDHSFASSNTAN 191
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS--------------- 212
+ + G G+GL ++ +S+ Y +
Sbjct: 192 SFTGSGGD---SADGYQAGVGLQRRLSDHVSVGVEYLFTRLQDEDTRVRVGLGTAPATNP 248
Query: 213 -VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + A +D+ R D + + L F
Sbjct: 249 FLRVNPAGTDLRRTDTDFSTNAVRLTATYRF 279
>gi|163853839|ref|YP_001641882.1| porin [Methylobacterium extorquens PA1]
gi|218532784|ref|YP_002423600.1| porin [Methylobacterium chloromethanicum CM4]
gi|240141293|ref|YP_002965773.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|254563802|ref|YP_003070897.1| 31 kDa outer-membrane immunogenic protein [Methylobacterium
extorquens DM4]
gi|163665444|gb|ABY32811.1| porin [Methylobacterium extorquens PA1]
gi|218525087|gb|ACK85672.1| porin [Methylobacterium chloromethanicum CM4]
gi|240011270|gb|ACS42496.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|254271080|emb|CAX27087.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens DM4]
Length = 296
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 62/280 (22%), Gaps = 80/280 (28%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI------------------ 76
DL A + W+G Y G + +
Sbjct: 22 DLPRRAAPPPVFTPIPVFTWTGFYAGFNAGYGFGVDDNGAAPVVGVNSLTGLVRPGQTAV 81
Query: 77 -NRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFY------------ 120
+ G ++G+N Q V GI
Sbjct: 82 IAFGGNSRSDGFVGGGQIGYNYQFTPGSGVVIGIEADAQYVDFGRDRNQFAVANSNPAFP 141
Query: 121 ----------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+G V + GY+ D +L YG GGF
Sbjct: 142 GVAAQQVFNPNGLSSLDFFGTVRGRLGYAFDRVLFYGTGGFAYGAGGGRQFGLPN----- 196
Query: 171 NAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHH------IHSVN 214
D + G G++Y + + ++L Y+ +
Sbjct: 197 ---SSSDDFRTGYAAGGGVEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRGGGALNGAFA 253
Query: 215 NSNAKSDVERVD------------RKGNAHIASLGINMHF 242
+NA + + + G+N F
Sbjct: 254 VNNAGAVIGTTSPGVIVVSGPSRRNDTEFAVVRAGLNYKF 293
>gi|300922124|ref|ZP_07138263.1| OmpA-like transmembrane domain protein [Escherichia coli MS 182-1]
gi|300421526|gb|EFK04837.1| OmpA-like transmembrane domain protein [Escherichia coli MS 182-1]
Length = 249
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 69/227 (30%), Gaps = 30/227 (13%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELG 94
Q G +G YV AD + + +G GI G
Sbjct: 24 SAQALADGSKTGFYVTGKAGTSVVSLSDQRFIDGEGEWADRYKGGDDHDTVFSG-GIAAG 82
Query: 95 HNI--QLE-------DFVFGINCHTTAAKDDSTFYRLKEKYFI-YGDVVLKAGYSVDS-- 142
++ Q +F T + K + ++L A Y +
Sbjct: 83 YDFYPQFSIPVRTELEFYARGKADTKYNLYKDDWSHDDLKSEVSVNTLMLNAYYDFRNDS 142
Query: 143 -LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD------GHGSSVVLGIGLDYMVNY 195
+ G G A + + D GR + LG G+ Y V
Sbjct: 143 AFTPWVSAGIGYARIHQKTTGISTWDYGYGYSGRESLSHSDSADNFAWSLGAGVRYDVTP 202
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
DI+L SYRYI SV+ + D + + +H LG+ +F
Sbjct: 203 DIALDLSYRYIDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 249
>gi|85704834|ref|ZP_01035935.1| possible outer membrane protein [Roseovarius sp. 217]
gi|85670652|gb|EAQ25512.1| possible outer membrane protein [Roseovarius sp. 217]
Length = 209
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 29/182 (15%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
W+G Y+G + + D+ + G+ G++ +V G
Sbjct: 57 SSANWTGFYIGGQLGVG-----VVDSDISSNDEDFIG---GVTFGYDHDFGRWVLGGALD 108
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
A + V L+ G + + L+YG G+
Sbjct: 109 YDFADIN---AGPGTSIEEIFRVKLRGGPKIGNGLLYGAAGWA----------------- 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
NA G +G G +Y+V+ S+ Y + + ++ +V
Sbjct: 149 -NADTDTAGRDDGWFIGAGYEYLVSSQFSVGGEVLYHEFDNFNSTGIDVEATTIQVRATF 207
Query: 230 NA 231
Sbjct: 208 RF 209
>gi|332188913|ref|ZP_08390616.1| hypothetical protein SUS17_4025 [Sphingomonas sp. S17]
gi|332011053|gb|EGI53155.1| hypothetical protein SUS17_4025 [Sphingomonas sp. S17]
Length = 285
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 29/187 (15%)
Query: 82 NSLLPNGLGIELGHNIQLEDFVFGINCHT---------TAAKDDSTFYRLKEKYFIYGDV 132
N +G + Q + V+G+ +A +Y +
Sbjct: 102 NDKDGIAYYGRVGLDHQAGNIVYGVVGEFGKSEITDSVSAFSTTPAWYTMTRSIDWEASA 161
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
+ GY+ + L YG G G A + ++ + D + + G G++
Sbjct: 162 RGRLGYAANKTLFYGTFGAGYARINREFATSNGANAFAISG---DRNQFGFLGGGGIEQK 218
Query: 193 VNYDISLSASYRYIPHHIHSVNN-----------------SNAKSDVERVDRKGNAHIAS 235
+ + S+ Y Y + + +D+ R D K H
Sbjct: 219 IGRNFSIGMEYMYHQYRDDDTRVRVTQGTAPATNPFVLAPNTTGTDIRRSDDKFRWHSLR 278
Query: 236 LGINMHF 242
F
Sbjct: 279 ATAAFRF 285
>gi|254473179|ref|ZP_05086577.1| outer surface protein [Pseudovibrio sp. JE062]
gi|211957900|gb|EEA93102.1| outer surface protein [Pseudovibrio sp. JE062]
Length = 264
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/251 (14%), Positives = 80/251 (31%), Gaps = 26/251 (10%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L + ++V + + A DL P ++ + G Y+ I
Sbjct: 7 LLSLTAAALVTSSVAYAADLPAPVFVEEPELPQIQIG---------GGWYLRGDIGYKVY 57
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTA-AKDDSTFYRLKEKY 126
P + + + N L + +G + D++ + + ++ L +
Sbjct: 58 KDPKVNFADIEFSNEKLDPTGVVGVGVGYRFNDYIRTDVTLDYEWDSDFEANVPCLSDCV 117
Query: 127 FIYGDVVLKA----------GYS----VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ D + +A GY+ + Y G G +YV ++ +
Sbjct: 118 GVTTDSLERAKIDVWTILWNGYADLGYFNGFTPYVGAGIGASYVRVKNVNYFNPNGRAGK 177
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG-NA 231
+ S L G Y ++ + + A YRY+ + ++ + + A
Sbjct: 178 YPHGNKWNLSWALMAGTAYDIDENWRIDAGYRYLHIGEVQTKSFDSNGHITGIKYDNLAA 237
Query: 232 HIASLGINMHF 242
H +G+ F
Sbjct: 238 HEVRVGLRYEF 248
>gi|77748528|ref|NP_640827.2| membrane protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 279
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/211 (13%), Positives = 54/211 (25%), Gaps = 36/211 (17%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT--------- 110
G P + G LG++ Q ++V+G+
Sbjct: 77 GFCGGAAAGRTPAS-----GCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDVRDSV 131
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+A FY + + + GY+ L Y G S ++
Sbjct: 132 SAFSTTPAFYTFTRQLNRTAALRGRIGYAFGTQGDYLAYITAGVARGEFDHSFASSNTAN 191
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS------- 220
+ ++ G GIGL ++ +S+ Y +
Sbjct: 192 SFTSSGGD---SADGYQAGIGLQRRLSDKVSVGVEYLFTRLQDDDTRVRVGPGTAPATNP 248
Query: 221 ---------DVERVDRKGNAHIASLGINMHF 242
D+ R D + + L F
Sbjct: 249 FLRVNPAGTDLRRTDTDVSTNAVRLTATYRF 279
>gi|220924333|ref|YP_002499635.1| PE-PGRS family protein [Methylobacterium nodulans ORS 2060]
gi|219948940|gb|ACL59332.1| PE-PGRS family protein [Methylobacterium nodulans ORS 2060]
Length = 494
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/235 (14%), Positives = 61/235 (25%), Gaps = 54/235 (22%)
Query: 54 WSGNYVGLHISR---------LYETHPLADTINRKTYNSLLPNG---------------- 88
W+G YVG H+ + G
Sbjct: 266 WAGAYVGGHLGALHTLSGRTFGSTALAGGEPGGAGQRGIDGGGGGGGAVAFAGLARSPAI 325
Query: 89 -LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G LG+N Q V+G + + D + G + + G+S + L+Y
Sbjct: 326 LGGAHLGYNWQNAALVYGAEGDVSVSAAD--------SHRYLGTIRGRLGWSGGATLVYA 377
Query: 148 MGGFGGAYVI-------------------DSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G A ++ + R + V+G G
Sbjct: 378 TAGVAFAGNESVRAVFAGNGGAGGNGGAVLAAPGGAGGAGGQALAFRANDTEIGFVVGGG 437
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSN-AKSDVERVDRKGNAHIASLGINMHF 242
L+ ++ +S A Y + + R +A + ++ F
Sbjct: 438 LEARLSERVSAGAEALYYGLSSRAFAPALPGPGRTLVAGRGNDALVLRTRLSFSF 492
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 40/152 (26%), Gaps = 29/152 (19%)
Query: 32 RKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL-- 89
+ + WSG YVG H+ + ++ +
Sbjct: 19 QASRAADLPAQAAPIPAFVVQDWSGFYVGSHLGGVVSGRGERRVVSGDGGGLIPAGFGGR 78
Query: 90 ------------------GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
G+ G+N Q V GI + + G
Sbjct: 79 GGRTGIAIGRIEGRTVFQGVHAGYNWQQGSAVAGIEADLASLGPVD---------DLLGS 129
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
V + G+ D LLIYG GG V L
Sbjct: 130 VRGRLGFGSDRLLIYGTGGLAIRSVPGLVLGT 161
>gi|261496238|ref|ZP_05992643.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308069|gb|EEY09367.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
Length = 372
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 65/214 (30%), Gaps = 39/214 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G L +G G L + I +G+ +
Sbjct: 26 FYAGAKAGWASFHDGLTQF-------DHEGDGGGFNLKYGINRNSVTYGVFGGYQILNQN 78
Query: 117 STFYRLKEKYFIYGDVVLKAGYS-------------------------VDSLLIYGMGGF 151
+ + Y +G V ++ V +L +YG G
Sbjct: 79 NFGLATELGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGV 138
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---H 208
++V+ D ++ + S++LG GL+Y + +++ Y+Y+ +
Sbjct: 139 ALVRNDYYVQQRVDKD----SRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGN 194
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V + + + H S G++ F
Sbjct: 195 VDKAVRKTVSIPTGTNFQYSPDIHSVSAGLSYRF 228
>gi|294677984|ref|YP_003578599.1| hypothetical protein RCAP_rcc02462 [Rhodobacter capsulatus SB 1003]
gi|294476804|gb|ADE86192.1| membrane protein, putative [Rhodobacter capsulatus SB 1003]
Length = 209
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 59/210 (28%), Gaps = 25/210 (11%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIE 92
+ +E W G Y G+ + + G+
Sbjct: 25 PPVVESEPTVAATPAPAPVQAWDGFYAGITGGSVTGGGASYAPGGAAF--GMGRGSYGVF 82
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G+N+Q V+G A + K+ D+ +AG + L Y G+
Sbjct: 83 GGYNLQSGALVYGGEIAAQATDFN--LDGAPGKFDNMIDLKARAGMAYGKALPYAFVGYS 140
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ KN G+ +G + G+G+DY VN S+ A
Sbjct: 141 -------------RGDWKNGDGQTNGAADGMNYGLGVDYAVNDKWSVGAE--------LM 179
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D N + + F
Sbjct: 180 RRELSTDFDGSARSVDTNFNTVQVRAGFRF 209
>gi|240142350|ref|YP_002966860.1| putative porin [Methylobacterium extorquens AM1]
gi|240012294|gb|ACS43519.1| putative porin [Methylobacterium extorquens AM1]
Length = 293
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 60/256 (23%), Gaps = 75/256 (29%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSL-------------------LPNGLGIELG 94
W+G + G + + T I + G ++G
Sbjct: 43 WTGFFAGFNAGYGFGTSDDRGPITAAVPGTYGVFSNPGPQVIAFAGQRSADGFVGGGQIG 102
Query: 95 HNIQLED---FVFGINCHTTAAKDDSTFYRLKEK-----------------YFIYGDVVL 134
+N Q V G+ S R +G V
Sbjct: 103 YNYQFTPGSGVVVGVEADAQYVDFGSDRNRFVATSPLAPGAVAFNPNTLTGLDYFGTVRG 162
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV- 193
+ GY+ D L+Y GGF D + +G G++Y +
Sbjct: 163 RLGYAFDRTLVYATGGFAYGSGGGRDFGLPN--------FTRDEFQTGWTVGGGVEYALP 214
Query: 194 ---------NYDISLSASYRYIPHHIHSVNNSNAKSDVERV------------------D 226
+ ++L Y+ + NN +
Sbjct: 215 TDSFLNFFRSSAVTLRVEGLYVNLDQGNRNNGLFAVGATGIPVGLGSAGVVQVSGSGNNR 274
Query: 227 RKGNAHIASLGINMHF 242
+ G+N F
Sbjct: 275 VDTEFAVIRSGVNYKF 290
>gi|83953797|ref|ZP_00962518.1| outer membrane protein, putative [Sulfitobacter sp. NAS-14.1]
gi|83841742|gb|EAP80911.1| outer membrane protein, putative [Sulfitobacter sp. NAS-14.1]
Length = 198
Score = 72.1 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 63/230 (27%), Gaps = 40/230 (17%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYG-IWSGNYVGLHISRLYETHPLAD 74
+ V+ + + A Y + E + G W+G Y GL +
Sbjct: 6 AAVLASTAFAGATYAGSLAEPVVEPVMTAPVPAPDLGGDWTGFYTGLQLGYSDAEVDNGL 65
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD--STFYRLKEKYFIYGDV 132
+ +Y G G+N FV G D +
Sbjct: 66 EGDNGSY--------GFHAGYNYDFGRFVLGGELDYDKTDIDLNDAAGVTQGSIDSVARA 117
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
+K GY + S LIY GG+ A G G+G+DY
Sbjct: 118 KIKGGYDLGSTLIYATGGYARADT-------------------TMGDEDGAFYGVGMDYK 158
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S+ A + S + N + ++ + F
Sbjct: 159 ITEQYSVGAELLEHKFNDVSGVSGN----------DADVTTFNIRGSYRF 198
>gi|114763049|ref|ZP_01442479.1| possible outer membrane protein [Pelagibaca bermudensis HTCC2601]
gi|114544373|gb|EAU47381.1| possible outer membrane protein [Roseovarius sp. HTCC2601]
Length = 199
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 68/192 (35%), Gaps = 34/192 (17%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
G W+G VG+ + Y + + G+ ++ +++ G
Sbjct: 42 TGDWTGPSVGVQLGYGYAD------PDGPEDETSDGAVYGLNAYYDHDFGNWIAGAGVEY 95
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
A D V + GY + + ++YG GG+ A SL+ +S+
Sbjct: 96 EGADIDLGEAG---DLESMARVGGRVGYDLGTTMVYGQGGYARAMTDGGSLDAGDSN--- 149
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+G+G + V +++LS +Y N SD + D +
Sbjct: 150 -----------GYYVGVGAETYVADNVTLSGDVKY-----------NEFSDFDDDDLEIG 187
Query: 231 AHIASLGINMHF 242
A A++G+N F
Sbjct: 188 ATTATVGLNYRF 199
>gi|92116695|ref|YP_576424.1| hypothetical protein Nham_1117 [Nitrobacter hamburgensis X14]
gi|91799589|gb|ABE61964.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 274
Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 56/249 (22%), Gaps = 73/249 (29%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINR----------------------KTYNSLLPNGL 89
+W G YVG S+ +G
Sbjct: 41 TVWQGYYVGGQAGVGESDMNFTGATRNVAARLLSGTAIENSGQVSSWPLGGKASVRGDGW 100
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTF---------------------YRLKEKYFI 128
G +G+N Q +D V G+ + K +
Sbjct: 101 GGFVGYNSQWDDVVIGVEANYMHGKFGGSRSDSMSRFFTDSLGYTDGVTYQSTATMSISD 160
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD---------------NSKNAK 173
G + +AGY V + L Y GG + N
Sbjct: 161 MGTLRARAGYVVGAFLPYMFGGVALGQADIVRSAHIFGTQVNPAAAPGFTNVPFNVSGTD 220
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G++ G+GLD + + + YI N +
Sbjct: 221 GKYSHLIYGYSAGVGLDVNLIGGLFARVEWEYIRF---------------TSSIDTNVNT 265
Query: 234 ASLGINMHF 242
G+ F
Sbjct: 266 VRAGVGYKF 274
>gi|209886118|ref|YP_002289974.1| hypothetical protein OCAR_7002 [Oligotropha carboxidovorans OM5]
gi|209874314|gb|ACI94110.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 493
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/234 (11%), Positives = 59/234 (25%), Gaps = 27/234 (11%)
Query: 32 RKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP-------LADTINRKTYNSL 84
R + Y W+G Y+ + T N
Sbjct: 254 RPGAQAGTPFYTKAARSPAY-NWTGFYLAGGGGYGMFSADQRSVDTTTGAITGIDTRNGG 312
Query: 85 LPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST------FYRLKEKYFIYGDVVLKAG 137
I G++ Q+ +V G+ + + K ++ G
Sbjct: 313 RGYFGTIAGGYDWQINPTWVVGVFGDAQFGDIRGSLSDAGLGVTGRLKNDTNYAAGVRVG 372
Query: 138 YSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN-- 194
Y + + L Y GG+ A + + H +G G++ +N
Sbjct: 373 YLIAPNALSYVNGGYSHADFKG---VTLTDETGLAVGSTGKSHRDGWFIGGGVENDLNFF 429
Query: 195 ----YDISLSASYRYIPHHIHS--VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ YR + + + ++ + + K + F
Sbjct: 430 GINAPGWFMKTEYRVAEYSRKTSALYDAAGTLTTDGIAFKPYVQTVQTSLVYRF 483
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 72/255 (28%), Gaps = 39/255 (15%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+ I + + + A DL + W+G YV
Sbjct: 15 KKILLGSVALIALGSAANAADL---------SARYTKAPVVAP-VSNWTGFYVSGGFGYG 64
Query: 67 YETHPL-ADTINRKTYNSLLPNGLG----IELGHNIQL-EDFVFGINCHTTAAKDDST-- 118
A T + G G + +G++ Q+ +V G+ +
Sbjct: 65 IMEADQHATTSGVASVVDTRMGGRGYFGTVGVGYDYQITPSWVVGVFGDAQWGDIRGSLM 124
Query: 119 ----FYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ K + GY V ++L Y G+ A ++ + S K
Sbjct: 125 DLNNGITARLKNDAAYAAGARLGYLVAPNVLSYVNVGYSYASFKGTTFDDGVSTIGK--- 181
Query: 174 GRFDGHGSSVVLGIGLDYMVN------YDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
H +G G++ +N + YR ++ + + D++ +
Sbjct: 182 ----SHRDGWFIGGGVENDLNFFGINAPGWFMKTEYRVAEYNRRNSVYAG---DIDGIAF 234
Query: 228 KGNAHIASLGINMHF 242
K S + F
Sbjct: 235 KPYVQTVSTSLVYRF 249
>gi|300815558|ref|ZP_07095782.1| porin protein, opacity family [Escherichia coli MS 107-1]
gi|300531487|gb|EFK52549.1| porin protein, opacity family [Escherichia coli MS 107-1]
Length = 249
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 69/227 (30%), Gaps = 30/227 (13%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELG 94
Q G +G YV AD + + +G GI G
Sbjct: 24 SAQALADGNKTGFYVTGKAGTSVVSLSDQRFIDGEGVWADRYKGGDDHDTVFSG-GIAAG 82
Query: 95 HNI--QLE-------DFVFGINCHTTAAKDDSTFYRLKEKYFI-YGDVVLKAGYSVDS-- 142
++ Q +F T + K + ++L A Y +
Sbjct: 83 YDFYPQFSIPVRTELEFYARGKADTKYNLYKDDWSHDDLKSEVSVNTLMLNAYYDFRNDS 142
Query: 143 -LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD------GHGSSVVLGIGLDYMVNY 195
+ G G A + + D GR + LG G+ Y V
Sbjct: 143 AFTPWVSAGIGYARIHQKTTGISTWDYGYGYSGRESLSHSDSADNFAWSLGAGVRYDVTP 202
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
DI+L SYRYI SV+ + D + + +H LG+ +F
Sbjct: 203 DIALDLSYRYIDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 249
>gi|77747747|ref|NP_635849.2| membrane protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|77761086|ref|YP_241570.2| membrane protein [Xanthomonas campestris pv. campestris str. 8004]
gi|188989886|ref|YP_001901896.1| putative outer membrane protein [Xanthomonas campestris pv.
campestris str. B100]
gi|167731646|emb|CAP49824.1| putative outer membrane protein [Xanthomonas campestris pv.
campestris]
Length = 279
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 54/203 (26%), Gaps = 31/203 (15%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT---------TAAKDDST 118
T G+ G++ Q+ D+V+G+ +A
Sbjct: 80 GGAAAGRTPASGCSKDKGGAEYGVRAGYDWQVGDWVYGVVAEYTRNDLRDSVSAFSTTPA 139
Query: 119 FYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
Y + + + GY+ L Y G S +++ + G
Sbjct: 140 LYTFTRQLNRTAALRGRVGYAFGAQGDYLAYVTAGVARGEFDHSFASSNTANSFTGSGGD 199
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS--------------- 220
+ GIGL ++ +S+ Y +
Sbjct: 200 ---SANGYQAGIGLQRRLSDHVSVGVEYLFTRLQDEDTRVRVGPGTAPATNPFLRVNPAG 256
Query: 221 -DVERVDRKGNAHIASLGINMHF 242
D+ R D +++ L + F
Sbjct: 257 TDLRRTDTDFSSNAIRLTASYRF 279
>gi|310816635|ref|YP_003964599.1| heme receptor [Ketogulonicigenium vulgare Y25]
gi|308755370|gb|ADO43299.1| heme receptor [Ketogulonicigenium vulgare Y25]
Length = 1183
Score = 71.8 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 65/210 (30%), Gaps = 38/210 (18%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYN----------SLLPNGLGIELGHNIQLED 101
W+G + GL + + T + N +G ++G+N Q +
Sbjct: 900 RDWAGWHAGLFTGFNSTENDTSFTALDGSTNSITANEGFVADFNGALVGGQVGYNWQFAN 959
Query: 102 -FVFGINCHTTA----------------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL 144
+ G+ + A + ++ + L+AGY+ +
Sbjct: 960 GLILGVQGEFSRPDQRADIEILSNEGTLAGTANLAAGYHQQIDWNAALNLRAGYAFSNDF 1019
Query: 145 -IYGMGGFGGA---YVIDSSLEKVESDNSKNAKGRF-------DGHGSSVVLGIGLDYMV 193
+YG+ G + DS S N G D + + +G G +Y +
Sbjct: 1020 NMYGLAGVARQEETWFRDSYTADYASRYMPNGNGTTFAGLEEIDVSRNGINIGFGAEYAL 1079
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
N + S+ + V + A+
Sbjct: 1080 NDNWSIWGQFNRTFFRKTEVQFTEAREGTS 1109
>gi|259415944|ref|ZP_05739864.1| putative outer membrane protein [Silicibacter sp. TrichCH4B]
gi|259347383|gb|EEW59160.1| putative outer membrane protein [Silicibacter sp. TrichCH4B]
Length = 198
Score = 71.8 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 50/192 (26%), Gaps = 36/192 (18%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
W+G Y GL + L + + + G+ G+N +V G
Sbjct: 43 DTDWTGFYGGLQYGQGEADLSLGGASASEDF-----DAFGVHGGYNHDFGRYVLGGELMY 97
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
D+ + +AG + + Y G +
Sbjct: 98 NDISGDNGGDG------DLTSLRARAGMDLGRFMPYVTAGVSHLSL-------------- 137
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
A G D + G+G +Y+V+ S+ Y V D +
Sbjct: 138 -ASGGADISENGFTYGVGAEYLVSERFSVGLEYTKSDFSDA--------GGVAGADLDTD 188
Query: 231 AHIASLGINMHF 242
+ F
Sbjct: 189 KVQLRA--SYRF 198
>gi|27379463|ref|NP_770992.1| hypothetical protein blr4352 [Bradyrhizobium japonicum USDA 110]
gi|27352615|dbj|BAC49617.1| blr4352 [Bradyrhizobium japonicum USDA 110]
Length = 154
Score = 71.8 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 12/148 (8%)
Query: 104 FGINCHTTAAKDDSTFYR---------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
FG+ + + +F + + VV +AG++V + L Y GG+ G
Sbjct: 2 FGMEGTISGLDNKGSFLNTAFGAGDDVFSWRANVLATVVGRAGFAVQNNLFYIKGGYAGV 61
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
S + V G + +G G +Y V + + Y Y +
Sbjct: 62 NNRLSVSDTV---GPATGSGGQTHWANGWTVGAGWEYGVTRNWIVGLEYNYAAFGSQTYQ 118
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + + A + + F
Sbjct: 119 LGGTTTNYTFDAKPRDLQWAVVRASYKF 146
>gi|329851836|ref|ZP_08266517.1| membrane protein [Asticcacaulis biprosthecum C19]
gi|328839685|gb|EGF89258.1| membrane protein [Asticcacaulis biprosthecum C19]
Length = 278
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/251 (14%), Positives = 74/251 (29%), Gaps = 43/251 (17%)
Query: 29 YLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN- 87
Y+ + N AD+N + D G Y G ++ + + N P
Sbjct: 32 YVGVAAGMSNIADDNETVEFDTNLD--GAY-GDTVNTFAGANAFSPGFCTGAANGRTPGE 88
Query: 88 ---------GLGIELGHNIQLEDFVFGI---------NCHTTAAKDDSTFYRLKEKYFIY 129
G+G+ G++ Q+ ++VFG+ TA Y
Sbjct: 89 GCAKQREEAGIGLRAGYDWQVGNWVFGVVGEVTNANFEDSVTAFSTTPANYVFTRDIENI 148
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ KAGY + +Y G+ A + + ++ G +G+G+
Sbjct: 149 NALRGKAGYVMGDWQVYLTAGYAQADIERTFRTSNALNSFTATDGDDSD---GYQVGLGI 205
Query: 190 DYMVNYDISLSASYRYIPHHIHS------------------VNNSNAKSDVERVDRKGNA 231
+ ++ Y + +++ +D+ R K
Sbjct: 206 EQRISGRWIGGIEYLRTSLKDEPAVVVRAGPSANTFNSNPFLIVNSSGTDMRRTSDKIEI 265
Query: 232 HIASLGINMHF 242
L + F
Sbjct: 266 DTLRLSLRYQF 276
>gi|45758059|gb|AAO85788.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 39/214 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G L +G G +L + I +G+ +
Sbjct: 26 FYAGAKAGWASFHDGLTQF-------DHEGDGGGFDLKYGINRNSVTYGVFGGYQILNQN 78
Query: 117 STFYRLKEKYFIYGDVVLKAGYS-------------------------VDSLLIYGMGGF 151
+ + Y +G V ++ V +L +YG G
Sbjct: 79 NFGLATELGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGV 138
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---H 208
++V+ D ++ + S++LG GL+Y + +++ Y+Y+ +
Sbjct: 139 ALVRNDYYVQQRVDKD----SRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGN 194
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V + + + H S G++ F
Sbjct: 195 VDKAVRKTVSIPTGTNFQYSPDIHSVSAGLSYRF 228
>gi|331678985|ref|ZP_08379657.1| adhesin/virulence factor Hek [Escherichia coli H591]
gi|331073050|gb|EGI44373.1| adhesin/virulence factor Hek [Escherichia coli H591]
Length = 245
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 69/227 (30%), Gaps = 30/227 (13%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELG 94
Q G +G YV AD + + +G GI G
Sbjct: 20 SAQALADGSKTGFYVTGKAGTSVVSLSDQRFIDGEGEWADRYKGGDDHDTVFSG-GIAAG 78
Query: 95 HNI--QLE-------DFVFGINCHTTAAKDDSTFYRLKEKYFI-YGDVVLKAGYSVDS-- 142
++ Q +F T + K + ++L A Y +
Sbjct: 79 YDFYPQFSIPVRTELEFYARGKADTKYNLYKDDWSHDDLKSEVSVNTLMLNAYYDFRNDS 138
Query: 143 -LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD------GHGSSVVLGIGLDYMVNY 195
+ G G A + + D GR + LG G+ Y V
Sbjct: 139 AFTPWVSAGIGYARIHQKTTGISTWDYGYGYSGRESLSHSDSADNFAWSLGAGVRYDVTP 198
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
DI+L SYRYI SV+ + D + + +H LG+ +F
Sbjct: 199 DIALDLSYRYIDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 245
>gi|4579742|dbj|BAA75215.1| OmpA-like outer membrane protein [Aggregatibacter
actinomycetemcomitans]
Length = 346
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 60/191 (31%), Gaps = 15/191 (7%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G H L + + G+ G+ I F +
Sbjct: 28 FYAGAKAGWASSHHGLNQFKQKGVSINRNSEAYGVFGGYQITDN---FAVEAGYEYFGRS 84
Query: 117 STFYRLKEKYFIYG---DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+++ + LKA Y V D+L +YG G + + D
Sbjct: 85 KAKVNGAQRFRHTAHGTTLALKASYPVLDNLDVYGRVGAALIRSDYKVGQANKPD----- 139
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI-PHHIHSVNNSNAKSDVERVDRKGNA 231
R+ S V G++Y + +++L A Y+++ A +D +
Sbjct: 140 --RYHNLKVSPVFAGGVEYAILPELALRAEYQWVSRVGNLGRAEEKADRSARTIDYSPDI 197
Query: 232 HIASLGINMHF 242
++G++ F
Sbjct: 198 GSVAVGLSYRF 208
>gi|293390286|ref|ZP_06634620.1| OmpA-like outer membrane protein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290950820|gb|EFE00939.1| OmpA-like outer membrane protein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 346
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 60/191 (31%), Gaps = 15/191 (7%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G H L + + G+ G+ I F +
Sbjct: 28 FYAGAKAGWASSHHGLNQFKQKGVSINRNSEAYGVFGGYQITDN---FAVEAGYEYFGRS 84
Query: 117 STFYRLKEKYFIYG---DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+++ + LKA Y V D+L +YG G + + D
Sbjct: 85 KAKVNGAQRFRHTAHGTTLALKASYPVLDNLDVYGRVGAALIRSDYKVGQANKPD----- 139
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI-PHHIHSVNNSNAKSDVERVDRKGNA 231
R+ S V G++Y + +++L A Y+++ A +D +
Sbjct: 140 --RYHNLKVSPVFAGGVEYAILPELALRAEYQWVSRVGNLGRAEEKADRSARTIDYSPDI 197
Query: 232 HIASLGINMHF 242
++G++ F
Sbjct: 198 GSVAVGLSYRF 208
>gi|100913602|gb|ABF69692.1| Pap31 hemin-binding protein [Bartonella henselae]
Length = 181
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 49/187 (26%), Gaps = 58/187 (31%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
++++ + + A D+ +P + W+G Y+G + +
Sbjct: 3 VIALISASAAQAADVIVPH--------EVAPTVISAPAFSWTGFYIGGQVGNFSSKVEIT 54
Query: 74 DT------INRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAK------------ 114
D ++ GI G N+ L + + G+ A
Sbjct: 55 DPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAEAI 114
Query: 115 ------------------------------DDSTFYRLKEKYFIYGDVVLKAGY-SVDSL 143
D L K G ++ G+ + D +
Sbjct: 115 GQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRIGFTAADRI 174
Query: 144 LIYGMGG 150
+ Y GG
Sbjct: 175 MPYVAGG 181
>gi|126736404|ref|ZP_01752146.1| outer membrane protein, putative [Roseobacter sp. CCS2]
gi|126714225|gb|EBA11094.1| outer membrane protein, putative [Roseobacter sp. CCS2]
Length = 211
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 61/198 (30%), Gaps = 15/198 (7%)
Query: 47 QDDEYGIWSGNYVGLHISRLYE-THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
WSG Y G + L L + G+ +Q DFV G
Sbjct: 27 PTVALADWSGAYAGAQLDVLTGDEVSLGFAAQSFEDVIETDTIISGFAGYQLQQGDFVIG 86
Query: 106 INCHTTAAKDDSTFYRLKEKYFI-YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
A + DV + GY + L+YG+ GF + ++D + +
Sbjct: 87 GELSLGQANGVRFEDVDGLDTDVRLVDVKARVGYDLGDALVYGVAGFSQSRLLDIDEDDL 146
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
E + + + V G G+DY V ++ A Y I + + ++
Sbjct: 147 EGLDLE--------TSTGVNYGFGVDYRVTEQFTVGAEYL-----IRELTAEDDVNEFFN 193
Query: 225 VDRKGNAHIASLGINMHF 242
+ +F
Sbjct: 194 ARVDTQFETFGVRAAFNF 211
>gi|261868235|ref|YP_003256157.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|2828561|gb|AAC00068.1| outer membrane protein 34 [Aggregatibacter actinomycetemcomitans]
gi|261413567|gb|ACX82938.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 346
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 60/191 (31%), Gaps = 15/191 (7%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G H L + + G+ G+ I F +
Sbjct: 28 FYAGAKAGWASSHHGLNQFKQKGVSINRNSEAYGVFGGYQITDN---FAVEAGYEYFGRS 84
Query: 117 STFYRLKEKYFIYG---DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+++ + LKA Y V D+L +YG G + + D
Sbjct: 85 KAKVNGAQRFRHTAHGTTLALKASYPVLDNLDVYGRVGAALIRSDYKVGQANKPD----- 139
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI-PHHIHSVNNSNAKSDVERVDRKGNA 231
R+ S V G++Y + +++L A Y+++ A +D +
Sbjct: 140 --RYHNLKVSPVFAGGVEYAILPELALRAEYQWVSRVGNLGRAEEKADRSARTIDYSPDI 197
Query: 232 HIASLGINMHF 242
++G++ F
Sbjct: 198 GSVAVGLSYRF 208
>gi|118588319|ref|ZP_01545728.1| probable heat resistant agglutinin 1 protein [Stappia aggregata IAM
12614]
gi|118439025|gb|EAV45657.1| probable heat resistant agglutinin 1 protein [Stappia aggregata IAM
12614]
Length = 256
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 67/243 (27%), Gaps = 27/243 (11%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++ + + A DL P V E G Y+ I P
Sbjct: 4 FAVALSTAAYAADLPTP------------VIEHIPEVPAVGGWYLRGDIGYKIYQAPDIK 51
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLED-----FVFGINCHTTAAKDDSTFYRLK-----E 124
Y+ + + G + D F A E
Sbjct: 52 YGTLDFYDEEMEGTFMMGAGVGYKFSDHFRTDFTIDYEFPAEAKSKGPCNLCGSPGYSVE 111
Query: 125 KYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
K I + GY + + + Y G G +YV S++ V +
Sbjct: 112 KADIDVWTFMLNGYVDIGTWNRITPYVGAGVGASYVTTSNINFVNPNGVAGTYEGDSKWN 171
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR-KGNAHIASLGIN 239
+ L G Y + +++L A YRY+ + R++ AH LG
Sbjct: 172 FAWALMAGASYDITPNLALDAGYRYLNIGDAHSAKFSTAGQNTRIEYEDLQAHEFRLGAR 231
Query: 240 MHF 242
F
Sbjct: 232 YTF 234
>gi|294627228|ref|ZP_06705815.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|294667706|ref|ZP_06732918.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292598467|gb|EFF42617.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292602546|gb|EFF45985.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 279
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 52/203 (25%), Gaps = 31/203 (15%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT---------TAAKDDST 118
T G LG++ Q ++V+G+ +A
Sbjct: 80 GGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDVRDSVSAFSTTPA 139
Query: 119 FYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
FY + + + GY+ L Y G S +++ ++ G
Sbjct: 140 FYTFTRQLNRTAALRGRIGYAFGTQGDYLAYITAGVARGEFDHSFASSNTANSFTSSGGD 199
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS--------------- 220
GIGL ++ +S+ Y +
Sbjct: 200 ---SADGYQAGIGLQRRLSDKVSVGVEYLFTRLQDDDTRVRVGPGTAPATNPFLRVNPAG 256
Query: 221 -DVERVDRKGNAHIASLGINMHF 242
D+ R D + + L F
Sbjct: 257 TDLRRTDTDVSTNAVRLTATYRF 279
>gi|312115944|ref|YP_004013540.1| hypothetical protein Rvan_3246 [Rhodomicrobium vannielii ATCC
17100]
gi|311221073|gb|ADP72441.1| hypothetical protein Rvan_3246 [Rhodomicrobium vannielii ATCC
17100]
Length = 292
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 68/247 (27%), Gaps = 68/247 (27%)
Query: 54 WSGNYVGLHISRL---------------------------YETHPLADT--INRKTYNSL 84
W+G Y+G ++ + P++D N+
Sbjct: 44 WTGFYLGGNVGGAFVDNNNKNRWDDGEGPWHNVWEKVDHKWTEVPVSDVDHFWGNRNNND 103
Query: 85 LPNGLGIELGHNIQL--EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS 142
G++ G N Q V G + + K G+ +
Sbjct: 104 SQFIGGVQAGFNWQRVGSPLVVGFEVDADFSDN----------VDYLVSARGKLGFGFQN 153
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG-------------RFDGHGSSVVLGIGL 189
+L+Y GG + + + + + G D + + V+G G+
Sbjct: 154 VLLYATGGGAWIGLNNDNKFGYDDTGWTSGWGDNVVDHTYTVSRRDNDKNFAGWVVGGGI 213
Query: 190 DY---------MVNYDISLSASYRYIPHHIHS-----VNNSNAKSDVERVDRKGNAHIAS 235
D+ M+ ++S Y + V N + + + +
Sbjct: 214 DFKPGSFGLLNMLGSNVSFGVLGLYYNFENANNRTWDVYNDDGQYWRYGNRDSLDFWTVT 273
Query: 236 LGINMHF 242
+N +F
Sbjct: 274 ARLNWNF 280
>gi|307246344|ref|ZP_07528422.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307255330|ref|ZP_07537142.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259780|ref|ZP_07541500.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306852754|gb|EFM84981.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306861717|gb|EFM93699.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866170|gb|EFM98038.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 369
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 31/208 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + + H + + + I +G+ +
Sbjct: 26 FYAGAKVGQSSFHHGVNQLKSGHDDRYNDKTRK-----YGINRNSVTYGVFGGYQILNQN 80
Query: 117 STFYRLKEKYFIYGDVVLKA-------------------GYSVDSLL-IYGMGGFGGAYV 156
+ + Y YG V Y V L +YG G
Sbjct: 81 NFGLAAELGYDYYGRVRGNVDEFRTVKHSAHGLNLALKPSYEVLPDLDVYGKVGIAVVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
++N+ + +F +S +LG G++Y + +++ Y+Y+ ++N +
Sbjct: 141 DYKKYG---AENTNESTTKFHKLKASTILGAGVEYAILPELAARVEYQYLN-KAGNLNKA 196
Query: 217 NAKSDVERVDRKG--NAHIASLGINMHF 242
+S + VD + + H + G++ F
Sbjct: 197 LVRSGTQDVDFQYAPDIHSVTAGLSYRF 224
>gi|289209494|ref|YP_003461560.1| OmpA domain protein transmembrane region-containing protein
[Thioalkalivibrio sp. K90mix]
gi|288945125|gb|ADC72824.1| OmpA domain protein transmembrane region-containing protein
[Thioalkalivibrio sp. K90mix]
Length = 215
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 70/194 (36%), Gaps = 16/194 (8%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSL-LPNGLGIELGHNIQLEDFVF-GINCHTTAA 113
G+YVG + + + + G+ G L++ ++ G+
Sbjct: 31 GSYVGGQLGWVGYDIDYREADDGGISGLSASGLTGGVMTGWGTVLDNGLYLGVEFDAQTE 90
Query: 114 KDDST----FYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDN 168
D T L + + G +V DS+L+YG+ G+ S + ++
Sbjct: 91 DADLTVRIDDAELGVDSKYSYGITGRLGTTVNDSVLLYGLAGY-----QRSRFDYRLTET 145
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
++ RF + +G+G++Y ++ + + A Y Y + + +
Sbjct: 146 DEDLSLRFKDSINGARIGVGVEYQLDNRLFMRAEYSYTFYESERYRIEDEF----TLRFD 201
Query: 229 GNAHIASLGINMHF 242
+A +LG+ F
Sbjct: 202 PDAQRFTLGLGYRF 215
>gi|90025228|gb|ABD85117.1| OmpA [Actinobacillus suis H91-0380]
Length = 373
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 67/208 (32%), Gaps = 29/208 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + H N K N N + I +G+ +
Sbjct: 28 AYAGAKVGWA-SFHEGVRQFNDKYSNDARYNSD--TTAYGINRNSVTYGVFGGYQILNQN 84
Query: 117 STFYRLKEKYFIYGDVVLKAG-------------------YSVDSLL-IYGMGGFGGAYV 156
+ + Y YG V G Y V L +YG G
Sbjct: 85 NFGLAAELGYDYYGRVRGNVGDFREFKHSAHGLNFALKPSYEVLPNLDVYGKVGVAVVRN 144
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
++N+ +F +S +LG G++Y + +++ Y+Y+ + N +
Sbjct: 145 DYKFYG---AENTNEPTEKFHKLKASTILGAGVEYAILPELAARIEYQYLN-KAGNFNKA 200
Query: 217 NAKSDVERVDRKG--NAHIASLGINMHF 242
+S + VD + + H + G++ F
Sbjct: 201 LVRSGTQDVDFQYAPDIHSVTAGLSYRF 228
>gi|323971797|gb|EGB67023.1| heat resistant agglutinin 1 [Escherichia coli TA007]
Length = 242
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 69/227 (30%), Gaps = 30/227 (13%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELG 94
Q G +G YV AD + + +G GI G
Sbjct: 17 SAQALADGSKTGFYVTGKAGTSVVSLSDQRFIDGEGEWADRYKGGDDHDTVFSG-GIAAG 75
Query: 95 HNI--QLE-------DFVFGINCHTTAAKDDSTFYRLKEKYFI-YGDVVLKAGYSVDS-- 142
++ Q +F T + K + ++L A Y +
Sbjct: 76 YDFYPQFSIPVRTELEFYARGKADTKYNLYKDDWSHDDLKSEVSVNTLMLNAYYDFRNDS 135
Query: 143 -LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD------GHGSSVVLGIGLDYMVNY 195
+ G G A + + D GR + LG G+ Y V
Sbjct: 136 AFTPWVSAGIGYARIHQKTTGISTWDYGYGYSGRESLSHSDSADNFAWSLGAGVRYDVTP 195
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
DI+L SYRYI SV+ + D + + +H LG+ +F
Sbjct: 196 DIALDLSYRYIDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 242
>gi|254485896|ref|ZP_05099101.1| outer membrane protein, putative [Roseobacter sp. GAI101]
gi|214042765|gb|EEB83403.1| outer membrane protein, putative [Roseobacter sp. GAI101]
Length = 198
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 60/218 (27%), Gaps = 31/218 (14%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQD-DEYGIWSGNYVGLHISRLYETHPLAD 74
+ +V + + A + + E + G W+G Y GL + P
Sbjct: 10 AALVASSAFAGSAFAGSLSEPVVEPVMMEPVPVVNTGGDWTGFYTGLQLGYADADGPGNL 69
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
+ +Y G G+N FV G D +
Sbjct: 70 DGDNGSY--------GFHAGYNYDFGRFVAGAELDYDKTDID--LNNGAATIDSVARAKV 119
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
K GY + ++Y GG+ A G GIG+ Y V+
Sbjct: 120 KGGYDFGNYMLYATGGYAQADTTL-------------------GDEDGAFYGIGMTYRVS 160
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
S+ A S + D +G+ H
Sbjct: 161 ETYSVGAELLEHRFSDVG-GVSGSDLDATTFTVRGSMH 197
>gi|190150781|ref|YP_001969306.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307264101|ref|ZP_07545698.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|189915912|gb|ACE62164.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306870579|gb|EFN02326.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 369
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 68/208 (32%), Gaps = 31/208 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + + H + + + I +G+ +
Sbjct: 26 FYAGAKVGQSSFHHGVNQLKSGHDDRYNDKTRK-----YGINRNSVTYGVFGGYQILNQN 80
Query: 117 STFYRLKEKYFIYGDVVLKAG-------------------YSVDSLL-IYGMGGFGGAYV 156
+ + Y YG V G Y V L +YG G
Sbjct: 81 NFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNFALKPSYEVLPDLDVYGKVGVAVVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S ++N+ +F +S +LG G++Y + +++ Y+Y+ ++N +
Sbjct: 141 DYKSYG---AENTNEPTEKFHKLKASTILGAGVEYAILPELAARVEYQYLN-KAGNLNKA 196
Query: 217 NAKSDVERVDRKG--NAHIASLGINMHF 242
+S + VD + + H + G++ F
Sbjct: 197 LVRSGTQDVDFQYAPDIHSVTAGLSYRF 224
>gi|218700524|ref|YP_002408153.1| outer membrane protein A [Escherichia coli IAI39]
gi|331646217|ref|ZP_08347320.1| outer membrane protein A [Escherichia coli M605]
gi|218370510|emb|CAR18317.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI39]
gi|331044969|gb|EGI17096.1| outer membrane protein A [Escherichia coli M605]
Length = 374
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 52 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 106
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 107 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 159
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 160 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 209
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 210 MLSLGVSYRF 219
>gi|1136304|gb|AAB06592.1| tia invasion determinant [Escherichia coli ETEC H10407]
Length = 251
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 65/232 (28%), Gaps = 34/232 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL---YETHPLADTINRKTYNSLLPN------GLGIELGH 95
Q +G YV Y + G G+ +G+
Sbjct: 20 SAQALADESKTGFYVTGKAGASVVMQTDQRFRQDFGDDVYKYKGGDKNDTVFGAGLAVGY 79
Query: 96 N-IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG--------------DVVLKAGYSV 140
+ Q + + Y L G +++ Y
Sbjct: 80 DFYQHYNVPVRTEVEFYGRGAADSRYTLDTWRSPMGDGGREDTQNRLSVNTLMVNTYYDF 139
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-------GHGSSVVLGIGLD 190
+ + G G A V + S N + + +G G+
Sbjct: 140 RNSSAFTPWVSVGLGYARVHHKATYIDTSWNESGEISDISALHYSGYDNNFAWSIGAGVR 199
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y V DI+L SYRY+ S++ + + D + + +H LG+ HF
Sbjct: 200 YDVTPDIALDLSYRYLDAGKSSLSYKDTEGDKYKSEADVKSHDIMLGVTYHF 251
>gi|26246978|ref|NP_753018.1| outer membrane protein A [Escherichia coli CFT073]
gi|26107378|gb|AAN79561.1|AE016758_165 Outer membrane protein A precursor [Escherichia coli CFT073]
Length = 379
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 57 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 111
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 112 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 164
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 165 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 214
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 215 MLSLGVSYRF 224
>gi|148255369|ref|YP_001239954.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
BTAi1]
gi|146407542|gb|ABQ36048.1| putative outer-membrane immunogenic protein precursor
[Bradyrhizobium sp. BTAi1]
Length = 262
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/261 (11%), Positives = 63/261 (24%), Gaps = 34/261 (13%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L V + + A DL W+G Y+
Sbjct: 2 KKLLLAVTAMAAMTGTASAADLAA--------RPYTKAPIAAPLAPSWTGFYIFGGGGGG 53
Query: 67 YETHPLADTINRKT--------YNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDS 117
+ G++ Q+ +V G
Sbjct: 54 LWNADTTINSTATGAALIGLNQKQGGEGWFGTVGAGYDWQVNPTWVIGAFADGQFGSIKG 113
Query: 118 T------FYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
T K V + GY V ++L Y G+ ++ ++L + +
Sbjct: 114 TIQDQGALIAGNIKNDYSWAVGGRVGYLVAPNVLSYVNAGYSSSHWKGTTLLSTVTGGAS 173
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYRYIPHHIHSVN---NSNAKSD 221
S +G G++ +N + YR + +++ ++
Sbjct: 174 GLHTD-GFDRSGWFIGGGVENNLNIFGISAPGWFMKTEYRSAFYDRKNISERVDTTNALF 232
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ K S + F
Sbjct: 233 GRDITFKPWVQTISTSLVYRF 253
>gi|331650258|ref|ZP_08351330.1| adhesin/virulence factor Hek [Escherichia coli M605]
gi|331040652|gb|EGI12810.1| adhesin/virulence factor Hek [Escherichia coli M605]
Length = 263
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 69/231 (29%), Gaps = 34/231 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELG 94
Q +G YV + + +G GI G
Sbjct: 34 STQALADESKTGFYVTGKAGASVMSLADQRFLSGDGEETSKYKGGDGHDTVFSG-GIAAG 92
Query: 95 HNI--QLE-------DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSV 140
++ Q +F + D ++ + + ++L A Y
Sbjct: 93 YDFYPQFSIPVRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDF 152
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDY 191
+ + G G A + + D + GR S LG G+ Y
Sbjct: 153 RNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSLGAGVRY 212
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V DI+L SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 213 DVTPDIALDLSYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 263
>gi|45758061|gb|AAO85789.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 373
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 64/215 (29%), Gaps = 40/215 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G L + I+ G N +G+ +
Sbjct: 26 FYAGAKAGWASFHDGLTQF-----DHKKDGGEFSIQYGIN--RNSVTYGVFGGYQILNQN 78
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVD--------------------------SLLIYGMGG 150
+ + Y +G V ++ D +L +YG G
Sbjct: 79 NFGLATELGYDYFGRVRGNTTFAGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVG 138
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--- 207
V+ +K+++ + S++LG GL+Y + +++ Y+Y+
Sbjct: 139 VALVRNDY----YVQQRVAKDSRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVG 194
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +V + + + H S G++ F
Sbjct: 195 NLDKAVRKTVSLPTGTNFQYSPDIHSVSAGLSYRF 229
>gi|167622915|ref|YP_001673209.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167352937|gb|ABZ75550.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 356
Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/233 (14%), Positives = 68/233 (29%), Gaps = 38/233 (16%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
SI + + LYL E DN+ + + Y+G +++ +
Sbjct: 6 SIANVSIVFSTLLYLSLGAVYAAETDNSEAANEFDPY----FYLGAKAGQMHYQNACESW 61
Query: 76 INRKTYNSLLPNGLGIELGHN-IQL----EDFVFGINCHTTAAKDDSTFYRLKEKYFIYG 130
N + G G +G+ Q ++ ++
Sbjct: 62 SISCDGNDV---GFGGFVGYQAWQYLGFETAYLDLGEAVAHYSESGVNNTYTGSMKGWEI 118
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
V + S +S ++ G + + R + +LG G++
Sbjct: 119 SAVTRFSLS-ESFELFAKAGSVYWDGDNR-----------GPQSRNSDSDWAPMLGAGVE 166
Query: 191 YMVNYDISLSASYRYIP-HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y ++ Y+YI + SN H+ +LGI+ F
Sbjct: 167 YQLSPSWVARLEYQYIDSLGSDLIGGSNG-------------HLTTLGISYRF 206
>gi|45758047|gb|AAO85782.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 61/217 (28%), Gaps = 39/217 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G L N Y LGI LG N +G+ +
Sbjct: 26 FYAGAKAGWASFHDGLTQFDNTYDYG--SGINLGINLGIN--RNSVTYGVFGGYQILNQN 81
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVD--------------------------SLLIYGMGG 150
+ + Y +G V +S D +L +YG G
Sbjct: 82 NFGLATELGYDYFGRVRGNTTFSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVG 141
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--- 207
V+ K+++ + S++LG GL+Y + +++ Y+Y+
Sbjct: 142 VALVRNDY----YVQQHVDKDSRIKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVG 197
Query: 208 --HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ H S G++ F
Sbjct: 198 NLDKAVRTTVGYLIPRGTNFQYSPDIHSVSAGLSYRF 234
>gi|758341|emb|CAA26037.1| outer membrane protein (ompA) [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 350
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 59/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 28 WYAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + L + GG +S+
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDFYTRLGGMVW-------RADTKSNVPGGP 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 STKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 186 LLSVGVSYRF 195
>gi|161614736|ref|YP_001588701.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168821824|ref|ZP_02833824.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|238911107|ref|ZP_04654944.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|161364100|gb|ABX67868.1| hypothetical protein SPAB_02488 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205341689|gb|EDZ28453.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320085284|emb|CBY95068.1| Outer membrane protein A Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 369
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + IN G G G+ Q+ +V G
Sbjct: 47 WYAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 101
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+
Sbjct: 102 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGP 154
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 155 STKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 204
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 205 LLSVGVSYRF 214
>gi|46203394|ref|ZP_00051591.2| hypothetical protein Magn03005785 [Magnetospirillum magnetotacticum
MS-1]
Length = 299
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 69/284 (24%), Gaps = 85/284 (29%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI------------------ 76
DL A +Q W+G Y G++ + T
Sbjct: 22 DLPRRAAPPPVFQPVPVFTWTGFYAGINAGYGFNTRDNNSPTVIGVPASAGVFASSAPAL 81
Query: 77 -----NRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDSTFYRLKEKY-- 126
NS G ++G+N Q FV G+ A R
Sbjct: 82 TSGVIAFSNRNSNEGFVGGGQIGYNYQFTPGSGFVIGVEADAQYADFGRNRNRYAFATTT 141
Query: 127 --------------------FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+G V + GY+ D L+YG GGF
Sbjct: 142 GTGGIIPGTLVYNPSGLSGLDYFGTVRGRLGYAFDRTLVYGTGGFAYGSGGGREFGT--- 198
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHH------I 210
+ + G G++Y + + ++L Y+
Sbjct: 199 ------GVSSNDFQTGWAAGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRGGGALR 252
Query: 211 HSVNNSNAKSDVERV------------DRKGNAHIASLGINMHF 242
+ +NA + + + G+N F
Sbjct: 253 GAFAVNNAGATITTSTPGVVVVSGAPRRNDTEFAVVRAGLNYKF 296
>gi|170750729|ref|YP_001756989.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170657251|gb|ACB26306.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 314
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 53/218 (24%), Gaps = 72/218 (33%)
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL--------------------- 122
G G N+Q + V GI T +S
Sbjct: 97 TRGASFGAFAGFNVQFDGIVLGIEADYTHTDQNSWSTNGINRIMTTAAGNSESVNLSGTS 156
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD----- 177
+ YG + +AGY+ +LL Y G V + V++ +
Sbjct: 157 NTRIEDYGTIRGRAGYAFGNLLPYVTAGAAIGRVTINDTVSVQNYGYSATTYAANQALTT 216
Query: 178 ----------------------------------------------GHGSSVVLGIGLDY 191
V LG GL+Y
Sbjct: 217 GQPAAVYQHGYASFNPNFPLNNSTPAGQGAQTVPYAPTPLTANARTKTIGGVALGFGLEY 276
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +I + Y+Y+ + +N+ + K
Sbjct: 277 AITPNILVRGEYQYVRFQDFNGHNAQLNTVRGGAAVKF 314
>gi|5833214|gb|AAD53408.1|AF133259_1 outer membrane protein PomA [Mannheimia haemolytica]
gi|45758045|gb|AAO85781.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
gi|45758049|gb|AAO85783.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 61/217 (28%), Gaps = 39/217 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G L N Y LGI LG N +G+ +
Sbjct: 26 FYAGAKAGWASFHDGLTQFDNTYDYG--SGINLGINLGIN--RNSVTYGVFGGYQILNQN 81
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVD--------------------------SLLIYGMGG 150
+ + Y +G V +S D +L +YG G
Sbjct: 82 NFGLATELGYDYFGRVRGNTTFSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVG 141
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--- 207
V+ K+++ + S++LG GL+Y + +++ Y+Y+
Sbjct: 142 VALVRNDY----YVQQHVDKDSRIKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVG 197
Query: 208 --HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ H S G++ F
Sbjct: 198 NLDKAVRTTVGYLIPRGTNFQYSPDIHSVSAGLSYRF 234
>gi|195874240|ref|ZP_02701347.2| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195630051|gb|EDX48703.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 358
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + IN G G G+ Q+ +V G
Sbjct: 36 WYAGAKLG--WSQYHDTGFINNDGPTDENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGP 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 STKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 194 LLSVGVSYRF 203
>gi|45758051|gb|AAO85784.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 59/217 (27%), Gaps = 39/217 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G L N Y GI G N +G+ +
Sbjct: 26 FYAGAKAGWASFHDGLTQFDNTYDYG--SGINFGINFGIN--RNSVTYGVFGGYQILNQN 81
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVD--------------------------SLLIYGMGG 150
+ + Y +G V +S D +L +YG G
Sbjct: 82 NFGLATELGYDYFGRVRGNTTFSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVG 141
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--- 207
V+ K+++ + S++LG GL+Y + +++ Y+Y+
Sbjct: 142 VALVRNDY----YVQQHVDKDSRIKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVG 197
Query: 208 --HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ H S G++ F
Sbjct: 198 NLDKAVRTTVGYLIPRGTNFQYSPDIHSVSAGLSYRF 234
>gi|170738817|ref|YP_001767472.1| porin [Methylobacterium sp. 4-46]
gi|168193091|gb|ACA15038.1| porin [Methylobacterium sp. 4-46]
Length = 302
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 63/270 (23%), Gaps = 91/270 (33%)
Query: 54 WSGNYVGLHISRLYETHPLAD--------------------TINRKTYNSLLPNGLGIEL 93
W+G Y G + ++ I + G ++
Sbjct: 40 WTGFYAGFNAGYGFDASSTNPDVIVLTRDPRVVAGPAGSALAIGWTGDRNTEGFSGGGQI 99
Query: 94 GHNIQLED---FVFGINCHTTAAKDDSTFYRLK-------------------------EK 125
G+N Q V GI
Sbjct: 100 GYNYQFTPGAGVVVGIEADAQYVDFGRNRNAFSFAIPNQPGAQFNGANGLRLFDPRGLSG 159
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
+G V + GY+ D +L YG GGF ++ D +
Sbjct: 160 LDYFGTVRGRLGYAFDRVLFYGTGGFAYGGGGGTNFGLP----------NTDDFQTGWTA 209
Query: 186 GIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSNAKSDVERV---------- 225
G G++Y + + ++L Y+ + N + A + +
Sbjct: 210 GGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRNRRNGAYAFDNAGVIVAGLPNSIIL 269
Query: 226 -------------DRKGNAHIASLGINMHF 242
R + G+N F
Sbjct: 270 SNTAGFPAVGNLARRNTEFAVVRAGLNYKF 299
>gi|284007554|emb|CBA73076.1| outer membrane protein A [Arsenophonus nasoniae]
Length = 353
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 54/193 (27%), Gaps = 27/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTIN---RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + G G LG+ Q + G
Sbjct: 32 WYTGAKLGWSHFEDTGFHPYGDNVGSGKTKRDQLGAGAYLGY--QHNQY-LGFELGYDWF 88
Query: 114 K-DDSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNS 169
+ G + + Y + D L +Y GG +++
Sbjct: 89 GRMRYSGQPNNGSLKSMGVQLTARLSYPLTDELDVYTRLGGMVW-------RTDAKANVE 141
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ G S V +G +Y + + + Y+++ H D + + +
Sbjct: 142 NQPSFKEHDTGVSPVYALGFEYAITPEWATRLDYQWVSH----------IGDKDSLSVRP 191
Query: 230 NAHIASLGINMHF 242
+ + S+G+ F
Sbjct: 192 DNGMLSVGVAYRF 204
>gi|27379465|ref|NP_770994.1| hypothetical protein bll4354 [Bradyrhizobium japonicum USDA 110]
gi|27352617|dbj|BAC49619.1| bll4354 [Bradyrhizobium japonicum USDA 110]
Length = 279
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 66/260 (25%), Gaps = 35/260 (13%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+ + + + A DL W+G Y+
Sbjct: 21 KKILLALTAVAAMTGSASAADLAA--------RPYVKAPMAAP-VANWTGFYIFGGGGGG 71
Query: 67 YETHP-------LADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDST 118
+ + LG++ Q +V G+ +T
Sbjct: 72 LSNADQSVVDTVTGTPLTITQRQGGSGWFGTVGLGYDWQFSGTWVAGVFADGQFGSIRAT 131
Query: 119 ------FYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+K ++ G+ V ++L Y GG+ GA+ ++ +
Sbjct: 132 IQDPIFGITGNQKLEDSWAAGVRLGWLVAPNVLSYVNGGYSGAHFGQTNFTDLAGVPVGA 191
Query: 172 AKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYR---YIPHHIHSVNNSNAKSDV 222
+ + +G G++ +N + YR Y + ++ V
Sbjct: 192 HLA--SYNRNGWFIGGGVENSLNIFGITSPGWFMKTEYRSAFYNAKTQTELLDAGNVPLV 249
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ S + F
Sbjct: 250 NSIRANSWNQTVSTSLVYRF 269
>gi|332279861|ref|ZP_08392274.1| outer membrane protein A [Shigella sp. D9]
gi|332102213|gb|EGJ05559.1| outer membrane protein A [Shigella sp. D9]
Length = 374
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 52 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 106
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +++ A
Sbjct: 107 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKANVPGGA 159
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 160 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 209
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 210 MLSLGVSYRF 219
>gi|168237123|ref|ZP_02662181.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194734413|ref|YP_002114070.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|194709915|gb|ACF89136.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289811|gb|EDY29172.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|322616444|gb|EFY13353.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322619695|gb|EFY16570.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322622609|gb|EFY19454.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629758|gb|EFY26533.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632520|gb|EFY29266.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636985|gb|EFY33688.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641475|gb|EFY38113.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646058|gb|EFY42574.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649640|gb|EFY46071.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654059|gb|EFY50382.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658591|gb|EFY54853.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663448|gb|EFY59650.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670184|gb|EFY66324.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671420|gb|EFY67542.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676776|gb|EFY72843.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682700|gb|EFY78719.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686380|gb|EFY82362.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323195127|gb|EFZ80309.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199809|gb|EFZ84898.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202802|gb|EFZ87838.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209073|gb|EFZ94010.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213664|gb|EFZ98452.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217967|gb|EGA02682.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221999|gb|EGA06386.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226572|gb|EGA10777.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323229768|gb|EGA13891.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323232993|gb|EGA17089.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240728|gb|EGA24770.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243044|gb|EGA27065.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249793|gb|EGA33695.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252735|gb|EGA36573.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323259149|gb|EGA42793.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259972|gb|EGA43600.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323268028|gb|EGA51507.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269876|gb|EGA53325.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 369
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 62/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + IN G G G+ Q+ +V G
Sbjct: 47 WYAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 101
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+ A
Sbjct: 102 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGA 154
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 155 STKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 204
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 205 LLSVGVSYRF 214
>gi|320196555|gb|EFW71178.1| Outer membrane protein A precursor [Escherichia coli WV_060327]
gi|330910729|gb|EGH39239.1| outer membrane protein A precursor [Escherichia coli AA86]
Length = 358
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 194 MLSLGVSYRF 203
>gi|194443312|ref|YP_002040273.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|200390100|ref|ZP_03216711.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205357270|ref|ZP_02346426.2| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|194401975|gb|ACF62197.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|199602545|gb|EDZ01091.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205322778|gb|EDZ10617.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 358
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + IN G G G+ Q+ +V G
Sbjct: 36 WYAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGP 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 STKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 194 LLSVGVSYRF 203
>gi|161503852|ref|YP_001570964.1| outer membrane protein A [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160865199|gb|ABX21822.1| hypothetical protein SARI_01940 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 358
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+ A
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNTPGGA 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 SYKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 194 LLSVGVSYRF 203
>gi|326387856|ref|ZP_08209462.1| porin [Novosphingobium nitrogenifigens DSM 19370]
gi|326207902|gb|EGD58713.1| porin [Novosphingobium nitrogenifigens DSM 19370]
Length = 200
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 64/194 (32%), Gaps = 31/194 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKT----YNSLLPNGLGIELGHNIQ-LEDFVFGINCHT 110
G ++G +E + + + Y + LG+ +G + + L++FV G
Sbjct: 31 GPFIGAQGG--WEENSVNNPSTGVGPTNLYGTGDTGTLGVFVGQDYRILKNFVIGGQAEV 88
Query: 111 TA-AKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDN 168
T D+ L+AGY + D L+Y GG+ +
Sbjct: 89 NFPINSHITDGTTTVDPKRSVDLSLRAGYVLRDKTLLYVRGGYSNVRASTIINAETPIY- 147
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
G + +LG G++ V I+ YRY + K
Sbjct: 148 -------VSGSQNGWMLGGGIEQYVTKHITGRMEYRYTNLSEGA--------------GK 186
Query: 229 GNAHIASLGINMHF 242
+ H LG+ HF
Sbjct: 187 FDRHQLLLGVAYHF 200
>gi|309704068|emb|CBJ03414.1| heat resistant agglutinin 1 [Escherichia coli ETEC H10407]
Length = 248
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 65/232 (28%), Gaps = 34/232 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL---YETHPLADTINRKTYNSLLPN------GLGIELGH 95
Q +G YV Y + G G+ +G+
Sbjct: 17 SAQALADESKTGFYVTGKAGASVVMQTDQRFRQDFGDDVYKYKGGDKNDTVFGAGLAVGY 76
Query: 96 N-IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG--------------DVVLKAGYSV 140
+ Q + + Y L G +++ Y
Sbjct: 77 DFYQHYNVPVRTEVEFYGRGAADSRYTLDTWRSPMGDGGREDTQNRLSVNTLMVNTYYDF 136
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-------GHGSSVVLGIGLD 190
+ + G G A V + S N + + +G G+
Sbjct: 137 RNSSAFTPWVSVGLGYARVHHKATYIDTSWNESGEISDISALHYSGYDNNFAWSIGAGVR 196
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y V DI+L SYRY+ S++ + + D + + +H LG+ HF
Sbjct: 197 YDVTPDIALDLSYRYLDAGKSSLSYKDTEGDKYKSEADVKSHDIMLGVTYHF 248
>gi|224584423|ref|YP_002638221.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468950|gb|ACN46780.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 358
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + IN G G G+ Q+ +V G
Sbjct: 36 WYAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGP 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 STKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 194 LLSVGVSYRF 203
>gi|89052836|ref|YP_508287.1| hypothetical protein Jann_0345 [Jannaschia sp. CCS1]
gi|88862385|gb|ABD53262.1| hypothetical protein Jann_0345 [Jannaschia sp. CCS1]
Length = 206
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 50/186 (26%), Gaps = 22/186 (11%)
Query: 34 IDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIEL 93
+ + A + W+G Y G + + + + S G+
Sbjct: 20 GGVVDPAPLDPVIISQPDHDWTGFYAGAQLDLVANAETTLEPFGQ--LMSFNGELAGLFA 77
Query: 94 GHNIQLEDFVFGINCHT--TAAKDDSTFYRLKEKYFIYGDVVLK----AGYSVDSLLIYG 147
G+ D V G D + +L+ GY + L Y
Sbjct: 78 GYRYDFGDIVLGGEIDYMRGTYDVDEIAPNILLLSPEVDVELLRAGIEVGYDLGDFLPYA 137
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G+ + + G GIG DY V+ ++++ A +
Sbjct: 138 TAGYAHLTLDYGGFG--------------EDSGDGWFAGIGADYRVSENVTVGAELLHHQ 183
Query: 208 HHIHSV 213
+
Sbjct: 184 FEFNDF 189
>gi|77463270|ref|YP_352774.1| outer membrane protein [Rhodobacter sphaeroides 2.4.1]
gi|77387688|gb|ABA78873.1| possible outer membrane protein [Rhodobacter sphaeroides 2.4.1]
Length = 200
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 50/190 (26%), Gaps = 34/190 (17%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSG YVG + + D G+ G+ V G
Sbjct: 45 DWSGFYVGGQLGYGKVDTNIDDL-------DGNGAIGGLHAGYRYDFGRAVVGAELAYDV 97
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D + + L AG + L+Y G A +
Sbjct: 98 TNIDLDGIP-DSELDNVTTLKLMAGGKMGKGLLYATAGGSWAD---------------AS 141
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G D + V GIG DYMVN S+ A + D + +A
Sbjct: 142 IGGADVSDNGYVYGIGYDYMVNDRWSVGAE-----------LLRHTWDDFDDSGVDVDAT 190
Query: 233 IASLGINMHF 242
+ F
Sbjct: 191 TLQAKVGFRF 200
>gi|170681860|ref|YP_001744213.1| outer membrane protein A [Escherichia coli SMS-3-5]
gi|170519578|gb|ACB17756.1| outer membrane protein A [Escherichia coli SMS-3-5]
Length = 358
Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+ A
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGA 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 STKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 194 MLSLGVSYRF 203
>gi|323160774|gb|EFZ46709.1| ompA-like transmembrane domain protein [Escherichia coli E128010]
Length = 251
Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 67/232 (28%), Gaps = 34/232 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISR---LYETHPLADTINRKTYNSLLPN------GLGIELGH 95
Q +G YV + Y + G G+ +G+
Sbjct: 20 SAQALADENKTGFYVTGKAGASVVAQTDQRFRQDLGEDVYKYKGGDKNDTVFGEGLAVGY 79
Query: 96 N-IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG--------------DVVLKAGYSV 140
+ Q + + Y L + G +++ Y
Sbjct: 80 DFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGNGGREDTQNRLSVNTLMVNTYYDF 139
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-------GHGSSVVLGIGLD 190
+ + G G A V + S N + + +G G+
Sbjct: 140 RNSSAFTPWVSVGLGYARVHHKATYTDTSRNESGEISDISELHYSGYDNNFAWSIGAGVR 199
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y V DI+L SYRY+ S++ +A+ D + + +H G+ +F
Sbjct: 200 YDVTPDIALDLSYRYLDAGKFSLSYKDAEEDKYKSEVDVKSHDIMFGVTYNF 251
>gi|284922912|emb|CBG36001.1| heat resistant agglutinin 1 [Escherichia coli 042]
Length = 263
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/231 (16%), Positives = 68/231 (29%), Gaps = 34/231 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELG 94
Q +G YV + + +G GI G
Sbjct: 34 STQALADESKTGFYVTGKAGASVMSLADQRFLSGDGEETSKYKGGDGHDTVFSG-GIAAG 92
Query: 95 HNI--QLE-------DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSV 140
++ Q +F + D ++ + + ++L A Y
Sbjct: 93 YDFYPQFSIPVRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDF 152
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDY 191
+ + G G A + + D + GR S G G+ Y
Sbjct: 153 RNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSFGAGVRY 212
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V DI+L SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 213 DVTPDIALDLSYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 263
>gi|149201160|ref|ZP_01878135.1| possible outer membrane protein [Roseovarius sp. TM1035]
gi|149145493|gb|EDM33519.1| possible outer membrane protein [Roseovarius sp. TM1035]
Length = 197
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 50/180 (27%), Gaps = 29/180 (16%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTT 111
W+G Y G + D G+ G++ + +V G+
Sbjct: 46 NWTGFYAGGQLGYG-------DVDTGAAGVDGDGLIGGLIAGYDYDYGNNWVVGLGLDYD 98
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A D + + GY V + L+YG GG+ A
Sbjct: 99 FADID---LGAAASLEDVFRIKSRLGYKVGNGLLYGTGGYAWADTDTL------------ 143
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G + G G ++M++ ++SL Y + + +
Sbjct: 144 ------GDDNGYFFGAGYEHMISQNLSLGGEVLYHKFENFGTAGVDVDATTVQARAAFRF 197
>gi|291085616|ref|ZP_06353500.2| outer membrane protein A [Citrobacter youngae ATCC 29220]
gi|291070418|gb|EFE08527.1| outer membrane protein A [Citrobacter youngae ATCC 29220]
Length = 360
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 60/195 (30%), Gaps = 34/195 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + IN G G G+ Q+ +V G
Sbjct: 36 WYAGAKLGWSQYHDIGNNQINNAGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 92
Query: 115 -----DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESD 167
D T K + K GY + D L +Y GG +D
Sbjct: 93 PYKGYTDETHNNGAFKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------AD 140
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
N + G S V G++Y + +I+ Y++ +N D V
Sbjct: 141 AKNNTGFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTVGG 190
Query: 228 KGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 191 RPDNGLLSVGVSYRF 205
>gi|300937693|ref|ZP_07152496.1| outer membrane protein A [Escherichia coli MS 21-1]
gi|301023085|ref|ZP_07186892.1| outer membrane protein A [Escherichia coli MS 69-1]
gi|300397206|gb|EFJ80744.1| outer membrane protein A [Escherichia coli MS 69-1]
gi|300457294|gb|EFK20787.1| outer membrane protein A [Escherichia coli MS 21-1]
Length = 358
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 194 MLSLGVSYRF 203
>gi|256018784|ref|ZP_05432649.1| outer membrane protein A [Shigella sp. D9]
Length = 369
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 47 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 101
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +++ A
Sbjct: 102 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKANVPGGA 154
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 155 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 204
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 205 MLSLGVSYRF 214
>gi|218553544|ref|YP_002386457.1| outer membrane protein A [Escherichia coli IAI1]
gi|331676747|ref|ZP_08377443.1| outer membrane protein A [Escherichia coli H591]
gi|218360312|emb|CAQ97862.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI1]
gi|331075436|gb|EGI46734.1| outer membrane protein A [Escherichia coli H591]
Length = 374
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 52 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 106
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +++ A
Sbjct: 107 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKANVPGGA 159
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 160 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 209
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 210 LLSLGVSYRF 219
>gi|183598397|ref|ZP_02959890.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827]
gi|188020575|gb|EDU58615.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827]
Length = 357
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 60/194 (30%), Gaps = 28/194 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKT----YNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + ++R+ G G G+ + G
Sbjct: 28 WYTGAKLGWSHYEDTSFTPVDRENTVGKSTDRDTFGAGAYAGYQY---NQYMGFELGYDW 84
Query: 113 -AKDDSTFYRLKEKYFIYG-DVVLKAGYS-VDSLLIYGM-GGFGGAYVIDSSLEKVESDN 168
K G + K Y +D L +Y GG V++
Sbjct: 85 FGKMKYKGAGNNGDLKSMGVSLTTKLSYPVMDDLDVYTRLGGMVW-------RTDVKAHQ 137
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ + + + G S V +G++Y + + + Y+++ + D + + +
Sbjct: 138 TGEDRYKENDTGVSPVYALGVEYAITPNWATRLDYQWV----------SNIGDNDNLGVR 187
Query: 229 GNAHIASLGINMHF 242
+ + S+G+ F
Sbjct: 188 PDNGMLSVGLAYRF 201
>gi|45758065|gb|AAO85791.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 367
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/214 (13%), Positives = 63/214 (29%), Gaps = 44/214 (20%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG ++ GI +G+ +
Sbjct: 26 FYVGAKAGWASFHD------GLTQFDHKDGGEFGIN------RNSVTYGVFGGYQILNQN 73
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVD--------------------------SLLIYGMGG 150
+ + Y +G V ++ D +L +YG G
Sbjct: 74 NFGLATELGYDYFGRVRGNTTFAGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVG 133
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--H 208
V+ + +K+++ + S++LG GL+Y + +++ Y+Y+
Sbjct: 134 VALVRNDY----YVQQNVAKDSRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVG 189
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ A + + H S G++ F
Sbjct: 190 NLDKAARKTANIEGTNFQYSPDIHSVSAGLSYRF 223
>gi|227884084|ref|ZP_04001889.1| OOP family OmpA-OmpF porin [Escherichia coli 83972]
gi|300978356|ref|ZP_07174229.1| outer membrane protein A [Escherichia coli MS 45-1]
gi|301047785|ref|ZP_07194839.1| outer membrane protein A [Escherichia coli MS 185-1]
gi|227838836|gb|EEJ49302.1| OOP family OmpA-OmpF porin [Escherichia coli 83972]
gi|300300348|gb|EFJ56733.1| outer membrane protein A [Escherichia coli MS 185-1]
gi|300409701|gb|EFJ93239.1| outer membrane protein A [Escherichia coli MS 45-1]
gi|315291176|gb|EFU50536.1| outer membrane protein A [Escherichia coli MS 153-1]
Length = 358
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 194 MLSLGVSYRF 203
>gi|221639135|ref|YP_002525397.1| outer membrane protein [Rhodobacter sphaeroides KD131]
gi|221159916|gb|ACM00896.1| outer membrane protein [Rhodobacter sphaeroides KD131]
Length = 200
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 50/190 (26%), Gaps = 34/190 (17%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSG YVG + + D G+ G+ V G
Sbjct: 45 DWSGFYVGGQLGYGKVDTNIDDL-------DGNGAIGGLHAGYRYDFGRAVVGAELAYDV 97
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D + + L AG + L+Y G A +
Sbjct: 98 TNIDLDGIP-DSEVDNVTTLKLMAGGKMGKGLLYATAGGSWAD---------------AS 141
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G D + V GIG DYMVN S+ A + D + +A
Sbjct: 142 IGGADVSDNGYVYGIGYDYMVNDRWSVGAE-----------LLRHTWDDFDDSGVDVDAT 190
Query: 233 IASLGINMHF 242
+ F
Sbjct: 191 TLQAKVGFRF 200
>gi|303250857|ref|ZP_07337050.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253079|ref|ZP_07534962.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302650272|gb|EFL80435.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859448|gb|EFM91478.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 371
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 69/208 (33%), Gaps = 29/208 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + H N K N N LG N +G+ +
Sbjct: 26 FYAGAKVGWA-TFHEGVRQFNDKYSNDARYNQDTTNLGIN--RNSVTYGVFGGYQILNQN 82
Query: 117 STFYRLKEKYFIYGDVVLKAG-------------------YSVDSLL-IYGMGGFGGAYV 156
+ + Y YG V G Y V L +YG G
Sbjct: 83 NFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVAVVRN 142
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
++N+ +F +S +LG G++Y + +++ Y+Y+ ++N +
Sbjct: 143 DYKEYG---AENTNEPTEKFHKLKASTILGAGVEYAILPELAARIEYQYLN-KAGNLNKA 198
Query: 217 NAKSDVERVDRKG--NAHIASLGINMHF 242
+S + VD + + H + G++ F
Sbjct: 199 LVRSGTQDVDFQYAPDIHSVTAGLSYRF 226
>gi|168233443|ref|ZP_02658501.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194472870|ref|ZP_03078854.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197248715|ref|YP_002145940.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|194459234|gb|EDX48073.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197212418|gb|ACH49815.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205332492|gb|EDZ19256.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 371
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 22/189 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + IN G G G+ Q+ +V G
Sbjct: 47 WYAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 101
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ Y G + K GY + D L +Y G ++ + K A
Sbjct: 102 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLG----GMVWRADTKSNVPGPGGAS 157
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ G S V G++Y + +I+ Y++ +N D + + + +
Sbjct: 158 NKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNGL 207
Query: 234 ASLGINMHF 242
S+G++ F
Sbjct: 208 LSVGVSYRF 216
>gi|332701600|ref|ZP_08421688.1| putative outer-membrane protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332551749|gb|EGJ48793.1| putative outer-membrane protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 217
Score = 68.7 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 61/194 (31%), Gaps = 12/194 (6%)
Query: 56 GNYVGLHISRLYETHPL---ADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTT 111
G Y+G + + + + + G+ LG+ ++D F G
Sbjct: 29 GFYIGAKVGNESYQIDVEYDGPSNDFEDDADDSGFVAGVYLGNGRAIKDVFYLGWEVDAM 88
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKA---GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ +F E + + LKA G D L+YG+ G A + D+
Sbjct: 89 THNMEGSFSGGNESLDMNWSLGLKARLGGVIADRNLLYGLAGVRFASFDYRNDTGYILDD 148
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ LG G ++ + + A Y + V + +
Sbjct: 149 E-----DENPVLPGFTLGGGYEFAITDHLIARAEVTYTAYAAAKVEYLGGPRNGIEEEMS 203
Query: 229 GNAHIASLGINMHF 242
+ ++G+ +F
Sbjct: 204 PSTMDYTVGLAWNF 217
>gi|237730913|ref|ZP_04561394.1| outer membrane protein A [Citrobacter sp. 30_2]
gi|226906452|gb|EEH92370.1| outer membrane protein A [Citrobacter sp. 30_2]
Length = 356
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 59/191 (30%), Gaps = 30/191 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + I+ G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQFHDIGNNRIDNNGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 92
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 93 PYKGSEQNGAFKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADAKNN 140
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G S V G++Y + +I+ Y++ +N D V + +
Sbjct: 141 DGFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTVGGRPDN 190
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 191 GLLSVGVSYRF 201
>gi|56413933|ref|YP_151008.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362856|ref|YP_002142493.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128190|gb|AAV77696.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094333|emb|CAR59845.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 350
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGP 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 STKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 186 LLSVGVSYRF 195
>gi|281178081|dbj|BAI54411.1| outer membrane protein OmpA [Escherichia coli SE15]
gi|323190770|gb|EFZ76039.1| outer membrane protein A [Escherichia coli RN587/1]
Length = 350
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 28 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 186 MLSLGVSYRF 195
>gi|300902879|ref|ZP_07120825.1| outer membrane protein A [Escherichia coli MS 84-1]
gi|301302427|ref|ZP_07208558.1| outer membrane protein A [Escherichia coli MS 124-1]
gi|300405092|gb|EFJ88630.1| outer membrane protein A [Escherichia coli MS 84-1]
gi|300842266|gb|EFK70026.1| outer membrane protein A [Escherichia coli MS 124-1]
gi|315258005|gb|EFU37973.1| outer membrane protein A [Escherichia coli MS 85-1]
Length = 358
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +++ A
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKANVPGGA 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 194 MLSLGVSYRF 203
>gi|62179592|ref|YP_216009.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62127225|gb|AAX64928.1| putative hydrogenase, membrane component [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|322714061|gb|EFZ05632.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 350
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGP 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 STKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 186 LLSVGVSYRF 195
>gi|331685335|ref|ZP_08385921.1| adhesin/virulence factor Hek [Escherichia coli H299]
gi|323939576|gb|EGB35782.1| tia protein [Escherichia coli E482]
gi|331077706|gb|EGI48918.1| adhesin/virulence factor Hek [Escherichia coli H299]
Length = 248
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 64/232 (27%), Gaps = 34/232 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL---YETHPLADTINRKTYNSLLPN------GLGIELGH 95
Q +G YV Y + G G+ +G+
Sbjct: 17 SAQALADESKTGFYVTGKAGASVVMQTDQRFRQDFGDDVYKYKGGDKNDTVFGAGLAVGY 76
Query: 96 N-IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG--------------DVVLKAGYSV 140
+ Q + + Y L G +++ Y
Sbjct: 77 DFYQHYNVPVRTEVEFYGRGAADSRYTLDTWRSPMGDGGREDTQNRLSVNTLMVNTYYDF 136
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-------GHGSSVVLGIGLD 190
+ + G G A V + S N + + +G G+
Sbjct: 137 RNSSAFTPWVSVGLGYARVHHKATYIDTSWNESGEISDISALHYSGYDNNFAWSIGAGVR 196
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y V DI+L SYRY+ S++ + + D + + +H G+ HF
Sbjct: 197 YDVTPDIALDLSYRYLDAGKSSLSYKDTEGDKYKSEADVKSHDIMFGVTYHF 248
>gi|300921002|ref|ZP_07137390.1| outer membrane protein A [Escherichia coli MS 115-1]
gi|300412048|gb|EFJ95358.1| outer membrane protein A [Escherichia coli MS 115-1]
Length = 358
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 194 LLSLGVSYRF 203
>gi|158536385|gb|ABW72717.1| outer membrane protein A [Escherichia coli]
gi|158536387|gb|ABW72718.1| outer membrane protein A [Escherichia coli]
gi|158536389|gb|ABW72719.1| outer membrane protein A [Escherichia coli]
gi|158536393|gb|ABW72721.1| outer membrane protein A [Escherichia coli]
gi|158536399|gb|ABW72724.1| outer membrane protein A [Escherichia coli]
gi|158536401|gb|ABW72725.1| outer membrane protein A [Escherichia coli]
Length = 358
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +++ A
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKANVPGGA 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 194 MLSLGVSYRF 203
>gi|126462144|ref|YP_001043258.1| putative outer membrane protein [Rhodobacter sphaeroides ATCC
17029]
gi|126103808|gb|ABN76486.1| putative outer membrane protein [Rhodobacter sphaeroides ATCC
17029]
Length = 200
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 50/190 (26%), Gaps = 34/190 (17%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSG YVG + + D G+ G+ V G
Sbjct: 45 DWSGFYVGGQLGYGKVDTNIDDL-------DGNGAIGGLHAGYRYDFGRAVVGAELAYDV 97
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D + + L AG + L+Y G A +
Sbjct: 98 TNIDLDGI-ADSELDNVTTLKLMAGGKMGKGLLYATAGGSWAD---------------AS 141
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G D + V GIG DYMVN S+ A + D + +A
Sbjct: 142 IGGADVSDNGYVYGIGYDYMVNDRWSVGAE-----------LLRHTWDDFDDSGVDVDAT 190
Query: 233 IASLGINMHF 242
+ F
Sbjct: 191 TLQAKVGFRF 200
>gi|217979538|ref|YP_002363685.1| putative outer-membrane immunogenic protein precursor [Methylocella
silvestris BL2]
gi|217504914|gb|ACK52323.1| putative outer-membrane immunogenic protein precursor [Methylocella
silvestris BL2]
Length = 200
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 50/166 (30%), Gaps = 21/166 (12%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
Y W+G Y G++I ++ + + G ++G+N
Sbjct: 33 PYPKEAPLYTPPPEFSWTGFYAGVNIGGGLSAENAFNSFSGINASRAGGVVGGGQVGYNY 92
Query: 98 QLED-FVFGINCHTTAAKDDSTFYRLK---EKYFIYGDVVLKAGYSV--DSLLIYGMGGF 151
QL FV GI + ++ +G +AG++V LL+YG GG
Sbjct: 93 QLTPLFVVGIENEFLGSSISTSNNDWNRPHVTVPFFGTARGRAGFTVFDPHLLVYGTGGL 152
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
V D + G G + +
Sbjct: 153 AFGQVND---------------AGINKLRIGWTAGSGFGMGFSAQL 183
>gi|168243859|ref|ZP_02668791.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|198244081|ref|YP_002215003.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197938597|gb|ACH75930.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205337186|gb|EDZ23950.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|312912061|dbj|BAJ36035.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|323129338|gb|ADX16768.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326627270|gb|EGE33613.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 369
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 47 WYAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 101
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+
Sbjct: 102 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGP 154
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 155 STKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 204
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 205 LLSVGVSYRF 214
>gi|157146352|ref|YP_001453671.1| outer membrane protein A [Citrobacter koseri ATCC BAA-895]
gi|157083557|gb|ABV13235.1| hypothetical protein CKO_02111 [Citrobacter koseri ATCC BAA-895]
Length = 356
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 58/191 (30%), Gaps = 30/191 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + I+ G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQFHDVGNNQIDNNGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 92
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
K + K GY + D L +Y GG +D N
Sbjct: 93 PYKGNTQNGAFKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADAQNN 140
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G S V G++Y V DI+ Y++ +N D V + +
Sbjct: 141 TGFKDHDTGVSPVFAGGVEYAVTRDIATRLEYQW----------TNNIGDANTVGGRPDN 190
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 191 GLLSVGVSYRF 201
>gi|126735685|ref|ZP_01751430.1| possible outer membrane protein [Roseobacter sp. CCS2]
gi|126714872|gb|EBA11738.1| possible outer membrane protein [Roseobacter sp. CCS2]
Length = 205
Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 40/179 (22%), Gaps = 24/179 (13%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G Y G + + G G+ +V G
Sbjct: 51 DWTGFYAGAQLGYGVVEAD-------ALSDDGEDLTYGAHAGYLYDFGSWVLGGELDLDG 103
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + L+ GY L Y GG D A
Sbjct: 104 TEISQDGIDV----DTVTRAKLRLGYDAGDFLPYITGGVAQLRTSSDDDTFDGDDTGGFA 159
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+GL+Y V+ I + ++ + + +
Sbjct: 160 -------------GLGLEYRVSPTIRVGGEVLQHQFEDYNGSGEDIDARTIAARVSFQF 205
>gi|91210052|ref|YP_540038.1| outer membrane protein A [Escherichia coli UTI89]
gi|237707059|ref|ZP_04537540.1| outer membrane protein A [Escherichia sp. 3_2_53FAA]
gi|91071626|gb|ABE06507.1| outer membrane protein A precursor [Escherichia coli UTI89]
gi|226898269|gb|EEH84528.1| outer membrane protein A [Escherichia sp. 3_2_53FAA]
Length = 375
Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 57 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 111
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 112 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 159
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 160 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 209
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 210 GMLSLGVSYRF 220
>gi|170680671|ref|YP_001746676.1| heat resistant agglutinin 1 [Escherichia coli SMS-3-5]
gi|218698021|ref|YP_002405688.1| exported surface protein precursor [Escherichia coli 55989]
gi|170518389|gb|ACB16567.1| heat resistant agglutinin 1 [Escherichia coli SMS-3-5]
gi|218354753|emb|CAV01825.1| exported surface protein precursor [Escherichia coli 55989]
gi|324019247|gb|EGB88466.1| OmpA-like transmembrane domain protein [Escherichia coli MS 117-3]
Length = 263
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 69/231 (29%), Gaps = 34/231 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELG 94
Q +G YV + + +G GI G
Sbjct: 34 STQALADESKTGFYVTGKAGASVMSLADQRFLSGDGEETSKYKGGDGHDTVFSG-GIAAG 92
Query: 95 HNI--QLE-------DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSV 140
++ Q +F + D ++ + + ++L A Y
Sbjct: 93 YDFYPQFSIPVRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDF 152
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDY 191
+ + G G A + + D + GR S LG G+ Y
Sbjct: 153 RNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSLGAGVRY 212
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V DI+L SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 213 DVTPDIALDLSYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDILLGVTYNF 263
>gi|293409335|ref|ZP_06652911.1| outer membrane protein A [Escherichia coli B354]
gi|291469803|gb|EFF12287.1| outer membrane protein A [Escherichia coli B354]
Length = 350
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 28 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 186 MLSLGVSYRF 195
>gi|330908612|gb|EGH37131.1| peptide transport periplasmic protein sapA [Escherichia coli AA86]
Length = 248
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 67/232 (28%), Gaps = 34/232 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISR---LYETHPLADTINRKTYNSLLPN------GLGIELGH 95
Q +G YV + Y + G G+ +G+
Sbjct: 17 SAQALADENKTGFYVTGKAGASVVAQTDQRFRQDLGEDVYKYKGGDKNDTVFGAGLAVGY 76
Query: 96 N-IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG--------------DVVLKAGYSV 140
+ Q + + Y L + G +++ Y
Sbjct: 77 DFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGNGGREDTQNRLSVNTLMVNTYYDF 136
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-------GHGSSVVLGIGLD 190
+ + G G A V + S N + + +G G+
Sbjct: 137 RNSSAFTPWVSVGLGYARVHHKATYTDTSWNESGEISDISELHYSGYDNNFAWSIGAGVR 196
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y V DI+L SYRY+ S++ +A+ D + + +H G+ +F
Sbjct: 197 YDVTPDIALDLSYRYLDAGKSSLSYKDAEEDKYKSEVDVKSHDIMFGVTYNF 248
>gi|46397579|gb|AAS91718.1| OmpA [Bibersteinia trehalosi]
gi|46397584|gb|AAS91722.1| OmpA [Bibersteinia trehalosi]
gi|46397589|gb|AAS91726.1| OmpA [Bibersteinia trehalosi]
gi|46397594|gb|AAS91730.1| OmpA [Bibersteinia trehalosi]
Length = 360
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 20/197 (10%)
Query: 58 YVGLHISRLYETHPLA--DTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAAK 114
YVG ++ D N Y + G +G+ I +++
Sbjct: 28 YVGAKAGWASFHDGISQIDHKNGGKYGINKNSVTYGAFVGYQI-IDN--LAAEVGYEYFG 84
Query: 115 -------DDSTFYRLKEKYFIYGDVVLKAG-YSVDSLL-IYGMGGFGGAYVIDSSLEKVE 165
+ + ++ +G + G Y V S L Y G ++
Sbjct: 85 RVRGLEQTKAGGSKKTFRHSAHGTTIALKGNYEVISGLDTYAKAGIALVNNSYKTVNVDT 144
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+K ++ SS++LG G++Y + + Y+++ + + + + VE
Sbjct: 145 KVPTKTSRF-----QSSLILGAGVEYAITPSLGARIEYQWLNNAGKASYATLRRMGVEGS 199
Query: 226 DRKGNAHIASLGINMHF 242
D + + S G+ F
Sbjct: 200 DYRPDISSVSAGLTYRF 216
>gi|261491959|ref|ZP_05988536.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|45758053|gb|AAO85785.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
gi|261312426|gb|EEY13552.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 374
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 61/217 (28%), Gaps = 43/217 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G L N Y G GI LG N +G+ +
Sbjct: 26 FYAGAKAGWASFHDGLTQFDNTYDY------GSGINLGIN--RNSVTYGVFGGYQILNQN 77
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVD--------------------------SLLIYGMGG 150
+ + Y +G V +S D +L +YG G
Sbjct: 78 NFGLATELGYDYFGRVRGNTTFSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVG 137
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--- 207
V+ K+++ + S++LG GL+Y + +++ Y+Y+
Sbjct: 138 VALVRNDY----YVQQHVDKDSRIKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVG 193
Query: 208 --HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ H S G++ F
Sbjct: 194 NLDKAVRTTVGYLIPRGTNFQYSPDIHSVSAGLSYRF 230
>gi|332558148|ref|ZP_08412470.1| outer membrane protein [Rhodobacter sphaeroides WS8N]
gi|332275860|gb|EGJ21175.1| outer membrane protein [Rhodobacter sphaeroides WS8N]
Length = 200
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 50/190 (26%), Gaps = 34/190 (17%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSG YVG + + D G+ G+ V G
Sbjct: 45 DWSGFYVGGQLGYGKVDTNIDDL-------DGNGAIGGLHAGYRYDFGRAVVGAELAYDV 97
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D + + L AG + L+Y G A +
Sbjct: 98 TNIDLDGI-ADSEVDNVTTLKLMAGGKMGKGLLYATAGGSWAD---------------AS 141
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G D + V GIG DYMVN S+ A + D + +A
Sbjct: 142 IGGADVSDNGYVYGIGYDYMVNDRWSVGAE-----------LLRHTWDDFDDSGVDVDAT 190
Query: 233 IASLGINMHF 242
+ F
Sbjct: 191 TLQAKVGFRF 200
>gi|300824154|ref|ZP_07104273.1| outer membrane protein A [Escherichia coli MS 119-7]
gi|300925361|ref|ZP_07141248.1| outer membrane protein A [Escherichia coli MS 182-1]
gi|301327213|ref|ZP_07220475.1| outer membrane protein A [Escherichia coli MS 78-1]
gi|309795053|ref|ZP_07689473.1| outer membrane protein A [Escherichia coli MS 145-7]
gi|300418528|gb|EFK01839.1| outer membrane protein A [Escherichia coli MS 182-1]
gi|300523330|gb|EFK44399.1| outer membrane protein A [Escherichia coli MS 119-7]
gi|300846194|gb|EFK73954.1| outer membrane protein A [Escherichia coli MS 78-1]
gi|308121357|gb|EFO58619.1| outer membrane protein A [Escherichia coli MS 145-7]
Length = 358
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +++ A
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKANVPGGA 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 194 LLSLGVSYRF 203
>gi|299134642|ref|ZP_07027834.1| conserved hypothetical protein [Afipia sp. 1NLS2]
gi|298590452|gb|EFI50655.1| conserved hypothetical protein [Afipia sp. 1NLS2]
Length = 486
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 55/212 (25%), Gaps = 29/212 (13%)
Query: 51 YGIWSGNYVGLHISRL-YETHPLADTINRKTYNSLLPNGLGIEL----GHNIQLED-FVF 104
W+G YV + + T T G G G++ QL +V
Sbjct: 36 VSNWTGFYVTGGFGYGLMSSDQHSTTGGAATSVDTRTGGRGYFGTVGLGYDYQLTPAWVV 95
Query: 105 GINCHTTAAKDDST-------FYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYV 156
G+ + K + GY V ++L Y G+
Sbjct: 96 GVFGDAQWGDIRGDLIDITTPGISGRLKNDAAYSAGARLGYLVAPNVLSYVNAGYSYGQF 155
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYRYIPHHI 210
S+ H +G G++ +N + YR +
Sbjct: 156 KGSTFSD-------GVTAIDKSHRDGWFIGGGVENDLNFFGIKAPGWFMKTEYRVTEYDR 208
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + + K S + F
Sbjct: 209 KNSLYNDGSGN--GIAFKPYVQTVSTSLVYRF 238
Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/220 (12%), Positives = 54/220 (24%), Gaps = 30/220 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG------IELGHNIQLED-F 102
W+G Y+ + N L G + G++ Q+ +
Sbjct: 260 AAYNWTGFYLAGGGGYGLMSSDQHTVDLATGANGLDTRAGGRGYFGTVGGGYDWQINPTW 319
Query: 103 VFGINCHTTAAKDDSTFYR-----------LKEKYFIYGDVVLKAGYSV-DSLLIYGMGG 150
V G+ + + K + GY + + L Y G
Sbjct: 320 VVGVFGDAQFGDIRGSLADATGGGLGAGVTGRLKNDTNYAAGARLGYLISPNALSYVNVG 379
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYR 204
+ A +L H LG G++ +N + YR
Sbjct: 380 YSHADFKGVALTNATG---AAVGSTGKSHRDGWFLGGGVENSLNIFGISSPGWFMKTEYR 436
Query: 205 YIPHHIHS--VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + V + + + K + F
Sbjct: 437 VAEYDRKTSQVFDPAGVATTTGIAFKPYVQTIQTSLVYRF 476
>gi|170769190|ref|ZP_02903643.1| outer membrane protein A [Escherichia albertii TW07627]
gi|170121842|gb|EDS90773.1| outer membrane protein A [Escherichia albertii TW07627]
Length = 358
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + I+ G G G+ Q+ +V G
Sbjct: 36 WYTGAKLG--WSQFHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +++ A
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKANVPGGA 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 194 LLSLGVSYRF 203
>gi|323967204|gb|EGB62628.1| OmpA transmembrane domain-containing protein [Escherichia coli
M863]
gi|323976664|gb|EGB71752.1| OmpA transmembrane domain-containing protein [Escherichia coli
TW10509]
gi|327253749|gb|EGE65378.1| outer membrane protein A [Escherichia coli STEC_7v]
Length = 350
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 62/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 186 LLSLGVSYRF 195
>gi|307552789|gb|ADN45564.1| outer membrane protein A [Escherichia coli ABU 83972]
Length = 350
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 28 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 186 MLSLGVSYRF 195
>gi|194450606|ref|YP_002045072.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197265555|ref|ZP_03165629.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|194408910|gb|ACF69129.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197243810|gb|EDY26430.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|321223685|gb|EFX48748.1| Outer membrane protein A precursor [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|326622756|gb|EGE29101.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 358
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 36 WYAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGP 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 STKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 194 LLSVGVSYRF 203
>gi|158536391|gb|ABW72720.1| outer membrane protein A [Escherichia coli]
gi|158536395|gb|ABW72722.1| outer membrane protein A [Escherichia coli]
gi|158536397|gb|ABW72723.1| outer membrane protein A [Escherichia coli]
Length = 358
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +++ A
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKANVPGGA 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 194 LLSLGVSYRF 203
>gi|260597356|ref|YP_003209927.1| outer membrane protein A [Cronobacter turicensis z3032]
gi|260216533|emb|CBA29736.1| Outer membrane protein A [Cronobacter turicensis z3032]
Length = 355
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 60/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + T G G G+ Q+ +V G
Sbjct: 36 WYAGGKLGWSQFHDTGFIPNDGPT--HESQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
K + K GY V D L +Y GG +D+S N
Sbjct: 91 PYKGDTVNGAFKAQGV-QLTAKLGYPVTDDLDVYTRLGGMVWR-----------ADSSSN 138
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G G S V G+++ + DI+ Y+++ N D + V + +
Sbjct: 139 IGGDDHDTGVSPVFAGGVEWAMTRDIATRLEYQWV----------NNIGDAQTVGARPDN 188
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 189 GMLSVGVSYRF 199
>gi|281600319|gb|ADA73303.1| Outer membrane protein A [Shigella flexneri 2002017]
Length = 356
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 36 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 91 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 144 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 193
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 194 LLSLGVSYRF 203
>gi|156934557|ref|YP_001438473.1| outer membrane protein A [Cronobacter sakazakii ATCC BAA-894]
gi|156532811|gb|ABU77637.1| hypothetical protein ESA_02391 [Cronobacter sakazakii ATCC BAA-894]
Length = 358
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 60/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + T G G G+ Q+ +V G
Sbjct: 39 WYAGGKLGWSQFHDTGFIPNDGPT--HESQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 93
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
K + K GY V D L +Y GG +D+S N
Sbjct: 94 PYKGDTVNGAFKAQGV-QLTAKLGYPVTDDLDVYTRLGGMVWR-----------ADSSSN 141
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G G S V G+++ + DI+ Y+++ N D + V + +
Sbjct: 142 IGGDDHDTGVSPVFAGGVEWAMTRDIATRLEYQWV----------NNIGDAQTVGARPDN 191
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 192 GMLSVGVSYRF 202
>gi|84499800|ref|ZP_00998088.1| outer membrane protein, putative [Oceanicola batsensis HTCC2597]
gi|84392944|gb|EAQ05155.1| outer membrane protein, putative [Oceanicola batsensis HTCC2597]
Length = 194
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 54/211 (25%), Gaps = 44/211 (20%)
Query: 33 KIDLFNEADNNVEY-QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGI 91
E WSG Y G + A R G
Sbjct: 27 PTQAQPEPVVAQPVTPVVAGTDWSGPYYGASLGFGSWDLGGASGEGRNE---------GA 77
Query: 92 ELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
LG++ ++V G L + K GY +L+YG G+
Sbjct: 78 FLGYDYDFGNYVAGGELQYIGNDVTVGGTALNG----MARLKGKLGYDAGPVLLYGTAGY 133
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
A G G V G+G+DY + +++ A Y Y
Sbjct: 134 AWAD-------------------SSAGDGDGYVAGVGMDYQFDNGVAVGAEYLY------ 168
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N SD + I+ F
Sbjct: 169 -----NEFSDFANTGNTLTGNTIEARISYRF 194
>gi|218548466|ref|YP_002382257.1| outer membrane protein A [Escherichia fergusonii ATCC 35469]
gi|218356007|emb|CAQ88623.1| outer membrane protein A (3a;II*;G;d) [Escherichia fergusonii ATCC
35469]
Length = 375
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 25/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 52 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 106
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K + K GY + D L IY G + V ++ KN
Sbjct: 107 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESEKN- 164
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G S V G+++ + +I+ Y++ +N D + + +
Sbjct: 165 ----HDTGVSPVFAGGVEWAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 210
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 211 LLSLGVSYRF 220
>gi|117623167|ref|YP_852080.1| outer membrane protein A [Escherichia coli APEC O1]
gi|115512291|gb|ABJ00366.1| OmpA [Escherichia coli APEC O1]
Length = 370
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 52 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 106
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 107 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 154
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 155 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 204
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 205 GMLSLGVSYRF 215
>gi|331641486|ref|ZP_08342621.1| outer membrane protein A [Escherichia coli H736]
gi|331038284|gb|EGI10504.1| outer membrane protein A [Escherichia coli H736]
Length = 370
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 52 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 106
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L IY GG +D N
Sbjct: 107 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSN 154
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 155 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 204
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 205 GMLSLGVSYRF 215
>gi|293414237|ref|ZP_06656886.1| OOP family OmpA-OmpF porin [Escherichia coli B185]
gi|291434295|gb|EFF07268.1| OOP family OmpA-OmpF porin [Escherichia coli B185]
Length = 350
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 28 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 186 LLSLGVSYRF 195
>gi|332342400|gb|AEE55734.1| outer membrane protein OmpA [Escherichia coli UMNK88]
Length = 350
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 28 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +++ A
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKANVPGGA 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 186 MLSLGVSYRF 195
>gi|332187217|ref|ZP_08388956.1| hypothetical protein SUS17_2335 [Sphingomonas sp. S17]
gi|332012638|gb|EGI54704.1| hypothetical protein SUS17_2335 [Sphingomonas sp. S17]
Length = 200
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 60/196 (30%), Gaps = 31/196 (15%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G V I + K +S G +G++I + G T +
Sbjct: 28 TGFRVEGLIGY-----DSLNDRQGKDNSSSDGVLYGAGIGYDIPAGPVILGAEGEITGSS 82
Query: 115 DDSTFYRLKEKYFIY--GDVV-----LKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVES 166
D+ + + G + GY + L Y G+ A +
Sbjct: 83 SDTRSNNVTVPGDQFRLGAGRDLYAGARVGYMISPVALGYVKAGYTNAKFDARYTNAGVT 142
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ + G LG GL+Y ++ + + YRY + +++ V
Sbjct: 143 NVNSQEVG-------GYRLGAGLEYAISPNTFVKGEYRYSHYD-----------ELDGVG 184
Query: 227 RKGNAHIASLGINMHF 242
N H G+ + F
Sbjct: 185 INPNRHQLLAGLGLRF 200
>gi|300819200|ref|ZP_07099401.1| outer membrane protein A [Escherichia coli MS 107-1]
gi|300528219|gb|EFK49281.1| outer membrane protein A [Escherichia coli MS 107-1]
Length = 353
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 35 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 89
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L IY GG +D N
Sbjct: 90 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSN 137
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 138 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 187
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 188 GMLSLGVSYRF 198
>gi|331651979|ref|ZP_08352998.1| outer membrane protein A (Outer membrane protein II) [Escherichia
coli M718]
gi|331050257|gb|EGI22315.1| outer membrane protein A (Outer membrane protein II) [Escherichia
coli M718]
Length = 375
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 52 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 106
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K + K GY + D L +Y G + V ++ KN
Sbjct: 107 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWRADTKAHNNVTGESEKN- 164
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G S V G+++ + +I+ Y++ +N D + + +
Sbjct: 165 ----HDTGVSPVFAGGVEWAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 210
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 211 LLSLGVSYRF 220
>gi|307627623|gb|ADN71927.1| outer membrane protein A [Escherichia coli UM146]
Length = 365
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 47 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 101
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 102 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 149
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 150 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 199
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 200 GMLSLGVSYRF 210
>gi|46397588|gb|AAS91725.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG H + ++ + +G + I +G+
Sbjct: 27 FYVGAKAGWATFHHGVNQFNSKYANDERYSDGPTA---YGINRNSVTYGVFGGYQIID-- 81
Query: 117 STFYRLKEKYFIYGDVVLKAG-------------------YSVDSLL-IYGMGGFGGAYV 156
++ Y +G V G Y V S L +YG G
Sbjct: 82 --NLAVELGYDYFGRVRGNVGDRRAFKDTKHGAHISLKPSYEVVSGLDLYGKVGAALVRN 139
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + +S++LG G++Y + +++ Y+++ +
Sbjct: 140 DYKDYYANGTKDKSHNL------KTSLILGAGVEYAITPALAVRLEYQWLSRAGNYGKAE 193
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+V + +AH S G+ F
Sbjct: 194 AKAGNVTDLRYSPDAHSVSAGLTYRF 219
>gi|315179386|gb|ADT86300.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
Length = 332
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + L D N L G LG+N D+ + +
Sbjct: 24 YVGAKVGKTW----LDDACNNTESCDLDGTTAGALLGYN--FNDW-LALEGGYDYLGKFN 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
++ Y + K Y++ + +YG G
Sbjct: 77 GAGLDRDTIQAY-TLAPKLSYALTEQWDLYGKVGAARVRYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
D S + G++Y ++ + Y+Y+ SD+ + AH +L
Sbjct: 117 DASDYSYLGAAGVEYAATRNLGVRVEYQYL-------------SDMNNDVVRAKAHTTTL 163
Query: 237 GINMHF 242
G+ F
Sbjct: 164 GLVYRF 169
>gi|311280141|ref|YP_003942372.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308749336|gb|ADO49088.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 362
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 57/192 (29%), Gaps = 30/192 (15%)
Query: 57 NYVGLHISRLYETHPLA--DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + D +N G G G+ Q+ +V G
Sbjct: 39 WYAGGKLGWSQFHDTGWYNDDLNNNGPTHNSQLGAGAFGGY--QVNPYV-GFEMGYDWLG 95
Query: 115 ---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
K + K GY + D L IY G S+
Sbjct: 96 RMPYKGDKVNGAFKAQGV-QLTAKLGYPITDDLDIYTRLGGMIWRADSSNSIA------- 147
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G G S ++ G+++ + DI+ Y+++ N D V + +
Sbjct: 148 ---GDNHDTGVSPLVAGGVEWAITRDIATRLEYQWV----------NNIGDAGTVGVRPD 194
Query: 231 AHIASLGINMHF 242
+ SLG++ F
Sbjct: 195 NGMLSLGVSYRF 206
>gi|170020642|ref|YP_001725596.1| outer membrane protein A [Escherichia coli ATCC 8739]
gi|256023341|ref|ZP_05437206.1| outer membrane protein A [Escherichia sp. 4_1_40B]
gi|307137587|ref|ZP_07496943.1| outer membrane protein A [Escherichia coli H736]
gi|169755570|gb|ACA78269.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli ATCC 8739]
gi|320637825|gb|EFX07617.1| outer membrane protein A [Escherichia coli O157:H7 str. G5101]
gi|320642950|gb|EFX12151.1| outer membrane protein A [Escherichia coli O157:H- str. 493-89]
gi|320653723|gb|EFX21797.1| outer membrane protein A [Escherichia coli O55:H7 str. 3256-97 TW
07815]
Length = 365
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 47 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 101
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L IY GG +D N
Sbjct: 102 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSN 149
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 150 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 199
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 200 GMLSLGVSYRF 210
>gi|91213830|ref|YP_543816.1| adhesin/virulence factor Hek [Escherichia coli UTI89]
gi|14993800|gb|AAK73174.1| adhesin/virulence factor Hek [Escherichia coli]
gi|91075404|gb|ABE10285.1| adhesin/virulence factor Hek [Escherichia coli UTI89]
gi|307629349|gb|ADN73653.1| OmpA family protein [Escherichia coli UM146]
Length = 251
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 69/221 (31%), Gaps = 34/221 (15%)
Query: 55 SGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHNI--QLE-- 100
SG Y+ + + +G GI +G++ Q
Sbjct: 32 SGFYLTGKAGASVMSLSDQRFLSGDEEETSKYKGGDDHDTVFSG-GIAVGYDFYPQFSIP 90
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSVDS---LLIYG 147
+F + D ++ + + ++L A Y + +
Sbjct: 91 VRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWV 150
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSA 201
G G A + + D + GR S LG G+ Y V DI+L
Sbjct: 151 SAGIGYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDL 210
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 211 SYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 251
>gi|301049231|ref|ZP_07196205.1| OmpA-like transmembrane domain protein [Escherichia coli MS 185-1]
gi|300298964|gb|EFJ55349.1| OmpA-like transmembrane domain protein [Escherichia coli MS 185-1]
Length = 251
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 34/221 (15%)
Query: 55 SGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHNI--QLE-- 100
SG Y+ + + +G GI G++ Q
Sbjct: 32 SGFYLTGKAGTSVVSLSDQHFLSGDEEETSKYKGGDDHDTVFSG-GIAAGYDFYPQFSIP 90
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSVDS---LLIYG 147
+F + D ++ + + ++L A Y + +
Sbjct: 91 VRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWI 150
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSA 201
G G A + + D + GR S LG G+ Y V DI+L
Sbjct: 151 SAGIGYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDL 210
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 211 SYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 251
>gi|300722575|ref|YP_003711865.1| outer membrane protein 3a [Xenorhabdus nematophila ATCC 19061]
gi|218157851|gb|ACK58677.1| OpnT [Xenorhabdus nematophila]
gi|297629082|emb|CBJ89667.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus nematophila ATCC
19061]
Length = 369
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 59/195 (30%), Gaps = 23/195 (11%)
Query: 57 NYVGLHISRLYET-----HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
Y G + DT G G +G+ Q + G
Sbjct: 26 WYTGGKLGWSQYHDVNFYGNGYDTRIGNGSTHKSQLGAGAYVGY--QANPY-LGFELGYD 82
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + + K Y +D+L +Y G S+ +
Sbjct: 83 WLGRMAYKGSINNGAFRAQGV-QLTTKLSYPVMDNLDVYTRLGGMVWRTDSSATYNANAA 141
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ + + G S + IG++Y + +++ Y+++ N D V
Sbjct: 142 SPTQLRKKDHDTGVSPLAAIGVEYALAKNLATRIDYQWV----------NNIGDATTVGA 191
Query: 228 KGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 192 RPDNGMLSVGVSYRF 206
>gi|284920801|emb|CBG33864.1| outer membrane protein A [Escherichia coli 042]
Length = 350
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGV 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 STKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 186 MLSLGVSYRF 195
>gi|300903858|ref|ZP_07121762.1| OmpA-like transmembrane domain protein [Escherichia coli MS 84-1]
gi|300404154|gb|EFJ87692.1| OmpA-like transmembrane domain protein [Escherichia coli MS 84-1]
gi|315256867|gb|EFU36835.1| OmpA-like transmembrane domain protein [Escherichia coli MS 85-1]
Length = 251
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 34/221 (15%)
Query: 55 SGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHNI--QLE-- 100
SG Y+ + + +G GI G++ Q
Sbjct: 32 SGFYLTGKAGASVVSLSDQRFLSGDEEETSKYKGGDDHDTVFSG-GIAAGYDFYPQFSIP 90
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSVDS---LLIYG 147
+F + D ++ + + ++L A Y + +
Sbjct: 91 VRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWV 150
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSA 201
G G A + + D + GR S LG G+ Y V DI+L
Sbjct: 151 SAGIGYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDL 210
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 211 SYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 251
>gi|157159269|ref|YP_001462189.1| outer membrane protein A [Escherichia coli E24377A]
gi|331667340|ref|ZP_08368205.1| outer membrane protein A [Escherichia coli TA271]
gi|51235576|gb|AAT98589.1| outer membrane protein A [Escherichia coli]
gi|157081299|gb|ABV21007.1| outer membrane protein A [Escherichia coli E24377A]
gi|331065696|gb|EGI37589.1| outer membrane protein A [Escherichia coli TA271]
Length = 350
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 28 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +++ A
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKANVPGGA 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 186 LLSLGVSYRF 195
>gi|227886672|ref|ZP_04004477.1| heat resistant agglutinin 1 [Escherichia coli 83972]
gi|23954223|emb|CAD42020.1| adhesin/virulence factor Hek [Escherichia coli]
gi|227836245|gb|EEJ46711.1| heat resistant agglutinin 1 [Escherichia coli 83972]
gi|315293642|gb|EFU52994.1| OmpA-like transmembrane domain protein [Escherichia coli MS 153-1]
gi|324014420|gb|EGB83639.1| OmpA-like transmembrane domain protein [Escherichia coli MS 60-1]
Length = 251
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 34/221 (15%)
Query: 55 SGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHNI--QLE-- 100
SG Y+ + + +G GI G++ Q
Sbjct: 32 SGFYLTGKAGASVVSLSDQRFLSGDEEETSKYKGGDDHDTVFSG-GIAAGYDFYPQFSIP 90
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSVDS---LLIYG 147
+F + D ++ + + ++L A Y + +
Sbjct: 91 VRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWV 150
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSA 201
G G A + + D + GR S LG G+ Y V DI+L
Sbjct: 151 SAGIGYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDL 210
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 211 SYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 251
>gi|260767782|ref|ZP_05876717.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
gi|260617291|gb|EEX42475.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
Length = 332
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + L D N L G LG+N D+ + +
Sbjct: 24 YVGAKVGKTW----LDDACNNTESCDLDGTTAGALLGYN--FNDW-LALEGGYDYLGKFN 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
++ Y + K Y++ + +YG G
Sbjct: 77 GAGLDRDTIQAY-TLAPKLSYALTEQWDLYGKVGAARVRYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
D S + G++Y ++ + Y+Y+ SD+ + AH +L
Sbjct: 117 DASDYSYLGAAGVEYAATRNLGVRVEYQYL-------------SDMNNDVVRAKAHTTTL 163
Query: 237 GINMHF 242
G+ F
Sbjct: 164 GLVYRF 169
>gi|16764429|ref|NP_460044.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|205352225|ref|YP_002226026.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856415|ref|YP_002243066.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|20141670|sp|P02936|OMPA_SALTY RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane major heat-modifiable protein; AltName:
Full=Outer membrane protein 33K; Flags: Precursor
gi|16419585|gb|AAL20003.1| putative membrane component hydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|146760785|gb|ABQ44512.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|205272006|emb|CAR36850.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708218|emb|CAR32518.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261246287|emb|CBG24095.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992822|gb|ACY87707.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157614|emb|CBW17106.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|332987964|gb|AEF06947.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 350
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 28 WYAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L +Y GG +S+
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGP 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 STKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 186 LLSVGVSYRF 195
>gi|209966189|ref|YP_002299104.1| outer membrane protein, putative [Rhodospirillum centenum SW]
gi|209959655|gb|ACJ00292.1| outer membrane protein, putative [Rhodospirillum centenum SW]
Length = 219
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/200 (12%), Positives = 52/200 (26%), Gaps = 25/200 (12%)
Query: 56 GNYVGLHISRLYETHPLADTINR---KTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-- 110
G Y+G + T+ S G G+ + L G+
Sbjct: 32 GPYIGAFFAYADLDVDARATVGSVTTTGDGSGDGWTFGAYAGYGMSLGPVYAGLEAEYGL 91
Query: 111 TAAKDDSTFYRLKEKYFIYGD--VVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ ++ + V + G +D +L+YG G +
Sbjct: 92 NGSSIGVRAGNIRTSFDAQDSYGVSARLGTVVMDRILVYGRFGRQWTQFDVK-------N 144
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVN-----YDISLSASYRYIPHHIHSVNNSNAKSDV 222
D G G++Y + ++ + Y Y + + A +
Sbjct: 145 TLGTVAIGSDDRLDGWRYGGGVEYALAGPGKGDNMLVRLEYSYFDYDDLATTAQLASTAA 204
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ + +G F
Sbjct: 205 Q-----VDESQIRVGFAYRF 219
>gi|209550770|ref|YP_002282687.1| hypothetical protein Rleg2_3194 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536526|gb|ACI56461.1| surface antigen msp4 family protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 278
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 76/262 (29%), Gaps = 39/262 (14%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+F ++++ ++ + DL I + +G Y+ + +
Sbjct: 5 LSGIFAALLIATNAYSADLAPAEPIPEQP--------PEVTVSEATGWYLRGDVGYAFTD 56
Query: 70 HPLADTINRKTYNSLLPNGLGI------ELGHNIQLEDFV-------FGINCHTTAAKDD 116
A N + + + G Q+ ++ + +
Sbjct: 57 LRGARYFQGSNSNEVDFDSADLDDAWTVGGGVGYQINSYLRTDLTFDYLTQADFKGSTVG 116
Query: 117 STFYRLK----------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL----- 161
+ L Y + + + G + + Y G GG+YV +L
Sbjct: 117 QCGFPLVDCTSSDRSSLTAYTLLANAYVDLG-TYGYVTPYVGAGIGGSYVKWKNLRNVAC 175
Query: 162 -EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + + G + L G V ++ YRY+ ++ A++
Sbjct: 176 ADDGSFCDDQVTHGGKGNWRFTYALMAGASIDVTCNVKADVGYRYLHIDGGNM-FGYAEN 234
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D+ + H A +G F
Sbjct: 235 GGPGRDKGLSVHEARVGARYLF 256
>gi|324113719|gb|EGC07694.1| OmpA transmembrane domain-containing protein [Escherichia
fergusonii B253]
gi|325496887|gb|EGC94746.1| outer membrane protein A [Escherichia fergusonii ECD227]
Length = 359
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 25/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 36 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K + K GY + D L IY G + V ++ KN
Sbjct: 91 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESEKN- 148
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G S V G+++ + +I+ Y++ +N D + + +
Sbjct: 149 ----HDTGVSPVFAGGVEWAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 194
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 195 LLSLGVSYRF 204
>gi|110804972|ref|YP_688492.1| outer membrane protein A [Shigella flexneri 5 str. 8401]
gi|110614520|gb|ABF03187.1| outer membrane protein 3a [Shigella flexneri 5 str. 8401]
Length = 348
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 28 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 186 LLSLGVSYRF 195
>gi|30062494|ref|NP_836665.1| outer membrane protein A [Shigella flexneri 2a str. 2457T]
gi|56479781|ref|NP_706879.2| outer membrane protein A [Shigella flexneri 2a str. 301]
gi|82544719|ref|YP_408666.1| outer membrane protein A [Shigella boydii Sb227]
gi|30040740|gb|AAP16471.1| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str.
2457T]
gi|56383332|gb|AAN42586.2| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str. 301]
gi|81246130|gb|ABB66838.1| outer membrane protein 3a [Shigella boydii Sb227]
gi|313650796|gb|EFS15197.1| outer membrane protein A [Shigella flexneri 2a str. 2457T]
gi|332759051|gb|EGJ89361.1| outer membrane protein A [Shigella flexneri 4343-70]
gi|332759932|gb|EGJ90233.1| outer membrane protein A [Shigella flexneri 2747-71]
gi|332762738|gb|EGJ93001.1| outer membrane protein A [Shigella flexneri K-671]
gi|332767750|gb|EGJ97941.1| outer membrane protein 3a [Shigella flexneri 2930-71]
gi|333001202|gb|EGK20770.1| outer membrane protein A [Shigella flexneri VA-6]
gi|333006193|gb|EGK25702.1| outer membrane protein A [Shigella flexneri K-218]
gi|333008941|gb|EGK28401.1| outer membrane protein A [Shigella flexneri K-272]
gi|333020097|gb|EGK39368.1| outer membrane protein A [Shigella flexneri K-304]
gi|333020253|gb|EGK39523.1| outer membrane protein A [Shigella flexneri K-227]
Length = 348
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 28 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 186 LLSLGVSYRF 195
>gi|46397578|gb|AAS91717.1| OmpA [Bibersteinia trehalosi]
gi|46397583|gb|AAS91721.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 61/206 (29%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG H + ++ + +G + I +G+
Sbjct: 27 FYVGAKAGWATFHHGVNQFNSKYANDERYSDGPTA---YGINRNSVTYGVFGGYQIID-- 81
Query: 117 STFYRLKEKYFIYGDVVLKAG-------------------YSVDSLL-IYGMGGFGGAYV 156
++ Y +G V G Y V S L +YG G
Sbjct: 82 --NLAVELGYDYFGRVRGNVGDRRAFKDTKHGAHISLKPSYEVVSGLDLYGKVGAALVRN 139
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + +S++LG G++Y + ++ Y+++ +
Sbjct: 140 DYKDYYANGTKDKSHNL------KTSLILGAGVEYAITPALAARLEYQWLSRAGNYGKAE 193
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+V + +AH S G+ F
Sbjct: 194 AKAGNVTDLRYSPDAHSVSAGLTYRF 219
>gi|283484404|gb|ADB23432.1| OmpA [Cronobacter sakazakii]
Length = 347
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 60/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + T G G G+ Q+ +V G
Sbjct: 28 WYAGGKLGWSQFHDTGFIPNDGPT--HESQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
K + K GY V D L +Y GG +D+S N
Sbjct: 83 PYKGDTVNGAFKAQGV-QLTAKLGYPVTDDLDVYTRLGGMVWR-----------ADSSSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G G S V G+++ + DI+ Y+++ N D + V + +
Sbjct: 131 IGGDDHDTGVSPVFAGGVEWAMTRDIATRLEYQWV----------NNIGDAQTVGARPDN 180
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 181 GMLSVGVSYRF 191
>gi|213161917|ref|ZP_03347627.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213425902|ref|ZP_03358652.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213622699|ref|ZP_03375482.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|289826790|ref|ZP_06545725.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
Length = 369
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 28/191 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 47 WYAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 101
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
K + K GY + D L +Y GG +S+
Sbjct: 102 PYKGDNTNGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGG 153
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 154 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDN 203
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 204 GLLSVGVSYRF 214
>gi|315287600|gb|EFU47006.1| outer membrane protein A [Escherichia coli MS 110-3]
Length = 354
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 36 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 91 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 138
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 139 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 188
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 189 GMLSLGVSYRF 199
>gi|323969105|gb|EGB64410.1| tia protein [Escherichia coli TA007]
Length = 248
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 65/232 (28%), Gaps = 34/232 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL---YETHPLADTINRKTYNSLLPN------GLGIELGH 95
Q +G YV Y + G G+ +G+
Sbjct: 17 SAQALADRGKTGFYVTGKAGASIVTQTDQRFRQDFGDDVYKYKGGDKNDTVFGAGLAVGY 76
Query: 96 N-IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG--------------DVVLKAGYSV 140
+ Q + + Y L + G +++ Y
Sbjct: 77 DFYQHYNVPVRTEVEFYGRGAADSRYTLDTWHSPMGDGGREDTQNRLSVNTLMVNTYYDF 136
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-------GHGSSVVLGIGLD 190
+ + G G A V + S N + + +G G+
Sbjct: 137 RNSSAFTPWVSVGLGYARVHHKATYTDTSWNESGDISDISALHYSGYDNNFAWSIGAGVR 196
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y V DI+L SYRY+ S++ + + D + + +H G+ HF
Sbjct: 197 YDVTPDIALDLSYRYLDAGKSSLSYKDTEGDKYKSEADVKSHDIMFGVTYHF 248
>gi|189010293|ref|ZP_02805910.2| outer membrane protein A [Escherichia coli O157:H7 str. EC4076]
gi|208815928|ref|ZP_03257107.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045]
gi|208822372|ref|ZP_03262691.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042]
gi|209397392|ref|YP_002269625.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115]
gi|217325746|ref|ZP_03441830.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588]
gi|291281957|ref|YP_003498775.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli O55:H7 str. CB9615]
gi|293433254|ref|ZP_06661682.1| OOP family OmpA-OmpF porin [Escherichia coli B088]
gi|300929657|ref|ZP_07145117.1| outer membrane protein A [Escherichia coli MS 187-1]
gi|300949672|ref|ZP_07163655.1| outer membrane protein A [Escherichia coli MS 116-1]
gi|300955388|ref|ZP_07167765.1| outer membrane protein A [Escherichia coli MS 175-1]
gi|301022508|ref|ZP_07186383.1| outer membrane protein A [Escherichia coli MS 196-1]
gi|301643481|ref|ZP_07243528.1| outer membrane protein A [Escherichia coli MS 146-1]
gi|189001311|gb|EDU70297.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4076]
gi|208732576|gb|EDZ81264.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045]
gi|208737857|gb|EDZ85540.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042]
gi|209158792|gb|ACI36225.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115]
gi|217321967|gb|EEC30391.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588]
gi|290761830|gb|ADD55791.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli O55:H7 str. CB9615]
gi|291324073|gb|EFE63495.1| OOP family OmpA-OmpF porin [Escherichia coli B088]
gi|299881205|gb|EFI89416.1| outer membrane protein A [Escherichia coli MS 196-1]
gi|300317723|gb|EFJ67507.1| outer membrane protein A [Escherichia coli MS 175-1]
gi|300450941|gb|EFK14561.1| outer membrane protein A [Escherichia coli MS 116-1]
gi|300462395|gb|EFK25888.1| outer membrane protein A [Escherichia coli MS 187-1]
gi|301078120|gb|EFK92926.1| outer membrane protein A [Escherichia coli MS 146-1]
gi|320187167|gb|EFW61868.1| Outer membrane protein A precursor [Shigella flexneri CDC 796-83]
gi|324019104|gb|EGB88323.1| outer membrane protein A [Escherichia coli MS 117-3]
gi|326338147|gb|EGD61976.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
1125]
Length = 354
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 36 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L IY GG +D N
Sbjct: 91 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSN 138
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 139 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 188
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 189 GMLSLGVSYRF 199
>gi|49182356|gb|AAT57680.1| OmpA [Pasteurella multocida]
Length = 353
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 59/197 (29%), Gaps = 17/197 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
YVG L + ++ G+ G+ I V
Sbjct: 28 FYVGAKAGWASFHDGLNQAKYLEDADATFGLKRNSVTYGVFGGYQITDNFAVELGYDDFG 87
Query: 112 AAKDDSTFYRLKEK-----YFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVE 165
AK K + + LKA Y V D L +Y G + +
Sbjct: 88 RAKLRIAETDQKARDVAKHTNHGAHLSLKASYPVLDGLDVYARVGAALIRSDYKVYDHSD 147
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
K R S V GL+Y +++L Y+++ + + D RV
Sbjct: 148 PAKLPQLK-RTHSTQVSPVFAGGLEYAFMPELALRVEYQWVNNVGKLKDV-----DGNRV 201
Query: 226 DRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 202 DYRPDIGSVTAGLSYRF 218
>gi|315619153|gb|EFU99733.1| outer membrane protein A [Escherichia coli 3431]
Length = 346
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L IY GG +D N
Sbjct: 83 PYKGSVANGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 131 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 180
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 181 GMLSLGVSYRF 191
>gi|146340512|ref|YP_001205560.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
ORS278]
gi|146193318|emb|CAL77334.1| conserved hypothetical protein; putative outer-membrane immunogenic
protein precursor; putative exported protein
[Bradyrhizobium sp. ORS278]
Length = 259
Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 63/217 (29%), Gaps = 22/217 (10%)
Query: 48 DDEYGIWSGNYV----GLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQL-E 100
W+G Y+ G + + L NG + G++ Q
Sbjct: 34 APVAPSWTGFYIFGGGGGGLWNADSNVKTVGGLAITRDQRLGGNGWFGTVGAGYDWQFNG 93
Query: 101 DFVFGINCHTTAAKDDSTFYR------LKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGG 153
++ G+ + +EK ++ GY V ++L Y GG+ G
Sbjct: 94 SWLAGVFADGQFGDIRGSLTDPNFALEGREKLRTSYAAGIRVGYLVAPNVLSYVNGGYSG 153
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYR--Y 205
+ ++L + + H +G G++ +N + YR Y
Sbjct: 154 SDWSGTNLSTLAAGGGATVATTPSFHRDGWFIGGGVENNLNIFGISAPGWFMKTEYRSAY 213
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A + + V K S + F
Sbjct: 214 YSRVTLPETAVGAAAPFQTVTFKPWVQTISTSLVYRF 250
>gi|307250689|ref|ZP_07532626.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857297|gb|EFM89416.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 368
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 32/208 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + H N K N N LG N +G+ +
Sbjct: 26 FYAGAKVGWA-TFHEGVRQFNDKYSNDARYNQDTTNLGIN--RNSVTYGVFGGYQILNQN 82
Query: 117 STFYRLKEKYFIYGDVVLKAG-------------------YSVDSLL-IYGMGGFGGAYV 156
+ + Y YG V G Y V L +YG G
Sbjct: 83 NFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVAVVRN 142
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+K E + +S +LG G++Y + +++ Y+Y+ ++N +
Sbjct: 143 DYKEYDKEE------PTEKTHKLKASTILGAGVEYAILPELAARVEYQYLN-KAGNLNKA 195
Query: 217 NAKSDVERVDRKG--NAHIASLGINMHF 242
+S + VD + + H + G++ F
Sbjct: 196 LVRSGTQDVDFQYAPDIHSVTAGLSYRF 223
>gi|302878485|ref|YP_003847049.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302581274|gb|ADL55285.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 347
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 62/192 (32%), Gaps = 31/192 (16%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G + G I + T ++ + G+E G+N + + G+N +
Sbjct: 22 AGEFTGGWIGLKAGNNNSDVTSLVAAASAKNASTYGLEGGYNWDMGGLLLGVNGFADFNQ 81
Query: 115 DDSTFYRLKEKYFIYGD----VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
YG + +K G + L Y G+ ++
Sbjct: 82 KVDHATATPGVVSNYGSDALGLDVKLGLPSGNWLPYAKVGYASVAAKGVAVT-------- 133
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G GS LG+G++Y S++ Y + + +K N
Sbjct: 134 -------GTGSGAHLGLGVEYKFAPHWSVAGEY------------TTVSDNFNNNTQKLN 174
Query: 231 AHIASLGINMHF 242
+ ++G+N +F
Sbjct: 175 NNNFTIGLNYYF 186
>gi|213646608|ref|ZP_03376661.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
Length = 358
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 28/191 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 36 WYAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
K + K GY + D L +Y GG +S+
Sbjct: 91 PYKGDNTNGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGG 142
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 143 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDN 192
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 193 GLLSVGVSYRF 203
>gi|86553066|gb|ABC72124.2| heme-binding phage-associated protein [Bartonella henselae phage
60457]
Length = 171
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 35/114 (30%), Gaps = 15/114 (13%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P + W+G Y+G + + D
Sbjct: 1 IALISASAAQAADVIVPH--------EVAPTVISAPAFSWTGFYIGGQVGNFSSKVEITD 52
Query: 75 T------INRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYR 121
++ GI G N+ L + + G+ A +
Sbjct: 53 PNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTS 106
>gi|261868250|ref|YP_003256172.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413582|gb|ACX82953.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 356
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 57/198 (28%), Gaps = 22/198 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G H L + + GI G+ I F +
Sbjct: 31 FYAGAKAGWASVRHGLNQYQYEQDGTVVGKAKKNSESYGIFAGYQITDN---FAVEAGYE 87
Query: 112 AAKDDSTFYRLKEK--YFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDN 168
EK + LKA Y V L +Y G V E+
Sbjct: 88 FFGRGKVKEATGEKRITAHGSSLSLKASYPVLHNLDLYARAGAALIRVDYKDNTFGETH- 146
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHSVNNSNAKSDVER 224
+F S V GL+Y + +++L Y+++ + +++
Sbjct: 147 ------KFHDLKVSPVFAGGLEYAILPELALRLEYQWVSRVGNFGKAERKANYYENNESD 200
Query: 225 VDRKGNAHIASLGINMHF 242
V + +LG++ F
Sbjct: 201 VRYSPDIGSVALGLSYRF 218
>gi|45758067|gb|AAO85792.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
Length = 367
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/214 (13%), Positives = 62/214 (28%), Gaps = 44/214 (20%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G ++ GI +G+ +
Sbjct: 26 FYAGAKAGWASFHD------GLTQFDHKDGGEFGIN------RNSVTYGVFGGYQILNQN 73
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVD--------------------------SLLIYGMGG 150
+ + Y +G V ++ D +L +YG G
Sbjct: 74 NFGLATELGYDYFGRVRGNTTFAGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVG 133
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--H 208
V+ + +K+++ + S++LG GL+Y + +++ Y+Y+
Sbjct: 134 VALVRNDY----YVQQNVAKDSRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVG 189
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ A + + H S G++ F
Sbjct: 190 NLDKAARKTANIEGTNFQYSPDIHSVSAGLSYRF 223
>gi|45758063|gb|AAO85790.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 367
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/214 (13%), Positives = 62/214 (28%), Gaps = 44/214 (20%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G ++ GI +G+ +
Sbjct: 26 FYAGAKAGWASFHD------GLTQFDHKDGGEFGIN------RNSVTYGVFGGYQILNQN 73
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVD--------------------------SLLIYGMGG 150
+ + Y +G V ++ D +L +YG G
Sbjct: 74 NFGLATELGYDYFGRVRGNTTFAGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVG 133
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--H 208
V+ + +K+++ + S++LG GL+Y + +++ Y+Y+
Sbjct: 134 VALVRNDY----YVQQNVAKDSRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVG 189
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ A + + H S G++ F
Sbjct: 190 NLDKAARKTANIEGTNFQYSPDIHSVSAGLSYRF 223
>gi|38000008|gb|AAP74760.2| outer membrane protein A precursor [Shigella flexneri 2a]
Length = 327
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 7 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 61
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + D L IY GG +++ A
Sbjct: 62 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGGA 114
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 115 SFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 164
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 165 LLSLGVSYRF 174
>gi|190893269|ref|YP_001979811.1| heat resistant agglutinin 1 protein [Rhizobium etli CIAT 652]
gi|190698548|gb|ACE92633.1| probable heat resistant agglutinin 1 protein [Rhizobium etli CIAT
652]
Length = 278
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 75/262 (28%), Gaps = 39/262 (14%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+F ++++ ++ + DL I + +G Y+ + +
Sbjct: 5 LSGIFAALLIATNAYSADLAPAEPIPEQP--------PEVTVSEATGWYLRGDVGYAFTD 56
Query: 70 HPLADTINRKTYNSLLPNGLG------IELGHNIQLEDFV-------FGINCHTTAAKDD 116
A N + + I G Q+ ++ + +
Sbjct: 57 LRGARYFQGSNANEVDFDDADLDDAWTIGGGVGYQINSYLRTDLTFDYLTEADFRGSTVG 116
Query: 117 STFYRLK----------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL----- 161
+ L Y + + + G + + Y G GG+YV +L
Sbjct: 117 QCGFPLVDCTSTDRSSLTAYTLLANAYVDLG-TYGYVTPYVGAGIGGSYVKWKNLRNVAC 175
Query: 162 -EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + + G + L G V + YRY+ ++ A++
Sbjct: 176 ADDGSFCDDEVTHGGKGNWRFTYALMAGASVDVTCNFKADVGYRYLHIDGGNM-FGYAEN 234
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D+ +AH +G F
Sbjct: 235 GGPGRDKGLSAHEVRVGGRYLF 256
>gi|300974880|ref|ZP_07172763.1| OmpA-like transmembrane domain protein [Escherichia coli MS 200-1]
gi|300308841|gb|EFJ63361.1| OmpA-like transmembrane domain protein [Escherichia coli MS 200-1]
Length = 251
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 34/221 (15%)
Query: 55 SGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHNI--QLE-- 100
SG Y+ + + +G GI G++ Q
Sbjct: 32 SGFYLTGKAGASVVSLSDQRFLSGDEEETSKYKGGDDHDTVFSG-GIAAGYDFYPQFSIP 90
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSVDS---LLIYG 147
+F + D ++ + + ++L A Y + +
Sbjct: 91 VRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFLNDSAFTPWV 150
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSA 201
G G A + + D + GR S LG G+ Y V DI+L
Sbjct: 151 SAGIGYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDL 210
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 211 SYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 251
>gi|288549451|ref|ZP_05967142.2| hypothetical protein ENTCAN_05522 [Enterobacter cancerogenus ATCC
35316]
gi|288319143|gb|EFC58081.1| outer membrane protein A [Enterobacter cancerogenus ATCC 35316]
Length = 358
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 56/191 (29%), Gaps = 28/191 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN--SLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + + G G G+ Q+ +V G
Sbjct: 36 WYAGGKLGWSQFHDTGWYNSSLNNDGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLG 92
Query: 115 -DDSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + G + K GY V D L +Y G S+ +
Sbjct: 93 RMPYKGDNVNGAFKAQGVQLTAKLGYPVTDDLDVYTRLGGMVWRADSSNSIAGDDH---- 148
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G+++ + DI+ Y+++ N D V + +
Sbjct: 149 ------DTGVSPVFAGGVEWAMTRDIATRLEYQWV----------NNIGDGATVGVRPDN 192
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 193 GMLSVGVSYRF 203
>gi|117625198|ref|YP_854245.1| tia invasion determinant [Escherichia coli APEC O1]
gi|218559962|ref|YP_002392875.1| Tia invasion determinant [Escherichia coli S88]
gi|218702439|ref|YP_002410068.1| Tia invasion determinant [Escherichia coli IAI39]
gi|218702831|ref|YP_002410460.1| Tia invasion determinant [Escherichia coli IAI39]
gi|300824790|ref|ZP_07104894.1| OmpA-like transmembrane domain protein [Escherichia coli MS 119-7]
gi|70608343|gb|AAZ04415.1| Tia invasion determinant [Escherichia coli]
gi|115514322|gb|ABJ02397.1| Tia invasion determinant [Escherichia coli APEC O1]
gi|218366731|emb|CAR04490.1| Tia invasion determinant [Escherichia coli S88]
gi|218372425|emb|CAR20299.1| Tia invasion determinant [Escherichia coli IAI39]
gi|218372817|emb|CAR20696.1| Tia invasion determinant [Escherichia coli IAI39]
gi|300522697|gb|EFK43766.1| OmpA-like transmembrane domain protein [Escherichia coli MS 119-7]
gi|315286986|gb|EFU46401.1| OmpA-like transmembrane domain protein [Escherichia coli MS 110-3]
Length = 251
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 66/232 (28%), Gaps = 34/232 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL---YETHPLADTINRKTYNSLLPN------GLGIELGH 95
Q +G YV Y + G G+ +G+
Sbjct: 20 SAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDFGDDVYKYKGGDKNDTVFGAGLAVGY 79
Query: 96 N-IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG--------------DVVLKAGYSV 140
+ Q + + Y L + G +++ Y
Sbjct: 80 DFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGDGGREDTQNRLSVNTLMVNTYYDF 139
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-------GHGSSVVLGIGLD 190
+ + G G A + + S N + + +G G+
Sbjct: 140 RNSSAFTPWVSVGLGYARIHHKATYTDTSWNKSGEVSDISALHYSGYDNNFAWSIGAGVR 199
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + DI+L SYRY+ S++ +A+ D + + +H G+ +F
Sbjct: 200 YDITPDIALDLSYRYLDAGKSSLSYKDAEGDKYKSEADVKSHDIMFGVTYNF 251
>gi|227356882|ref|ZP_03841261.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906]
gi|227162952|gb|EEI47897.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906]
Length = 368
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 60/193 (31%), Gaps = 22/193 (11%)
Query: 57 NYVGLHISRLY--ETHPLADTIN-RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + T D +N G G G+ + G
Sbjct: 34 WYTGGKLGWSQYQSTGNNWDGVNIGNGSTHKDQIGAGAFAGYQY---NQYLGFELGYDWL 90
Query: 114 K---DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
++ K + K Y +D L +Y G G + DS+ +
Sbjct: 91 GRMAYKGSYNNGAFKAQGI-QLTTKLSYPVMDDLDVYTRLG-GMVWRADSTATINATSAG 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ + G S V +G +Y + +I+ Y++I N D ++ +
Sbjct: 149 TQKRFSENDTGVSPVFALGTEYAITPNIATRLEYQWI----------NNIGDKGTLNARP 198
Query: 230 NAHIASLGINMHF 242
+ + S+G+ F
Sbjct: 199 DNGMLSVGVAYRF 211
>gi|165976856|ref|YP_001652449.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|303253773|ref|ZP_07339908.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248471|ref|ZP_07530491.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307257499|ref|ZP_07539265.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|165876957|gb|ABY70005.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302647357|gb|EFL77578.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855039|gb|EFM87222.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306864011|gb|EFM95928.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 368
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 32/208 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + H N K N N LG N +G+ +
Sbjct: 26 FYAGAKVGWA-TFHEGVRQFNDKYSNDARYNQDTTNLGIN--RNSVTYGVFGGYQILNQN 82
Query: 117 STFYRLKEKYFIYGDVVLKAG-------------------YSVDSLL-IYGMGGFGGAYV 156
+ + Y YG V G Y V L +YG G
Sbjct: 83 NFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVAVVRN 142
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+K E + +S +LG G++Y + +++ Y+Y+ ++N +
Sbjct: 143 DYKEYDKEE------PTEKTHKLKASTILGAGVEYAILPELAARIEYQYLN-KAGNLNKA 195
Query: 217 NAKSDVERVDRKG--NAHIASLGINMHF 242
+S + VD + + H + G++ F
Sbjct: 196 LVRSGTQDVDFQYAPDIHSVTAGLSYRF 223
>gi|300896337|ref|ZP_07114879.1| outer membrane protein A [Escherichia coli MS 198-1]
gi|300359748|gb|EFJ75618.1| outer membrane protein A [Escherichia coli MS 198-1]
Length = 354
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 36 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 91 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 138
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 139 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 188
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 189 GMLSLGVSYRF 199
>gi|331672486|ref|ZP_08373276.1| outer membrane protein A [Escherichia coli TA280]
gi|331070392|gb|EGI41757.1| outer membrane protein A [Escherichia coli TA280]
Length = 370
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 52 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 106
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 107 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 154
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 155 FDGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 204
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 205 GMLSLGVSYRF 215
>gi|331671036|ref|ZP_08371869.1| adhesin/virulence factor Hek [Escherichia coli TA271]
gi|331061625|gb|EGI33551.1| adhesin/virulence factor Hek [Escherichia coli TA271]
Length = 246
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 69/221 (31%), Gaps = 34/221 (15%)
Query: 55 SGNYVGLHISRLY----------ETHPLADTINRKTYNSLLPNGLGIELGHNI--QLE-- 100
+G Y+ AD + + +G GI G++ Q
Sbjct: 27 TGFYMTGKAGTSVLSLSNQRFVEGEGEWADRYKGGDDHDTVFSG-GIAAGYDFYPQFSIP 85
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSVDS---LLIYG 147
+F + D ++ + + ++L A Y + +
Sbjct: 86 VRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWV 145
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSA 201
G G A + + D + GR S G G+ Y V DI+L
Sbjct: 146 SAGIGYARIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSFGAGVRYDVTPDIALDL 205
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 206 SYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 246
>gi|312945470|gb|ADR26297.1| outer membrane protein A [Escherichia coli O83:H1 str. NRG 857C]
Length = 365
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 47 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 101
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 102 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 149
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 150 FDGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 199
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 200 GMLSLGVSYRF 210
>gi|62901665|gb|AAY18798.1| OmpA [Cronobacter sakazakii]
Length = 347
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 60/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + T G G G+ Q+ +V G
Sbjct: 28 WYAGGKLGWSQFHDTGFIPNDGPT--HESQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
K + K GY V D L +Y GG +D+S N
Sbjct: 83 PYKGDTVNGAFKAQGV-QLTAKLGYPVTDDLDVYTRLGGMVWR-----------ADSSSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G G S V G+++ + DI+ Y+++ N D + V + +
Sbjct: 131 IAGDDHDTGVSPVFAGGVEWAMTRDIATRLEYQWV----------NNIGDAQTVGARPDN 180
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 181 GMLSVGVSYRF 191
>gi|331654483|ref|ZP_08355483.1| adhesin/virulence factor Hek [Escherichia coli M718]
gi|331047865|gb|EGI19942.1| adhesin/virulence factor Hek [Escherichia coli M718]
Length = 246
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 34/221 (15%)
Query: 55 SGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHNI--QLE-- 100
SG Y+ + + +G GI G++ Q
Sbjct: 27 SGFYLTGKAGTSVVSLSDQRFLSGDEEETSKYKGGDDHDTVFSG-GIAAGYDFYPQFSIP 85
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSVDS---LLIYG 147
+F + D ++ + + ++L A Y + +
Sbjct: 86 VRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWI 145
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSA 201
G G A + + D + GR S LG G+ Y V DI+L
Sbjct: 146 SAGIGYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWNLGAGVRYDVTPDIALDL 205
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 206 SYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 246
>gi|238055498|sp|B7LNW7|OMPA_ESCF3 RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
Length = 351
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 25/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K + K GY + D L IY G + V ++ KN
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESEKN- 140
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G S V G+++ + +I+ Y++ +N D + + +
Sbjct: 141 ----HDTGVSPVFAGGVEWAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 186
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 187 LLSLGVSYRF 196
>gi|51320045|gb|AAU00343.1| Pap31 [Bartonella phage CO-04-1]
Length = 186
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 51/190 (26%), Gaps = 51/190 (26%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
++++ + + A D+ +P ++ + W+G Y+G + +
Sbjct: 1 VIALISTSAAQAADIVIPHEV----VSPRVTPIVSPSTFSWTGFYLGGQVGNFSSKVEIT 56
Query: 74 D------TINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAK------------ 114
D + GI G NI+L + + G+ A
Sbjct: 57 DSGKKNEFFGKDQTPKPSGFMGGIYAGSNIELGNNLILGVETDAVWADRGDTKTLSTKEL 116
Query: 115 ---------------------------DDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIY 146
D+ Y K G + G++ + ++ Y
Sbjct: 117 EGDDLEDFNNTFTDAGIKLGDDEKFVAGDTGSYSFTYKEKWSGATRARIGFAAANCIMPY 176
Query: 147 GMGGFGGAYV 156
GG
Sbjct: 177 FAGGESLVNS 186
>gi|157960752|ref|YP_001500786.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845752|gb|ABV86251.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 356
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 63/225 (28%), Gaps = 46/225 (20%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN 87
LY EAD++ + Y+G +++ + N +
Sbjct: 18 LYQSLGSVYAAEADSSEPANEFAPY----FYLGAKAGQMHYQNACESWSVSCDGNYV--- 70
Query: 88 GLGIELGHN-IQLEDFVFGINCHT--------TAAKDDSTFYRLKEKYFIYGDVVLKAGY 138
G G G+ Q G ++ + V + G
Sbjct: 71 GFGGFAGYQAWQY----LGFETAYLDLGEAVSGYSESAVNNTYVGSMKGWELSAVTRFGL 126
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
S D L G F +++ R G + +LG GL Y ++
Sbjct: 127 SEDFELFAKAGSFYW------------DGDNQGPYSRNSDSGWAPMLGAGLAYQISPSWV 174
Query: 199 LSASYRYIP-HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+YI + SN H+ +LGI+ F
Sbjct: 175 ARLEYQYIDKLGSDLIGGSNG-------------HLTTLGISYRF 206
>gi|293390327|ref|ZP_06634661.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290950861|gb|EFE00980.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 356
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 57/198 (28%), Gaps = 22/198 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G H L + + GI G+ I F +
Sbjct: 31 FYAGAKAGWASVRHGLNQYQYEQDGTVVGKAKKNSEAYGIFAGYQITDN---FAVEAGYE 87
Query: 112 AAKDDSTFYRLKEK--YFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDN 168
EK + LKA Y V L +Y G V E+
Sbjct: 88 FFGRGKVKEATGEKRITAHGSSLSLKASYPVLHNLDLYARAGAALIRVDYKDNTFGETH- 146
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHSVNNSNAKSDVER 224
+F S V GL+Y + +++L Y+++ + +++
Sbjct: 147 ------KFHDLKVSPVFAGGLEYAILPELALRLEYQWVSRVGNFGKAERKANYYENNESD 200
Query: 225 VDRKGNAHIASLGINMHF 242
V + +LG++ F
Sbjct: 201 VRYSPDIGSVALGLSYRF 218
>gi|33151318|ref|NP_872671.1| major outer membrane protein [Haemophilus ducreyi 35000HP]
gi|1872470|gb|AAB49273.1| major outer membrane protein [Haemophilus ducreyi]
gi|33147538|gb|AAP95060.1| major outer membrane protein [Haemophilus ducreyi 35000HP]
Length = 403
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/229 (11%), Positives = 65/229 (28%), Gaps = 43/229 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN------------SLLPNGLGIELGHN-IQLEDFV 103
Y+G + ++ + G+ G+
Sbjct: 26 FYLGAKAGWASTHKDINQFDSKYQNDKRYNPEFTTWGIHRNSVTYGVFGGYQIFNQNKMG 85
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIY----------------------------GDVVLK 135
+ + K + ++ LK
Sbjct: 86 LALELGYDYYGQMKGSSQNKVALDVPTPRGPRPPIHKPKPKGDLNRQFKHTAHGANLSLK 145
Query: 136 AGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS-KNAKGRFDGHGSSVVLGIGLDYMV 193
Y + L +YG G G + ++S + + + S++LG G++Y +
Sbjct: 146 PSYEILPNLDVYGKVGMGLVRNDYKFILDLQSKDQHVKDETKLHTLKPSLLLGTGVEYAI 205
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++L Y+Y+ + + K+ + + H S+G++ F
Sbjct: 206 TPELALRTEYQYLNKAGNLYKAAKYKNISTSLAYAPDIHSVSVGLSYRF 254
>gi|126208885|ref|YP_001054110.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae L20]
gi|126097677|gb|ABN74505.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 368
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 32/208 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + H N K N N LG N +G+ +
Sbjct: 26 FYAGAKVGWA-TFHEGVRQFNDKYSNDARYNQDTTNLGIN--RNSVAYGVFGGYQILNQN 82
Query: 117 STFYRLKEKYFIYGDVVLKAG-------------------YSVDSLL-IYGMGGFGGAYV 156
+ + Y YG V G Y V L +YG G
Sbjct: 83 NFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVAVVRN 142
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+K E + +S +LG G++Y + +++ Y+Y+ ++N +
Sbjct: 143 DYKEYDKEE------PTEKTHKLKASTILGAGVEYAILPEVAARVEYQYLN-KAGNLNKA 195
Query: 217 NAKSDVERVDRKG--NAHIASLGINMHF 242
+S + VD + + H + G++ F
Sbjct: 196 LVRSGTQDVDFQYAPDIHSVTAGLSYRF 223
>gi|62548381|gb|AAX86828.1| outer membrane protein [Pasteurella multocida]
Length = 358
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 59/201 (29%), Gaps = 20/201 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGL-------GIELGHNIQLEDFVFGINCH 109
YVG L + + + G G+ G+ I V
Sbjct: 28 FYVGAKAGWASFHDGLNQAKDLSSAANSGTFGFKRNSVTYGVFGGYQITDNFAVELGYDD 87
Query: 110 TTAAKDDSTF-----YRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK 163
AK + + + + LKA Y V L +Y G
Sbjct: 88 FGRAKLRHSLPELKAATVAKHTNYGAHLSLKASYPVLEGLDVYARVGAALVRSDYKFYND 147
Query: 164 VESDNSK--NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + R S V GL+Y +++L Y+++ + +
Sbjct: 148 AKGEPVLDLQNYKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDAKG---- 203
Query: 222 VERVDRKGNAHIASLGINMHF 242
ERVD + + + G++ F
Sbjct: 204 -ERVDYRPDIGSVTAGLSYRF 223
>gi|329755856|gb|AEC04325.1| outer membrane protein A [Pasteurella multocida]
Length = 354
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 60/201 (29%), Gaps = 24/201 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGL-------GIELGHNIQLEDFVFGINCH 109
YVG L + + G G+ G+ I F +
Sbjct: 28 FYVGAKAGWASFHDGLNQVKDFDKAGNAGSFGFKRNSVTYGVFGGYQITDN---FAVELG 84
Query: 110 TTAAKDDSTFYRLKEKYFIYGD-------VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSL 161
+ EK + LKA Y V L +Y G
Sbjct: 85 YDDFGRAKLRNTVGEKTNTIAKHTNHGAHLSLKASYPVLEGLDVYARVGAALVRSDYKLY 144
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+K E+ S R S V GL+Y +++L Y+++ + N
Sbjct: 145 DK-ENTPSLQDYQRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKNAKG---- 199
Query: 222 VERVDRKGNAHIASLGINMHF 242
ERVD + + + G++ F
Sbjct: 200 -ERVDYRPDIGSVTAGLSYRF 219
>gi|82776247|ref|YP_402596.1| outer membrane protein A [Shigella dysenteriae Sd197]
gi|81240395|gb|ABB61105.1| outer membrane protein 3a [Shigella dysenteriae Sd197]
Length = 350
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 61/191 (31%), Gaps = 28/191 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L IY GG +++
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVW-------RADTKANVPGG 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 135 ASFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 184
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 185 GLLSLGVSYRF 195
>gi|329755830|gb|AEC04312.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 60/201 (29%), Gaps = 20/201 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGL-------GIELGHNIQLEDFVFGINCH 109
YVG + L + + + G G+ G+ I V
Sbjct: 28 FYVGAKAGWAFFHDGLNQAKDLSSAANSGTFGFKRNSVTYGVFGGYQITDNFAVELGYDD 87
Query: 110 TTAAKDDSTF-----YRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK 163
AK + + + + LKA Y V L +Y G
Sbjct: 88 FGRAKLRHSLPELKAATVAKHTNHGAHLSLKASYPVLEGLDVYARVGAALVRSDYKFYND 147
Query: 164 VESDNSK--NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + R S V GL+Y +++L Y+++ + +
Sbjct: 148 AKGEPVLDLQNYKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDAKG---- 203
Query: 222 VERVDRKGNAHIASLGINMHF 242
ERVD + + + G++ F
Sbjct: 204 -ERVDYRPDIGSVTAGLSYRF 223
>gi|49182354|gb|AAT57679.1| OmpA [Pasteurella multocida]
Length = 353
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 59/197 (29%), Gaps = 17/197 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
YVG L + + G+ G+ I + V
Sbjct: 28 FYVGAKAGWASFHDGLNQAKYLEAPEATFGFKRNSVTYGVFGGYQITDDFAVELGYDDFG 87
Query: 112 AAKDDSTFYRLKEK-----YFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVE 165
AK K + + LKA Y V D L +Y G + +
Sbjct: 88 RAKLRIAETDQKARDVAKHTNHGAHLSLKASYPVLDGLDVYARVGAALIRSDYKVYDHSD 147
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
K R S V GL+Y +++L Y+++ + + D RV
Sbjct: 148 PAKLPQLK-RTHSTQVSPVFAGGLEYAFMPELALRVEYQWVNNVGKLKDV-----DGNRV 201
Query: 226 DRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 202 DYRPDIGSVTAGLSYRF 218
>gi|46812309|gb|AAT02227.1| outer membrane protein A precursor [Shigella boydii]
Length = 346
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L IY GG +D N
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 131 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 180
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 181 GMLSLGVSYRF 191
>gi|306812596|ref|ZP_07446789.1| outer membrane protein A [Escherichia coli NC101]
gi|305853359|gb|EFM53798.1| outer membrane protein A [Escherichia coli NC101]
Length = 365
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 47 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 101
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 102 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 149
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 150 FDGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 199
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 200 GMLSLGVSYRF 210
>gi|49182350|gb|AAT57677.1| OmpA [Pasteurella multocida]
Length = 351
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 63/196 (32%), Gaps = 17/196 (8%)
Query: 57 NYVGLHISRLYETHPLA---DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
YVG L D T G+ G+ I V A
Sbjct: 28 FYVGAKAGWASFHDSLNQFNDITEPATGFKRNSVTYGVFGGYQITDNFAVELGYDDFGRA 87
Query: 114 KDDSTFYRLKEKYFIY------GDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVES 166
K +T + KE + LKA Y V D L +Y G +K +
Sbjct: 88 KARATDPKTKETVDAAKHTNHGAHLSLKASYPVLDGLDVYARVGAALVRSDYKVYDKEPA 147
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D + R S V GL+Y +++L Y+++ + + ERVD
Sbjct: 148 D--LSFLKRTHSTQVSPVFAGGLEYAFMPELALRVEYQWLNNVGKLKDAKG-----ERVD 200
Query: 227 RKGNAHIASLGINMHF 242
+ + + G++ F
Sbjct: 201 YRPDIGSVTAGLSYRF 216
>gi|218557855|ref|YP_002390768.1| outer membrane protein A [Escherichia coli S88]
gi|7188818|gb|AAF37887.1|AF234269_1 outer membrane protein A [Escherichia coli RS218]
gi|218364624|emb|CAR02310.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli S88]
gi|294493105|gb|ADE91861.1| outer membrane protein A [Escherichia coli IHE3034]
gi|323953341|gb|EGB49207.1| OmpA transmembrane domain-containing protein [Escherichia coli
H252]
gi|323958256|gb|EGB53965.1| OmpA transmembrane domain-containing protein [Escherichia coli
H263]
Length = 346
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 131 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 180
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 181 GMLSLGVSYRF 191
>gi|309786688|ref|ZP_07681308.1| outer membrane protein A [Shigella dysenteriae 1617]
gi|129143|sp|P02935|OMPA_SHIDY RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|46945|emb|CAA24638.1| unnamed protein product [Shigella dysenteriae]
gi|308925381|gb|EFP70868.1| outer membrane protein A [Shigella dysenteriae 1617]
Length = 351
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K + K GY + D L +Y G + V ++ KN
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWRADTKAHNNVTGESEKN- 140
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G S V G+++ + +I+ Y++ +N D + + +
Sbjct: 141 ----HDTGVSPVFAGGVEWAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 186
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 187 LLSLGVSYRF 196
>gi|463911|gb|AAC13751.1| heat resistant agglutinin 1 [Escherichia coli]
Length = 264
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 67/232 (28%), Gaps = 35/232 (15%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELG 94
Q +G YV + + +G GI G
Sbjct: 34 STQALADESKTGFYVTGKAGASVMSLADQRFLSGNGEETSKYKGGDGHDTVFSG-GIAAG 92
Query: 95 HNI--QLE-------DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSV 140
++ Q +F + D ++ + + ++L A Y
Sbjct: 93 YDFYPQFSIPVRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDF 152
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF-------DGHGSSVVLGIGLD 190
+ + G G A I + + + + LG G+
Sbjct: 153 RNDSAFTPWVSAGIGYAKEIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSLGAGVR 212
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y V DI+L SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 213 YDVTPDIALDLSYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 264
>gi|323462898|pdb|3NB3|A Chain A, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
gi|323462899|pdb|3NB3|B Chain B, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
gi|323462900|pdb|3NB3|C Chain C, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
Length = 346
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENKLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L IY GG +D N
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWR-----------ADTYSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 131 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 180
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 181 GMLSLGVSYRF 191
>gi|309701236|emb|CBJ00536.1| outer membrane protein A [Escherichia coli ETEC H10407]
Length = 346
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L IY GG +D N
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 131 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 180
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 181 GMLSLGVSYRF 191
>gi|15800816|ref|NP_286832.1| outer membrane protein A [Escherichia coli O157:H7 EDL933]
gi|15830295|ref|NP_309068.1| outer membrane protein A [Escherichia coli O157:H7 str. Sakai]
gi|16128924|ref|NP_415477.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. MG1655]
gi|74311514|ref|YP_309933.1| outer membrane protein A [Shigella sonnei Ss046]
gi|89107807|ref|AP_001587.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. W3110]
gi|157160478|ref|YP_001457796.1| outer membrane protein A [Escherichia coli HS]
gi|170080615|ref|YP_001729935.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. DH10B]
gi|187730326|ref|YP_001880845.1| outer membrane protein A [Shigella boydii CDC 3083-94]
gi|188493530|ref|ZP_03000800.1| outer membrane protein P5 [Escherichia coli 53638]
gi|209918209|ref|YP_002292293.1| outer membrane protein A [Escherichia coli SE11]
gi|218694432|ref|YP_002402099.1| outer membrane protein A [Escherichia coli 55989]
gi|238900215|ref|YP_002926011.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952]
gi|253774014|ref|YP_003036845.1| outer membrane protein A [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161071|ref|YP_003044179.1| outer membrane protein A [Escherichia coli B str. REL606]
gi|254792157|ref|YP_003076994.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14359]
gi|260843206|ref|YP_003220984.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009]
gi|260854249|ref|YP_003228140.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368]
gi|260867129|ref|YP_003233531.1| outer membrane protein A [Escherichia coli O111:H- str. 11128]
gi|261227460|ref|ZP_05941741.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK2000]
gi|261256117|ref|ZP_05948650.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK966]
gi|307311656|ref|ZP_07591296.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli W]
gi|312971089|ref|ZP_07785268.1| outer membrane protein A [Escherichia coli 1827-70]
gi|71159604|sp|P0A911|OMPA_ECO57 RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II*; Flags: Precursor
gi|71159605|sp|P0A910|OMPA_ECOLI RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II*; Flags: Precursor
gi|12514142|gb|AAG55443.1|AE005286_2 outer membrane protein 3a (II*;G;d) [Escherichia coli O157:H7 str.
EDL933]
gi|42161|emb|CAA23588.1| ompA protein [Escherichia coli]
gi|1651465|dbj|BAA35715.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K12
substr. W3110]
gi|1787191|gb|AAC74043.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. MG1655]
gi|13360501|dbj|BAB34464.1| outer membrane protein 3a [Escherichia coli O157:H7 str. Sakai]
gi|32329155|gb|AAP74759.1| outer membrane protein A precursor [Shigella sonnei]
gi|73854991|gb|AAZ87698.1| outer membrane protein 3a (II*;G;d) [Shigella sonnei Ss046]
gi|157066158|gb|ABV05413.1| outer membrane protein A [Escherichia coli HS]
gi|169888450|gb|ACB02157.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. DH10B]
gi|187427318|gb|ACD06592.1| outer membrane protein A [Shigella boydii CDC 3083-94]
gi|188488729|gb|EDU63832.1| outer membrane protein P5 [Escherichia coli 53638]
gi|209774438|gb|ACI85531.1| outer membrane protein 3a [Escherichia coli]
gi|209774440|gb|ACI85532.1| outer membrane protein 3a [Escherichia coli]
gi|209774442|gb|ACI85533.1| outer membrane protein 3a [Escherichia coli]
gi|209774444|gb|ACI85534.1| outer membrane protein 3a [Escherichia coli]
gi|209774446|gb|ACI85535.1| outer membrane protein 3a [Escherichia coli]
gi|209911468|dbj|BAG76542.1| outer membrane protein OmpA [Escherichia coli SE11]
gi|218351164|emb|CAU96868.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli 55989]
gi|238861958|gb|ACR63956.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952]
gi|242376772|emb|CAQ31485.1| outer membrane protein 3a (II*;G;d) [Escherichia coli BL21(DE3)]
gi|253325058|gb|ACT29660.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972972|gb|ACT38643.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli B str.
REL606]
gi|253977186|gb|ACT42856.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BL21(DE3)]
gi|254591557|gb|ACT70918.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli O157:H7
str. TW14359]
gi|257752898|dbj|BAI24400.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368]
gi|257758353|dbj|BAI29850.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009]
gi|257763485|dbj|BAI34980.1| outer membrane protein A [Escherichia coli O111:H- str. 11128]
gi|260449897|gb|ACX40319.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli DH1]
gi|306908211|gb|EFN38710.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli W]
gi|310336850|gb|EFQ02017.1| outer membrane protein A [Escherichia coli 1827-70]
gi|315060242|gb|ADT74569.1| outer membrane protein A [Escherichia coli W]
gi|315135605|dbj|BAJ42764.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli DH1]
gi|320648407|gb|EFX17062.1| outer membrane protein A [Escherichia coli O157:H- str. H 2687]
gi|320659566|gb|EFX27129.1| outer membrane protein A [Escherichia coli O55:H7 str. USDA 5905]
gi|320664337|gb|EFX31488.1| outer membrane protein A [Escherichia coli O157:H7 str. LSU-61]
gi|323157149|gb|EFZ43272.1| outer membrane protein A [Escherichia coli EPECa14]
gi|323159587|gb|EFZ45567.1| outer membrane protein A [Escherichia coli E128010]
gi|323174936|gb|EFZ60551.1| outer membrane protein A [Escherichia coli LT-68]
gi|323175416|gb|EFZ61011.1| outer membrane protein A [Escherichia coli 1180]
gi|323185333|gb|EFZ70697.1| outer membrane protein A [Escherichia coli 1357]
gi|323379198|gb|ADX51466.1| OmpA/MotB domain protein [Escherichia coli KO11]
gi|323938062|gb|EGB34324.1| OmpA transmembrane domain-containing protein [Escherichia coli
E1520]
gi|323942872|gb|EGB39037.1| OmpA transmembrane domain-containing protein [Escherichia coli
E482]
gi|323947254|gb|EGB43262.1| OmpA transmembrane domain-containing protein [Escherichia coli
H120]
gi|323962843|gb|EGB58418.1| OmpA transmembrane domain-containing protein [Escherichia coli
H489]
gi|323973167|gb|EGB68359.1| OmpA transmembrane domain-containing protein [Escherichia coli
TA007]
gi|324117179|gb|EGC11087.1| OmpA transmembrane domain-containing protein [Escherichia coli
E1167]
Length = 346
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L IY GG +D N
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 131 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 180
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 181 GMLSLGVSYRF 191
>gi|332092496|gb|EGI97569.1| outer membrane protein A [Shigella boydii 5216-82]
gi|332095872|gb|EGJ00879.1| outer membrane protein A [Shigella dysenteriae 155-74]
Length = 351
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K + K GY + D L +Y G + V ++ KN
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWRADTKAHNNVTGESEKN- 140
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G S V G+++ + +I+ Y++ +N D + + +
Sbjct: 141 ----HDTGVSPVFAGGVEWAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 186
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 187 LLSLGVSYRF 196
>gi|324009900|gb|EGB79119.1| outer membrane protein A [Escherichia coli MS 57-2]
Length = 354
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 36 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 91 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 138
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 139 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 188
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 189 GMLSLGVSYRF 199
>gi|300982950|ref|ZP_07176384.1| outer membrane protein A [Escherichia coli MS 200-1]
gi|300307039|gb|EFJ61559.1| outer membrane protein A [Escherichia coli MS 200-1]
gi|315296266|gb|EFU55573.1| outer membrane protein A [Escherichia coli MS 16-3]
gi|324012909|gb|EGB82128.1| outer membrane protein A [Escherichia coli MS 60-1]
Length = 354
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 36 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 91 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 138
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 139 FDGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 188
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 189 GMLSLGVSYRF 199
>gi|146311126|ref|YP_001176200.1| outer membrane protein A [Enterobacter sp. 638]
gi|145318002|gb|ABP60149.1| OmpA domain protein transmembrane region-containing protein
[Enterobacter sp. 638]
Length = 351
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 56/191 (29%), Gaps = 28/191 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN--SLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + + G G G+ Q+ +V G
Sbjct: 28 WYAGGKLGWSQFHDTGWYNSSLNNDGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLG 84
Query: 115 -DDSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + G + K GY V D L +Y G S+ +
Sbjct: 85 RMPYKGDNVNGAFKAQGVQLTAKLGYPVTDDLDVYTRLGGMVWRADSSNSIAGDDH---- 140
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G+++ + DI+ Y+++ N D V + +
Sbjct: 141 ------DTGVSPVFAGGVEWAMTRDIATRLEYQWV----------NNIGDGNTVGVRPDN 184
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 185 GMLSVGVSYRF 195
>gi|148555268|ref|YP_001262850.1| hypothetical protein Swit_2353 [Sphingomonas wittichii RW1]
gi|148500458|gb|ABQ68712.1| hypothetical protein Swit_2353 [Sphingomonas wittichii RW1]
Length = 273
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/248 (15%), Positives = 69/248 (27%), Gaps = 61/248 (24%)
Query: 53 IWSGNYVGLHISRLY-------------------------------ETHPLADTINRKTY 81
W+G YVG + + P + +
Sbjct: 29 NWTGFYVGGQLGYAWQPRDGDEQVLFDRNLDGNFGDAFPNFAPGSCGGAPTSASPATGCA 88
Query: 82 NSLLPNGLGIELGHNIQLEDF---VFGINCHT---------TAAKDDSTFYRLKEKYFIY 129
+ G++ Q + V G TA Y+++ K
Sbjct: 89 KDNDGTTWKVHAGYDYQFGETSGPVIGAVAEYGKTYLYDNVTAFSTTPAVYKMQAKMRSG 148
Query: 130 GDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + + GYS D+ LIYG GG + +S ++ D G G
Sbjct: 149 GALRARGGYSFDTGTLIYGTGGLAYGKIRNSFSTSNGVNSFTVDGASKDAW--GYNYGGG 206
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNN--------------SNAKSDVERVDRKGNAHIA 234
++ V S+ A Y + + + + +D +R K H
Sbjct: 207 IEQKV-GRFSVGALYLFTSLKNNDSTVRASGGPAGGPFTAQNASGTDFKRSFSKFGYHSL 265
Query: 235 SLGINMHF 242
++ HF
Sbjct: 266 LATVSYHF 273
>gi|116253702|ref|YP_769540.1| heat resistant agglutinin 1 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258350|emb|CAK09452.1| putative heat resistant agglutinin 1 [Rhizobium leguminosarum bv.
viciae 3841]
Length = 281
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 78/262 (29%), Gaps = 39/262 (14%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+F ++++ ++ + DL I + +G Y+ + +
Sbjct: 8 LSGIFAALLIATNAYSADLAPAEPIPEQP--------PEVTVTEATGWYLRGDVGYAFTD 59
Query: 70 HPLADTINRKT------YNSLLPNGLGIELGHNIQLEDFV-------FGINCHTTAAKDD 116
A ++ L + + G Q+ ++ + +
Sbjct: 60 LRGARYFQGSNATEVDFDDADLDDTWTVGGGVGYQINSYLRTDLTFDYMTEADFNGSTVG 119
Query: 117 STFYRLK----------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+ L Y + + + G + + Y G GG+YV +L V
Sbjct: 120 QCGFPLVDCTSSDRSSLTAYTLLANAYVDLG-TYGYVTPYVGAGIGGSYVKWKNLSNVAC 178
Query: 167 DNSKN------AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + + G + L G V +I YRY+ ++ A +
Sbjct: 179 ADDGSFCDDEVSHGGKGNWRFTYALMAGASIDVTCNIKADVGYRYLHIDGGNM-FGYADN 237
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D+ +AH A +G F
Sbjct: 238 GGPGRDKGLSAHEARVGARYLF 259
>gi|238754341|ref|ZP_04615697.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473]
gi|238707374|gb|EEP99735.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473]
Length = 355
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 53/191 (27%), Gaps = 24/191 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + H + + + LG Q + G
Sbjct: 28 WYTGGKLGWSQF-HDVGTGSDISNDGPTHKSQLGAGAFVGYQANQY-LGFEMGYDWLGRM 85
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVESDNSKN 171
K + K Y + L GG + ++ S N
Sbjct: 86 PYKGDTVNGAFKAQGV-QLAAKLSYPIAQDLDLYTRLGGMVW------RADASVNEPSTN 138
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G S + +GL+Y V + + Y+++ N D V + +
Sbjct: 139 SHASAHDTGVSPLAAVGLEYAVTKNWATRLDYQWV----------NNIGDRGTVGARPDN 188
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 189 GMLSVGVSYRF 199
>gi|114809812|gb|ABI81409.1| bacteria phage-associated hemin-binding membrane protein Pap31
[Bartonella vinsonii subsp. berkhoffii]
Length = 182
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 51/184 (27%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
++++ + + A D+ +P ++ + W+G Y+G + +
Sbjct: 3 VIALISTSAAQAADIVVPHEV----VSPRVTPIVSPSTFSWTGFYLGGQVGNFSSKVEIT 58
Query: 74 D------TINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAK------------ 114
D + GI G NI+L + + G+ A
Sbjct: 59 DSGKKNEFFGKDQTPKPSGFMGGIYAGSNIELGNNLILGVETDAVWADRGDTKTLSTKEL 118
Query: 115 ---------------------------DDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIY 146
D+ Y K G + G++ + ++ Y
Sbjct: 119 EGDDLEDFNNTFTDAGIKLGDDEKFVAGDTGSYSFTYKEKWSGATRARIGFAAANCIMPY 178
Query: 147 GMGG 150
GG
Sbjct: 179 VAGG 182
>gi|296103033|ref|YP_003613179.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295057492|gb|ADF62230.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 359
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 53/192 (27%), Gaps = 30/192 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN--SLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + G G G+ Q+ +V G
Sbjct: 36 WYAGGKLGWSQFHDTGWYNSANNNDGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLG 92
Query: 115 ---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
K + K GY V D L +Y G S+ +
Sbjct: 93 RMPYKGNETNGAFKAQGV-QLTAKLGYPVTDDLDVYTRLGGMVWRADSSNSNAGDDH--- 148
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G S V G+++ + DI+ Y+++ N D V + +
Sbjct: 149 -------DTGVSPVFAGGVEWAMTRDIATRLEYQWV----------NNIGDGATVGVRPD 191
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 192 NGMLSVGVSYRF 203
>gi|15602651|ref|NP_245723.1| hypothetical protein PM0786 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721089|gb|AAK02870.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 353
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 58/197 (29%), Gaps = 17/197 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
YVG L + + G+ G+ I V
Sbjct: 28 FYVGAKAGWASFHDGLNQAKYLEAPEATFGFKRNSVTYGVFGGYQITDNFAVELGYDDFG 87
Query: 112 AAKDDSTFYRLKEK-----YFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVE 165
AK K K + LKA Y V D L IY G + +
Sbjct: 88 RAKLRMAEKDQKAKDAAKHTNHGAHLSLKASYPVLDGLDIYARVGAALIRSDYKVYDHSD 147
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
K R S V GL+Y +++L Y+++ + + ERV
Sbjct: 148 PAKLPQFK-RTHSTQVSPVFAGGLEYAFMPELALRVEYQWVNNVGKVKDVLG-----ERV 201
Query: 226 DRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 202 DYRPDIGSVTAGLSYRF 218
>gi|16759951|ref|NP_455568.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142277|ref|NP_805619.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|68052784|sp|Q8Z7S0|OMPA_SALTI RecName: Full=Outer membrane protein A; Flags: Precursor
gi|25298549|pir||AI0626 outer membrane protein A STY1091 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502245|emb|CAD08196.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137907|gb|AAO69468.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 350
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 28/191 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 28 WYAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
K + K GY + D L +Y GG +S+
Sbjct: 83 PYKGDNTNGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGG 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 135 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDN 184
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 185 GLLSVGVSYRF 195
>gi|332561456|ref|ZP_08415769.1| hypothetical protein RSWS8N_20484 [Rhodobacter sphaeroides WS8N]
gi|332273958|gb|EGJ19276.1| hypothetical protein RSWS8N_20484 [Rhodobacter sphaeroides WS8N]
Length = 160
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 54/181 (29%), Gaps = 27/181 (14%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
WSG YVG + + G+ G+ V G
Sbjct: 5 VTDWSGFYVGGQLGYGDINTDIDGY-------DGNGAIGGVHAGYRYDFGRAVVGAELAY 57
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + ++ + L AG + L+Y G A V + + +
Sbjct: 58 DISNIE--IGDADDELDNLATLKLMAGGKIGRGLLYATVGGTWADVSSDAGDPDD----- 110
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
V GIG D+M+N S+ A + H S +++ +D + K
Sbjct: 111 -----------GYVYGIGYDHMLNDRWSIGAE--LLRHTWDSFDDAGTDADATTLQAKVG 157
Query: 231 A 231
Sbjct: 158 F 158
>gi|170743796|ref|YP_001772451.1| PE-PGRS family protein [Methylobacterium sp. 4-46]
gi|168198070|gb|ACA20017.1| PE-PGRS family protein [Methylobacterium sp. 4-46]
Length = 502
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 47/202 (23%), Gaps = 51/202 (25%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG--------------------- 90
WSG Y+G + T T L P G
Sbjct: 33 LDWSGFYLGAQTG-GFATGQGRRTFVSGDGGGLTPTVFGGRGGRTGIVAGTVEGRTIFEG 91
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ G+N Q D V G+ +AA + + + G + L+YG G
Sbjct: 92 VHAGYNWQRGDLVGGVEGDLSAAGPLD---------DVLASLRGRVGVATGRALVYGTAG 142
Query: 151 FGGAYVIDSSLEKVESDNSKNAK--------------------GRFDGHGSSVVLGIGLD 190
G L N N + G GL+
Sbjct: 143 LGILSAPGGRLGVFVGGNGGNGGNAGPGGAGGAGGNGFGTLTISQPGATRLGFAGGAGLE 202
Query: 191 YMVNYDISLSASYRYIPHHIHS 212
+ + Y S
Sbjct: 203 VRLTPRVGAGVEALYFLFDKGS 224
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 56/237 (23%), Gaps = 55/237 (23%)
Query: 50 EYGIWSGNYVGLHISRLYETHPL--------------------------ADTINRKTYNS 83
W+G Y+G LY +
Sbjct: 271 AAPSWAGLYLGAQFGALYSPSGTRLAAAALANGEAGGAGTRGIDGGGGGGGAVAFAALQR 330
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS- 142
G+ LG N Q V+G A + + G + + G+ +D
Sbjct: 331 GASALGGLHLGANAQSARLVYGAEADIDAGT--------DANHRVLGSLRGRLGWVLDRD 382
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG-------------------RFDGHGSSV 183
LL+YG G G A L + G R
Sbjct: 383 LLLYGTAGLGLARDEGVRLVFAGNGGPGGNGGPLVAGPGGAGGAGGQALALRAADTQVGF 442
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
V G GL + ++ Y A V R +A + ++
Sbjct: 443 VAGAGLQARLTDRLTAGVEGLYYGFRASGAALPGAGRAVA-AGRDNDAVVLRTRLSF 498
>gi|218704380|ref|YP_002411899.1| outer membrane protein A [Escherichia coli UMN026]
gi|293404256|ref|ZP_06648250.1| outer membrane protein A [Escherichia coli FVEC1412]
gi|298380040|ref|ZP_06989645.1| outer membrane protein A [Escherichia coli FVEC1302]
gi|51235574|gb|AAT98588.1| outer membrane protein A [Escherichia coli]
gi|218431477|emb|CAR12355.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli UMN026]
gi|291428842|gb|EFF01867.1| outer membrane protein A [Escherichia coli FVEC1412]
gi|298279738|gb|EFI21246.1| outer membrane protein A [Escherichia coli FVEC1302]
Length = 346
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 131 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 180
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 181 GMLSLGVSYRF 191
>gi|51235578|gb|AAT98590.1| outer membrane protein A [Escherichia coli]
Length = 346
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 63/190 (33%), Gaps = 30/190 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 117 STFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+K Y G + K GY + D L IY GG +D N
Sbjct: 83 PYKGSVKNGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSNV 131
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 132 YGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 181
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 182 MLSLGVSYRF 191
>gi|223041685|ref|ZP_03611882.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
202]
gi|223017549|gb|EEF15963.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
202]
Length = 344
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 55/207 (26%), Gaps = 37/207 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G ++S GI +G+ +
Sbjct: 10 FYAGAKAGWASFHD------GLTQFDSKDGGAFGIN------RNSVTYGVFGGYQILNQN 57
Query: 117 STFYRLKEKYFIYGDVVLKAG-------------------YSVDSLL-IYGMGGFGGAYV 156
+ + Y +G V G Y V L +YG G
Sbjct: 58 NFGLAAELGYDYFGRVRGNEGERRAAKHTAHGAHLSLKPSYEVIPNLDVYGKVGVALVRN 117
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNN 215
+ V K + + S++LG G++Y + +++ Y+Y+
Sbjct: 118 DYWTQATV----VKADREKAHNLKPSLLLGAGVEYAILPELAARVEYQYLNRVGNLDKAI 173
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
A + H S G++ F
Sbjct: 174 EKANGAWRNTQYSPDIHSVSAGLSYRF 200
>gi|158536383|gb|ABW72716.1| outer membrane protein A [Escherichia coli]
Length = 354
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 36 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 90
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 91 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 138
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 139 FDGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 188
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 189 GMLSLGVSYRF 199
>gi|197284675|ref|YP_002150547.1| outer membrane protein A [Proteus mirabilis HI4320]
gi|194682162|emb|CAR41796.1| outer membrane protein A [Proteus mirabilis HI4320]
Length = 362
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 60/193 (31%), Gaps = 22/193 (11%)
Query: 57 NYVGLHISRLY--ETHPLADTIN-RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + T D +N G G G+ + G
Sbjct: 28 WYTGGKLGWSQYQSTGNNWDGVNIGNGSTHKDQIGAGAFAGYQY---NQYLGFELGYDWL 84
Query: 114 K---DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
++ K + K Y +D L +Y G G + DS+ +
Sbjct: 85 GRMAYKGSYNNGAFKAQGI-QLTTKLSYPVMDDLDVYTRLG-GMVWRADSTATINATSAG 142
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ + G S V +G +Y + +I+ Y++I N D ++ +
Sbjct: 143 TQKRFSENDTGVSPVFALGTEYAITPNIATRLEYQWI----------NNIGDKGTLNARP 192
Query: 230 NAHIASLGINMHF 242
+ + S+G+ F
Sbjct: 193 DNGMLSVGVAYRF 205
>gi|237706374|ref|ZP_04536855.1| tia invasion determinant [Escherichia sp. 3_2_53FAA]
gi|226899414|gb|EEH85673.1| tia invasion determinant [Escherichia sp. 3_2_53FAA]
gi|323951592|gb|EGB47467.1| tia protein [Escherichia coli H252]
gi|323957516|gb|EGB53235.1| tia protein [Escherichia coli H263]
Length = 248
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 66/232 (28%), Gaps = 34/232 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL---YETHPLADTINRKTYNSLLPN------GLGIELGH 95
Q +G YV Y + G G+ +G+
Sbjct: 17 SAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDFGDDVYKYKGGDKNDTVFGAGLAVGY 76
Query: 96 N-IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG--------------DVVLKAGYSV 140
+ Q + + Y L + G +++ Y
Sbjct: 77 DFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGDGGREDTQNRLSVNTLMVNTYYDF 136
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-------GHGSSVVLGIGLD 190
+ + G G A + + S N + + +G G+
Sbjct: 137 RNSSAFTPWVSVGLGYARIHHKATYTDTSWNKSGEVSDISALHYSGYDNNFAWSIGAGVR 196
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + DI+L SYRY+ S++ +A+ D + + +H G+ +F
Sbjct: 197 YDITPDIALDLSYRYLDAGKSSLSYKDAEGDKYKSEADVKSHDIMFGVTYNF 248
>gi|89054446|ref|YP_509897.1| outer membrane protein, putative [Jannaschia sp. CCS1]
gi|88863995|gb|ABD54872.1| outer membrane protein putative [Jannaschia sp. CCS1]
Length = 207
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 59/226 (26%), Gaps = 24/226 (10%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A+F ++ P + A A V WSG Y G+ +
Sbjct: 4 AVFTGALAVLLTPMAAFAGGYV----APEPVAAAPVVAAPAPVTYDWSGFYGGVQLEYGD 59
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD--STFYRLKEK 125
ADT + G+ G+ L + V G A D
Sbjct: 60 ---VTADTAAGVEAATGDGALYGLFGGYRYDLGNVVVGAELDLNLADIDLDDPTGATIGS 116
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
+ + GY L+YG G A G D +
Sbjct: 117 LDSVHRLGAEVGYDAGPALLYGTVGVAQA---------------TATLGAADLQDNGYFY 161
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G G+DY+V I++ A + + ++
Sbjct: 162 GAGIDYLVTDQITVGAEVLQHEFDDFDGTGLDISATTFGINAAFRF 207
>gi|320192555|gb|EFW67196.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
EC1212]
gi|320202354|gb|EFW76925.1| Outer membrane protein A precursor [Escherichia coli EC4100B]
gi|323165436|gb|EFZ51223.1| outer membrane protein A [Shigella sonnei 53G]
Length = 337
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 19 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 73
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L IY GG +D N
Sbjct: 74 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSN 121
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 122 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 171
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 172 GMLSLGVSYRF 182
>gi|215486075|ref|YP_002328506.1| outer membrane protein A [Escherichia coli O127:H6 str. E2348/69]
gi|215264147|emb|CAS08491.1| outer membrane protein A (3a; II*; G; d) [Escherichia coli O127:H6
str. E2348/69]
Length = 346
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 59/191 (30%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + N T G G G+ Q+ +V G
Sbjct: 28 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 131 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 180
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 181 GMLSLGVSYRF 191
>gi|86359047|ref|YP_470939.1| heat resistant agglutinin 1 protein [Rhizobium etli CFN 42]
gi|86283149|gb|ABC92212.1| probable heat resistant agglutinin 1 protein [Rhizobium etli CFN
42]
Length = 279
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 39/262 (14%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
V + ++ ++ + DL I + +G Y+ + +
Sbjct: 5 LSGVLAAFLIATNAYSADLAPAEPIPEQP--------PEVTVSEATGWYLRGDVGYAFTD 56
Query: 70 HPLADTINRKT------YNSLLPNGLGIELGHNIQLEDFV-------FGINCHTTAAKDD 116
A ++ L + + G Q+ ++ + +
Sbjct: 57 LRGARYFQGSNATEVDFDDADLDDAWTVGGGVGYQINSYLRTDLTFDYLTEADFKGSTSG 116
Query: 117 STFYRLK----------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL----- 161
+ L Y + + + G + + Y G GG+YV +L
Sbjct: 117 QCGFPLVDCTSRDRSSLTAYTLLANAYVDLG-TYGYVTPYVGAGIGGSYVKWKNLRNVAC 175
Query: 162 -EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + + G + L G V +I YRY+ ++ A++
Sbjct: 176 ADDGSFCDDEVTHGGRGNWRFTYALMAGASIDVTCNIKADVGYRYLHIDGGNM-FGYAEN 234
Query: 221 DVERVDRKGNAHIASLGINMHF 242
DR +AH A +G F
Sbjct: 235 GGPGRDRGLSAHEARVGARYLF 256
>gi|218688793|ref|YP_002397005.1| outer membrane protein A [Escherichia coli ED1a]
gi|218426357|emb|CAR07182.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli ED1a]
Length = 346
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 131 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 180
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 181 GMLSLGVSYRF 191
>gi|110644632|ref|YP_672362.1| OmpA family protein [Escherichia coli 536]
gi|191170621|ref|ZP_03032173.1| heat resistant agglutinin 1 [Escherichia coli F11]
gi|110346224|gb|ABG72461.1| OmpA family protein [Escherichia coli 536]
gi|190908845|gb|EDV68432.1| heat resistant agglutinin 1 [Escherichia coli F11]
gi|307556443|gb|ADN49218.1| adhesin/virulence factor Hek [Escherichia coli ABU 83972]
Length = 246
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 34/221 (15%)
Query: 55 SGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHNI--QLE-- 100
SG Y+ + + +G GI G++ Q
Sbjct: 27 SGFYLTGKAGASVVSLSDQRFLSGDEEETSKYKGGDDHDTVFSG-GIAAGYDFYPQFSIP 85
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSVDS---LLIYG 147
+F + D ++ + + ++L A Y + +
Sbjct: 86 VRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWV 145
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSA 201
G G A + + D + GR S LG G+ Y V DI+L
Sbjct: 146 SAGIGYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDL 205
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 206 SYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 246
>gi|251792544|ref|YP_003007270.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
gi|247533937|gb|ACS97183.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
Length = 363
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 66/206 (32%), Gaps = 30/206 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNS-------LLPNGLGIELGHNIQLEDFVFGINCH 109
Y G H L R + + G+ G+ I F +
Sbjct: 30 FYAGAKAGWASVRHGLNQYQYRDESDGAVIGKAKINSEAYGVFGGYQITDN---FAVEAG 86
Query: 110 TTAAKDDST--FYRLKEKYFIYGD-VVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVE 165
F +++ +G + LKA Y ++D+L +Y G V + +
Sbjct: 87 YEFFGRGKVKEFAGGEKRITAHGSSLSLKASYPALDNLDLYARAGAALIRVDYKDTTEGK 146
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHSVNNSNA--- 218
+ +F S V GL+Y + +++L Y+++ SNA
Sbjct: 147 TH-------KFHDLKVSPVFAGGLEYAILPELALRLEYQWVARVGNFGKAERKRSNAYYG 199
Query: 219 --KSDVERVDRKGNAHIASLGINMHF 242
+ V + SLG++ F
Sbjct: 200 PNNYNESDVRYSPDIGSVSLGLSYRF 225
>gi|320179525|gb|EFW54477.1| Outer membrane protein A precursor [Shigella boydii ATCC 9905]
Length = 342
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 19 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 73
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K + K GY + D L +Y G + V ++ KN
Sbjct: 74 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWRADTKAHNNVTGESEKN- 131
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G S V G+++ + +I+ Y++ +N D + + +
Sbjct: 132 ----HDTGVSPVFAGGVEWAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 177
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 178 LLSLGVSYRF 187
>gi|283784777|ref|YP_003364642.1| outer membrane protein A [Citrobacter rodentium ICC168]
gi|282948231|emb|CBG87798.1| outer membrane protein A [Citrobacter rodentium ICC168]
Length = 351
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 59/190 (31%), Gaps = 25/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K + K GY + D L IY G S + A
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWRADTKSHNNLTG-----A 136
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G+++ + DI+ Y++ +N D + + +
Sbjct: 137 STKDHDTGVSPVFAGGIEWAMTRDIATRLEYQW----------TNNIGDANTIGTRPDNG 186
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 187 LLSVGVSYRF 196
>gi|329755842|gb|AEC04318.1| outer membrane protein A [Pasteurella multocida]
gi|329755852|gb|AEC04323.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 59/201 (29%), Gaps = 20/201 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGL-------GIELGHNIQLEDFVFGINCH 109
YVG L + + + G G+ G+ I V
Sbjct: 28 FYVGAKAGWASFHDGLNQAKDLSSAANSGTFGFKRNSVTYGVFGGYQITDNFAVELGYDD 87
Query: 110 TTAAKDDSTF-----YRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK 163
AK + + + + LKA Y V L +Y G
Sbjct: 88 FGRAKLRHSLPELKAATVAKHTNHGAHLSLKASYPVLEGLDVYARVGAALVRSDYKFYND 147
Query: 164 VESDNSK--NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + R S V GL+Y +++L Y+++ + +
Sbjct: 148 AKGEPVLDLQNYKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDAKG---- 203
Query: 222 VERVDRKGNAHIASLGINMHF 242
ERVD + + + G++ F
Sbjct: 204 -ERVDYRPDIGSVTAGLSYRF 223
>gi|110641146|ref|YP_668876.1| outer membrane protein A [Escherichia coli 536]
gi|331657022|ref|ZP_08357984.1| outer membrane protein A [Escherichia coli TA206]
gi|110342738|gb|ABG68975.1| outer membrane protein A [Escherichia coli 536]
gi|222032681|emb|CAP75420.1| Outer membrane protein A [Escherichia coli LF82]
gi|331055270|gb|EGI27279.1| outer membrane protein A [Escherichia coli TA206]
Length = 346
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 131 FDGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 180
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 181 GMLSLGVSYRF 191
>gi|323970364|gb|EGB65633.1| OmpA family protein [Escherichia coli TA007]
Length = 238
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 34/221 (15%)
Query: 55 SGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHNI--QLE-- 100
SG Y+ + + +G GI G++ Q
Sbjct: 19 SGFYLTGKAGASVMSLSDQRFLSGDEEEMSKYKGGDDHDTVFSG-GIAAGYDFYPQFSIP 77
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSVDS---LLIYG 147
+F + D ++ + + ++L A Y + +
Sbjct: 78 VRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWI 137
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSA 201
G G A + + D + GR S LG G+ Y V DI+L
Sbjct: 138 SAGIGYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDL 197
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 198 SYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 238
>gi|254693693|ref|ZP_05155521.1| porin [Brucella abortus bv. 3 str. Tulya]
Length = 81
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 1/77 (1%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D ++ + G G+DY ++ + YRY + + + VE
Sbjct: 6 TDGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVE-A 64
Query: 226 DRKGNAHIASLGINMHF 242
K H LG+ F
Sbjct: 65 RNKFKTHDIRLGVAYKF 81
>gi|257465745|ref|ZP_05630116.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
202]
gi|257451405|gb|EEV25448.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
202]
Length = 212
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 75/208 (36%), Gaps = 29/208 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNG-------LGIELGHNIQLEDFVFGINCH 109
Y G H ++ YN+ G G G+ I L FG+
Sbjct: 10 FYAGAKAGWA-SFHDGIKQLDATHYNNEAGYGINKNSVTYGAFAGYQI-LNQNKFGLATE 67
Query: 110 TTA---------AKDDSTFYRLKEKYFIYGDVVL-KAGYSVDSLL-IYGMGGFGGAYVID 158
+ + K+ +G + K Y V L +YG G
Sbjct: 68 VGYEQFGRVRGHQNTQAGSEKQTFKHSAHGTTIALKPSYEVLPDLDVYGKVGIALVNNRY 127
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH----SVN 214
+++ + +K ++ SS++LG+G++Y + +++ Y+++ + +++
Sbjct: 128 KTVDVQTKEPTKTSRF-----QSSLILGVGVEYAITPELAARVEYQWLNNAGKASQATLD 182
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+SD + D + + S G++ F
Sbjct: 183 RMARQSDAQVTDYRPDISSVSAGLSYRF 210
>gi|312968985|ref|ZP_07783192.1| outer membrane protein A [Escherichia coli 2362-75]
gi|312286387|gb|EFR14300.1| outer membrane protein A [Escherichia coli 2362-75]
Length = 346
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 61/190 (32%), Gaps = 30/190 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + N T G G G+ Q+ +V G
Sbjct: 28 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 117 STFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+K Y G + K GY + D L +Y GG +D N
Sbjct: 83 PYKGSVKNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSNV 131
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 132 YGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 181
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 182 MLSLGVSYRF 191
>gi|240949813|ref|ZP_04754142.1| major outer membrane protein [Actinobacillus minor NM305]
gi|240295730|gb|EER46425.1| major outer membrane protein [Actinobacillus minor NM305]
Length = 372
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/214 (13%), Positives = 67/214 (31%), Gaps = 40/214 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G D + + P + G+ I +G+ +
Sbjct: 26 FYAGAKAGWA----NFRDGFTQFESSQENP---KLNNGYGINKNTVTYGVFGGYQILNQN 78
Query: 117 STFYRLKEKYFIYGDVVLKAGYS--------------------------VDSLLIYGMGG 150
+ + Y +G ++ + +L +YG G
Sbjct: 79 NFGLAAELGYDYFGRARGNTTFAGEDREKVAAKHTAHGAHLSLKPSYEVIPNLDVYGKVG 138
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
V+S K + + S+ LG G++Y + +++ Y+Y+ +
Sbjct: 139 VALIRNDY----FVQSTPVKGKRTKVHTLKPSLTLGAGVEYAILPELAARIEYQYVN-KV 193
Query: 211 HSVNNSNAKSDVERVD--RKGNAHIASLGINMHF 242
+++ + K+D + + + H S G++ F
Sbjct: 194 GNLDKAARKADKQGTNYQFSPDLHSVSAGLSYRF 227
>gi|192359273|ref|YP_001981784.1| outer membrane protein A [Cellvibrio japonicus Ueda107]
gi|190685438|gb|ACE83116.1| outer membrane protein A [Cellvibrio japonicus Ueda107]
Length = 344
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 20/156 (12%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+ YVG+ Y + + + G G+ +G++I + + I
Sbjct: 30 TSIYVGIRAGYSYNEGSCSSNHLKCDKSDT---GYGLFIGYDI---NPRWAIETSFNDIG 83
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D + Y + + Y+ +L +YG G
Sbjct: 84 DTTATYSNAHLDGDLSQIDISVKYAYPIYQNLSLYGKVGAAYWDAKAKGQNV-------- 135
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
F G S +LG GL+ +++ Y+YI
Sbjct: 136 ---SFSDTGVSPLLGAGLELIISEHWKGRIEYQYID 168
>gi|301306585|ref|ZP_07212647.1| hypothetical protein HMPREF9347_05194 [Escherichia coli MS 124-1]
gi|300838203|gb|EFK65963.1| hypothetical protein HMPREF9347_05194 [Escherichia coli MS 124-1]
Length = 235
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 34/221 (15%)
Query: 55 SGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHNI--QLE-- 100
SG Y+ + + +G GI G++ Q
Sbjct: 16 SGFYLTGKAGASVVSLSDQRFLSGDEEETSKYKGGDDHDTVFSG-GIAAGYDFYPQFSIP 74
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSVDS---LLIYG 147
+F + D ++ + + ++L A Y + +
Sbjct: 75 VRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWV 134
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSA 201
G G A + + D + GR S LG G+ Y V DI+L
Sbjct: 135 SAGIGYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDL 194
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 195 SYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 235
>gi|329755840|gb|AEC04317.1| outer membrane protein A [Pasteurella multocida]
gi|329755846|gb|AEC04320.1| outer membrane protein A [Pasteurella multocida]
gi|329755854|gb|AEC04324.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 59/201 (29%), Gaps = 20/201 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGL-------GIELGHNIQLEDFVFGINCH 109
YVG L + + + G G+ G+ I V
Sbjct: 28 FYVGAKAGWASFHDGLNQAKDLSSAANSGTFGFKRNSVTYGVFGGYQITDNFAVELGYDD 87
Query: 110 TTAAKDDSTF-----YRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK 163
AK + + + + LKA Y V L +Y G
Sbjct: 88 FGRAKLRHSLPELKAATVAKHTNHGAHLSLKASYPVLEGLDVYARVGAALVRSDYKFYND 147
Query: 164 VESDNSK--NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + R S V GL+Y +++L Y+++ + +
Sbjct: 148 AKGEPVLDLQNYKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDAKG---- 203
Query: 222 VERVDRKGNAHIASLGINMHF 242
ERVD + + + G++ F
Sbjct: 204 -ERVDYRPDIGSVTAGLSYRF 223
>gi|329755832|gb|AEC04313.1| outer membrane protein A [Pasteurella multocida]
gi|329755834|gb|AEC04314.1| outer membrane protein A [Pasteurella multocida]
gi|329755836|gb|AEC04315.1| outer membrane protein A [Pasteurella multocida]
gi|329755838|gb|AEC04316.1| outer membrane protein A [Pasteurella multocida]
gi|329755844|gb|AEC04319.1| outer membrane protein A [Pasteurella multocida]
gi|329755850|gb|AEC04322.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 59/201 (29%), Gaps = 20/201 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGL-------GIELGHNIQLEDFVFGINCH 109
YVG L + + + G G+ G+ I V
Sbjct: 28 FYVGAKAGWASFHDGLNQAKDLSSAANSGTFGFKRNSVTYGVFGGYQITDNFAVELGYDD 87
Query: 110 TTAAKDDSTF-----YRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK 163
AK + + + + LKA Y V L +Y G
Sbjct: 88 FGRAKLRHSLPELKAATVAKHTNHGAHLSLKASYPVLEGLDVYARVGAALVRSDYKFYND 147
Query: 164 VESDNSK--NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + R S V GL+Y +++L Y+++ + +
Sbjct: 148 AKGEPVLDLQNYKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDAKG---- 203
Query: 222 VERVDRKGNAHIASLGINMHF 242
ERVD + + + G++ F
Sbjct: 204 -ERVDYRPDIGSVTAGLSYRF 223
>gi|260431608|ref|ZP_05785579.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415436|gb|EEX08695.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 179
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 56/194 (28%), Gaps = 40/194 (20%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
G W+G Y G I L+ ++ LG++ L D+V G
Sbjct: 25 SSGDWTGFYGGAQIGYADIDTNLSGVDGDGVIGGII-------LGYDYDLGDWVVGGGFD 77
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDN 168
+ D + + +AGY V+ L+YG+ G+
Sbjct: 78 YDWSDIDLSGA---ATVEDVWRLKARAGYKVNPQGLLYGVAGYA---------------- 118
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
A G +G G + +V ++S++ Y D
Sbjct: 119 --EAGTDTLGSDDGWFVGAGYEQIVAPNVSIAGEVLYHEFD-----------DFNSTGVD 165
Query: 229 GNAHIASLGINMHF 242
+A + F
Sbjct: 166 VDATTIQVRAAYRF 179
>gi|183601209|ref|ZP_02962702.1| hypothetical protein PROSTU_04842 [Providencia stuartii ATCC 25827]
gi|188019557|gb|EDU57597.1| hypothetical protein PROSTU_04842 [Providencia stuartii ATCC 25827]
Length = 244
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/232 (12%), Positives = 68/232 (29%), Gaps = 34/232 (14%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRL-----------YETHPLADTINRKTYNSLLP-NGLG 90
++ + +G YV + D + N G G
Sbjct: 15 SLPAFANTDDSKTGLYVTGKMGASIEQMSGQQFVYSGYADAGDNGTKNGDNHRTGVFGGG 74
Query: 91 IELGHNI--QLEDFVFGINCHTTAAKDDSTFYRLKEKYFI-------------YGDVVLK 135
+ LG++ Q + A ++ Y ++++ +++
Sbjct: 75 LALGYDFSNQFD-IPVRAELEFMARDKANSTYNIRDRVRNGVHQTRDIKNQIKLNTLMVN 133
Query: 136 AGYSVDS---LLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
Y + + Y G + + + S + + + +G G++
Sbjct: 134 GYYDIKNSSDFTPYISVGLGYAAVDFKTTRADAYTPGLSLHDTHTHTANNFAWSVGAGVN 193
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y +N D + SYRY+ + + + K A+ LG+ F
Sbjct: 194 YAINDDWDMGLSYRYLDAGKADITTAVGDGE-NTSKIKVKANDIMLGLTYRF 244
>gi|45758069|gb|AAO85793.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
gi|45758071|gb|AAO85794.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
Length = 367
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 66/203 (32%), Gaps = 22/203 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN----GLGIELGHNI-QLEDFVFGINCHTT 111
Y G H + K N G+ G+ I +F
Sbjct: 26 FYAGAKAGWA-SFHDGLTQFDHKDGGEFGINRNSVTYGVFGGYQILNQNNFGLATELGYD 84
Query: 112 AAK--------DDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSL 161
+ + K+ +G + LK Y V L +YG G
Sbjct: 85 YFGRVRGNKTFEGENSDKRAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDY--- 141
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--HHIHSVNNSNAK 219
V+ + +K+++ + S++LG GL+Y + +++ Y+Y+ ++ A
Sbjct: 142 -YVQQNVAKDSRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAARKTAN 200
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ + H S G++ F
Sbjct: 201 IEGTNFQYSPDIHSVSAGLSYRF 223
>gi|254513426|ref|ZP_05125491.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221532430|gb|EEE35426.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 185
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 66/209 (31%), Gaps = 31/209 (14%)
Query: 36 LFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH 95
V W+G YVG + ++ ++ + LG+ G+
Sbjct: 6 KTALLALAVALPTHALADWNGAYVGFSLGTNTTNELSSNVTG--SFEADSSTALGVFGGY 63
Query: 96 NIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG--DVVLKAGYSVDSLLIYGMGGFGG 153
+Q +DFVFG D +E F +G D+ +AGY V+++L YG+ GF
Sbjct: 64 TVQNDDFVFGGEVAFLRTPDLEFEVDGREVTFDFGIFDLKGRAGYVVNNILFYGVAGFSR 123
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
H + G+G DY + + + Y
Sbjct: 124 ISEQ-----------------ETGDHANGFNFGVGADYNLGNNFVIGIEYL--------- 157
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
A + D + +L F
Sbjct: 158 -ARRAAFEDGIFDVDLDLDTLALRAAFRF 185
>gi|332093647|gb|EGI98705.1| outer membrane protein A [Shigella boydii 3594-74]
Length = 346
Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNTYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L IY GG +D N
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 131 VYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 180
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 181 GMLSLGVSYRF 191
>gi|331662369|ref|ZP_08363292.1| outer membrane protein A [Escherichia coli TA143]
gi|331682461|ref|ZP_08383080.1| outer membrane protein A [Escherichia coli H299]
gi|331060791|gb|EGI32755.1| outer membrane protein A [Escherichia coli TA143]
gi|331080092|gb|EGI51271.1| outer membrane protein A [Escherichia coli H299]
Length = 346
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKN 171
+ K + K GY + D L +Y GG +D N
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVWR-----------ADTKSN 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 131 FDGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDN 180
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 181 GMLSLGVSYRF 191
>gi|463912|gb|AAC13752.1| heat resistant agglutinin 1 [Escherichia coli]
Length = 250
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 67/232 (28%), Gaps = 35/232 (15%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELG 94
Q +G YV + + +G GI G
Sbjct: 20 STQALADESKTGFYVTGKAGASVMSLADQRFLSGNGEETSKYKGGDGHDTVFSG-GIAAG 78
Query: 95 HNI--QLE-------DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSV 140
++ Q +F + D ++ + + ++L A Y
Sbjct: 79 YDFYPQFSIPVRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDF 138
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF-------DGHGSSVVLGIGLD 190
+ + G G A I + + + + LG G+
Sbjct: 139 RNDSAFTPWVSAGIGYAKEIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSLGAGVR 198
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y V DI+L SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 199 YDVTPDIALDLSYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 250
>gi|291616946|ref|YP_003519688.1| OmpA [Pantoea ananatis LMG 20103]
gi|291151976|gb|ADD76560.1| OmpA [Pantoea ananatis LMG 20103]
Length = 367
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 59/193 (30%), Gaps = 26/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + H N N + G G G+ Q + G
Sbjct: 38 WYTGAKLGW-SQYHDTGYYGNGYQNNDGPTHESQLGAGAFAGY--QANPY-LGFELGYDW 93
Query: 113 AK-DDSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ ++ + G + K Y + D L IY G +
Sbjct: 94 LGRMPNKGNQVNGAFKAQGIQLAAKLSYPIADDLDIYTRLGGMVWRADSTQQNLATGTRI 153
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ G S + +G++Y + + + Y+++ N D + V +
Sbjct: 154 SD-----HDTGVSPLAAVGVEYALTKNWATRLDYQWV----------NNIGDAQTVGARP 198
Query: 230 NAHIASLGINMHF 242
+ + SLG++ F
Sbjct: 199 DNGMLSLGVSYRF 211
>gi|66934588|gb|AAY58303.1| hemin-binding protein [Bartonella vinsonii subsp. berkhoffii]
Length = 182
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 50/184 (27%), Gaps = 51/184 (27%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
++++ + + A D+ +P ++ + W+G Y+G + +
Sbjct: 3 VIALISTSAAQAADIVVPHEV----VSPRVTPIVSPSTFSWTGFYLGGQVGNFSSKVEIT 58
Query: 74 D------TINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAK------------ 114
D + G+ G NI L + + G+ A
Sbjct: 59 DSGKKNEFFGKDQTPKPSGFMGGVYTGSNIDLGNNLILGVETDAVWADRGDTKTLSTKEL 118
Query: 115 ---------------------------DDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIY 146
D+ Y K G + G++ + ++ Y
Sbjct: 119 EGDDLEDFNNTFTDAGIKLGDDEKFVAGDTGSYSFTYKEKWSGATRARIGFAAANCIMPY 178
Query: 147 GMGG 150
GG
Sbjct: 179 VAGG 182
>gi|298292960|ref|YP_003694899.1| porin opacity type [Starkeya novella DSM 506]
gi|296929471|gb|ADH90280.1| porin opacity type [Starkeya novella DSM 506]
Length = 222
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/236 (16%), Positives = 77/236 (32%), Gaps = 29/236 (12%)
Query: 13 VFLSIVVPN-HSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
+ +++ P + A D+ L D+ E ++ + + SG Y+ + ++ P
Sbjct: 5 LLAAVMFPAVTAKAADVGLDMGADMSAE---DLLAKAPKLEETSGWYLRGDVGYVFNELP 61
Query: 72 ----LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK-- 125
+ + GI G + + + + K D L
Sbjct: 62 DWAEVPIFPVILSPELDDAWMFGIGAGVRL-NDVWRIDVTADYR-TKADYAALGLSADYS 119
Query: 126 -YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
I +V G + +L Y G GG Y+ + + + G DG G +
Sbjct: 120 TTTILANVYADLG-TWSNLTPYVGAGIGGGYI-----SASDIEALGVSVGDIDGWGFAWA 173
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
L G+ + + L YRY+ + ++ +AH +G+
Sbjct: 174 LMGGVAVNLAPNWQLDLGYRYVNLDDVT----------NTLNFHQSAHEVRVGVRY 219
>gi|332716437|ref|YP_004443903.1| outer surface protein [Agrobacterium sp. H13-3]
gi|325063122|gb|ADY66812.1| outer surface protein [Agrobacterium sp. H13-3]
Length = 281
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 63/262 (24%), Gaps = 36/262 (13%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+ ++ + A DLY + VE + + SG Y+ + +
Sbjct: 5 LAGILAVLMTGTSAFAADLYQAEPAPAY------VEAPEVQITQASGWYLRGDVGYSFNK 58
Query: 70 HPLADTINRKTYNSLL-------PNGLGIELGHNIQLED-------FVFGINCHTTAAKD 115
A+ L + + G Q + F + +
Sbjct: 59 LRGANYYQGGPGGYLADFDTANVKDSYIVGAGVGYQFNNYFRSDVTFDYMGKSDFRGSTI 118
Query: 116 DSTFY-RLKEKYFIYGDVVLKAGYS--------VDSLLIYGMGGFGGAYVI------DSS 160
+ + + Y GG GG+YV S
Sbjct: 119 GGCGSVPGPCVSADLSSLRAYTLMANAYVDLGTYGRITPYVGGGIGGSYVKWDKLRNTSC 178
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ G + L G V ++ YR+ + + A
Sbjct: 179 STNGLGCDPTTEHGGRGKWRFAYALMAGASIDVTCNLKADVGYRFRQINKGDM-FDFANG 237
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D+ +H +G F
Sbjct: 238 GGPGRDKGLYSHEVRVGGRYVF 259
>gi|27382516|ref|NP_774045.1| hypothetical protein bll7405 [Bradyrhizobium japonicum USDA 110]
gi|27355688|dbj|BAC52670.1| bll7405 [Bradyrhizobium japonicum USDA 110]
Length = 298
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/269 (10%), Positives = 61/269 (22%), Gaps = 93/269 (34%)
Query: 54 WSGNYVGLHISRLYETHPLADTI--------------------NRKTYNSLLPNGLGIEL 93
W G YVG++ + + ++ + + G +
Sbjct: 43 WDGAYVGVNGGYTADATDFSQSVVGLTNFIFRDSVLQQPTANWSLMNKTNTQSTNFGAFV 102
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKE----------------------------- 124
G N Q D + G+ + + ST
Sbjct: 103 GRNWQWYDAILGLEGTYSYFNNLSTLTSGTNSLTIVNPPGDAHAANVTDNYDVTLTGTAA 162
Query: 125 -KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK-------------------- 163
K + + G+ + Y G + S
Sbjct: 163 AKVKDMITLRGRVGWDGGDFMPYAFMGAAVGRMDVSRSVTSIVDLRQDVTNTIVVGGATL 222
Query: 164 ----------VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
V + + + R + G+G++Y + + Y Y+
Sbjct: 223 TTTTFGAPQAVPAQSQSQTQRRTNAFAVGWTAGLGVEYCIWDGLFARVEYEYVKFS---- 278
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + A +G+ F
Sbjct: 279 ---------PVMNTSVTLNNARVGLGYKF 298
>gi|126735844|ref|ZP_01751589.1| outer membrane protein, putative [Roseobacter sp. CCS2]
gi|126715031|gb|EBA11897.1| outer membrane protein, putative [Roseobacter sp. CCS2]
Length = 200
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 55/206 (26%), Gaps = 28/206 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL---EDFVFGINCHT 110
WS Y +S P + + + G +G ++ + VF +
Sbjct: 6 WSEFYAFGQVSAPIGVQPEYTYVPVDSTTEVPMEGAAAVIGIGYEVARTGNVVFAVEADI 65
Query: 111 TAAKDDST--------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ DS + + GY + Y GG A
Sbjct: 66 SFGNYDSGQVLVDTTPCITNAPDEACRAEVSAIATGRALIGYKQGAFTPYITGGVAIAR- 124
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++ + FD + G+G+ Y +N +L A +
Sbjct: 125 ---ASGHADTGACGGSDCDFDEALTGWTAGLGIIYDINETFALKA-------DLLQYELE 174
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + + V +G F
Sbjct: 175 DPEFGSDSVTGSFRFGEIRIGAVYRF 200
>gi|242240116|ref|YP_002988297.1| outer membrane protein A [Dickeya dadantii Ech703]
gi|242132173|gb|ACS86475.1| OmpA domain protein transmembrane region-containing protein
[Dickeya dadantii Ech703]
Length = 354
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + + +T N N G G+ G+ Q + G
Sbjct: 26 WYAGGKLGWSQFHDTGLNGSGYQTTNDAQENQLGAGVFGGY--QANPY-LGFEMGYDWLG 82
Query: 115 DDSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + G + K Y + D L +Y G + + +S + +
Sbjct: 83 RMKYTGVNRGNFKAQGVQLAAKLSYPIVDDLDVYTRLG--------GFVWRADSHDDVSG 134
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
D G S + +G++Y + + + Y+++ N D V + +
Sbjct: 135 NSGHD-TGVSPLAAVGVEYAITKNWATRLDYQWV----------NNIGDASTVGGRPDNG 183
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 184 LLSVGVSYRF 193
>gi|327193460|gb|EGE60356.1| putative heat resistant agglutinin 1 protein [Rhizobium etli
CNPAF512]
Length = 278
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 74/262 (28%), Gaps = 39/262 (14%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+F ++++ ++ + DL I + +G Y+ + +
Sbjct: 5 LSGIFAALLIATNAYSADLAPAEPIPEQP--------PEVAVTEATGWYLRGDVGYAFTD 56
Query: 70 HPLADTINRKTYNSLLPNGLG------IELGHNIQLEDFV-------FGINCHTTAAKDD 116
A N + + I G Q+ ++ + +
Sbjct: 57 LRGARYFQGSNANEVDFDDADLDDAWTIGGGVGYQINSYLRTDLTFDYLTQADFRGSTVG 116
Query: 117 STFYRLK----------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL----- 161
+ L Y + + + G + + Y G GG+YV +L
Sbjct: 117 QCGFPLVDCTSTDRSSLTAYTLLANAYVDLG-TYGYVTPYVGAGIGGSYVKWKNLRNVAC 175
Query: 162 -EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + + G + L G V + YRY+ ++ A +
Sbjct: 176 ADDGSFCDDEVTHGGKGNWRFTYALMAGASVDVTCNFKADVGYRYLHIDGGNM-FGYADN 234
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D+ +AH +G F
Sbjct: 235 GGPGRDKGLSAHEVRVGGRYLF 256
>gi|329755848|gb|AEC04321.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 58/201 (28%), Gaps = 20/201 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGL-------GIELGHNIQLEDFVFGINCH 109
YVG L + + + G G+ G+ I V
Sbjct: 28 FYVGAKAGWASFHDGLNQAKDLSSAANSGTFGFKRNSVTYGVFGGYQITDNFAVELGYDD 87
Query: 110 TTAAKDDSTF-----YRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK 163
AK + + + LKA Y V L +Y G
Sbjct: 88 FGRAKLRHFLPELKAATVAKHTNHGAHLSLKASYPVLEGLDVYARVGAALVRSDYKFYND 147
Query: 164 VESDNSK--NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + R S V GL+Y +++L Y+++ + +
Sbjct: 148 AKGEPVLDLQNYKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDAKG---- 203
Query: 222 VERVDRKGNAHIASLGINMHF 242
ERVD + + + G++ F
Sbjct: 204 -ERVDYRPDIGSVTAGLSYRF 223
>gi|294635647|ref|ZP_06714122.1| outer membrane protein A [Edwardsiella tarda ATCC 23685]
gi|291090994|gb|EFE23555.1| outer membrane protein A [Edwardsiella tarda ATCC 23685]
Length = 356
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 23/188 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + H + ++ PN LG Q + G
Sbjct: 34 WYVGGKLGWS---HYIGNSFENMDSTKSHPNQLGAGAFFGYQANPY-LGFEMGYDWLGRM 89
Query: 117 STFYRLKEKYFIYG-DVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ K+ G + K Y +D+L +Y G +
Sbjct: 90 GYTGDVNGKFKAQGIQLAAKLSYPLMDNLDVYTRLG-------GMVWRADAHASDATDYV 142
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S + IG++Y +N D + Y+Y+ N + + + +
Sbjct: 143 SGHDTGVSPLAAIGVEYALNKDWATRLDYQYV----------NKIGTSSQTGARPDNTLL 192
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 193 SLGVVYRF 200
>gi|209886273|ref|YP_002290130.1| hypothetical protein OCAR_7161 [Oligotropha carboxidovorans OM5]
gi|209874469|gb|ACI94265.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 277
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 65/258 (25%), Gaps = 78/258 (30%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG----------------- 90
W G YVG + A++ L +
Sbjct: 35 GTGVVNWQGFYVGGQAAYGSADMNFANSTGSLISRQLQYASIEQSAQVSQWPILGRESQH 94
Query: 91 -----IELGHNIQLEDFVFGINCHTTAAKDDSTFYRL----------------------- 122
+G+N Q +D V G+ T + +
Sbjct: 95 GHGFGGFVGYNSQWDDVVLGVEASYTHGNFNGSASGSLNYVFADIITTPAPGYTDDITYS 154
Query: 123 ---KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE---------------KV 164
+ K G + ++AGY+ ++ L Y GG + V
Sbjct: 155 GTSRFKITDTGSLRVRAGYAWNNFLPYVFGGVSLGRADVARTAVISGTQTNPGAAPPNDV 214
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ ++ + G+G+D M+ ++ + Y+ +
Sbjct: 215 LNVYLAKSEAQGGRFIYGYAAGLGVDMMLFGNLFGRVEWEYLKYAG-------------- 260
Query: 225 VDRKGNAHIASLGINMHF 242
+ + +G+ F
Sbjct: 261 -PIDTSINTGRVGLGYKF 277
>gi|308186299|ref|YP_003930430.1| Outer membrane protein A precursor [Pantoea vagans C9-1]
gi|308056809|gb|ADO08981.1| Outer membrane protein A precursor [Pantoea vagans C9-1]
Length = 356
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 56/194 (28%), Gaps = 29/194 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + N G G +G+ Q + G
Sbjct: 28 WYTGAKLGWSQYHDTGYYGNGYENNNGPTHESQLGAGAFVGY--QANPY-LGFELGYDWL 84
Query: 114 K---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDN 168
+ T K + K Y + D L +Y GG N
Sbjct: 85 GRMPNKGTVTNGAFKAQGV-QLAAKLSYPIYDDLDVYTRLGGMVW-------RADATQTN 136
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ G S + +G++Y + + + Y+++ N D + V +
Sbjct: 137 PTTGRISDHDTGVSPLAAVGVEYALTKNWATRLDYQWV----------NNIGDAQTVGTR 186
Query: 229 GNAHIASLGINMHF 242
+ + S+G++ F
Sbjct: 187 PDNGMLSVGVSYRF 200
>gi|261345491|ref|ZP_05973135.1| adhesin/virulence factor Hek [Providencia rustigianii DSM 4541]
gi|282566541|gb|EFB72076.1| adhesin/virulence factor Hek [Providencia rustigianii DSM 4541]
Length = 244
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 68/232 (29%), Gaps = 34/232 (14%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRL-----------YETHPLADTINRKTYNSLLP-NGLG 90
++ + +G YV + D + + G G
Sbjct: 15 SLPAFANTDDSKTGLYVTGKMGASIVQMSGQQFVYSGYADAGDNGTKNGDSHRTGVFGGG 74
Query: 91 IELGHNI--QLEDFVFGINCHTTAAKDDSTFYRLKEKYFI-------------YGDVVLK 135
+ LG++ Q + A ++ Y ++++ +++
Sbjct: 75 LALGYDFSNQFD-IPVRAELEFMARDKANSTYNIRDRVRNGVHQTRDIKNQIKLNTLMVN 133
Query: 136 AGYSV---DSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
Y + + Y G + + + S + + + +G G++
Sbjct: 134 GYYDIKNSSNFTPYISVGLGYAAVDFKTTRADSYTPGLSLHDTHTHTANNFAWSVGAGVN 193
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y +N D + SYRY+ + + + K A+ LG+ F
Sbjct: 194 YAINDDWDMGLSYRYLDAGKADITTAVGDGE-NTSKIKVKANDIMLGLTYRF 244
>gi|310815861|ref|YP_003963825.1| putative outer-membrane immunogenic protein precursor
[Ketogulonicigenium vulgare Y25]
gi|308754596|gb|ADO42525.1| putative outer-membrane immunogenic protein precursor
[Ketogulonicigenium vulgare Y25]
Length = 220
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 35/202 (17%)
Query: 55 SGNYVGLHISRLYETHPLADTINR------KTYNSLLPNGLGIE--LGHNIQLEDFVFGI 106
SG YVG ++R + + T + P+GLG+ G++ + + +FG+
Sbjct: 40 SGGYVGFGLNRDSGSIDMNGETGDQAQQLLGTRSLGEPSGLGLNLRAGYDWRTGNTIFGV 99
Query: 107 NCHTTAAKDDSTFYRLKEKYFI---YGDVVL---KAGYSVDSLLIYGMGGFGGAYVIDSS 160
+ +G + GY + +++Y G+ V +
Sbjct: 100 WGEIAQSWAKDDVVIPAVSDTWSVGFGTSTAAMLRLGYDMGGVMVYSNAGYRWTDVELET 159
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
G + + G+G++ ++ +S + + K
Sbjct: 160 F-----------SGAYSDRSGGISYGVGIETEFSHHMSGYLE----------FHRNTGKV 198
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D+E + + + +LG+N F
Sbjct: 199 DIEGLTADLSLNTFTLGVNYKF 220
>gi|307944552|ref|ZP_07659892.1| putative heat resistant agglutinin 1 protein [Roseibium sp.
TrichSKD4]
gi|307772301|gb|EFO31522.1| putative heat resistant agglutinin 1 protein [Roseibium sp.
TrichSKD4]
Length = 272
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 70/251 (27%), Gaps = 22/251 (8%)
Query: 13 VFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR---LYET 69
+FL + + AV DL +V + G Y+ I T
Sbjct: 3 MFLKRLSLAGAAAVMSTAAIAADLPAPIIEHVPEIPAPAAVGGGFYLRGDIGYKIYGDPT 62
Query: 70 HPLADTINRKTY----NSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK 125
+DT + +G+ +G+ + F + AA + +
Sbjct: 63 QEYSDTTLGDIRYDRESLDDTWMIGVGVGYKF-NKYFRTDLTIDYEAAAEAVGYVECAHP 121
Query: 126 YFIYGDVVLKA--------GY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
GY + + + Y G G AYV S
Sbjct: 122 CGSTSRDTADIDVWTVMLNGYVDLATWNKITPYVGAGIGAAYVNTSDFYSGSPTTPYQFD 181
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH--IHSVNNSNAKSDVERVDRKGNA 231
G + L G Y V + ++ A YRY ++ ++ D + A
Sbjct: 182 GSNGEWNFAWALMAGASYAVTNNFAIDAGYRYKDLGEAKTTILHNVGSKDSRMEYKDLTA 241
Query: 232 HIASLGINMHF 242
H LG F
Sbjct: 242 HEFRLGARYTF 252
>gi|463913|gb|AAC13753.1| heat resistant agglutinin 1 [Escherichia coli]
Length = 247
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 67/232 (28%), Gaps = 35/232 (15%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELG 94
Q +G YV + + +G GI G
Sbjct: 17 STQALADESKTGFYVTGKAGASVMSLADQRFLSGNGEETSKYKGGDGHDTVFSG-GIAAG 75
Query: 95 HNI--QLE-------DFVFGINCHTTAAKDDSTFYRLKEKYFI-----YGDVVLKAGYSV 140
++ Q +F + D ++ + + ++L A Y
Sbjct: 76 YDFYPQFSIPVRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDF 135
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF-------DGHGSSVVLGIGLD 190
+ + G G A I + + + + LG G+
Sbjct: 136 RNDSAFTPWVSAGIGYAKEIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSLGAGVR 195
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y V DI+L SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 196 YDVTPDIALDLSYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 247
>gi|307261911|ref|ZP_07543571.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306868382|gb|EFN00199.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 339
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 32/208 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + H N K N N LG N +G+ +
Sbjct: 26 FYAGAKVGWA-TFHEGVRQFNDKYSNDARYNQDTTNLGIN--RNSVTYGVFGGYQILNQN 82
Query: 117 STFYRLKEKYFIYGDVVLKAG-------------------YSVDSLL-IYGMGGFGGAYV 156
+ + Y YG V G Y V L +YG G
Sbjct: 83 NFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVAVVRN 142
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+K E + +S +LG G++Y + +++ Y+Y+ ++N +
Sbjct: 143 DYKEYDKEE------PTEKTHKLKASTILGAGVEYAILPELAARIEYQYLN-KAGNLNKA 195
Query: 217 NAKSDVERVDRKG--NAHIASLGINMHF 242
+S + VD + + H + G++ F
Sbjct: 196 LVRSGTQDVDFQYAPDIHSVTAGLSYRF 223
>gi|254501451|ref|ZP_05113602.1| Porin subfamily [Labrenzia alexandrii DFL-11]
gi|222437522|gb|EEE44201.1| Porin subfamily [Labrenzia alexandrii DFL-11]
Length = 264
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/256 (14%), Positives = 66/256 (25%), Gaps = 34/256 (13%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR---- 65
+ ++V+ A DL P +E+ G Y+ I
Sbjct: 1 MSLTGFAVVLSTAGFAADLPTP-----------VIEHVPVAPAAVGGFYLRGDIGYKVYG 49
Query: 66 ---LYETHPLADTINRKTYNSLLPNGLGIELGHNIQL---EDFVFGINCHTTAAKDDSTF 119
+ + + +G +G+ D TA
Sbjct: 50 DPSGSFNDSAIGGLRYERESLDNTWMIGAGVGYQFNRYFRSDVTVDYEAKATATGYAPCG 109
Query: 120 YRLKEKYFIYGDVVLKAGY----------SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
F + + + + Y G G +YV S+ + D +
Sbjct: 110 GCAAAGQFSTEKADIDVWTVMLNGYVDLATWNRITPYVGAGIGASYVSASNKTSLNPDGT 169
Query: 170 KNAK-GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR- 227
++ G + L G +Y V + S+ A YRY E +
Sbjct: 170 FSSYDGSNGDWNFAWALMAGAEYAVTPNWSIDAGYRYKDLGEAKTVKLYNVGTGESREVW 229
Query: 228 -KGNAHIASLGINMHF 242
AH +G F
Sbjct: 230 EDLTAHEFRIGARYTF 245
>gi|299773283|gb|ADJ38716.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 19/200 (9%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGPALVRNDYKRST 146
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ +S+VLG G++Y + +++L Y+++ + + ++
Sbjct: 147 ----QTGGAPPQKAHNLQTSLVLGAGVEYAILPELALRVEYQWLSNVGNFTKAEAKENRR 202
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 203 ATYNYSPDSHSVTAGISYRF 222
>gi|161347191|gb|ABX65299.1| 31 kDa bacteriophage-associated heme binding protein [Bartonella
vinsonii subsp. berkhoffii]
Length = 182
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 51/184 (27%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
++++ + + A D+ +P ++ + W+G Y+G + +
Sbjct: 3 VIALISTSTAQAADIVVPHEV----VSPRVTPIVSPSTFSWTGFYLGGQVGNFSSKVKIT 58
Query: 74 D------TINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAK------------ 114
D + GI G NI+L + + G+ A
Sbjct: 59 DSGKKNEFFGKDQTPKPSGFMGGIYTGSNIELGNNLILGVETDAVWADRGDTKTLSTKEL 118
Query: 115 ---------------------------DDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIY 146
D+ Y K G + G++ + ++ Y
Sbjct: 119 EGDDLEDFNNTFTDAGIKLGDDEKFVAGDTGSYSFTYKEKWSGATRARIGFAAANCIMPY 178
Query: 147 GMGG 150
GG
Sbjct: 179 FAGG 182
>gi|241206177|ref|YP_002977273.1| surface antigen msp4 family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860067|gb|ACS57734.1| surface antigen msp4 family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 278
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 77/262 (29%), Gaps = 39/262 (14%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+F ++++ ++ + DL I + +G Y+ + +
Sbjct: 5 LSGIFAALLIATNAYSADLAPAEPIPEQP--------PEVTVTEATGWYLRGDVGYAFTD 56
Query: 70 HPLADTINRKT------YNSLLPNGLGIELGHNIQLEDFV-------FGINCHTTAAKDD 116
A ++ L + + G Q+ ++ + +
Sbjct: 57 LRGARYFQGSNATEVDFDDADLDDAWTVGGGVGYQINSYLRTDLTFDYLTQADFKGSTVG 116
Query: 117 STFYRLK----------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL----- 161
+ L Y + + + G + + Y G GG+YV +L
Sbjct: 117 QCGFPLVDCTSSDRSSLTAYTLLANAYVDLG-TYGYVTPYVGAGIGGSYVKWKNLRNVAC 175
Query: 162 -EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + + G + L G V +I YRY+ ++ A++
Sbjct: 176 ADDGSFCDDQVTHGGKGNWRFTYALMAGASIDVTCNIKADVGYRYLHIDGGNM-FGYAEN 234
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D+ AH A +G F
Sbjct: 235 GGPGRDKGLTAHEARVGARYLF 256
>gi|218680856|ref|ZP_03528753.1| surface antigen msp4 family protein [Rhizobium etli CIAT 894]
Length = 274
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 75/262 (28%), Gaps = 39/262 (14%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+F ++++ ++ + DL I + +G Y+ + +
Sbjct: 1 MSGIFAALLIATNAYSADLAPAEPIPEQP--------PEVTVTEATGWYLRGDVGYAFTD 52
Query: 70 HPLADTINRKTYNSLLPN------GLGIELGHNIQLEDFV-------FGINCHTTAAKDD 116
A + + + G Q+ ++ + +
Sbjct: 53 LRGARYFQGSNATEVNFDDADLDDAWTVGGGVGYQINSYLRTDLTLDYLTQADFKGSTSG 112
Query: 117 STFYRLK----------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL----- 161
+ L Y + + + G + + Y G GG+YV +L
Sbjct: 113 QCGFPLVDCTSSDRSSLTAYTLLANAYVDLG-TYGYVTPYVGAGIGGSYVKWKNLRNVAC 171
Query: 162 -EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + + G + L G V ++ YRY+ ++ A++
Sbjct: 172 ADDGSFCDDEVNHGGKGNWRFTYALMAGASIDVTCNVKADVGYRYLHIDGGNM-FGYAEN 230
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D+ N H A +G F
Sbjct: 231 GGPGRDKGLNVHEARVGARYLF 252
>gi|29654705|ref|NP_820397.1| hypothetical exported membrane spanning protein [Coxiella burnetii
RSA 493]
gi|81628755|sp|Q83BT9|Y1413_COXBU RecName: Full=Uncharacterized protein CBU_1413; Flags: Precursor
gi|29541973|gb|AAO90911.1| hypothetical exported membrane spanning protein [Coxiella burnetii
RSA 493]
Length = 259
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/209 (11%), Positives = 65/209 (31%), Gaps = 31/209 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD 116
Y G ++ + ++ G +G + + G+ ++
Sbjct: 56 YQGTYLGGSFTVPIGSNV-------HQNGYTAGGHIGLRYYFSNPWFLGLEFAAMGNSEN 108
Query: 117 STFY---------------RLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVID-- 158
+T + + D+ + G ++ +Y GG A +
Sbjct: 109 ATTAESVLAPSPDDLIFNLVNQFRIKSNLDLTAQLGVNITPQTRVYIKGGASYARIRHIL 168
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN--- 215
+ + + + + ++G GL Y + Y Y + +++
Sbjct: 169 TVFNPATLTPTISLQRTTHKNRWGFLVGFGLGYDFCPWFGIFTEYNYYDYGRVGLDSLSN 228
Query: 216 --SNAKSDVERVDRKGNAHIASLGINMHF 242
N +D + + +A+ LG+N++F
Sbjct: 229 IRPNNGADTYHQNVRVHAYSVLLGVNLNF 257
>gi|329755864|gb|AEC04329.1| outer membrane protein A [Pasteurella multocida]
Length = 351
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 59/197 (29%), Gaps = 19/197 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
YVG L + ++ G+ G+ I V
Sbjct: 28 FYVGAKAGWASFHDGLNQFKDLNDEDATFGFKRNSVTYGVFGGYQITDTFAVELGYDDFG 87
Query: 112 AAKDDSTFYRLKEK-----YFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVE 165
AK K + + LKA Y V D L +Y G + E
Sbjct: 88 RAKLRVAEKDQKARDLAKHTNHGAHLSLKASYPVLDGLDVYARVGAALVRSDYKLYGESE 147
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
R S V GL+Y +++L Y+++ + + + ERV
Sbjct: 148 D---LEEFKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDANG-----ERV 199
Query: 226 DRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 200 DYRPDIGSVTAGLSYRF 216
>gi|66934583|gb|AAY58302.1| hemin-binding protein [Bartonella vinsonii subsp. berkhoffii]
Length = 182
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 51/184 (27%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
++++ + + A D+ +P ++ + W+G Y+G + +
Sbjct: 3 VIALISTSTAQAADIVVPHEV----VSPRVTPIVSPSTFSWTGFYLGGQVGNFSSKVEIT 58
Query: 74 D------TINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAK------------ 114
D + GI G NI+L + + G+ A
Sbjct: 59 DSGKKNEFFGKDQTPKPSGFMGGIYTGSNIELGNNLILGVETDAVWADRGDTKTLSTKEL 118
Query: 115 ---------------------------DDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIY 146
D+ Y K G + G++ + ++ Y
Sbjct: 119 EGDDLEDFNNTFTDAGIKLGGDEKFVVGDTGSYSFTYKEKWSGATRARIGFAAANCIMPY 178
Query: 147 GMGG 150
GG
Sbjct: 179 VAGG 182
>gi|284008859|emb|CBA75661.1| outer membrane adhesin [Arsenophonus nasoniae]
Length = 245
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 34/222 (15%)
Query: 55 SGNYVGLHISR-------------LYETHPLADTINRKTYNSLLPNGLGIELGHNIQ-LE 100
+G YV + + + + G GI LG+N + +
Sbjct: 24 TGLYVTGKVGGSVVQSTKSTGSISAISAAEKRNMSGKLDDITSGAFGGGIALGYNFKPMF 83
Query: 101 DFVFGINCHTTA---------AKDDSTFYRLKEKYFI---YGDVVLKAGYSVDS---LLI 145
+ TA + L + +++ A Y ++
Sbjct: 84 QLPVRVELDFTARSNLKKNGSNGAEIAGQPLDIEMKDKIQINTLMVNAMYDFENSSQFTP 143
Query: 146 YGMGG--FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
Y + G ++ N+K G+ + + +G G+ Y +N +++L SY
Sbjct: 144 YVLAGMGVAQNNRTTDISADYQNKNAKLLSGKKVNYNFAWSIGAGVKYDINSNLALDLSY 203
Query: 204 RYIPHHIHSVNNSNAKSDV---ERVDRKGNAHIASLGINMHF 242
RYI N + ++ + ++H LG+ F
Sbjct: 204 RYINAGKAKTNGETNLGPINIKGNLESRLHSHDIMLGMTYLF 245
>gi|294851522|ref|ZP_06792195.1| predicted protein [Brucella sp. NVSL 07-0026]
gi|294820111|gb|EFG37110.1| predicted protein [Brucella sp. NVSL 07-0026]
Length = 87
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 30/99 (30%), Gaps = 12/99 (12%)
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
+ Y GG + +S + + +G G+DY ++ L Y
Sbjct: 1 MPYIAGGVAFGGIKNSL-------RIGGEESSKSKTQTGWTVGAGIDYAATDNVLLRLEY 53
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
RY + + ++ + LG+ F
Sbjct: 54 RYTDYGKKNFGLND-----LDTRGSFKTNDIRLGVAYKF 87
>gi|183601089|ref|ZP_02962582.1| hypothetical protein PROSTU_04716 [Providencia stuartii ATCC 25827]
gi|188019431|gb|EDU57471.1| hypothetical protein PROSTU_04716 [Providencia stuartii ATCC 25827]
Length = 244
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/232 (12%), Positives = 68/232 (29%), Gaps = 34/232 (14%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRL-----------YETHPLADTINRKTYNSLLP-NGLG 90
++ + +G YV + D + + G G
Sbjct: 15 SLPAFANTDDSKTGLYVTGKMGASIMQMSGQQFVYSGYADAGDNGTKNGDSHRTGVFGGG 74
Query: 91 IELGHNI--QLEDFVFGINCHTTAAKDDSTFYRLKEKYFI-------------YGDVVLK 135
+ LG++ Q + A S+ Y ++++ +++
Sbjct: 75 LALGYDFSNQFD-IPVRAELEFMARDKVSSTYNIRDRVRNGVHQTRDIKNQIKLNTLMVN 133
Query: 136 AGYSV---DSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
Y + + Y G + + + S + + + +G G++
Sbjct: 134 GYYDIKNSSNFTPYISVGLGYAAVDFKTTRADAYTPGLSLHDTHTHTANNFAWSVGAGVN 193
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y +N D + SYRY+ + + + K A+ LG+ F
Sbjct: 194 YALNDDWDMGLSYRYLDAGKADITTAVGDGE-NTSKIKVKANDIMLGLTYRF 244
>gi|153207702|ref|ZP_01946349.1| conserved domain protein [Coxiella burnetii 'MSU Goat Q177']
gi|165924204|ref|ZP_02220036.1| conserved domain protein [Coxiella burnetii RSA 334]
gi|212219010|ref|YP_002305797.1| hypothetical exported membrane spanning protein [Coxiella burnetii
CbuK_Q154]
gi|120576398|gb|EAX33022.1| conserved domain protein [Coxiella burnetii 'MSU Goat Q177']
gi|165916353|gb|EDR34957.1| conserved domain protein [Coxiella burnetii RSA 334]
gi|212013272|gb|ACJ20652.1| hypothetical exported membrane spanning protein [Coxiella burnetii
CbuK_Q154]
Length = 259
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/209 (11%), Positives = 64/209 (30%), Gaps = 31/209 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDD 116
Y G ++ + ++ G +G + G+ ++
Sbjct: 56 YQGTYLGGSFTVPIGSNV-------HQNGYTAGGHIGLRYYFLNPWFLGLEFAAMGNSEN 108
Query: 117 STFY---------------RLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVID-- 158
+T + + D+ + G ++ +Y GG A +
Sbjct: 109 ATTAESVLAPSPDDLIFNLVNQFRIKSNLDLTAQLGVNITPQTRVYIKGGASYARIRHIL 168
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN--- 215
+ + + + + ++G GL Y + Y Y + +++
Sbjct: 169 TVFNPATLTPTISLQRTTHKNRWGFLVGFGLGYDFCPWFGIFTEYNYYDYGRVGLDSLSN 228
Query: 216 --SNAKSDVERVDRKGNAHIASLGINMHF 242
N +D + + +A+ LG+N++F
Sbjct: 229 IRPNNGADTYHQNVRVHAYSVLLGVNLNF 257
>gi|238795889|ref|ZP_04639402.1| Outer membrane protein A [Yersinia mollaretii ATCC 43969]
gi|238720352|gb|EEQ12155.1| Outer membrane protein A [Yersinia mollaretii ATCC 43969]
Length = 350
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 48/189 (25%), Gaps = 24/189 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + IN G G LG+ Q + G
Sbjct: 28 WYTGGKLGWSQFQ-DTGSIINNDGPTHKDQIGAGAFLGY--QANQY-LGFEMGYDWLGRM 83
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
K + K Y V L + + +
Sbjct: 84 PYKGDTNNGAFKAQGV-QLAAKLSYPVAQDLD------VYTRLGGMVWRADTDGSIDGQR 136
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G S ++ +G +Y + + Y+++ + D V + + +
Sbjct: 137 YSAHDTGVSPLVALGAEYAWTKNWATRMEYQWV----------SNIGDKATVGARPDNGM 186
Query: 234 ASLGINMHF 242
S+G++ F
Sbjct: 187 LSVGVSYRF 195
>gi|22126613|ref|NP_670036.1| outer membrane protein A [Yersinia pestis KIM 10]
gi|45441153|ref|NP_992692.1| outer membrane protein A [Yersinia pestis biovar Microtus str.
91001]
gi|21959622|gb|AAM86287.1|AE013876_5 outer membrane porin A [Yersinia pestis KIM 10]
gi|45436013|gb|AAS61569.1| putative outer membrane porin A protein [Yersinia pestis biovar
Microtus str. 91001]
Length = 363
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 51/191 (26%), Gaps = 26/191 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + IN G G G+ Q + G
Sbjct: 38 WYTGGKLGWSQYQ-DTGSIINNDGPTHKDQLGAGAFFGY--QANQY-LGFEMGYDWLGRM 93
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVESDNSKN 171
K + K Y V L GG + S +
Sbjct: 94 PYKGDINNGAFKAQGV-QLAAKLSYPVAQDLDVYTRLGGLVW------RADAKGSFDGGL 146
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G S ++ +G +Y + + Y+++ N D E V + +
Sbjct: 147 DRASGHDTGVSPLVALGAEYAWTKNWATRMEYQWV----------NNIGDRETVGARPDN 196
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 197 GLLSVGVSYRF 207
>gi|304397112|ref|ZP_07378991.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. aB]
gi|304355261|gb|EFM19629.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. aB]
Length = 356
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 53/193 (27%), Gaps = 27/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + + G G +G+ Q + G
Sbjct: 28 WYTGAKLGWSQYHDTGYYGHGYENNDGPTHESQLGAGAFVGY--QANPY-LGFEMGYDWL 84
Query: 114 KDDSTFYRLKEKYFIYGDVV--LKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVESDNS 169
+ F V K Y ++ L GG N
Sbjct: 85 GRMPNKGNVTNGAFKAQGVQLAAKLSYPINDDLDVYTRLGGMVW-------RADATQTNQ 137
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ G S + +G++Y + + + Y+++ N D + V +
Sbjct: 138 TTGRISDHDTGVSPLAAVGVEYALTQNWATRLDYQWV----------NNIGDAQTVGARP 187
Query: 230 NAHIASLGINMHF 242
+ + S+G++ F
Sbjct: 188 DNGMLSVGVSYRF 200
>gi|206577508|ref|YP_002239403.1| outer membrane protein A [Klebsiella pneumoniae 342]
gi|288936252|ref|YP_003440311.1| OmpA domain protein transmembrane region-containing protein
[Klebsiella variicola At-22]
gi|290510692|ref|ZP_06550062.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55]
gi|206566566|gb|ACI08342.1| outer membrane protein A [Klebsiella pneumoniae 342]
gi|288890961|gb|ADC59279.1| OmpA domain protein transmembrane region-containing protein
[Klebsiella variicola At-22]
gi|289777408|gb|EFD85406.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55]
Length = 350
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 55/192 (28%), Gaps = 30/192 (15%)
Query: 57 NYVGLHISRLYETHPLA--DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + ++N G G G+ Q+ + G
Sbjct: 28 WYAGGKLGWSQFHDTGWYNSSLNNNGPTHESQLGAGAFGGY--QVNPY-LGFEMGYDWLG 84
Query: 115 ---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
K + K GY + D L IY G S+
Sbjct: 85 RMPYKGDQVNGAFKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWRADSSNSIA------- 136
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G G S V G+++ V DI+ Y+++ N D V + +
Sbjct: 137 ---GDNHDTGVSPVFAGGVEWAVTRDIATRLEYQWV----------NNIGDAGTVGVRPD 183
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 184 NGMLSVGVSYRF 195
>gi|329296508|ref|ZP_08253844.1| outer membrane protein A [Plautia stali symbiont]
Length = 356
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 58/194 (29%), Gaps = 29/194 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + H N N + G G LG+ Q + G
Sbjct: 28 WYTGAKLGW-SQYHDTGYYGNGYENNDGPTHESQLGAGAFLGY--QANPY-LGFELGYDW 83
Query: 113 AKDDSTFYRLKEKYFIYGDVV--LKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDN 168
+ F V K Y + D L +Y GG N
Sbjct: 84 LGRMPNKGNVTNGAFKAQGVQLAAKLSYPIADDLDVYTRLGGMVW-------RADSTQTN 136
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
N + G S + +G++Y + + + Y+++ N D V +
Sbjct: 137 PDNGRISNHNTGVSPLAAVGVEYALTKNWATRLDYQWV----------NNIGDAGTVGAR 186
Query: 229 GNAHIASLGINMHF 242
+ + S+G++ F
Sbjct: 187 PDNSMLSVGVSYRF 200
>gi|330505171|ref|YP_004382040.1| outer membrane protein [Pseudomonas mendocina NK-01]
gi|328919457|gb|AEB60288.1| outer membrane protein [Pseudomonas mendocina NK-01]
Length = 230
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G ++ D + S N + + G + +G DYM+ + L+A R
Sbjct: 135 PYVGAGINYTWIFDEHVGSAASANGFDNFRAKNSWGLAWQVGA--DYMLTDSLMLNAQVR 192
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YI + ++NA +VD + + +G+ F
Sbjct: 193 YIDIDTTAYVDNNALGVRAKVDVDVDPFVYMVGLGYKF 230
>gi|119387700|ref|YP_918734.1| hypothetical protein Pden_4978 [Paracoccus denitrificans PD1222]
gi|119378275|gb|ABL73038.1| hypothetical protein Pden_4978 [Paracoccus denitrificans PD1222]
Length = 416
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 50/160 (31%), Gaps = 35/160 (21%)
Query: 85 LPNGLGIELGHNIQL-EDFVFGINCHTTAAKDD-----STFYRLKEKYFIYGDVVLKAGY 138
N G+ G+ Q +FV GI H + ++ YG L+AGY
Sbjct: 284 DGNSYGLFAGYRRQWQNNFVGGIEVHYGRNGSNRFNLAELGGTVQFGKDTYGA-ELQAGY 342
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
++ L Y G+ D ++ + +GLDY V +
Sbjct: 343 AIKRALPYIAVGYANILDQD-----------------------AMTVSLGLDYAVTDRLI 379
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ A Y + S + R + GN I
Sbjct: 380 VGAKYTHYDIGDIS-----GIDSIHRFEGDGNMVSLRAAI 414
>gi|129136|sp|P09146|OMPA_ENTAE RecName: Full=Outer membrane protein A; Flags: Precursor
gi|40838|emb|CAA25062.1| unnamed protein product [Enterobacter aerogenes]
Length = 350
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 52/192 (27%), Gaps = 30/192 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN--SLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + N G G G+ Q+ + G
Sbjct: 28 WYAGGKLGWSQFHDTGWYNSNLNNNGPTHESQLGAGAFGGY--QVNPY-LGFEMGYDWLG 84
Query: 115 ---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ K GY + D L IY G S+
Sbjct: 85 RMPYKGVKVNGAFSSQAV-QLTAKLGYPITDDLDIYTRLGGMVWRADSSNSIA------- 136
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G G S V G+++ + DI+ Y+++ N D V + +
Sbjct: 137 ---GDNHDTGVSPVFAGGVEWAMTRDIATRLEYQWV----------NNIGDAGTVGVRPD 183
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 184 NGMLSVGVSYRF 195
>gi|327393374|dbj|BAK10796.1| outer membrane protein A precursor OmpA [Pantoea ananatis AJ13355]
Length = 363
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 57/192 (29%), Gaps = 24/192 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + N + + G G G+ Q + G
Sbjct: 34 WYTGAKLGWSQYHDTGYYGHNYQNNDGPTHESQLGAGAFAGY--QANPY-LGFELGYDWL 90
Query: 114 K-DDSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ ++ + G + K Y + D L IY G +
Sbjct: 91 GRMPNKGNQINGAFKAQGIQLAAKLSYPIADDLDIYTRLGGMVWRADSTQQNLATGTRIS 150
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ G S + +G++Y + + + Y+++ N D + V + +
Sbjct: 151 D-----HDTGVSPLAAVGVEYALTKNWATRLDYQWV----------NNIGDAQTVGARPD 195
Query: 231 AHIASLGINMHF 242
+ SLG++ F
Sbjct: 196 NGMLSLGVSYRF 207
>gi|238757655|ref|ZP_04618839.1| Outer membrane protein A [Yersinia aldovae ATCC 35236]
gi|238704160|gb|EEP96693.1| Outer membrane protein A [Yersinia aldovae ATCC 35236]
Length = 350
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 50/189 (26%), Gaps = 24/189 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G LG+ Q + G
Sbjct: 28 WYTGGKLGWSQYQNSGSI-INNDGPTHKDQLGAGAFLGY--QANQY-LGFEMGYDWLGRM 83
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
K + K Y V L + + +
Sbjct: 84 PYKGDTNNGAFKAQGV-QLAAKLSYPVAQDLD------VYTRLGGMVWRADADGSIGGVR 136
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G S ++ +G +Y + + Y++I N D V + + +
Sbjct: 137 NSNHDTGVSPLVALGAEYAWTKNWATRMEYQWI----------NNIGDRATVGARPDNGM 186
Query: 234 ASLGINMHF 242
S+G++ F
Sbjct: 187 LSVGVSYRF 195
>gi|89074664|ref|ZP_01161129.1| outer membrane protein, putative [Photobacterium sp. SKA34]
gi|89049602|gb|EAR55162.1| outer membrane protein, putative [Photobacterium sp. SKA34]
Length = 189
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 58/208 (27%), Gaps = 24/208 (11%)
Query: 36 LFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH 95
L A +G Y+G + N L G+ G+
Sbjct: 5 LLPLALVLTTASGAALADQTGPYIGASVGNATTDLKADHWEYNYDENVL---AYGVYGGY 61
Query: 96 NIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGA 154
N G+ + + Y + + ++ L ++ G
Sbjct: 62 NFTEN---LGLEATLGQTGEQDNIKKG------YATLTPRLMMPINDQLSLFAKAGVAYV 112
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
V + + + D G G G+++ V + L A Y+ + +
Sbjct: 113 AVDGDYDGAGDIN-----RHDIDVDGFGWTAGAGVNFAVAEHVDLRAGIDYLSTDLEKAD 167
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
N + ++ + +G+N +F
Sbjct: 168 ND------KDLNIDSETTMYYVGVNYNF 189
>gi|165977295|ref|YP_001652888.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190151211|ref|YP_001969736.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303250896|ref|ZP_07337088.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252762|ref|ZP_07338923.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248928|ref|ZP_07530938.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307253541|ref|ZP_07535410.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307257957|ref|ZP_07539710.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307264561|ref|ZP_07546144.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|165877396|gb|ABY70444.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189916342|gb|ACE62594.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302648412|gb|EFL78607.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302650246|gb|EFL80410.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306854539|gb|EFM86732.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306858989|gb|EFM91033.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306863504|gb|EFM95434.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306870090|gb|EFN01851.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 364
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/211 (14%), Positives = 60/211 (28%), Gaps = 41/211 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + N+ GI +G+ D
Sbjct: 26 FYAGAKAGWASFHDGIEQ--LDSAKNTDRGTKYGIN------RNSVTYGVFGGYQILNQD 77
Query: 117 STFYRLKEKYFIYGDVVL------------------------KAGYSVDSLL-IYGMGGF 151
+ Y +G V K Y V L +YG G
Sbjct: 78 KLGLAAELGYDYFGRVRGSEKPNGKADKKTFRHAAHGATIALKPSYEVLPDLDVYGKVGI 137
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ N+ K + SS++LG G++Y + +++ Y+++ +
Sbjct: 138 ALVNNTYKTF------NAAQEKVKTRRFQSSLILGAGVEYAILPELAARVEYQWLNNAGK 191
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + D + + S G++ F
Sbjct: 192 ASYSTLNRMGAT--DYRSDISSVSAGLSYRF 220
>gi|14331084|emb|CAC40971.1| hypothetical protein [Vibrio pommerensis]
Length = 378
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 56/191 (29%), Gaps = 24/191 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + G G+ G+ Q D+ + +
Sbjct: 36 FYVGGKAGLTQFSDECGANSLDC---EEQSEGFGVYGGY--QALDW-LAVEVGYDSLGKS 89
Query: 117 STFYRLKEK----YFIYGDVVL-KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
Y K V + G D L G F A + +EK S+
Sbjct: 90 KADYSALMKPGEVAHYDATVQGIELGLKADYALTERAGLFAKAGTLLWQVEKSGSEPGLG 149
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ + GSS++LG G++Y + + Y+Y + +
Sbjct: 150 SV-NQEEDGSSLMLGAGVEYRLTEHWNTRLEYQYFNEVGGEKTGGS------------DI 196
Query: 232 HIASLGINMHF 242
H +G++ F
Sbjct: 197 HFIGVGLDYRF 207
>gi|154706379|ref|YP_001423992.1| hypothetical exported membrane spanning protein [Coxiella burnetii
Dugway 5J108-111]
gi|154355665|gb|ABS77127.1| hypothetical exported membrane spanning protein [Coxiella burnetii
Dugway 5J108-111]
Length = 259
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/209 (12%), Positives = 64/209 (30%), Gaps = 31/209 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD 116
Y G ++ + ++ G +G + + G ++
Sbjct: 56 YQGTYLGGSFTVPIGSNV-------HQNGYTAGGHIGLRYYFSNPWFLGFEFAAMGNSEN 108
Query: 117 STFY---------------RLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVID-- 158
+T + + D+ + G ++ +Y GG A +
Sbjct: 109 ATTAESVLAPSPDDLIFNLVNQFRIKSNLDLTAQLGVNITPQTRVYIKGGASYARIRHIL 168
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN--- 215
+ + + + + +LG GL Y + Y Y + +++
Sbjct: 169 TVFNPATLTPTISLQRTTHKNRWGFLLGFGLGYDFCPWFGIFTEYNYYDYGRVGLDSLSN 228
Query: 216 --SNAKSDVERVDRKGNAHIASLGINMHF 242
N +D + + +A+ LG+N++F
Sbjct: 229 IRPNNGADTYHQNVRVHAYSVLLGVNLNF 257
>gi|32034275|ref|ZP_00134486.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209314|ref|YP_001054539.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae L20]
gi|126098106|gb|ABN74934.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 364
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/211 (14%), Positives = 60/211 (28%), Gaps = 41/211 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + N+ GI +G+ D
Sbjct: 26 FYAGAKAGWASFHDGIEQ--LDSAKNTDRGTKYGIN------RNSVTYGVFGGYQILNQD 77
Query: 117 STFYRLKEKYFIYGDVVL------------------------KAGYSVDSLL-IYGMGGF 151
+ Y +G V K Y V L +YG G
Sbjct: 78 KLGLAAELGYDYFGRVRGSEKPNGKADKKTFRHAAHGATIALKPSYEVLPDLDVYGKVGI 137
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ N+ K + SS++LG G++Y + +++ Y+++ +
Sbjct: 138 ALVNNTYKTF------NAAQEKVKTRRFQSSLILGAGVEYAILPELAARVEYQWLNNAGK 191
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + D + + S G++ F
Sbjct: 192 ASYSTLNRMGAT--DYRSDISSVSAGLSYRF 220
>gi|90578366|ref|ZP_01234177.1| outer membrane protein, putative [Vibrio angustum S14]
gi|90441452|gb|EAS66632.1| outer membrane protein, putative [Vibrio angustum S14]
Length = 189
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 57/208 (27%), Gaps = 24/208 (11%)
Query: 36 LFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH 95
L A +G YVG + + N + G+ G+
Sbjct: 5 LLPLALVLTTASGAALADQTGPYVGASLGNATTDLKADHWEHNYDENVV---AYGLYGGY 61
Query: 96 NIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGA 154
N G+ + + Y + + ++ L ++ G
Sbjct: 62 NFNEN---LGLEATLGQTGEQDNIKKG------YATLTPRVMMPLNDQLSLFAKAGVAYV 112
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
V + D G G G+++ V I L A Y+ + +
Sbjct: 113 AVDGDY-----DGIGNMNRHDIDVDGFGWTAGAGVNFAVAEHIDLRAGIDYLSTDLEKAD 167
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
N + ++ + +G+N +F
Sbjct: 168 ND------KDLNIDSETTMYYVGVNYNF 189
>gi|322515689|ref|ZP_08068662.1| OmpA protein [Actinobacillus ureae ATCC 25976]
gi|322118234|gb|EFX90526.1| OmpA protein [Actinobacillus ureae ATCC 25976]
Length = 383
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 67/219 (30%), Gaps = 41/219 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + + H + + I +G+ +
Sbjct: 28 FYAGAKVGQSSFHHGVNQLKFGHDDRYNDETRT-----YGINRNSVTYGVFGGYQILNQN 82
Query: 117 STFYRLKEKYFIYGDVVLKAG-------------------YSVDSLL-IYGMGGFGGAYV 156
+ + Y YG V G Y V L +YG G
Sbjct: 83 NFGLAAELGYDYYGRVRGNKGEFRSFKHSAHGLNFALKPSYEVLPNLDVYGKVGVAVVRN 142
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH----- 211
++N+ +F +S +LG G++Y++ +++ Y+Y+ +
Sbjct: 143 DYKFYS---AENTNEPTEKFHKLKASTILGAGVEYVILPELAARVEYQYLNKAGNLNKAG 199
Query: 212 ------SVNNSNAKSDVERVDRKG--NAHIASLGINMHF 242
+ N + +S + V + + H ++G++ F
Sbjct: 200 NFNKAGNFNKALVRSGGQDVSYQYAPDIHSVTVGLSYRF 238
>gi|301020993|ref|ZP_07185044.1| OmpA-like transmembrane domain protein [Escherichia coli MS 69-1]
gi|300398367|gb|EFJ81905.1| OmpA-like transmembrane domain protein [Escherichia coli MS 69-1]
Length = 251
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/232 (14%), Positives = 65/232 (28%), Gaps = 34/232 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL---YETHPLADTINRKTYNSLLPN------GLGIELGH 95
Q +G YV Y + G G+ +G+
Sbjct: 20 SAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDFGDDVYKYKGGDKNDTVFGAGLAVGY 79
Query: 96 N-IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG--------------DVVLKAGYSV 140
+ Q + + Y L + G +++ Y
Sbjct: 80 DFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGDGGREDTQNRLSVNTLMVNTYYDF 139
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-------GHGSSVVLGIGLD 190
+ + G G A + + S N + + +G G+
Sbjct: 140 RNSSAFTPWVSVGLGYARIHHKATYTDTSWNKSGEVSDISALHYSGYDNNFAWSIGAGVR 199
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + DI+L SYRY+ S++ +A+ D + + + G+ +F
Sbjct: 200 YDITPDIALDLSYRYLDAGKSSLSYKDAEGDKYKSEADVKSRDIMFGVTYNF 251
>gi|300716120|ref|YP_003740923.1| outer membrane protein A [Erwinia billingiae Eb661]
gi|299061956|emb|CAX59072.1| Outer membrane protein A [Erwinia billingiae Eb661]
Length = 357
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 58/193 (30%), Gaps = 26/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + H N N + G G G+ Q + G
Sbjct: 28 WYTGAKLGW-SQYHDTGYYGNGYANNDGPTHESQLGAGAFGGY--QANQY-LGFELGYDW 83
Query: 113 AKDDSTFYRLKEKYFIYGDVV--LKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ F V K Y + D L +Y G + + +
Sbjct: 84 LGRMPNKGNVTNGAFKAQGVQLAAKLSYPITDDLDVYTRLGGMVWRADSTQQNTITGNRQ 143
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ G S + +G++Y + + + Y+++ N D + V +
Sbjct: 144 SD-----HDTGVSPLAAVGVEYALTQNWATRLDYQWV----------NNIGDAQTVGARP 188
Query: 230 NAHIASLGINMHF 242
+ + +LG++ F
Sbjct: 189 DNGMLALGVSYRF 201
>gi|310767218|gb|ADP12168.1| outer membrane protein A [Erwinia sp. Ejp617]
Length = 355
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 55/193 (28%), Gaps = 27/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + H N N + G G LG+ Q + G
Sbjct: 28 WYTGGKLGW-SQYHDTGYYGNGYENNDGPTHESQLGAGAFLGY--QANQY-LGFELGYDW 83
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ G + G + + L Y + Y + N
Sbjct: 84 LGRMPNKGDVTN-----GAFKAQ-GIQMAAKLSYPIADDLDVYTRLGGMVWRADATQTNP 137
Query: 173 KGR---FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S + +G++Y V + + Y+++ N D V +
Sbjct: 138 TFGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGDAGTVGARP 187
Query: 230 NAHIASLGINMHF 242
+ + S+G++ F
Sbjct: 188 DNSMLSVGVSYRF 200
>gi|213419602|ref|ZP_03352668.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 287
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 28/191 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 52 WYAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 106
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVESDNSKN 171
K + K GY + L GG +S+
Sbjct: 107 PYKGDNTNGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGG 158
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 159 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDN 208
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 209 GLLSVGVSYRF 219
>gi|289809683|ref|ZP_06540312.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 264
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 28/191 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 4 WYAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 58
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVESDNSKN 171
K + K GY + L GG +S+
Sbjct: 59 PYKGDNTNGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGG 110
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 111 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDN 160
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 161 GLLSVGVSYRF 171
>gi|300021628|ref|YP_003754239.1| hypothetical protein Hden_0091 [Hyphomicrobium denitrificans ATCC
51888]
gi|299523449|gb|ADJ21918.1| hypothetical protein Hden_0091 [Hyphomicrobium denitrificans ATCC
51888]
Length = 500
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/240 (14%), Positives = 71/240 (29%), Gaps = 15/240 (6%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDD--EYGIWSGNYVGLHISRLYETHPLAD 74
+V+ + S A L + +++ E WSG Y G +
Sbjct: 3 LVLGSLSAAALLCSMASAAYADGPFGSLKDTAPVIEQPTWSGVYFGAGWGYGHNRSKNNY 62
Query: 75 TINRKTYN-------SLLPNGLGIELGHNIQLED-FVFGINCHTTAAKD--DSTFYRLKE 124
+ + + + G + Q+ D FV GI + +
Sbjct: 63 RDSSGDADSSSSRTEHADGGLVSLLYGADRQIGDRFVVGIFGDIDLSDITRGNRDEHNAL 122
Query: 125 KYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVE--SDNSKNAKGRFDGHGS 181
+ + +AG+ ++ LI+ G+ A+ + ++ S +GR
Sbjct: 123 EIDRAWAIGARAGFLLNSRTLIFATAGYTQAHFDNDGWWDIDPPSSPGTTLRGRGSRTFG 182
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+G G++ + + L RY N+ N + A +
Sbjct: 183 GYFVGGGVETRLTDNFFLRGEVRYSDFAGRVTNSGNFDDADYVDSEVPSLLTARASLVYK 242
>gi|307246787|ref|ZP_07528853.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307251124|ref|ZP_07533047.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|307255770|ref|ZP_07537572.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307260222|ref|ZP_07541930.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306852258|gb|EFM84497.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306856856|gb|EFM88989.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306861233|gb|EFM93225.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306865669|gb|EFM97549.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 364
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/211 (14%), Positives = 60/211 (28%), Gaps = 41/211 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + N+ GI +G+ D
Sbjct: 26 FYAGAKAGWASFHDGIEQ--LDSAKNTDRGTKYGIN------RNSVTYGVFGGYQILNQD 77
Query: 117 STFYRLKEKYFIYGDVVL------------------------KAGYSVDSLL-IYGMGGF 151
+ Y +G V K Y V L +YG G
Sbjct: 78 KLGLAAELGYDYFGRVRGSEKPNGKADKKTFRHAAHGATIALKPSYEVLPDLDVYGKVGI 137
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ N+ K + SS++LG G++Y + +++ Y+++ +
Sbjct: 138 ALVNNTYKTF------NAAQEKVKTRRFQSSLILGAGVEYAILPELAARVEYQWLNNAGK 191
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + D + + S G++ F
Sbjct: 192 ASYSTLNRMGAT--DYRSDISSVSAGLSYRF 220
>gi|188534230|ref|YP_001908027.1| outer membrane protein A [Erwinia tasmaniensis Et1/99]
gi|188029272|emb|CAO97149.1| Outer membrane protein A [Erwinia tasmaniensis Et1/99]
Length = 355
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 52/192 (27%), Gaps = 25/192 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + N G G LG+ Q + G
Sbjct: 28 WYTGGKLGWSQYHDTGYYGNGYQNNNGPTHESQLGAGAFLGY--QANQY-LGFELGYDWL 84
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ G + G + + L Y + Y + N
Sbjct: 85 GRMPNKGSVTN-----GAFKAQ-GVQLAAKLSYPIADDLDVYTRLGGMVWRADSTQTNPT 138
Query: 174 GR---FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G S + +G++Y + + + Y+++ N D V + +
Sbjct: 139 YGRISNHDTGVSPLAAVGVEYALTKNWATRLDYQWV----------NNIGDAGTVGTRPD 188
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 189 NSMLSVGVSYRF 200
>gi|330010302|ref|ZP_08306729.1| outer membrane protein A [Klebsiella sp. MS 92-3]
gi|328534592|gb|EGF61172.1| outer membrane protein A [Klebsiella sp. MS 92-3]
Length = 364
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 53/193 (27%), Gaps = 26/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + N N G G G+ Q+ + G
Sbjct: 36 WYAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGY--QVNPY-LGFEMGYDWL 92
Query: 114 K---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + K GY + D L IY G
Sbjct: 93 GRMAYKGSVDNGAFKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTG--- 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S V G+++ V DI+ Y+++ N D V +
Sbjct: 149 --VSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWV----------NNIGDAGTVGTRP 196
Query: 230 NAHIASLGINMHF 242
+ + SLG++ F
Sbjct: 197 DNGMLSLGVSYRF 209
>gi|315936245|gb|ADU55796.1| putative heme-binding phage-associated protein [Bartonella
henselae]
Length = 163
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 30/106 (28%), Gaps = 15/106 (14%)
Query: 23 SLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT------I 76
+ A D+ +P + W+G Y+G + + D
Sbjct: 1 AQAADVIVPH--------EVAPTVISAPAFSWTGFYIGGQVGNFSSKVEITDPNKKDKLF 52
Query: 77 NRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYR 121
++ GI G N+ L + + G+ A +
Sbjct: 53 SKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTS 98
>gi|52425273|ref|YP_088410.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307325|gb|AAU37825.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 368
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 58/199 (29%), Gaps = 19/199 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINC---HTTA 112
Y G + G+ G+ ++ +
Sbjct: 38 FYAGAKAGWASFHDGYTQYAEDGVGSHTKSVTYGVFGGYQIFNRDNLGLAVELGYDDFGR 97
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLI-------YGMGGFGGAYVIDSSLEKVE 165
A + + + LK Y + +L YG G +
Sbjct: 98 AALRTNGATSAKHTNHGAHLSLKPSYDLGALAPVLSGLDVYGKVGAALVRSDYKVNDGYS 157
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+K+ +S++LG GL+Y + +++ Y+++ + + N+N
Sbjct: 158 YGFNKSDFAD-HSLKTSLLLGAGLEYALPSLPELAFRLEYQWLN-KVGKLENANG----T 211
Query: 224 RVDRKGNAHIASLGINMHF 242
R D H + G++ F
Sbjct: 212 RFDYTPEIHSVTAGVSYRF 230
>gi|315181647|gb|ADT88560.1| Outer membrane protein [Vibrio furnissii NCTC 11218]
Length = 189
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 58/193 (30%), Gaps = 18/193 (9%)
Query: 57 NYVGLHISRL-------YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
YVG + + T T + I G+ Q + F +
Sbjct: 7 WYVGGALGQARFDDASVSGTVMGYSTTQDLSLEDDKSTIASIFGGY--QFNRY-FALEGS 63
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
T + D + ++ G V +
Sbjct: 64 VTGIDALDGSVVTVGDMSYIAIQPKVSLPVTDHVSLFAKAGVAYFNAEIKVSNAVAGYSG 123
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ D G +LG+G++ + + AS+ Y+ + VN A + +E
Sbjct: 124 YSTFSDSDVTG---ILGLGVEVAATDNWHIRASWDYLRPELDVVNVGYANASIET----- 175
Query: 230 NAHIASLGINMHF 242
+ ++ SLG++ HF
Sbjct: 176 DINVFSLGVSYHF 188
>gi|153947861|ref|YP_001401507.1| outer membrane protein A [Yersinia pseudotuberculosis IP 31758]
gi|152959356|gb|ABS46817.1| outer membrane protein A [Yersinia pseudotuberculosis IP 31758]
Length = 357
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 51/191 (26%), Gaps = 26/191 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + IN G G G+ Q + G
Sbjct: 32 WYTGGKLGWSQYQ-DTGSIINNDGPTHKDQLGAGAFFGY--QANQY-LGFEMGYDWLGRM 87
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVESDNSKN 171
K + K Y V L GG + S +
Sbjct: 88 PYKGDINNGAFKAQGV-QLAAKLSYPVAQDLDVYTRLGGLVW------RADAKGSFDGGL 140
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G S ++ +G +Y + + Y+++ N D E V + +
Sbjct: 141 DRASGHDTGVSPLVALGAEYAWTKNWATRMEYQWV----------NNIGDRETVGARPDN 190
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 191 GLLSVGVSYRF 201
>gi|262039986|ref|ZP_06013251.1| outer membrane protein A [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042654|gb|EEW43660.1| outer membrane protein A [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 364
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 53/193 (27%), Gaps = 26/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + N N G G G+ Q+ + G
Sbjct: 36 WYAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGY--QVNPY-LGFEMGYDWL 92
Query: 114 K---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + K GY + D L IY G
Sbjct: 93 GRMAYKGSVDNGAFKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTG--- 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S V G+++ V DI+ Y+++ N D V +
Sbjct: 149 --VSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWV----------NNIGDAGTVGTRP 196
Query: 230 NAHIASLGINMHF 242
+ + SLG++ F
Sbjct: 197 DNGMLSLGVSYRF 209
>gi|260769108|ref|ZP_05878041.1| outer membrane protein [Vibrio furnissii CIP 102972]
gi|260614446|gb|EEX39632.1| outer membrane protein [Vibrio furnissii CIP 102972]
Length = 189
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 58/193 (30%), Gaps = 18/193 (9%)
Query: 57 NYVGLHISRL-------YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
YVG + + T T T I G+ Q + F +
Sbjct: 7 WYVGGALGQARFDDASVSGTVMGYSTTQDLTLEDDKSTIASIFGGY--QFNRY-FALEGS 63
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
T + D + ++ G V +
Sbjct: 64 VTGIDALDGSVVTVGDMSYIAIQPKVSLPVTDHVSLFAKAGVAYFNAEIKVSNAVAGYSG 123
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ D G +LG+G++ + + AS+ Y+ + VN A + VE
Sbjct: 124 YSTFSDSDVTG---ILGLGVEVAATDNWHIRASWDYLRPELDVVNVGYANASVET----- 175
Query: 230 NAHIASLGINMHF 242
+ ++ SLG++ HF
Sbjct: 176 DINVFSLGVSYHF 188
>gi|259908883|ref|YP_002649239.1| outer membrane protein A [Erwinia pyrifoliae Ep1/96]
gi|224964505|emb|CAX56015.1| Outer membrane protein A [Erwinia pyrifoliae Ep1/96]
gi|283478876|emb|CAY74792.1| Outer membrane protein A precursor [Erwinia pyrifoliae DSM 12163]
Length = 355
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 55/193 (28%), Gaps = 27/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + H N N + G G LG+ Q + G
Sbjct: 28 WYTGGKLGW-SQYHDTGYYGNGYENNDGPTHESQLGAGAFLGY--QANQY-LGFELGYDW 83
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ G + G + + L Y + Y + N
Sbjct: 84 LGRMPNKGDVTN-----GAFKAQ-GIQMAAKLSYPIADDLDVYTRLGGMVWRADATQTNP 137
Query: 173 KGR---FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S + +G++Y V + + Y+++ N D V +
Sbjct: 138 TFGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGDAGTVGARP 187
Query: 230 NAHIASLGINMHF 242
+ + S+G++ F
Sbjct: 188 DNSMLSVGVSYRF 200
>gi|251792331|ref|YP_003007056.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
gi|247533723|gb|ACS96969.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
Length = 346
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 57/191 (29%), Gaps = 15/191 (7%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G H L + GI G+ I +
Sbjct: 28 FYAGAKAGWASVHHGLGQFTDGNDGKIRRNSEAYGIFGGYQITDN---LAVEAGYEYFGR 84
Query: 116 DSTFYRLKEKYFIYG---DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
Y +++ + LK Y V D+L +YG G + +D N
Sbjct: 85 AKVKYSDGDQFRHTAHGTTLALKGSYPVLDNLDVYGRAGAALIRSDYKQVNDGVADKYHN 144
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
K S V G++Y + +++L A Y+++ + V +
Sbjct: 145 LK-------VSPVFAAGVEYAILPELALRAEYQWVSRVGNLGKAVRKAGYESDVRYSPDI 197
Query: 232 HIASLGINMHF 242
++G++ F
Sbjct: 198 GSVAVGLSYRF 208
>gi|253990221|ref|YP_003041577.1| outer membrane protein A [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781671|emb|CAQ84834.1| outer membrane protein a (outer membrane protein ii*) [Photorhabdus
asymbiotica]
Length = 366
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 56/196 (28%), Gaps = 30/196 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G + P G G LG+ Q + G
Sbjct: 28 WYTGGKLGWSQYHDVNFYGNGYTNEIGNGPTHKNQLGAGAYLGY--QTNPY-LGFEIGYD 84
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVES 166
+ K + K Y + D L IY GG + +
Sbjct: 85 WLGRMPYKGSVNNGAFKTHGFQLAT-KLSYPITDDLDIYTRLGGMVW------RADSKAT 137
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ N + G S + IG++Y + + + Y+++ N D V
Sbjct: 138 YGATNTHRKDHDTGVSPLAAIGVEYALTKNWATRLDYQWV----------NNIGDAGTVG 187
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 188 ARPDNGLLSVGVSYRF 203
>gi|300977693|ref|ZP_07174016.1| conserved domain protein [Escherichia coli MS 45-1]
gi|300409817|gb|EFJ93355.1| conserved domain protein [Escherichia coli MS 45-1]
Length = 158
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYD 196
+ G G A + + D + GR S LG G+ Y V D
Sbjct: 53 FTPWVSAGIGYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPD 112
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I+L SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 113 IALDLSYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDILLGVTYNF 158
>gi|260777303|ref|ZP_05886197.1| putative outer membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606969|gb|EEX33243.1| putative outer membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
Length = 196
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 27/193 (13%)
Query: 58 YVGLHISRL--------YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
Y+G+ + + Y T + + + +G+ Q D+ F I
Sbjct: 23 YLGVAVGQAKFKDTYSSYNTTLFGNGSYKLDLEDDDSTAAKLFVGY--QFNDY-FAIEGS 79
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
Y D ++ GG + SD +
Sbjct: 80 LGGYDAIDGSYVSIGDMTFLATQAKGILPIGDRFNLFVKGGIAYFGAEFKTSYATVSDEA 139
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ G G ++ ++ +I LSA + YI + V N E + +
Sbjct: 140 ITG-----------MYGAGAEFAISKNIKLSAEFDYIRPELEVVKIGN-----ETLSVES 183
Query: 230 NAHIASLGINMHF 242
+ SLG++ HF
Sbjct: 184 DITTLSLGLSYHF 196
>gi|56696999|ref|YP_167361.1| outer membrane protein, putative [Ruegeria pomeroyi DSS-3]
gi|56678736|gb|AAV95402.1| outer membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 178
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 59/190 (31%), Gaps = 32/190 (16%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
++ G WSG Y+GL + P A G +G+N L
Sbjct: 15 VAVSMAAAPAMAGDWSGAYLGLGVGYGDADGPGAR--------DGEAASFGGHIGYNFDL 66
Query: 100 ED-FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ FV G +D G + +KAGY +L YG+ G
Sbjct: 67 GNRFVMGGELEYDRVNNDLGAGGGT--LDEIGRLKVKAGYDFGPVLGYGVLGAA------ 118
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
G+ + +V G+GL V +S+S + H +
Sbjct: 119 -------------RATSTFGNENGLVYGLGLAMPVTDYLSVSGEV--LRHQFKDFGGAGN 163
Query: 219 KSDVERVDRK 228
DV + +
Sbjct: 164 DFDVNTFNLR 173
>gi|238785957|ref|ZP_04629921.1| Outer membrane protein A [Yersinia bercovieri ATCC 43970]
gi|238713147|gb|EEQ05195.1| Outer membrane protein A [Yersinia bercovieri ATCC 43970]
Length = 350
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 48/189 (25%), Gaps = 24/189 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + I G G LG+ Q + G
Sbjct: 28 WYTGGKLGWSQFQ-DTGSIIENDGPTHKDQVGAGAFLGY--QANQY-LGFEMGYDWLGRM 83
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
K + K Y V L + + + +
Sbjct: 84 PYKGDTNNGAFKAQGV-QLAAKLSYPVAQDLD------VYTRLGGMVWRADATGSINGDR 136
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G S ++ +G +Y + + Y+++ N D V + + +
Sbjct: 137 TSGHDTGVSPLVALGAEYAWTKNWATRMEYQWV----------NNIGDRATVGARPDNGM 186
Query: 234 ASLGINMHF 242
S+G++ F
Sbjct: 187 LSVGVSYRF 195
>gi|292487869|ref|YP_003530744.1| outer membrane protein A [Erwinia amylovora CFBP1430]
gi|292899094|ref|YP_003538463.1| outer membrane protein A [Erwinia amylovora ATCC 49946]
gi|291198942|emb|CBJ46052.1| outer membrane protein A [Erwinia amylovora ATCC 49946]
gi|291553291|emb|CBA20336.1| Outer membrane protein A precursor [Erwinia amylovora CFBP1430]
gi|312171991|emb|CBX80248.1| Outer membrane protein A precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 355
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 55/193 (28%), Gaps = 27/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + H N N + G G LG+ Q + G
Sbjct: 28 WYTGGKLGW-SQYHDTGYYGNGYENNDGPTHESQLGAGAFLGY--QANQY-LGFELGYDW 83
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ G + G + + L Y + Y + N
Sbjct: 84 LGRMPNKGDVTN-----GAFKAQ-GIQMAAKLSYPIADDLDVYTRLGGMVWRADATQTNP 137
Query: 173 KGR---FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S + +G++Y V + + Y+++ N D V +
Sbjct: 138 TYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGDAGTVGARP 187
Query: 230 NAHIASLGINMHF 242
+ + S+G++ F
Sbjct: 188 DNSMLSVGVSYRF 200
>gi|261344255|ref|ZP_05971899.1| outer membrane protein A [Providencia rustigianii DSM 4541]
gi|282567857|gb|EFB73392.1| outer membrane protein A [Providencia rustigianii DSM 4541]
Length = 353
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 53/192 (27%), Gaps = 29/192 (15%)
Query: 57 NYVGLHISRL-YETHPLADTIN---RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
Y G + YE D + G G+ G+ + G
Sbjct: 28 WYTGGKLGWSHYEHAKFTDEAGDTVGTGKKTRDQLGAGLYAGYQY---NQYMGFEMGYDW 84
Query: 113 AKDDSTFYRLKEKYFIYG-DVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSK 170
G + K Y + L +Y G
Sbjct: 85 FGKMKYKGTNPGSVSSMGVSLTTKLSYPIMEDLDVYTRLGGMVYRTEAKV---------- 134
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
N G+ G S V +G++Y + +++ Y+++ + D + + +
Sbjct: 135 NNSGKETDTGVSPVYALGVEYAITPELATRLDYQWV----------SGMGDKDNIGVSPD 184
Query: 231 AHIASLGINMHF 242
+ S+G+ F
Sbjct: 185 NGMLSVGLAYRF 196
>gi|238919302|ref|YP_002932817.1| outer membrane protein A [Edwardsiella ictaluri 93-146]
gi|238868871|gb|ACR68582.1| outer membrane protein A [Edwardsiella ictaluri 93-146]
Length = 353
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 59/189 (31%), Gaps = 24/189 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + H ++++ PN LG Q + G
Sbjct: 28 WYVGGKLGWS---HFISNSFEDMGTTKSHPNQLGAGAFFGYQANPY-LGFEMGYDWLGRM 83
Query: 117 STFYRLKEKYFIYG-DVVLKAGYS-VDSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNAK 173
S + K+ G + K Y +D+L +Y GG + +
Sbjct: 84 SYTGDVNAKFKSQGVQLAAKLSYPLMDNLDVYTRLGGMVW-------RSDIHGAANGGEY 136
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G S + IG++Y +N D + Y+Y+ N + + +
Sbjct: 137 TSSHDTGVSPLAAIGVEYALNKDWATRLDYQYV----------NKVGTSSETGARPDNTM 186
Query: 234 ASLGINMHF 242
SLG+ F
Sbjct: 187 LSLGVVYRF 195
>gi|317493466|ref|ZP_07951887.1| hypothetical protein HMPREF0864_02652 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918409|gb|EFV39747.1| hypothetical protein HMPREF0864_02652 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 210
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 63/201 (31%), Gaps = 30/201 (14%)
Query: 55 SGNYVGLHISRLYE--THPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTT 111
+G Y G + E + T + ++ G+ G+N Q E + +
Sbjct: 27 TGYYAGAKLGTSLEQIHGQKSATGSSVPRDTKQAGTAGLVFGYNFQNEFNLPIRAELDYS 86
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS----------LLIYGMGGFGGAYVIDSSL 161
T + +K + ++ ++ + Y G G A V
Sbjct: 87 FRDTTDTDHFIKADNTRTHN-RVRLQTAMLNGYYDINTDTAFTPYISAGIGYANVNLK-- 143
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ A +G + +G G+ Y +N + L Y+Y+ +
Sbjct: 144 -----NTQGGASHSGNGDNFAWSVGTGVSYAINNHLDLDLGYKYLDAGDAT--------- 189
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ K H + G+N +F
Sbjct: 190 AQASKVKVATHDFTAGVNYYF 210
>gi|3915781|sp|P24017|OMPA_KLEPN RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|3201545|emb|CAA04450.1| outer membrane protein A [Klebsiella pneumoniae]
Length = 344
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 53/193 (27%), Gaps = 26/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + N N G G G+ Q+ + G
Sbjct: 16 WYAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGY--QVNPY-LGFEMGYDWL 72
Query: 114 K---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + K GY + D L IY G
Sbjct: 73 GRMAYKGSVDNGAFKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTG--- 128
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S V G+++ V DI+ Y+++ N D V +
Sbjct: 129 --VSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWV----------NNIGDAGTVGTRP 176
Query: 230 NAHIASLGINMHF 242
+ + SLG++ F
Sbjct: 177 DNGMLSLGVSYRF 189
>gi|110835522|ref|YP_694381.1| hypothetical protein ABO_2661 [Alcanivorax borkumensis SK2]
gi|110648633|emb|CAL18109.1| hypothetical protein ABO_2661 [Alcanivorax borkumensis SK2]
Length = 251
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 67/224 (29%), Gaps = 36/224 (16%)
Query: 55 SGNYVGLHISRLYETHP---------------LADTINRKTYNSLLPNGLGIELGHNIQL 99
+G GL++ + LA N G+ +N+ L
Sbjct: 28 TGVQAGLNLGYEDSSMDWETDSIITPATPGNSLAVGANDSESLDDSAFAYGVFTSYNMAL 87
Query: 100 ED-FVFGINCHTTAAKDDSTFYRL------------KEKYFIYGDVVLKAGYSVD-SLLI 145
D ++ G + + + + + + +K GY ++ S L
Sbjct: 88 NDRWIVGAELAYQGSNTSDSVKSIPGDPLAGNQTEAEVEINQTFLLGIKGGYLLNASTLA 147
Query: 146 YGMGGFGGAYVIDSSLEKVESD----NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y V +S + S D + + L +GL+ ++ ++S+ A
Sbjct: 148 YSTLSATLTEVEVNSDCPSDGTVCNPGSPARSDSDDDNITGWALALGLEKSLSENLSVRA 207
Query: 202 SYRYIPHHIHSVNN---SNAKSDVERVDRKGNAHIASLGINMHF 242
YRY +V N ++ D + L F
Sbjct: 208 EYRYADLGTANVTAVKKENGEAFGIDADIDVTSQALLLAAVYKF 251
>gi|42528870|gb|AAS18468.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum]
Length = 319
Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 24/159 (15%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAK-DDSTFYRLKEKYFIYG-DVVLKAGYSV-DSLL 144
G G G+ Q+ +V G + Y G + K GY + D L
Sbjct: 32 GAGAFGGY--QVNPYV-GFEMGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLD 88
Query: 145 IYGM-GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
+Y GG +S+ + G S V G++Y + +I+ Y
Sbjct: 89 VYTRLGGMVW-------RADTKSNVPGGPSTKDHDTGVSPVFAGGIEYAITPEIATRLEY 141
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ +N D + + + + S+G++ F
Sbjct: 142 QW----------TNNIGDANTIGTRPDNGLLSVGVSYRF 170
>gi|50120684|ref|YP_049851.1| outer membrane protein A [Pectobacterium atrosepticum SCRI1043]
gi|49611210|emb|CAG74656.1| outer-membrane protein A [Pectobacterium atrosepticum SCRI1043]
Length = 366
Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 54/197 (27%), Gaps = 27/197 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSL---LPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + N+ G G +G+ Q + G
Sbjct: 28 WYTGGKLGVSQFHDTGFYGNGYTGVNNNPIKSKLGAGAFVGY--QANPY-LGFELGYDWL 84
Query: 114 KDDSTFYRLKEKYFIYGDVVL-------KAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVE 165
+ K Y V L +Y G G S
Sbjct: 85 GRMK-YAGSTASNDDSASFKAQGIQLAAKLSYPVMPDLDVYTRLG--GMVWRADSHAATS 141
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ A D G S + IG++Y ++ + + Y+++ + D V
Sbjct: 142 VNTGTRADINNDDTGVSPLAAIGVEYAIDKNWATRVDYQWV----------SNIGDAGTV 191
Query: 226 DRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 192 GARPDNLLMSVGLSYRF 208
>gi|330447676|ref|ZP_08311324.1| ompA-like transmembrane domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491867|dbj|GAA05821.1| ompA-like transmembrane domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 186
Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/208 (12%), Positives = 58/208 (27%), Gaps = 27/208 (12%)
Query: 36 LFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH 95
L A +G YVG + + N + G+ G+
Sbjct: 5 LLPLALVLTTASGAALADQTGPYVGASLGNATTDLKAENWNYNYDENVV---AYGLYGGY 61
Query: 96 NIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGA 154
N G+ + + Y + + + D ++ G
Sbjct: 62 NFTEN---LGLEATLGQTGEKDNIKKG------YATLTPRVMLPLNDQFSLFAKAGVAYV 112
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ + + D G G G+++ V + + A Y+ + + +
Sbjct: 113 --------AADGNWQDIKRAHIDVDGWGWTAGAGVNFAVAEHVDIRAGIDYLSTDLKNAD 164
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
N + ++ + +G+N +F
Sbjct: 165 ND------KDLNLDSETTMYYVGVNYNF 186
>gi|254466120|ref|ZP_05079531.1| putative outer membrane protein [Rhodobacterales bacterium Y4I]
gi|206687028|gb|EDZ47510.1| putative outer membrane protein [Rhodobacterales bacterium Y4I]
Length = 180
Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 47/180 (26%), Gaps = 30/180 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G W+G Y+G I +L + + Y GI G+N FV G
Sbjct: 31 GDWTGFYLGGQIGQLDVDATNGASGDDAAY--------GIHAGYNYDFGRFVLGGELDYD 82
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D +KAGY ++L Y GG A
Sbjct: 83 TTDVD---LGGGATVDSVARAKVKAGYDFGNVLAYVTGGVAEADSSL------------- 126
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G + G+GL Y V + + A + +
Sbjct: 127 ------GSETGEFYGVGLAYQVTDQWQIGGEVLEHEFDDFGNSGVGADATSVSLRASFKF 180
>gi|152969543|ref|YP_001334652.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238894012|ref|YP_002918746.1| outer membrane protein A [Klebsiella pneumoniae NTUH-K2044]
gi|7442975|pir||JC6558 outer membrane protein A precursor - Klebsiella pneumoniae
gi|150954392|gb|ABR76422.1| outer membrane protein 3a (II*;G;d) [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238546328|dbj|BAH62679.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 356
Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 53/193 (27%), Gaps = 26/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + N N G G G+ Q+ + G
Sbjct: 28 WYAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGY--QVNPY-LGFEMGYDWL 84
Query: 114 K---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + K GY + D L IY G
Sbjct: 85 GRMAYKGSVDNGAFKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTG--- 140
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S V G+++ V DI+ Y+++ N D V +
Sbjct: 141 --VSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWV----------NNIGDAGTVGTRP 188
Query: 230 NAHIASLGINMHF 242
+ + SLG++ F
Sbjct: 189 DNGMLSLGVSYRF 201
>gi|51595793|ref|YP_069984.1| outer membrane protein A [Yersinia pseudotuberculosis IP 32953]
gi|108806724|ref|YP_650640.1| outer membrane protein A [Yersinia pestis Antiqua]
gi|108812705|ref|YP_648472.1| outer membrane protein A [Yersinia pestis Nepal516]
gi|145598823|ref|YP_001162899.1| outer membrane protein A [Yersinia pestis Pestoides F]
gi|149366590|ref|ZP_01888624.1| putative outer membrane porin A protein [Yersinia pestis CA88-4125]
gi|162418551|ref|YP_001607555.1| outer membrane protein A [Yersinia pestis Angola]
gi|165924613|ref|ZP_02220445.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165940134|ref|ZP_02228667.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011945|ref|ZP_02232843.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211728|ref|ZP_02237763.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167402334|ref|ZP_02307802.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419876|ref|ZP_02311629.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424140|ref|ZP_02315893.1| outer membrane protein A [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170024855|ref|YP_001721360.1| outer membrane protein A [Yersinia pseudotuberculosis YPIII]
gi|186894876|ref|YP_001871988.1| outer membrane protein A [Yersinia pseudotuberculosis PB1/+]
gi|218928581|ref|YP_002346456.1| outer membrane protein A [Yersinia pestis CO92]
gi|229841410|ref|ZP_04461569.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843520|ref|ZP_04463663.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. India 195]
gi|229894379|ref|ZP_04509562.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis Pestoides A]
gi|270486903|ref|ZP_06203977.1| outer membrane protein A [Yersinia pestis KIM D27]
gi|294503419|ref|YP_003567481.1| putative outer membrane porin A protein [Yersinia pestis Z176003]
gi|55976558|sp|Q8ZG77|OMPA_YERPE RecName: Full=Outer membrane protein A; Flags: Precursor
gi|55977792|sp|P38399|OMPA_YERPS RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|51589075|emb|CAH20693.1| putative outer membrane porin A protein [Yersinia
pseudotuberculosis IP 32953]
gi|108776353|gb|ABG18872.1| outer membrane porin A protein [Yersinia pestis Nepal516]
gi|108778637|gb|ABG12695.1| putative outer membrane porin A protein [Yersinia pestis Antiqua]
gi|115347192|emb|CAL20086.1| putative outer membrane porin A protein [Yersinia pestis CO92]
gi|145210519|gb|ABP39926.1| outer membrane porin A protein [Yersinia pestis Pestoides F]
gi|149290964|gb|EDM41039.1| putative outer membrane porin A protein [Yersinia pestis CA88-4125]
gi|162351366|gb|ABX85314.1| outer membrane protein A [Yersinia pestis Angola]
gi|165911957|gb|EDR30601.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923673|gb|EDR40805.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989112|gb|EDR41413.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207499|gb|EDR51979.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962617|gb|EDR58638.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048300|gb|EDR59708.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056989|gb|EDR66752.1| outer membrane protein A [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169751389|gb|ACA68907.1| OmpA domain protein transmembrane region-containing protein
[Yersinia pseudotuberculosis YPIII]
gi|186697902|gb|ACC88531.1| OmpA domain protein transmembrane region-containing protein
[Yersinia pseudotuberculosis PB1/+]
gi|229689128|gb|EEO81191.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697776|gb|EEO87823.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229703777|gb|EEO90793.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis Pestoides A]
gi|262361462|gb|ACY58183.1| putative outer membrane porin A protein [Yersinia pestis D106004]
gi|262365389|gb|ACY61946.1| putative outer membrane porin A protein [Yersinia pestis D182038]
gi|270335407|gb|EFA46184.1| outer membrane protein A [Yersinia pestis KIM D27]
gi|294353878|gb|ADE64219.1| putative outer membrane porin A protein [Yersinia pestis Z176003]
gi|320015699|gb|ADV99270.1| outer membrane protein A [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 353
Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 51/191 (26%), Gaps = 26/191 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + IN G G G+ Q + G
Sbjct: 28 WYTGGKLGWSQYQ-DTGSIINNDGPTHKDQLGAGAFFGY--QANQY-LGFEMGYDWLGRM 83
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVESDNSKN 171
K + K Y V L GG + S +
Sbjct: 84 PYKGDINNGAFKAQGV-QLAAKLSYPVAQDLDVYTRLGGLVW------RADAKGSFDGGL 136
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G S ++ +G +Y + + Y+++ N D E V + +
Sbjct: 137 DRASGHDTGVSPLVALGAEYAWTKNWATRMEYQWV----------NNIGDRETVGARPDN 186
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 187 GLLSVGVSYRF 197
>gi|110635494|ref|YP_675702.1| porin, opacity type [Mesorhizobium sp. BNC1]
gi|110286478|gb|ABG64537.1| porin, opacity type [Chelativorans sp. BNC1]
Length = 282
Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 63/251 (25%), Gaps = 32/251 (12%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPL-- 72
+++ + + DLY+P + L + G Y+ I +
Sbjct: 12 VALALATSANGADLYVPPEAPLPPPPVIEQQPVSVG-----GWYLRGDIGYRWSDLRGTE 66
Query: 73 ----ADTINRKTYNSLLPNGL-GIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEKY 126
+ + +G + G Q+ F + D
Sbjct: 67 YITYGPPPGTSEFTTTELDGAMSLGGGIGYQITRHFRTDLTADY-WFDSDFRGTTAGFCG 125
Query: 127 FIYGDVVLKAGY--------------SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ ++ Y + Y G GGA + L + +
Sbjct: 126 GVPCTSTDRSSYSALLLMANAYVDLGTYYGFTPYVGAGIGGARIKWDRL-RNTIGDDDFY 184
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH-HIHSVNNSNAKSDVERVDRKGNA 231
+ L G Y + ++ L A YRY + D N
Sbjct: 185 HDGGKEWRFAWSLMAGTSYCLTQNLQLDAGYRYTRIQGGRMFEFGSGVGP--GFDDGFNV 242
Query: 232 HIASLGINMHF 242
H A G+ F
Sbjct: 243 HEARAGLRYSF 253
>gi|7188820|gb|AAF37888.1|AF234270_1 outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 249
Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 26/190 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 28 WYAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVESDNSKNA 172
+ Y G + K GY + L GG +S+
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGGP 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 136 STKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNG 185
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 186 LLSVGVSYRF 195
>gi|126734487|ref|ZP_01750234.1| outer membrane protein, putative [Roseobacter sp. CCS2]
gi|126717353|gb|EBA14217.1| outer membrane protein, putative [Roseobacter sp. CCS2]
Length = 175
Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 51/190 (26%), Gaps = 37/190 (19%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G Y G I ++ + GI G+N+Q V+G
Sbjct: 23 DWTGPYAGFQIGGS------DIDVDGAAELTGDGPSYGIFAGYNVQNGAIVYGGEIDYDV 76
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + ++ + + G + L YG G A
Sbjct: 77 TEYEIAGGA--QEVDSTTRLKGRIGTELGGGLAYGTAGVVW------------------A 116
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G + ++G+G D V ++++ A D D
Sbjct: 117 TSPGLGDDNGYLVGVGYDLPVTQNMTVGAEILQHEFE-----------DYNDTDLDVGVT 165
Query: 233 IASLGINMHF 242
++ F
Sbjct: 166 TFKARVSFSF 175
>gi|317047599|ref|YP_004115247.1| OmpA domain-containing protein transmembrane region-containing
protein [Pantoea sp. At-9b]
gi|316949216|gb|ADU68691.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. At-9b]
Length = 356
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 53/192 (27%), Gaps = 26/192 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + N G G LG+ Q + G
Sbjct: 28 WYTGAKLGWSQYHDTGYYGNGYENNNGPTHESQLGAGAFLGY--QANPY-LGFELGYDWL 84
Query: 114 K---DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + K + K Y + L + + N+
Sbjct: 85 GRMPNKGSEINGAFKAQGV-QLAAKLSYPITDDLD------VYTRLGGMVWRADSTQNNN 137
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ G S + +G++Y + + + Y+++ N D V + +
Sbjct: 138 GVRISDHDTGVSPLAAVGVEYALTKNWATRLDYQWV----------NNIGDAGTVGARPD 187
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 188 NSMLSVGVSYRF 199
>gi|300923993|ref|ZP_07139995.1| OmpA-like transmembrane domain protein [Escherichia coli MS 182-1]
gi|300419772|gb|EFK03083.1| OmpA-like transmembrane domain protein [Escherichia coli MS 182-1]
Length = 248
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 66/223 (29%), Gaps = 36/223 (16%)
Query: 55 SGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHNI--QLEDF 102
SG Y+ + + +G GI G++ Q
Sbjct: 27 SGFYLTGKAGASVVSLSDQRFLSGDEEETSKYKGGDDHDTVFSG-GIAAGYDFYPQFSIP 85
Query: 103 VFGINCHTTAAKDDSTFYRLKEKYFI--------------YGDVVLKAGYSVDS---LLI 145
V K DS + K K ++L A Y +
Sbjct: 86 VRTELEFYARGKADSKYNIDKGKGSWSDGYWRDDLKNEVSLNTLMLNAYYDFRNDSAFTP 145
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISL 199
+ G G A + + D GR S LG G+ Y V DI+L
Sbjct: 146 WVSAGIGYARIHQKTTGISTWDYGYGYSGRESLSRSGSADNFAWSLGAGIRYDVTPDIAL 205
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 206 DLSYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDILLGVTYNF 248
>gi|46251212|gb|AAS84577.1| truncated Omp25b [Brucella canis]
Length = 120
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + L+D + G+ G+N +
Sbjct: 29 QEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSD-EDTSIRVKPDGFLGGLYAGYNFDMG 87
Query: 101 -DFVFGINCHTTAAKDDSTFYRLKEKYF 127
+FV G++ T D++
Sbjct: 88 NNFVLGVDGDITYNDLDASHSDTDPDLD 115
>gi|320577122|gb|ADW54070.1| outer membrane protein A [Sodalis glossinidius]
Length = 358
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 27/195 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G + + P G G LG+ Q + G
Sbjct: 28 WYTGGKLGWSQYHDTGFYGNGFDNRIANGPTRDDQLGAGAFLGY--QANPY-LGFELGYD 84
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ K + K Y + D L IY G ++ + K D
Sbjct: 85 WLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWRADSKGAYD 139
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
N + G S + +GL+Y + + Y+++ N D V
Sbjct: 140 NGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNIGDAGTVGT 189
Query: 228 KGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 190 RPDNSMLSVGVSYRF 204
>gi|85059008|ref|YP_454710.1| outer membrane protein A [Sodalis glossinidius str. 'morsitans']
gi|84779528|dbj|BAE74305.1| outer membrane protein A precursor [Sodalis glossinidius str.
'morsitans']
Length = 356
Score = 61.4 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 27/195 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G + + P G G LG+ Q + G
Sbjct: 28 WYTGGKLGWSQYHDTGFYGNGFDNRIANGPTRDDQLGAGAFLGY--QANPY-LGFELGYD 84
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ K + K Y + D L IY G ++ + K D
Sbjct: 85 WLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWRADSKGAYD 139
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
N + G S + +GL+Y + + Y+++ N D V
Sbjct: 140 NGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNIGDAGTVGT 189
Query: 228 KGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 190 RPDNSMLSVGVSYRF 204
>gi|213580658|ref|ZP_03362484.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 296
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 28/191 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 52 WYAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 106
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVESDNSKN 171
K + K GY + L GG +S+
Sbjct: 107 PYKGDNTNGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGG 158
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 159 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDN 208
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 209 GLLSVGVSYRF 219
>gi|224714311|gb|ACN62150.1| outer membrane protein A [Haemophilus parasuis]
Length = 367
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 64/206 (31%), Gaps = 31/206 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYVINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S + + +S+VLG G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY----SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 196
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 197 AKENRRATYNYSPDSHSVTAGISYRF 222
>gi|251788834|ref|YP_003003555.1| outer membrane protein A [Dickeya zeae Ech1591]
gi|247537455|gb|ACT06076.1| OmpA domain protein transmembrane region-containing protein
[Dickeya zeae Ech1591]
Length = 355
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 57/190 (30%), Gaps = 28/190 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G + + N+ G G G+ Q + G
Sbjct: 28 WYAGGKLGWSQYHDSGLNGNGYNVTNAAQNQLGAGAFGGY--QANPY-LGFEMGYDWLGR 84
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ + G + K Y + D + +Y GGF + + D
Sbjct: 85 MKYNGGNQGSFKAQGIQLAAKLSYPIVDDVDVYTRLGGFVWRADSHDNSGLNDHD----- 139
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G S + +G++Y + + + Y+++ N D V + +
Sbjct: 140 ------TGVSPLAAVGVEYAITKNWATRLDYQWV----------NNIGDASTVGGRPDNG 183
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 184 LLSVGVSYRF 193
>gi|268592764|ref|ZP_06126985.1| adhesin/virulence factor Hek [Providencia rettgeri DSM 1131]
gi|291311541|gb|EFE51994.1| adhesin/virulence factor Hek [Providencia rettgeri DSM 1131]
Length = 244
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 71/233 (30%), Gaps = 34/233 (14%)
Query: 42 NNVEYQDDEYGIWSGNYVGLHIS------------RLYETHPLADTINRKTYNSLLPNGL 89
++ + I +G YV + + + G
Sbjct: 14 VSLPAFANAGDIKTGLYVTGKMGASIVQLSGQQFIYSGYADAGDNGTKNGDSHRTSVFGG 73
Query: 90 GIELGHNI--QLEDFVFGINCHTTAAKDDSTFYRLKEKYFI-------------YGDVVL 134
G+ LG++ Q + V TA ++ Y ++++ +++
Sbjct: 74 GLALGYDFSSQFDVPVR-AELEFTARDKANSAYNIRDRVRNGVHQTRDIKNQVKLNTLMV 132
Query: 135 KAGYSV---DSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
Y + + Y G + + + S++ + + +G G+
Sbjct: 133 NGYYDIKNSSNFTPYVSVGLGYAAVDFKTTRADAYTPGLSQHDTHTHTANNFAWSVGAGV 192
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y +N D + SYRY+ + + + K A+ LG+ F
Sbjct: 193 NYAINDDWDMGLSYRYLDAGKADITTTVGDGE-NTSKVKVKANDILLGLTYRF 244
>gi|299773255|gb|ADJ38702.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 64/206 (31%), Gaps = 31/206 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYVINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S + + +S+VLG G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY----SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 196
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 197 AKENRRATYNYSPDSHSVTAGISYRF 222
>gi|167856409|ref|ZP_02479133.1| outer membrane protein P5 precursor [Haemophilus parasuis 29755]
gi|167852469|gb|EDS23759.1| outer membrane protein P5 precursor [Haemophilus parasuis 29755]
gi|209968896|gb|ACJ02809.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968900|gb|ACJ02811.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968904|gb|ACJ02813.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968916|gb|ACJ02819.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968932|gb|ACJ02827.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968960|gb|ACJ02841.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968964|gb|ACJ02843.1| outer membrane protein P5 [Haemophilus parasuis]
gi|222831781|gb|ACJ23250.2| OmpA [Haemophilus parasuis]
gi|224714297|gb|ACN62143.1| outer membrane protein A [Haemophilus parasuis]
gi|224714299|gb|ACN62144.1| outer membrane protein A [Haemophilus parasuis]
gi|224714301|gb|ACN62145.1| outer membrane protein A [Haemophilus parasuis]
gi|224714309|gb|ACN62149.1| outer membrane protein A [Haemophilus parasuis]
gi|224714313|gb|ACN62151.1| outer membrane protein A [Haemophilus parasuis]
gi|224714315|gb|ACN62152.1| outer membrane protein A [Haemophilus parasuis]
gi|224714323|gb|ACN62156.1| outer membrane protein A [Haemophilus parasuis]
gi|224714325|gb|ACN62157.1| outer membrane protein A [Haemophilus parasuis]
gi|224714327|gb|ACN62158.1| outer membrane protein A [Haemophilus parasuis]
gi|224714329|gb|ACN62159.1| outer membrane protein A [Haemophilus parasuis]
gi|224714331|gb|ACN62160.1| outer membrane protein A [Haemophilus parasuis]
gi|224714333|gb|ACN62161.1| outer membrane protein A [Haemophilus parasuis]
gi|299773239|gb|ADJ38694.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773269|gb|ADJ38709.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270735|gb|ADQ55768.1| OmpA [Haemophilus parasuis]
gi|312270737|gb|ADQ55769.1| OmpA [Haemophilus parasuis]
gi|312270739|gb|ADQ55770.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 64/206 (31%), Gaps = 31/206 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYVINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S + + +S+VLG G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY----SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 196
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 197 AKENRRATYNYSPDSHSVTAGISYRF 222
>gi|89052837|ref|YP_508288.1| hypothetical protein Jann_0346 [Jannaschia sp. CCS1]
gi|88862386|gb|ABD53263.1| hypothetical protein Jann_0346 [Jannaschia sp. CCS1]
Length = 196
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 51/175 (29%), Gaps = 16/175 (9%)
Query: 30 LPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL 89
LP F G W+G ++G+ + + D+ + L
Sbjct: 6 LPLLAMAFASPVAAQSSLPSSEGGWAGGHLGIQLGMPISSSLTFDSA-PGIESELDGMSG 64
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVV--LKAGYSVDSLLIYG 147
G+++G Q FV+G ++ + +AGY + L YG
Sbjct: 65 GVQIGFRRQTNAFVYGGEAAFLVSEPVIEQMGAPDVDVRVTTTRLGAQAGYDLGRFLPYG 124
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
G D+ D G+G++Y + S+
Sbjct: 125 TLGVARMTFQDTVGFG-------------DTSSFGTFAGLGVEYQLGESTSVGLQ 166
>gi|46397593|gb|AAS91729.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 63/210 (30%), Gaps = 40/210 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ L G + I +G+
Sbjct: 27 FYVGAKAGWATFHNDVNQFNSKYA---LDERYAGGPTAYGINRNSVTYGVFGGYQIID-- 81
Query: 117 STFYRLKEKYFIYGDVVLKA-----------------------GYSVDSLL-IYGMGGFG 152
++ Y +G V Y V S L +YG G
Sbjct: 82 --NLAVELGYDYFGRVRGNVQVDEQDSKAVKHTAHGTHLSLKPSYEVVSGLDVYGKVGAA 139
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ E ++ +S++LG GL+Y + ++ Y+++ + +
Sbjct: 140 LVRNDYKNYVDQEKSHNL---------KTSLLLGAGLEYAITPALAARLEYQWLSNVGNF 190
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + V + + H S G+ F
Sbjct: 191 NKAESKENRLRNVTYRPDIHSVSAGLVYRF 220
>gi|70931144|gb|AAZ15807.1| heme-binding protein [Bartonella vinsonii subsp. berkhoffii]
Length = 182
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 52/184 (28%), Gaps = 51/184 (27%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
++++ + + A D+ +P ++ + W+G Y+G + +A
Sbjct: 3 VIALISTSTAQAADIVVPHEV----VSPRVTPIVSPSTFSWTGFYLGGQVGNFSSKVEIA 58
Query: 74 D------TINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAK------------ 114
D + GI G NI+L + + G+ A
Sbjct: 59 DSGKKNEFFGKDQTPKPSGFMGGIYTGSNIELGNNLMLGVETDAVWADRGDTKTLSTKEL 118
Query: 115 ---------------------------DDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIY 146
D+ Y K G + G++ + ++ Y
Sbjct: 119 EGDDLEDFNNTFTDAGIKLGGDEKFVVGDTGSYSFTYKEKWSGATRARTGFAAANCIMPY 178
Query: 147 GMGG 150
GG
Sbjct: 179 VAGG 182
>gi|218663593|ref|ZP_03519523.1| putative heat resistant agglutinin 1 [Rhizobium etli IE4771]
Length = 278
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 74/262 (28%), Gaps = 39/262 (14%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+ ++++ ++ + D I + +G Y+ + +
Sbjct: 5 LSGILAALLIATNAYSADFAPAEPIPEQP--------PEVTVTEATGWYLRGDVGYAFTD 56
Query: 70 HPLADTINRKT------YNSLLPNGLGIELGHNIQLEDFV-------FGINCHTTAAKDD 116
A ++ L + I G Q+ ++ + +
Sbjct: 57 LRGARYFQGSNATEVDFDDADLDDAWTIGGGVGYQINSYLRTDLTFDYLTQADFRGSTVG 116
Query: 117 STFYRLK----------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL----- 161
+ L Y + + + G + + Y G GG+YV +L
Sbjct: 117 QCGFPLVDCTSSDRSSLTAYTLLANAYVDLG-TYGYVTPYVGAGIGGSYVKWKNLRNVAC 175
Query: 162 -EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + + G + L G V +I YRY+ ++ A +
Sbjct: 176 ADDGSFCDDQVTHGGKGNWRFTYALMAGASVDVTCNIKADVGYRYLHIDGGNM-FGYADN 234
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D+ + H A +G F
Sbjct: 235 GGPGRDKGLSVHEARVGARYLF 256
>gi|299773263|gb|ADJ38706.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 64/206 (31%), Gaps = 31/206 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYVINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S + + +S+VLG G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY----SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 196
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 197 AKENRRATYNYSPDSHSVTAGISYRF 222
>gi|212212223|ref|YP_002303159.1| hypothetical exported membrane spanning protein [Coxiella burnetii
CbuG_Q212]
gi|212010633|gb|ACJ18014.1| hypothetical exported membrane spanning protein [Coxiella burnetii
CbuG_Q212]
Length = 259
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/209 (11%), Positives = 65/209 (31%), Gaps = 31/209 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD 116
Y G ++ + ++ G +G + + G+ ++
Sbjct: 56 YQGTYLGGSFTVPIGSNV-------HQNGYTAGGHIGLRYYFSNPWFLGLEFAAIGNSEN 108
Query: 117 STFY---------------RLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVID-- 158
+T + + D+ + G ++ +Y GG A +
Sbjct: 109 ATTAESVLAPSPDNLIFNLVNQFRIKSNLDLTAQLGVNITPQTRVYIKGGASYARIRHIL 168
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN--- 215
+ + + + + ++G GL Y + Y Y + +++
Sbjct: 169 TVFNPATLTPTISLQRTTHKNRWGFLVGFGLGYDFCPWFGIFTEYNYYDYVRVGLDSLSN 228
Query: 216 --SNAKSDVERVDRKGNAHIASLGINMHF 242
N +D + + +A+ LG+N++F
Sbjct: 229 IRPNNGADTYHQNVRVHAYSVLLGVNLNF 257
>gi|161830628|ref|YP_001597252.1| hypothetical protein COXBURSA331_A1574 [Coxiella burnetii RSA 331]
gi|161762495|gb|ABX78137.1| conserved domain protein [Coxiella burnetii RSA 331]
Length = 259
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/209 (11%), Positives = 65/209 (31%), Gaps = 31/209 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD 116
Y G ++ + ++ G +G + + G+ ++
Sbjct: 56 YQGTYLGGSFTVPIGSNV-------HQNGYTAGGHIGLRYYFSNPWFLGLEFAAMGNSEN 108
Query: 117 STFY---------------RLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVID-- 158
+T + + D+ + G ++ +Y GG A +
Sbjct: 109 ATTAESVLAPSPDDLIFNLVNQFRIKSNLDLTAQLGVNITPQTRVYIKGGASYARIRHIL 168
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN--- 215
+ + + + + ++G GL Y + Y Y + +++
Sbjct: 169 TVFNPATLTPTISLQRTTHKNRWGFLVGFGLGYDFFPWFGIFTEYNYYDYGRVGLDSLSN 228
Query: 216 --SNAKSDVERVDRKGNAHIASLGINMHF 242
N +D + + +A+ LG+N++F
Sbjct: 229 IRPNNGADTYHQNVRVHAYSVLLGVNLNF 257
>gi|17861366|gb|AAK61593.1| OmpA [Pasteurella multocida]
Length = 348
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 62/199 (31%), Gaps = 26/199 (13%)
Query: 57 NYVGLHISRLYETHPLA--DTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAA 113
YVG L + +++ ++ S + G+ G+ I F +
Sbjct: 28 FYVGAKAGWASFHDGLNQIEYVSKTSFGSKRNSVTYGVFGGYQITDN---FAVE--LGYD 82
Query: 114 KDDSTFYRLKEKYFIYGDVV---------LKAGYSV-DSLLIYGMGGFGGAYVIDSSLEK 163
R K + LKA Y + D L +Y G
Sbjct: 83 DFGRAKVRANSKTTAFDAAKHTNHGTHLSLKASYPLLDGLDVYARVGAALIRSDYKLYAP 142
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + F S V GL+Y +++L Y+++ ++ ++ +
Sbjct: 143 LINKRLSP---HFKITQVSPVFAGGLEYAFIPELTLRVEYQWVN-NVCKFEYADGQY--- 195
Query: 224 RVDRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 196 -ADFRPDIGSVTAGLSYRF 213
>gi|312965808|ref|ZP_07780034.1| ompA-like transmembrane domain protein [Escherichia coli 2362-75]
gi|331669716|ref|ZP_08370562.1| adhesin/virulence factor Hek [Escherichia coli TA271]
gi|312289051|gb|EFR16945.1| ompA-like transmembrane domain protein [Escherichia coli 2362-75]
gi|331063384|gb|EGI35297.1| adhesin/virulence factor Hek [Escherichia coli TA271]
Length = 248
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 66/223 (29%), Gaps = 36/223 (16%)
Query: 55 SGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHNI--QLEDF 102
SG Y+ + + +G GI G++ Q
Sbjct: 27 SGFYLTGKAGASVVSLSDQRFLSGDEEETSKYKGGDDHDTVFSG-GIAAGYDFYPQFSIP 85
Query: 103 VFGINCHTTAAKDDSTFYRLKEKYFI--------------YGDVVLKAGYSVDS---LLI 145
V K DS + K K ++L A Y +
Sbjct: 86 VRTELEFYARGKADSKYNIDKGKGSWSDGYWRDDLKNEVSLNTLMLNAYYDFRNDSAFTP 145
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISL 199
+ G G A + + D GR S LG G+ Y V DI+L
Sbjct: 146 WVSAGIGYARIHQKTTGISSWDYGYGYSGRESLSRSGSADNFAWSLGAGVRYDVTPDIAL 205
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ SV+ + D + + +H LG+ +F
Sbjct: 206 DLSYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDILLGVTYNF 248
>gi|307132015|ref|YP_003884031.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937]
gi|306529544|gb|ADM99474.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937]
Length = 353
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 57/189 (30%), Gaps = 26/189 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G + N+ G G G+ Q+ + G
Sbjct: 28 WYAGAKLGWSQYHDTGLTGNGYNVTNAAQNQLGAGAFGGY--QVNPY-LGFEMGYDWLGR 84
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + G + K Y + D L IY G +D+ N+
Sbjct: 85 MKYNGGNQGSFKAQGVQLSAKLSYPIVDDLDIYTRLG----------GFVSRTDSHDNSG 134
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G S + +G++Y + + + Y+++ N D V + + +
Sbjct: 135 LNDHDTGVSPLAAVGVEYAITKNWATRLDYQWV----------NNIGDASTVGGRPDNGL 184
Query: 234 ASLGINMHF 242
S+G++ F
Sbjct: 185 LSVGVSYRF 193
>gi|253688926|ref|YP_003018116.1| OmpA domain protein transmembrane region-containing protein
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251755504|gb|ACT13580.1| OmpA domain protein transmembrane region-containing protein
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 366
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 56/196 (28%), Gaps = 25/196 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSL---LPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + N+ G G +G+ Q + G
Sbjct: 28 WYTGGKLGVSQFHDTGFYGNGYTGVNNNPIKSKLGAGAFVGY--QANPY-LGFELGYDWL 84
Query: 114 K------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
S+ + K Y V L +Y G G S
Sbjct: 85 GRMKYAGSTSSAADSASFKAQGIQLAAKLSYPVLPDLDVYTRLG--GMVWRADSHAATSV 142
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ A D G S + IG++Y ++ + + Y+++ + D V
Sbjct: 143 NTGTRADITNDDTGVSPLAAIGVEYAIDKNWATRVDYQWV----------SNIGDAGTVG 192
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 193 ARPDNMLMSVGLSYRF 208
>gi|329755858|gb|AEC04326.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 56/199 (28%), Gaps = 26/199 (13%)
Query: 57 NYVGLHISRLYET---HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
YVG + + + G+ G+ I F +
Sbjct: 28 FYVGAKAGWASFHDGLNQIEYKSKTSFGSKRNSVTYGVFGGYQITDN---FAVE--LGYD 82
Query: 114 KDDSTFYRLKEKYFIYGDVV---------LKAGYSV-DSLLIYGMGGFGGAYVIDSSLEK 163
R K + LKA Y + D L +Y G
Sbjct: 83 DFGRAKVRANSKTTAFDAAKHTNHGTHLSLKASYPLLDGLDVYARVGAALIRSDYKLYAP 142
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + F S V GL+Y +++L Y+++ ++ ++ +
Sbjct: 143 LINKRLSP---HFKITQVSPVFAGGLEYAFIPELTLRVEYQWVN-NVGKFEYADGQY--- 195
Query: 224 RVDRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 196 -ADFRPDIGSVTAGLSYRF 213
>gi|312270751|gb|ADQ55776.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 19/200 (9%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYAKDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY- 145
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S + + +S+VLG G++Y + +++ Y+++ + + ++
Sbjct: 146 ---SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 202
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 203 ATYNYSPDSHSVTAGISYRF 222
>gi|299773285|gb|ADJ38717.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 19/200 (9%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY- 145
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S + + +S+VLG G++Y + +++ Y+++ + + ++
Sbjct: 146 ---SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 202
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 203 ATYNYSPDSHSVTAGISYRF 222
>gi|329755862|gb|AEC04328.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 56/199 (28%), Gaps = 26/199 (13%)
Query: 57 NYVGLHISRLYET---HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
YVG + + + G+ G+ I F +
Sbjct: 28 FYVGAKAGWASFHDGLNQIEYKSKTSFGSKRNSVTYGVFGGYQITDN---FAVE--LGYD 82
Query: 114 KDDSTFYRLKEKYFIYGDVV---------LKAGYSV-DSLLIYGMGGFGGAYVIDSSLEK 163
R K + LKA Y + D L +Y G
Sbjct: 83 DFGRAKVRANSKTTAFDAAKHTNHGTHLSLKASYPLLDGLDVYARVGAALIRSDYKLYAP 142
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + F S V GL+Y +++L Y+++ ++ ++ +
Sbjct: 143 LINKRLSP---HFKITQVSPVFAGGLEYAFIPELTLRVEYQWVN-NVGKFEYADGQY--- 195
Query: 224 RVDRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 196 -ADFRPDIGSVTAGLSYRF 213
>gi|288225947|gb|ADC44458.1| OmpA [Candidatus Erwinia dacicola]
Length = 324
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 58/192 (30%), Gaps = 27/192 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + + + + G G LG+ Q + G
Sbjct: 1 YTGAKLGWSQYHDKGYYGNSYQDNDGPSHESQLGAGAFLGY--QANPY-LGFELGYDWLG 57
Query: 115 -DDSTFYRLKEKYFIYG-DVVLKAGYS-VDSLLIYGM-GGFGGAYVIDSSLEKVESDNSK 170
+ Y++ + G + K Y +D L +Y GG
Sbjct: 58 RMPNKGYQVNGAFKAQGVQLAAKLSYPVMDDLDVYTRLGGIVW-------RVDSTQQVVG 110
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ G S + +G++Y V + + Y+++ N D V + +
Sbjct: 111 GDRISDHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGDAGTVGARSD 160
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 161 NSMLSVGVSYRF 172
>gi|145688456|gb|ABP88969.1| outer membrane protein A [Edwardsiella tarda]
Length = 351
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 57/188 (30%), Gaps = 22/188 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + H ++++ PN LG Q + G
Sbjct: 28 WYVGGKLGWS---HFISNSFEDMGTTKPHPNQLGAGAFFGYQANPY-LGFEMGYDWLGRM 83
Query: 117 STFYRLKEKYFIYG-DVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ K+ G + K Y +D L +Y G G + +
Sbjct: 84 GYTGDVNAKFKSQGVQLAAKLSYPLMDDLDVYTRLG--GMVWRSDIHGAADGGD----YT 137
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S + IG++Y +N D + Y+Y+ N + + +
Sbjct: 138 SSHDTGVSPLAAIGVEYALNKDWATRLDYQYV----------NKVGTRSETGARPDNTML 187
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 188 SLGVVYRF 195
>gi|163758784|ref|ZP_02165871.1| putative heat resistant agglutinin 1 protein [Hoeflea phototrophica
DFL-43]
gi|162284074|gb|EDQ34358.1| putative heat resistant agglutinin 1 protein [Hoeflea phototrophica
DFL-43]
Length = 285
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 53/216 (24%), Gaps = 29/216 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNG------LGIELGHNIQLEDFV----- 103
SG Y+ + + N + N + +G Q+ ++
Sbjct: 50 SGWYLRGDAGYAWNSIETPHYFQGSNANYVGFNTSDLRGSYSVGVGVGYQIRSYLRTDVT 109
Query: 104 --FGINCHTTAAKDDSTFYRLKEKYFIYGDVVL--------KAGYSVDSLLIYGMGGFGG 153
+ + T + + Y YG G GG
Sbjct: 110 LDYFSDADFTGSTRGGCGVAVACTSRDLSTANGLSLLANAYVDFYKHGRFTFYGGAGIGG 169
Query: 154 AYVIDSSLEKVESDNSKNA-------KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+V L ++ + L G V ++ YRY
Sbjct: 170 THVSWDGLSNTSCSDAAPTLCDTTVHHSGDKSWRFTYALMAGASIDVTCNLKADIGYRYR 229
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ A + D+ ++H A G+ F
Sbjct: 230 NISGGKM-FGYALNGGPGYDKGFSSHEARGGLRYSF 264
>gi|330860773|emb|CBX71062.1| outer membrane protein A [Yersinia enterocolitica W22703]
Length = 363
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 53/197 (26%), Gaps = 33/197 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN------GLGIELGHNIQLEDFVFGINCHT 110
Y G + + + T G G LG+ Q + G
Sbjct: 34 WYTGGKLG--WSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY--QANQY-LGFEMGY 88
Query: 111 TAAK---DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVE 165
K + K Y + L GG +
Sbjct: 89 DWLGRMPYKGDVRNGDFKAQGV-QLAAKLSYPIAQDLDLYTRLGGMVW------RADSSA 141
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
D + A+ G S ++ +G +Y + + Y+++ + D V
Sbjct: 142 FDATTGARANNHDTGVSPLVALGAEYAWTKNWATRMEYQWV----------SNIGDKATV 191
Query: 226 DRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 192 GARPDNGMLSVGVSYRF 208
>gi|7188822|gb|AAF37889.1|AF234271_1 outer membrane protein A [Shigella flexneri]
Length = 246
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 59/189 (31%), Gaps = 24/189 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + N T G G G+ Q+ +V G
Sbjct: 28 WYTGAKLGWSQYHDTGFIPNNGPT--HENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ Y G + K GY + D L IY G +++ A
Sbjct: 83 PYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLG------GMVWRADTKANVPGGAS 136
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ G S V G++Y + +I+ Y++ +N D + + + +
Sbjct: 137 FKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDNGL 186
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 187 LSLGVSYRF 195
>gi|271501514|ref|YP_003334540.1| OmpA domain-containing protein transmembrane region-containing
protein [Dickeya dadantii Ech586]
gi|270345069|gb|ACZ77834.1| OmpA domain protein transmembrane region-containing protein
[Dickeya dadantii Ech586]
Length = 354
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 58/190 (30%), Gaps = 28/190 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G + N+ G G G+ Q + G
Sbjct: 28 WYAGGKLGWSQYHDTNLTGNGYNATNAAQNQLGAGAFGGY--QANQY-LGFEMGYDWLGR 84
Query: 116 DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNA 172
+ + G + K Y + D L +Y GGF + + ++D
Sbjct: 85 MKYNGGNQGSFKAQGIQLAAKLSYPIVDDLDVYTRLGGFVWRADSHDNSGRNDND----- 139
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G S + +G++Y + + + Y+++ N D V + +
Sbjct: 140 ------TGVSPLAAVGVEYAITKNWATRLDYQWV----------NNIGDAATVGGRPDNG 183
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 184 LLSVGVSYRF 193
>gi|209968934|gb|ACJ02828.1| outer membrane protein P5 [Haemophilus parasuis]
gi|222831779|gb|ACJ23249.2| OmpA [Haemophilus parasuis]
gi|224714293|gb|ACN62141.1| outer membrane protein A [Haemophilus parasuis]
gi|224714317|gb|ACN62153.1| outer membrane protein A [Haemophilus parasuis]
gi|224714319|gb|ACN62154.1| outer membrane protein A [Haemophilus parasuis]
gi|224714321|gb|ACN62155.1| outer membrane protein A [Haemophilus parasuis]
gi|224714335|gb|ACN62162.1| outer membrane protein A [Haemophilus parasuis]
gi|299773259|gb|ADJ38704.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773265|gb|ADJ38707.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773271|gb|ADJ38710.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773273|gb|ADJ38711.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773275|gb|ADJ38712.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773279|gb|ADJ38714.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773287|gb|ADJ38718.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270747|gb|ADQ55774.1| OmpA [Haemophilus parasuis]
gi|312270749|gb|ADQ55775.1| OmpA [Haemophilus parasuis]
gi|312270753|gb|ADQ55777.1| OmpA [Haemophilus parasuis]
gi|312270755|gb|ADQ55778.1| OmpA [Haemophilus parasuis]
gi|312270757|gb|ADQ55779.1| OmpA [Haemophilus parasuis]
gi|312270759|gb|ADQ55780.1| OmpA [Haemophilus parasuis]
gi|312270761|gb|ADQ55781.1| OmpA [Haemophilus parasuis]
gi|312270763|gb|ADQ55782.1| OmpA [Haemophilus parasuis]
gi|312270765|gb|ADQ55783.1| OmpA [Haemophilus parasuis]
gi|312270767|gb|ADQ55784.1| OmpA [Haemophilus parasuis]
gi|312270769|gb|ADQ55785.1| OmpA [Haemophilus parasuis]
gi|312270771|gb|ADQ55786.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 19/200 (9%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY- 145
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S + + +S+VLG G++Y + +++ Y+++ + + ++
Sbjct: 146 ---SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 202
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 203 ATYNYSPDSHSVTAGISYRF 222
>gi|312270745|gb|ADQ55773.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 19/200 (9%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY- 145
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S + + +S+VLG G++Y + +++ Y+++ + + ++
Sbjct: 146 ---SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAKAKENRR 202
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 203 ATYNYSPDSHSVTAGISYRF 222
>gi|269138621|ref|YP_003295321.1| outer membrane protein A [Edwardsiella tarda EIB202]
gi|267984281|gb|ACY84110.1| outer membrane protein A [Edwardsiella tarda EIB202]
gi|304558635|gb|ADM41299.1| Outer membrane protein A precursor [Edwardsiella tarda FL6-60]
Length = 351
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 57/188 (30%), Gaps = 22/188 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + H ++++ PN LG Q + G
Sbjct: 28 WYVGGKLGWS---HFISNSFEDMGTTKSHPNQLGAGAFFGYQANPY-LGFEMGYDWLGRM 83
Query: 117 STFYRLKEKYFIYG-DVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ K+ G + K Y +D L +Y G G + +
Sbjct: 84 GYTGDVNAKFKSQGVQLAAKLSYPLMDDLDVYTRLG--GMVWRSDIHGAADGGD----YT 137
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S + IG++Y +N D + Y+Y+ N + + +
Sbjct: 138 SSHDTGVSPLAAIGVEYALNKDWATRLDYQYV----------NKVGTRSETGARPDNTML 187
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 188 SLGVVYRF 195
>gi|253720368|gb|ACT33424.1| outer membrane protein A precursor [Edwardsiella tarda]
Length = 351
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 57/188 (30%), Gaps = 22/188 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + H ++++ PN LG Q + G
Sbjct: 28 WYVGGKLGWS---HFISNSFEDMGTTKSHPNQLGAGAFFGYQANPY-LGFEMGYDWLGRM 83
Query: 117 STFYRLKEKYFIYG-DVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ K+ G + K Y +D L +Y G G + +
Sbjct: 84 GYTGDVNAKFKSQGVQLAAKLSYPLMDDLDVYTRLG--GMVWRSDIHGAADGGD----YT 137
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S + IG++Y +N D + Y+Y+ N + + +
Sbjct: 138 SSHDTGVSPLAAIGVEYALNKDWATRLDYQYV----------NKVGTRSETGARPDNTML 187
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 188 SLGVVYRF 195
>gi|86144391|ref|ZP_01062723.1| Outer membrane protein [Vibrio sp. MED222]
gi|85837290|gb|EAQ55402.1| Outer membrane protein [Vibrio sp. MED222]
Length = 353
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 53/192 (27%), Gaps = 45/192 (23%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + D + + + G+ G+N + F + D
Sbjct: 28 YVGAKVGMGWLDSACVDGVKCEDDSVAG----GLYGGYNFSDK---FALELSADYLGDYD 80
Query: 118 TFYRLKEKYFIYGDVVLKAGYSV-------DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
T + Y D ++ S I+ G
Sbjct: 81 TSFNSTGTLKQYSDSIVAISLSPMYRLAIQQKFDIFFKAGPAYIM--------------- 125
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
D + LGIG + D +L Y+Y + N
Sbjct: 126 ----HDDEDDVVLSLGIGAEKQFAEDWALRVEYQYFDDFDDKF------------VQDLN 169
Query: 231 AHIASLGINMHF 242
+++ ++G++ +F
Sbjct: 170 SNLVTVGLSYNF 181
>gi|239758178|gb|ACN65406.2| outer membrane protein A precursor [Edwardsiella tarda]
Length = 351
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 57/188 (30%), Gaps = 22/188 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + H ++++ PN LG Q + G
Sbjct: 28 WYVGGKLGWS---HFISNSFEDMGTTKSHPNQLGAGAFFGYQANPY-LGFEMGYDWLGRM 83
Query: 117 STFYRLKEKYFIYG-DVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ K+ G + K Y +D L +Y G G + +
Sbjct: 84 GYTGDVNAKFKSQGVQLAAKLSYPLMDDLDVYTRLG--GMVWRSDIHGAADGGD----YT 137
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S + IG++Y +N D + Y+Y+ N + + +
Sbjct: 138 SSHDTGVSPLAAIGVEYALNKDWATRLDYQYV----------NKVGTRSETGARPDNTML 187
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 188 SLGVVYRF 195
>gi|299773289|gb|ADJ38719.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 64/206 (31%), Gaps = 31/206 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYVINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S + + +S+VLG G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY----SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 196
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 197 AKENRRAAYNYSQDSHSVTAGISYRF 222
>gi|329755860|gb|AEC04327.1| outer membrane protein A [Pasteurella multocida]
gi|329755868|gb|AEC04331.1| outer membrane protein A [Pasteurella multocida]
gi|329755870|gb|AEC04332.1| outer membrane protein A [Pasteurella multocida]
gi|329755872|gb|AEC04333.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 56/199 (28%), Gaps = 26/199 (13%)
Query: 57 NYVGLHISRLYET---HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
YVG + + + G+ G+ I F +
Sbjct: 28 FYVGAKAGWASFHDGLNQIEYKSKTSFGSKRNSVTYGVFGGYQITDN---FAVE--LGYD 82
Query: 114 KDDSTFYRLKEKYFIYGDVV---------LKAGYSV-DSLLIYGMGGFGGAYVIDSSLEK 163
R K + LKA Y + D L +Y G
Sbjct: 83 DFGRAKVRANSKTTAFDAAKHTNHGTHLSLKASYPLLDGLDVYARVGAALIRSDYKLYAP 142
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + F S V GL+Y +++L Y+++ ++ ++ +
Sbjct: 143 LINKRLSP---HFKITQVSPVFAGGLEYAFIPELTLRVEYQWVN-NVGKFEYADGQY--- 195
Query: 224 RVDRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 196 -ADFRPDIGSVTAGLSYRF 213
>gi|300905951|ref|ZP_07123679.1| outer membrane insertion signal [Escherichia coli MS 84-1]
gi|301302540|ref|ZP_07208670.1| outer membrane insertion signal [Escherichia coli MS 124-1]
gi|300402232|gb|EFJ85770.1| outer membrane insertion signal [Escherichia coli MS 84-1]
gi|300842065|gb|EFK69825.1| outer membrane insertion signal [Escherichia coli MS 124-1]
gi|315255466|gb|EFU35434.1| outer membrane insertion signal [Escherichia coli MS 85-1]
Length = 248
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/230 (16%), Positives = 68/230 (29%), Gaps = 33/230 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELG 94
Q +G YV AD + + G G+ +G
Sbjct: 20 SAQTLADESKTGFYVTGKAGASVMSLSEQRFVDGEGAWADKYKGGDKSDTVF-GAGLAVG 78
Query: 95 HN-IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG-------------DVVLKAGYSV 140
++ Q + + + YRL + G ++L A Y
Sbjct: 79 YDFYQHYNVPVRTEVEFYGRGNAESKYRLSYWESVGGAEFDDAQNKLSVNTLMLNAYYDF 138
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSK-----NAKGRFDGHGSSVVLGIGLDYM 192
+ + G G A V + ++ +A + + LG+G+ Y
Sbjct: 139 RNSSAFTPWISAGLGYARVHHKTSYIYTDNSPAGSEVYSASASKYENNLAWSLGVGVKYD 198
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V D SL SYRY+ ++ + + ++ LG +F
Sbjct: 199 VTQDFSLDLSYRYLDAGDSTLTYKDEDGAKYKSSVDVRSNEFMLGATYNF 248
>gi|299773261|gb|ADJ38705.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773267|gb|ADJ38708.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 19/200 (9%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY- 145
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S + + +S+VLG G++Y + +++ Y+++ + + ++
Sbjct: 146 ---SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 202
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 203 ATYNYSPDSHSVTAGISYRF 222
>gi|118581048|ref|YP_902298.1| surface antigen msp4 family protein [Pelobacter propionicus DSM
2379]
gi|118503758|gb|ABL00241.1| surface antigen msp4 family protein [Pelobacter propionicus DSM
2379]
Length = 222
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/249 (15%), Positives = 69/249 (27%), Gaps = 39/249 (15%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNY------ 58
+ ++++P+ + A + F + Y W G+Y
Sbjct: 2 KRNMIIVAALATLLIPSLARAEPPRPGPYVSWFVGVTVPQDRNAHSYDSW-GSYNDRVEF 60
Query: 59 -----VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
VG + L ++ K V+
Sbjct: 61 DPGIDVGGSAGYDFGYVRLEGELSYKGAEIDS-----------------VYDATSDIRYH 103
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D + Y D+ ++ + Y GG G A + V + +
Sbjct: 104 DLDGSLSAFAVMANCYFDL-----HNDTPVTPYLGGGIGFATLYLDDTSGVSNGVRWSLY 158
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
D + +G G+D +N SL YRY + NA K +H
Sbjct: 159 DSDDDTVFAYQIGAGIDISINRYFSLDVGYRYFATDKGKFDEGNA-----GTRMKFESHN 213
Query: 234 ASLGINMHF 242
A+LG+ F
Sbjct: 214 ATLGLRFKF 222
>gi|315634557|ref|ZP_07889842.1| outer membrane protein P5 [Aggregatibacter segnis ATCC 33393]
gi|315476784|gb|EFU67531.1| outer membrane protein P5 [Aggregatibacter segnis ATCC 33393]
Length = 354
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 55/191 (28%), Gaps = 15/191 (7%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSL-LPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G H L + G+ G+ I +
Sbjct: 37 FYAGAKAGWASVHHGLNQFKDEPGQTVSRNSEAYGVFGGYQITDN---LAVEAGYEYFGR 93
Query: 116 DSTFYRLKEKYFIYG---DVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKN 171
++ + + LK Y V + L +YG G + + + N
Sbjct: 94 AKAKTNGEQHFRHTAHGTTLALKGSYPVLADLDVYGRVGAALIRSDYKFTDGSDVEKYHN 153
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
K S V G++Y + +++L A Y+++ + V +
Sbjct: 154 LK-------VSPVFAAGVEYAILPELALRAEYQWVSRVGNLGKAERKAGVDSDVRYSPDI 206
Query: 232 HIASLGINMHF 242
+LG++ F
Sbjct: 207 GSVALGLSYRF 217
>gi|89073281|ref|ZP_01159811.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
gi|89050991|gb|EAR56455.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
Length = 326
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 51/152 (33%), Gaps = 16/152 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G + T+ + G G+ G+ Q+ + F + T +
Sbjct: 26 WYIGARAGASFLTNMDDAVTSVSEIQDTNFTG-GVFAGY--QVTPW-FALETGYTHLGNA 81
Query: 117 STFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ D+V K Y++ D++ I+ G ++SD
Sbjct: 82 KLDNKQGSYEAQGADLVTKFSYAISDNVDIFAKAGAFYYDWNAIGSGVIKSD-------- 133
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
+G S G GL+Y +N S Y+Y
Sbjct: 134 ---NGWSSTAGAGLEYFINKSFSTRLEYQYYN 162
>gi|299773281|gb|ADJ38715.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 19/200 (9%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY- 145
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S + +S+VLG G++Y + +++ Y+++ + + ++
Sbjct: 146 ---SQTGGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 202
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 203 ATYNYSPDSHSVTAGISYRF 222
>gi|85860266|ref|YP_462468.1| outer membrane protein [Syntrophus aciditrophicus SB]
gi|85723357|gb|ABC78300.1| outer membrane protein [Syntrophus aciditrophicus SB]
Length = 199
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 28/160 (17%)
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAA---KDDSTFYRLKEKY-FIYGDVVLKAGYSVDS 142
LG + G+ + + G D ++K + + +L+ Y
Sbjct: 64 WALGAKKGYVVPAARW-LGAEVEYAFLEKHDIDEPEADFRDKTHNVMANFLLR--YPRGR 120
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+ + G G ++ ++ ESD + + L G++Y + + S +
Sbjct: 121 IYPFAGVGIGFSWAEINANVLEESD-----------NALAWQLITGINYEILPNWSADLA 169
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YRY+ N++ + E VD K H LG+N HF
Sbjct: 170 YRYL----------NSRYENENVDAKDENHAIVLGVNYHF 199
>gi|194450577|ref|YP_002048359.1| heat resistant agglutinin 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194408881|gb|ACF69100.1| heat resistant agglutinin 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
Length = 245
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/230 (16%), Positives = 66/230 (28%), Gaps = 33/230 (14%)
Query: 45 EYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELG 94
Q +G YV AD + + G G+ +G
Sbjct: 17 SAQTLADENKTGFYVTGKAGVSVMSLSEQRFVDGEGAWADKYKGSDKSDTVF-GAGLAVG 75
Query: 95 HN-IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG-------------DVVLKAGYSV 140
++ Q + + + YRL G ++L A Y
Sbjct: 76 YDFYQHYNVPVRTEVEFYGRGNAESKYRLSYWESAGGAEFDDAQNKLSVNTLMLNAYYDF 135
Query: 141 DS---LLIYGMGGFGGAYVIDSSLEKVESDNSK-----NAKGRFDGHGSSVVLGIGLDYM 192
+ + G G A V + ++ +A + + LG G+ Y
Sbjct: 136 RNSSAFTPWISAGLGYARVHHKTSYIYTDNSPAGSEVYSASASKYENNLAWSLGAGVKYD 195
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V D SL SYRY+ ++ + + ++ LG +F
Sbjct: 196 VTQDFSLDLSYRYLDAGDSTLTYKDEDGAKYKSSVDVRSNEFMLGATYNF 245
>gi|224714275|gb|ACN62132.1| outer membrane protein A [Haemophilus parasuis]
Length = 367
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 19/200 (9%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQKFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY- 145
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S + + +S+VLG G++Y + +++ Y+++ + + ++
Sbjct: 146 ---SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 202
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 203 ATYNYSPDSHSVTAGISYRF 222
>gi|89055673|ref|YP_511124.1| outer membrane protein, putative [Jannaschia sp. CCS1]
gi|88865222|gb|ABD56099.1| outer membrane protein putative [Jannaschia sp. CCS1]
Length = 196
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 68/206 (33%), Gaps = 23/206 (11%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ 98
A + + W+G Y + T G G G+N
Sbjct: 12 TAVSATGAAAQDASQWTGFY----AGFATNIISPEFDNSTATTPLQEGTGFGAYGGYNYA 67
Query: 99 LE-DFVFGINCHTTA-AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+FV G + A +T ++ + ++ GY++ + L+YG G+
Sbjct: 68 FGDNFVVGAELGFSGPATFQTTLGANDFEFERVLNARVRGGYAMGNALVYGTLGYQ---- 123
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +A +G +V GIGL+ ++N +S+ Y +
Sbjct: 124 --------TVEYGASAGVSTEGAADGLVYGIGLEMLLNDQVSVRLDY-----TSTHMTPD 170
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ +A+ LG+ +HF
Sbjct: 171 AGTIIGGSAGEQIDANAVGLGVALHF 196
>gi|90579228|ref|ZP_01235038.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90440061|gb|EAS65242.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 326
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 16/152 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + D + T G+ G+ Q+ + F + T +
Sbjct: 26 WYVGARAG-ASHITNMDDAVTSVTKLEDTNFAGGVFAGY--QVTPW-FALETGYTHLGNA 81
Query: 117 STFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ D+V K Y++ DS+ I+ G SD
Sbjct: 82 ELDNKQGSYEAQGADLVTKFSYAISDSVDIFAKAGAFYYDWNAIGSGVSNSD-------- 133
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
+G S G G++Y +N ++S Y+Y
Sbjct: 134 ---NGWSPTAGAGIEYFINKNVSTRLEYQYYN 162
>gi|288225941|gb|ADC44455.1| OmpA [Candidatus Erwinia dacicola]
gi|288225945|gb|ADC44457.1| OmpA [Candidatus Erwinia dacicola]
Length = 324
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 58/192 (30%), Gaps = 27/192 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + + + + G G LG+ Q + G
Sbjct: 1 YTGAKLGWSQYHDKGYYGNSYQDNDGPSHESQLGAGAFLGY--QANPY-LGFELGYDWLG 57
Query: 115 -DDSTFYRLKEKYFIYG-DVVLKAGYS-VDSLLIYGM-GGFGGAYVIDSSLEKVESDNSK 170
+ Y++ + G + K Y +D L +Y GG
Sbjct: 58 RMPNKGYQVNGAFKAQGVQLAAKLSYPVMDDLDVYTRLGGIVW-------RVDSTQQVVG 110
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ G S + +G++Y V + + Y+++ N D V + +
Sbjct: 111 GDRISDHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGDAGTVGARSD 160
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 161 NSMLSVGVSYRF 172
>gi|261213963|ref|ZP_05928244.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260915570|gb|EEX82431.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
Length = 62
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ G G+DY ++ + YRY + + + VE K H LG+
Sbjct: 2 TGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVE-ARNKFKTHDIRLGVAY 60
Query: 241 HF 242
F
Sbjct: 61 KF 62
>gi|49182352|gb|AAT57678.1| OmpA [Pasteurella multocida]
Length = 348
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 62/199 (31%), Gaps = 26/199 (13%)
Query: 57 NYVGLHISRLYETHPLA--DTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAA 113
YVG L + +++ ++ S + G+ G+ I F +
Sbjct: 28 FYVGAKAGWASFHDGLNQIEYVSKTSFGSKRNSVTYGVFGGYQITDN---FAVE--LGYD 82
Query: 114 KDDSTFYRLKEKYFIYGDVV---------LKAGYSV-DSLLIYGMGGFGGAYVIDSSLEK 163
R K + LKA Y + D L +Y G
Sbjct: 83 DFGRAKVRANSKTTAFDAAKHTNHGTHLSLKASYPLLDGLDVYARVGAALIRSDYKLYAP 142
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + F S V GL+Y +++L Y+++ ++ ++ +
Sbjct: 143 LINKRLSP---HFKITQVSPVFAGGLEYAFIPELTLRVEYQWVN-NVGKFEYADGQY--- 195
Query: 224 RVDRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 196 -ADFRPDIGSVTAGLSYRF 213
>gi|312270731|gb|ADQ55766.1| OmpA [Haemophilus parasuis]
gi|312270733|gb|ADQ55767.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 65/206 (31%), Gaps = 31/206 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG H + +N K N +LG N +G+
Sbjct: 28 FYVGAKAGWA-TFHNDINQLNFKYKNDARYATGRTDLGIN--RNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S + + +S+VLG G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY----SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 196
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 197 MKENRRATYNYSPDSHSVTAGISYRF 222
>gi|123441891|ref|YP_001005874.1| outer membrane protein A [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088852|emb|CAL11658.1| putative outer membrane porin A protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 357
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 54/196 (27%), Gaps = 31/196 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN------GLGIELGHNIQLEDFVFGINCHT 110
Y G + + + T G G LG+ Q + G
Sbjct: 28 WYTGGKLG--WSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY--QANQY-LGFEMGY 82
Query: 111 TAAK---DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
K + K Y + L +Y G S+ +
Sbjct: 83 DWLGRMPYKGDVRNGDFKAQGV-QLAAKLSYPIAQDLDLYTRLGGMVWRADSSAFDAATG 141
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D N G S ++ +G +Y + + Y+++ + D V
Sbjct: 142 DRQNN-----HDTGVSPLVALGAEYAWTKNWATRMEYQWV----------SNIGDKATVG 186
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 187 ARPDNGMLSVGVSYRF 202
>gi|37525710|ref|NP_929054.1| outer membrane protein A [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36785139|emb|CAE14068.1| Outer membrane protein A precursor (Outer membrane protein II*)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 368
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 56/195 (28%), Gaps = 28/195 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G + + P G G LG+ Q + G
Sbjct: 28 WYTGGKLGWSQYHDVNFYGNGYTSAIGNGPTHKNQLGAGAFLGY--QANPY-LGFEIGYD 84
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ K + K Y +D L IY G + +
Sbjct: 85 WLGRMPYKGSVNNGAFKAHGFQMAT-KLSYPIMDDLDIYTRLGGMVWRADSKATYSATNT 143
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ KN G S + IG++Y + D + Y+++ N D V
Sbjct: 144 HLKN-----HDTGVSPLAAIGVEYAITKDWATRLDYQWV----------NNIGDAGSVGA 188
Query: 228 KGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 189 RPDNGLLSVGVSYRF 203
>gi|317491503|ref|ZP_07949939.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316921050|gb|EFV42373.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 351
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 21/188 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + H ++IN ++ P+ G Q + G
Sbjct: 28 WYVGGKLGWS---HYYDNSINHFGSTNVRPDQFGGGAFFGYQANPY-LGFEMGYDWLGRM 83
Query: 117 STFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ G + K Y + D L IY G S+ +
Sbjct: 84 EYRGDNNGAFKSQGVQLAAKLSYPIADDLDIYTRLGGMVWRADGSANSATKGRYI----- 138
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ G S + IG++Y +N D + Y+++ + D + + +
Sbjct: 139 DSNDTGVSPLAAIGVEYALNKDWATRLDYQFV----------SNIGDANETAARPDNTLL 188
Query: 235 SLGINMHF 242
S+G+ F
Sbjct: 189 SVGVTYRF 196
>gi|322832273|ref|YP_004212300.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
gi|321167474|gb|ADW73173.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
Length = 358
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 21/191 (10%)
Query: 57 NYVGLHISRL-YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK- 114
Y G + Y A+ N + LG Q + G
Sbjct: 28 WYTGGKLGWSQYHDTGFANAYNGIGNGPTHESQLGAGAFLGYQANQY-LGFEMGYDWLGR 86
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ K + K Y + D L +Y G ++ + K +N N
Sbjct: 87 MPYKGSVNNGAFKAQGV-QLAAKLSYPLTDDLDLYTRLG----GMVWRADAKGNFNNGAN 141
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G S + +G++Y V + + Y+++ N D V + +
Sbjct: 142 GRVSDHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGDAATVGARPDN 191
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 192 AMLSVGVSYRF 202
>gi|238749729|ref|ZP_04611234.1| Outer membrane protein A [Yersinia rohdei ATCC 43380]
gi|238712384|gb|EEQ04597.1| Outer membrane protein A [Yersinia rohdei ATCC 43380]
Length = 358
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 52/195 (26%), Gaps = 29/195 (14%)
Query: 57 NYVGLHISRLY----ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
Y G + T + + G G LG+ Q + G
Sbjct: 28 WYTGGKLGWSQYQDTGTGGIYGDLGNDGPTHKNQLGAGAFLGY--QANQY-LGFEMGYDW 84
Query: 113 AK---DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVESD 167
K + K Y V L GG + D
Sbjct: 85 LGRMPYKGDTRNGDFKAQGV-QLAAKLSYPVAQDLDLYTRLGGLVW------RADSSAFD 137
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
A+ G S ++ +G +Y + + Y+++ + D V
Sbjct: 138 AESGARSSNHDTGVSPLVALGAEYAWTKNWATRMEYQWV----------SNIGDKGTVGA 187
Query: 228 KGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 188 RPDNGMLSVGVSYRF 202
>gi|212709831|ref|ZP_03317959.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM
30120]
gi|212687642|gb|EEB47170.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM
30120]
Length = 357
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 61/194 (31%), Gaps = 29/194 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNG--------LGIELGHNIQLEDFVFGINC 108
Y G + + H + + + G G+ G+ + G
Sbjct: 28 WYTGGKLGWSHYEHAKFTFEDAAGDETSVGTGKKTRDQLGAGLYAGYQY---NQYMGFEM 84
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
F ++K K G V G S+ + L Y + Y +
Sbjct: 85 GYDW------FGKMKYKGDNAGSVSS-MGVSLTTKLSYPVMEDLDVYTRLGGMVYRTEAK 137
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
N G+ G S V +GL+Y + +++ Y+++ + D + +
Sbjct: 138 V-NGVGKETDTGVSPVYALGLEYAITPELATRLDYQWV----------SRMGDKDNIGVS 186
Query: 229 GNAHIASLGINMHF 242
+ + S+G+ F
Sbjct: 187 PDNGMLSVGLAYRF 200
>gi|290473839|ref|YP_003466713.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus bovienii SS-2004]
gi|289173146|emb|CBJ79919.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus bovienii SS-2004]
Length = 373
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 60/199 (30%), Gaps = 27/199 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G + P G G +G+ Q + G
Sbjct: 28 WYTGAKLGWSQYHDVNFYGNGYDNQIGNGPTRKNQLGAGAYVGY--QANPY-LGFELGYD 84
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGF----GGAYVIDSSLEK 163
+ + + K Y +D+L +Y G + ++
Sbjct: 85 WLGRMAYKGSVNNGAFRAQGV-QLAAKLSYPVMDNLDVYTRLGGMVWRADSSATYNANAL 143
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + + + + G S + IG++Y + D++ Y+++ N D
Sbjct: 144 GGAGDKDQRRLKNNDTGVSPLAAIGVEYALTKDLATRLDYQWV----------NNIGDAG 193
Query: 224 RVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 194 SVGARPDNGMLSVGVSYRF 212
>gi|332162167|ref|YP_004298744.1| outer membrane protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318606220|emb|CBY27718.1| outer membrane protein A precursor [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325666397|gb|ADZ43041.1| outer membrane protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 357
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 53/197 (26%), Gaps = 33/197 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN------GLGIELGHNIQLEDFVFGINCHT 110
Y G + + + T G G LG+ Q + G
Sbjct: 28 WYTGGKLG--WSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY--QANQY-LGFEMGY 82
Query: 111 TAAK---DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVE 165
K + K Y + L GG +
Sbjct: 83 DWLGRMPYKGDVRNGDFKAQGV-QLAAKLSYPIAQDLDLYTRLGGMVW------RADSSA 135
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
D + A+ G S ++ +G +Y + + Y+++ + D V
Sbjct: 136 FDATTGARANNHDTGVSPLVALGAEYAWTKNWATRMEYQWV----------SNIGDKATV 185
Query: 226 DRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 186 GARPDNGMLSVGVSYRF 202
>gi|77461250|ref|YP_350757.1| OmpW [Pseudomonas fluorescens Pf0-1]
gi|77385253|gb|ABA76766.1| outer membrane protein W [Pseudomonas fluorescens Pf0-1]
Length = 232
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y GG ++ D + N + + G + +G DYM+ +I L+A R
Sbjct: 135 PYIGGGINYTWIYDEHVGSEAQSNGFSNFKAKNSWGLAWQVGA--DYMLTDNIMLNAQVR 192
Query: 205 YIPHHIHSV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
YI + NN+ A RV+ + I +G+ F
Sbjct: 193 YIDIDTRATVENNAVAPGTRARVNVDVDPFIYMVGLGYKF 232
>gi|238792361|ref|ZP_04635995.1| Outer membrane protein A [Yersinia intermedia ATCC 29909]
gi|238728287|gb|EEQ19807.1| Outer membrane protein A [Yersinia intermedia ATCC 29909]
Length = 358
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 52/197 (26%), Gaps = 33/197 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN------GLGIELGHNIQLEDFVFGINCHT 110
Y G + + + T G G LG+ Q + G
Sbjct: 28 WYTGGKLG--WSQYQDTGTGGIYGDVGNDGPTHKNQLGAGAFLGY--QANQY-LGFEMGY 82
Query: 111 TAAK---DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVE 165
K + K Y V L GG +
Sbjct: 83 DWLGRMPYKGDVNNGAFKAQGV-QLAAKLSYPVAQDLDLYTRLGGMVW------RADSSA 135
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
D + + G S ++ +G +Y + + Y+++ + D V
Sbjct: 136 YDAPTDTRSSNHDTGVSPLVALGAEYAWTKNWATRMEYQWV----------SNIGDRATV 185
Query: 226 DRKGNAHIASLGINMHF 242
+ + + SLG++ F
Sbjct: 186 GARPDNGMLSLGVSYRF 202
>gi|330446544|ref|ZP_08310196.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490735|dbj|GAA04693.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 325
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 59/186 (31%), Gaps = 33/186 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + T+ + + G G+ G+ Q+ + F + T +
Sbjct: 27 WYVGARAGASFLTNMDDAVTSVTEIQNTNFAG-GVFAGY--QVTPW-FALETGYTHLGNA 82
Query: 117 STFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
D+V K + + DSL IY G SD
Sbjct: 83 KLDNGQGSYEAQGADLVTKFSFSATDSLDIYAKAGAFYYDWNAIGSGVTNSD-------- 134
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+G S G GL+Y +N ++S Y+Y DV + H A
Sbjct: 135 ---NGWSPTAGAGLEYFINKNLSTRLEYQYYN-------------DVGG----PDIHFAG 174
Query: 236 LGINMH 241
LG+ H
Sbjct: 175 LGLAYH 180
>gi|312963313|ref|ZP_07777796.1| outer membrane protein [Pseudomonas fluorescens WH6]
gi|311282393|gb|EFQ60991.1| outer membrane protein [Pseudomonas fluorescens WH6]
Length = 232
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 58/188 (30%), Gaps = 27/188 (14%)
Query: 75 TINRKTYNSLLPNGLGIELGHN--IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDV 132
+ +LG N L + V GI + +K K G
Sbjct: 52 PLAGANLGGKATMSSDTQLGLNFAYMLTNHV-GIEL----LAATPFEHDVKIKGTALGAA 106
Query: 133 VLKAG-------------YSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
K G Y +D+ Y G ++ D + S+ +
Sbjct: 107 NGKLGTLKHLPPTLSVVYYPLDNKSAFQPYVGAGINYTWIYDEHVGSRASEAGFSNFKAE 166
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV--NNSNAKSDVERVDRKGNAHIA 234
+ IG DYM+N ++A RYI + NN+ A +V+ + +
Sbjct: 167 NSW--GWAAQIGADYMINDKWMINAQARYIDISTKATVENNAVAPGTRAKVNVDVDPMVY 224
Query: 235 SLGINMHF 242
+GI F
Sbjct: 225 MVGIGYKF 232
>gi|307262353|ref|ZP_07543999.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306867901|gb|EFM99731.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 334
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/211 (14%), Positives = 60/211 (28%), Gaps = 41/211 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + N+ GI +G+ D
Sbjct: 26 FYAGAKAGWASFHDGIEQ--LDSAKNTDRGTKYGIN------RNSVTYGVFGGYQILNQD 77
Query: 117 STFYRLKEKYFIYGDVVL------------------------KAGYSVDSLL-IYGMGGF 151
+ Y +G V K Y V L +YG G
Sbjct: 78 KLGLAAELGYDYFGRVRGSEKPNGKADKKTFRHAAHGATIALKPSYEVLPDLDVYGKVGI 137
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ N+ K + SS++LG G++Y + +++ Y+++ +
Sbjct: 138 ALVNNTYKTF------NAAQEKVKTRRFQSSLILGAGVEYAILPELAARVEYQWLNNAGK 191
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + D + + S G++ F
Sbjct: 192 ASYSTLNRMGAT--DYRSDISSVSAGLSYRF 220
>gi|299773231|gb|ADJ38690.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 370
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 30 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 84
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V S L +YG G
Sbjct: 85 --NLAVELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLSGLDVYGKVGAALVRN 142
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 143 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 196
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 197 MKENRRATYNYSPDSHSVTAGISYRF 222
>gi|219872299|ref|YP_002476674.1| outer membrane protein P5 , heat-modifiable outer membrane protein
[Haemophilus parasuis SH0165]
gi|219692503|gb|ACL33726.1| outer membrane protein P5 precursor, heat-modifiable outer membrane
protein [Haemophilus parasuis SH0165]
gi|253807583|gb|ACT36164.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270777|gb|ADQ55789.1| OmpA [Haemophilus parasuis]
gi|312270779|gb|ADQ55790.1| OmpA [Haemophilus parasuis]
Length = 371
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 66/204 (32%), Gaps = 23/204 (11%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY- 145
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHSVNNSNA 218
S + + +S+VLG G++Y + +++ Y+++ + + +
Sbjct: 146 ---SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSRVGNANKAAQKRGDT 202
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+AH S GI+ F
Sbjct: 203 AMFGPGSTYSPDAHSVSAGISYRF 226
>gi|329755866|gb|AEC04330.1| outer membrane protein A [Pasteurella multocida]
Length = 359
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 58/203 (28%), Gaps = 23/203 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----------GLGIELGHNIQLEDFVFG 105
YVG L + + G+ G+ I V
Sbjct: 28 FYVGAKAGWASFHDGLNQAKYLEAPEAPEAPEATFGFKRNSVTYGVFGGYQITDNFAVEL 87
Query: 106 INCHTTAAKDDSTFYRLKEK-----YFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDS 159
AK K K + LKA Y V D L IY G
Sbjct: 88 GYDDFGRAKLRMAEKDQKAKDAAKHTNHGAHLSLKASYPVLDGLDIYARVGAALIRSDYK 147
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + K R S V GL+Y +++L Y+++ + +
Sbjct: 148 VYDHSDPAKLPQFK-RTHSTQVSPVFAGGLEYAFMPELALPVEYQWVNNVGQVKDVLG-- 204
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
ERVD + + + G++ F
Sbjct: 205 ---ERVDYRPDIGSVTAGLSYRF 224
>gi|227329084|ref|ZP_03833108.1| outer membrane protein A [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 361
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 55/191 (28%), Gaps = 20/191 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSL---LPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + N+ G G +G+ Q + G
Sbjct: 28 WYTGGKLGVSQFHDTGFYGNGYTGVNNNPIKSKLGAGAFVGY--QANPY-LGFELGYDWL 84
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + G + + L Y + Y + ++
Sbjct: 85 GRMK-YAGSTSNVADSASFKAQ-GIQLAAKLSYPVLPDLDVYTRLGGMVWRADSHAAIGG 142
Query: 174 GR--FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G D G S + IG++Y ++ + + Y+++ + D V + +
Sbjct: 143 GDINNDDTGVSPLAAIGVEYAIDKNWATRVDYQWV----------SNIGDAGTVGARPDN 192
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 193 MLMSVGLSYRF 203
>gi|229592859|ref|YP_002874978.1| putative ABC transporter outer membrane exported protein
[Pseudomonas fluorescens SBW25]
gi|229364725|emb|CAY52696.1| putative ABC transport system, outer membrane exported protein
[Pseudomonas fluorescens SBW25]
Length = 232
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 58/188 (30%), Gaps = 27/188 (14%)
Query: 75 TINRKTYNSLLPNGLGIELGHN--IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDV 132
+ +LG N L + V GI + +K K G
Sbjct: 52 PLAGANLGGKATMSSDTQLGLNFAYMLTNHV-GIEL----LAATPFEHDVKIKNTALGAA 106
Query: 133 VLKAG-------------YSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
K G Y +D+ Y G ++ D + SD +
Sbjct: 107 NGKLGTLKHLPPTLSVVYYPLDNKSAFQPYVGAGINYTWIYDEHVGSRASDAGFSNFKAE 166
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV--NNSNAKSDVERVDRKGNAHIA 234
+ IG DYM+N ++A RYI + NN+ + +V+ + +
Sbjct: 167 NSW--GWAAQIGADYMINDKWMINAQARYIDISTKATVDNNALGQGTRAKVNVDVDPMVY 224
Query: 235 SLGINMHF 242
+GI F
Sbjct: 225 MVGIGYKF 232
>gi|322515688|ref|ZP_08068661.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976]
gi|322118233|gb|EFX90525.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976]
Length = 360
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 62/201 (30%), Gaps = 25/201 (12%)
Query: 57 NYVGLHISRLYETHPLA--DTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + D Y + G+ G+ I L G+
Sbjct: 26 FYAGAKAGWASFHDGIEQLDAAKGGKYGINKNSVTYGVFGGYQI-LNQDKLGLATEVGYD 84
Query: 114 ----------KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+D + + LK Y V L +YG G +
Sbjct: 85 YFGRVRGTEKPNDKADKQTFRHAAHGATIALKPSYEVLPNLDVYGKAGIALVNNTYKTF- 143
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI-PHHIHSVNNSNAKSD 221
N+ K + SS++LG G++Y + +++ Y+++ S + N +
Sbjct: 144 -----NAAQEKVKSRRFQSSLILGAGVEYAILPELAARIEYQWLNNAGKASYSKLNRRGA 198
Query: 222 VERVDRKGNAHIASLGINMHF 242
D + + S G++ F
Sbjct: 199 ---TDYRPDISSVSAGLSYRF 216
>gi|126668019|ref|ZP_01738983.1| hypothetical protein MELB17_09768 [Marinobacter sp. ELB17]
gi|126627529|gb|EAZ98162.1| hypothetical protein MELB17_09768 [Marinobacter sp. ELB17]
Length = 211
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/179 (12%), Positives = 53/179 (29%), Gaps = 6/179 (3%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G Y+G T + + + NS G+ ++ + + I + A+
Sbjct: 31 TGFYLGAQTGWNDTTLEGSSSNSLVEGNSASGVSGAAFAGYQAKIPNGILAIEVNAGASS 90
Query: 115 DD----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ T R + + + G + + G G D L +S
Sbjct: 91 AEFEKTETAARQLITSDMSYGISARLGTDIARSTQFY--GLVGYQSTDFELTLEDSTPGS 148
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
A + + +G G+ + +++ + H + + +V
Sbjct: 149 VANFKDSKSSAGASIGFGIQAQITDALAMRVQWTRTLHDEKTFGDLKLDPSTSQVSIGV 207
>gi|294853870|ref|ZP_06794542.1| hypothetical protein BAZG_02852 [Brucella sp. NVSL 07-0026]
gi|294819525|gb|EFG36525.1| hypothetical protein BAZG_02852 [Brucella sp. NVSL 07-0026]
Length = 182
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 46/159 (28%), Gaps = 27/159 (16%)
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGGFGGAYVIDSS 160
+ K +++ + ++ L Y G G AYV +
Sbjct: 23 SYVKSSHGLNPVEDNCHYEDNSKASVWTAMANAYVDLPRVGPLTPYLGAGIGAAYVKYDT 82
Query: 161 LEKVE---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS----- 212
+ E + ++ K FD ++ L G+ Y + + L YRY+ + +
Sbjct: 83 WKTSEICPTCTLQSDKDGFDSWRFAMALMAGVSYDLTDQLKLDLGYRYLRVNGGNAYGYD 142
Query: 213 ---------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D N H G+ F
Sbjct: 143 EQDRQVINQYGQGAGADGPQAKDNGFNIHTVRAGLRYEF 181
>gi|6012949|emb|CAB57308.1| putative outer-membrane protein A [Pectobacterium carotovorum]
Length = 367
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 51/195 (26%), Gaps = 28/195 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSL---LPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + N+ G G +G+ Q + G
Sbjct: 28 WYTGGKLGVSQFHDTGFYGNGYTDVNNNPIKSKLGAGAFVGY--QANPY-LGFEMGYDWL 84
Query: 114 K-----DDSTFYRLKEKYFIYG-DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ G + K Y V L +
Sbjct: 85 GRMKYAGSTANPADSASLKAQGIQLAAKLSYPVLPDLD------VYTRLGGMVWRVDTHA 138
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ D G S + IG++Y ++ + + Y+++ + D V
Sbjct: 139 DRSGNHLNNDDTGVSPLAAIGIEYAIDKNWATRVDYQWV----------SNIGDAGTVGA 188
Query: 228 KGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 189 RPDNMLMSVGLSYRF 203
>gi|294141706|ref|YP_003557684.1| OmpA family protein [Shewanella violacea DSS12]
gi|293328175|dbj|BAJ02906.1| OmpA family protein [Shewanella violacea DSS12]
Length = 335
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/187 (12%), Positives = 46/187 (24%), Gaps = 24/187 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT-AAKD 115
Y+G + + N + G G+ + + +
Sbjct: 21 FYLGAKGGWINYQNACEAQAVDCDAND---SAWGGFAGYQFHRN---WAVETGYNDFGQA 74
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + G + + L + + + +
Sbjct: 75 GAVYPESGLLNEYIGTMKG-----WEFSLKGNLPLTENLDLFGKAGTLRWDGENSGPFSY 129
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
G S ++GIGL+Y + Y+Y S N H S
Sbjct: 130 DSDDGWSPMVGIGLEYKLTPSWVARVEYQYFD------------SVGSDKLGGSNMHFTS 177
Query: 236 LGINMHF 242
LG++ F
Sbjct: 178 LGLSYRF 184
>gi|312270717|gb|ADQ55759.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 VKENRRATYNYSPDSHSVTAGISYRF 220
>gi|329851300|ref|ZP_08266057.1| outer membrane protein, 31 kDa [Asticcacaulis biprosthecum C19]
gi|328840146|gb|EGF89718.1| outer membrane protein, 31 kDa [Asticcacaulis biprosthecum C19]
Length = 231
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/211 (14%), Positives = 56/211 (26%), Gaps = 34/211 (16%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLP-----NGLGIELGHNIQLEDFVFGINCH 109
SG +G+H L+ + + + G+EL H+ Q D VFG+
Sbjct: 32 SGTRIGVHAGYLWGDLEPTSGFDDFGDDHIEGYETDAEVGGVELRHDWQDGDTVFGLYAS 91
Query: 110 TTAAKDDSTFY-----------------RLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGF 151
T + + G + + LIY G
Sbjct: 92 WTGTNAEGGTTIEKTTVDSEGVNISTDHGFDTNLAWLASAGGRVGTVINGNTLIYAQVGA 151
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + + A + G+G+DY + SL + +
Sbjct: 152 ASGRLKIT-------ETGDGAGAKRSVTAYGYAAGVGIDYQITDRWSLGFALQRFELSDV 204
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ K +IA + F
Sbjct: 205 EF----EPDAFSSGEIKTKGNIAMASLGFRF 231
>gi|213027149|ref|ZP_03341596.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 236
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 28/191 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 28 WYAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVESDNSKN 171
K + K GY + L GG +S+
Sbjct: 83 PYKGDNTNGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGMVW-------RADTKSNVPGG 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 135 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGDANTIGTRPDN 184
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 185 GLLSVGVSYRF 195
>gi|110086793|gb|ABG49460.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 345
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 61/191 (31%), Gaps = 15/191 (7%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L +++ L N G+ G+ I V AK
Sbjct: 28 FYAGAKAGWASFHDGLNQFEDQENAQGTLRNSVTYGVFGGYQITDNFAVELGYDDFGRAK 87
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + LKA Y V L IY G S ++ ESD +
Sbjct: 88 LRKGGETVIKHTNHGAHLSLKASYPVLEGLDIYARVGAALIRSDYKSTKRAESDYVMHEH 147
Query: 174 GRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
S V GL+Y + +++L Y+++ + D RVD +
Sbjct: 148 SL----KVSPVFAGGLEYNLPSLPELALRVEYQWVN------KVGRVEKDGSRVDYTPSI 197
Query: 232 HIASLGINMHF 242
+ G++ F
Sbjct: 198 GSVTAGLSYRF 208
>gi|209968962|gb|ACJ02842.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYVINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRYSTTREPVKSHNL------KTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 AKENRRATYNYSPDSHSVTAGISYRF 220
>gi|238763376|ref|ZP_04624340.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638]
gi|238698475|gb|EEP91228.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638]
Length = 358
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 53/196 (27%), Gaps = 31/196 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN------GLGIELGHNIQLEDFVFGINCHT 110
Y G + + + T G G LG+ Q + G
Sbjct: 28 WYTGGKLG--WSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY--QANQY-LGFEMGY 82
Query: 111 TAAK---DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
K + K Y + L +Y G S+
Sbjct: 83 DWLGRMPYKGDVRNGDFKAQGV-QLAAKLSYPIAQDLDLYTRLGGMVWRADSSAFNAASG 141
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ N G S ++ +G +Y + + Y+++ + D V
Sbjct: 142 ERLNN-----HDTGVSPLVALGAEYAWTKNWATRMEYQWV----------SNIGDKATVG 186
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 187 ARPDNGMLSVGVSYRF 202
>gi|83858639|ref|ZP_00952161.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
gi|83853462|gb|EAP91314.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
Length = 355
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 45/194 (23%), Gaps = 15/194 (7%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YV + + LG+ ++
Sbjct: 26 GWYVSGALGYGAPGDVDVSGSLNGEIQGEGDIREKLALGYQW-ANNWRLEGELAHRFNDT 84
Query: 116 DSTFYRLKEKYFI-YGDVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ +L Y D+ Y G G S++ S
Sbjct: 85 GAVGNFENSSSDFQVWSGMLNLIYDFDTGSFWTPYIGAGLGWVQSDISAMGWDTGTYSPA 144
Query: 172 AKG---RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ L G+ + + +++L YRY + + V
Sbjct: 145 STFVTVDDSDATVGYQLIAGIGWELARNLTLDTEYRYFGYGETDYAPNLELGRVGG---- 200
Query: 229 GNAHIASLGINMHF 242
H A +G+ F
Sbjct: 201 ---HEAWIGLRYLF 211
>gi|315121798|ref|YP_004062287.1| outer membrane protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495200|gb|ADR51799.1| outer membrane protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 231
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 67/219 (30%), Gaps = 29/219 (13%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS--RLYET 69
V L++V + A D + R + + + YV Y
Sbjct: 10 VSTLTLVSFSAVQAAD-AVQRPQRRQHASVSRGVVPTVVSAN---RYVYSQQGIEGPYAG 65
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA---------------K 114
+ N + G + G+N+Q DF +G + K
Sbjct: 66 MSIFHERNFSGKDHNKDIGGSLFAGYNVQEGDFFYGAEADARYSHDIASKEHKAARLDQK 125
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
DD+ ++ G + + GY + +++YG G + + + +K
Sbjct: 126 DDAAVSKMYHAADFSGSLRFRGGYEIAAPVVVYGTVGVAAVHKASKAPADAAASPAKAFY 185
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
G+G++ ++ +I YR + S
Sbjct: 186 -------IGGTAGLGVESVLVDNIIGRVEYRATKYSGVS 217
>gi|209968926|gb|ACJ02824.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714285|gb|ACN62137.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 21/200 (10%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRYS 146
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ +S+++G G++Y + +++ Y+++ + + ++
Sbjct: 147 TT------IEPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 200
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 201 ATYNYSPDSHSVTAGISYRF 220
>gi|312270773|gb|ADQ55787.1| OmpA [Haemophilus parasuis]
gi|312270775|gb|ADQ55788.1| OmpA [Haemophilus parasuis]
Length = 371
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 64/210 (30%), Gaps = 35/210 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG H + I+ K N + ++ G N +G+
Sbjct: 28 FYVGAKAGWA-TFHNDINQIDSKYANDARYDATNLKYGIN--RNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHS 212
S + + +S+VLG G++Y + +++ Y+++ + +
Sbjct: 141 DYKLY----SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSRVGNANKAA 196
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +AH S GI+ F
Sbjct: 197 QKRGDTAMFGPGSTYSPDAHSVSAGISYRF 226
>gi|299773291|gb|ADJ38720.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 67/200 (33%), Gaps = 21/200 (10%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K + G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGIARNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRYS 146
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ +S+++G G++Y + +++ Y+++ + + ++
Sbjct: 147 TT------IEPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 200
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 201 ATYNYSPDSHSVTAGISYRF 220
>gi|110635493|ref|YP_675701.1| hypothetical protein Meso_3164 [Mesorhizobium sp. BNC1]
gi|110286477|gb|ABG64536.1| conserved hypothetical protein [Chelativorans sp. BNC1]
Length = 227
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 63/231 (27%), Gaps = 12/231 (5%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
L+++ A P + ++ E + SG Y+ +S
Sbjct: 4 SCSLTLIAAAILFAQ--AEPGRAADYDPPMIIEEAPLVPVEVGSGWYLRGDVSYSVNKSV 61
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG-INCHTTAAKDDSTFYRLKEKYFIYG 130
+ + N +G +G D + IN A D E+ G
Sbjct: 62 YDVDTLA---DDIDNNRIGGSVGVGHHFTDLLRADINVAYIAGDDYDDGVIAAERRVWSG 118
Query: 131 DVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
V + L Y G G Y + + L G+
Sbjct: 119 MVNGYLDLGTFVGLTPYVGAGAGLLYTSHEISGSDPFFTDAFSSIDRQY-EFAYALNAGV 177
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
Y + ++S+ Y+Y+ D V+ + H +G+
Sbjct: 178 SYQMTNNLSVDVGYQYLNSPGTKY----VDVDRGTVEEGVDFHQVKMGLRY 224
>gi|23010810|ref|ZP_00051374.1| COG1024: Enoyl-CoA hydratase/carnithine racemase [Magnetospirillum
magnetotacticum MS-1]
Length = 109
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 10/114 (8%)
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
+ GY+ D L+YG GGF S D LG G++Y
Sbjct: 2 RGRLGYAFDRWLVYGTGGFAYGGGSRSPYAA------SYPYTLPDTARIGYALGGGVEYA 55
Query: 193 VNYDISLSASYRYIPHHIH----SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ IS+ Y+ +V ++ + + + G+N F
Sbjct: 56 LTDHISVKVEGLYVDLGRRGTGTTVYDATVPAYYGTGRSESGFGVVRGGLNYKF 109
>gi|209968954|gb|ACJ02838.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYVINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRYSTTREPVKSHNL------KTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 AKENRRATYNYSPDSHSVTAGISYRF 220
>gi|299773251|gb|ADJ38700.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYVINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRYSTTREPVKSHNL------KTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 AKENRRATYNYSPDSHSVTAGISYRF 220
>gi|299773235|gb|ADJ38692.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYENDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 VKENRRATYNYSPDSHSVTAGISYRF 220
>gi|209968902|gb|ACJ02812.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968930|gb|ACJ02826.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714289|gb|ACN62139.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYVINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRYSTTREPVKSHNL------KTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 AKENRRATYNYSPDSHSVTAGISYRF 220
>gi|312270725|gb|ADQ55763.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG H + +N K N G+ I +G+
Sbjct: 28 FYVGAKAGWA-TFHNDINQLNFKYKNDARYATSA--NGYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRYSTTREPVKSHNL------NTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 AKENRRATYNYSPDSHSVTAGISYRF 220
>gi|299773249|gb|ADJ38699.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYANDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 MKENRRATYNYSPDSHSVTAGISYRF 220
>gi|239950055|gb|ACS36759.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 242
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 64/206 (31%), Gaps = 31/206 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 14 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYVINRNSVTYGVFGGYQIID-- 68
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 69 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 126
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S + + +S+VLG G++Y + +++ Y+++ + +
Sbjct: 127 DYKRY----SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 182
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 183 AKENRRATYNYSPDSHSVTAGISYRF 208
>gi|299773229|gb|ADJ38689.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYENDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 VKENRRATYNYSPDSHSVTAGISYRF 220
>gi|224714303|gb|ACN62146.1| outer membrane protein A [Haemophilus parasuis]
gi|224714305|gb|ACN62147.1| outer membrane protein A [Haemophilus parasuis]
gi|224714307|gb|ACN62148.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 VKENRRATYNYSPDSHSVTAGISYRF 220
>gi|299773241|gb|ADJ38695.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773245|gb|ADJ38697.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 62/210 (29%), Gaps = 40/210 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYENDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVLK-------------------AGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGKEQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHS 212
+ + + +S++LG G++Y + +++ Y+++ + +
Sbjct: 141 DYKFYDTED---------KAHNLKTSLLLGAGVEYAILPELAFRVEYQWLSRVGNANKAA 191
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +AH S GI+ F
Sbjct: 192 QKRGDTAMFGPGSTYSPDAHSVSAGISYRF 221
>gi|209968928|gb|ACJ02825.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714287|gb|ACN62138.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYANDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 MKENRRATYNYSPDSHSVTAGISYRF 220
>gi|312270741|gb|ADQ55771.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 67/200 (33%), Gaps = 21/200 (10%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + + D N K + G+ G+ I +++
Sbjct: 28 FYVGAKAGWVSFHNDINQIDSKYASDARYDATNLKYGINRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRYS 146
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ +S+++G G++Y + +++ Y+++ + + ++
Sbjct: 147 TTTEPVKSHNL------KTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 200
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 201 ATYNYSPDSHSVTAGISYRF 220
>gi|312270721|gb|ADQ55761.1| OmpA [Haemophilus parasuis]
gi|312270723|gb|ADQ55762.1| OmpA [Haemophilus parasuis]
Length = 366
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYENDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 VKENRRATYNYSPDSHSVTAGISYRF 220
>gi|299773233|gb|ADJ38691.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 368
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG H + +N K N G+ I +G+
Sbjct: 28 FYVGAKAGWA-TFHNDINQLNFKYKNDARYATSA--NGYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V S L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLSGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 MKENRRATYNYSPDSHSVTAGISYRF 220
>gi|209968918|gb|ACJ02820.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968922|gb|ACJ02822.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714277|gb|ACN62133.1| outer membrane protein A [Haemophilus parasuis]
gi|224714281|gb|ACN62135.1| outer membrane protein A [Haemophilus parasuis]
Length = 367
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 62/210 (29%), Gaps = 40/210 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYENDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVLK-------------------AGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGKEQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHS 212
+ + + +S++LG G++Y + +++ Y+++ + +
Sbjct: 141 DYKFYDTED---------KAHNLKTSLLLGAGVEYAILPELAFRVEYQWLSRVGNANKAA 191
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +AH S GI+ F
Sbjct: 192 QKRGDTAMFGPGSTYSPDAHSVSAGISYRF 221
>gi|148975688|ref|ZP_01812519.1| outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145964761|gb|EDK30013.1| outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 355
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 55/192 (28%), Gaps = 45/192 (23%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + D++N + + G+ G+N + + D
Sbjct: 28 YVGAKVGMGWLDSACVDSVNCEDDSVAG----GLYGGYNFTDN---IALELNADYLGDYD 80
Query: 118 TFYRLKEKYFIYGDVVLKAGYSV-------DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
T + Y D ++ S ++ G
Sbjct: 81 TSFNYNGTTQRYSDSIIAISLSPMYRLAIKQEFDVFFKAGPAYIM--------------- 125
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
D + LGIG + D ++ Y+Y + + N
Sbjct: 126 ----HDDEDDVVLALGIGAEKQFADDWAVRLEYQYFDDFDDKII------------QNLN 169
Query: 231 AHIASLGINMHF 242
+++ ++G++ +F
Sbjct: 170 SNLVTVGLSYNF 181
>gi|227111637|ref|ZP_03825293.1| outer membrane protein A [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 361
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 52/195 (26%), Gaps = 28/195 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSL---LPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + N+ G G +G+ Q + G
Sbjct: 28 WYTGGKLGVSQFHDTGFYGNGYTGINNNPIKSKLGAGAFVGY--QANPY-LGFELGYDWL 84
Query: 114 K-----DDSTFYRLKEKYFIYG-DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + G + K Y V L + +
Sbjct: 85 GRMKYAGSTANAADSASFKAQGIQLAAKLSYPVLPDLD------VYSRLGGMVWRADSHA 138
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
D G S + +G++Y ++ + + Y+++ + D V
Sbjct: 139 AIGGGDINNDDTGVSPLAAVGVEYAIDKNWAARVDYQWV----------SNIGDAGTVGA 188
Query: 228 KGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 189 RPDNLLMSVGLSYRF 203
>gi|209968912|gb|ACJ02817.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714271|gb|ACN62130.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYENDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 VKENRRATYNYSPDSHSVTAGISYRF 220
>gi|48249486|gb|AAT40989.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 345
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 60/191 (31%), Gaps = 15/191 (7%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L N + L N G+ G+ I V AK
Sbjct: 28 FYAGAKAGWASFHDGLNQFENSQNAYGTLRNSVTYGVFGGYQITDNFAVELGYDDFGRAK 87
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + LKA Y V L +Y G S ++ ESD +
Sbjct: 88 LRKGGETVIKHTNHGAHLSLKASYPVLEGLDVYARVGAALIRSDYKSTKRAESDYVMHEH 147
Query: 174 GRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
S V GL+Y + +++L Y+++ + D RVD +
Sbjct: 148 SL----KVSPVFAGGLEYNLPSLPELALRVEYQWVN------KVGRGEKDGSRVDYTPSI 197
Query: 232 HIASLGINMHF 242
+ G++ F
Sbjct: 198 GSVTAGLSYRF 208
>gi|312270727|gb|ADQ55764.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V S L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLSGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 AKENRRATYNYSPDSHSVTAGISYRF 220
>gi|299773253|gb|ADJ38701.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 66/200 (33%), Gaps = 21/200 (10%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRYS 146
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ +S+++G G++Y + +++ Y+++ + + ++
Sbjct: 147 TTREPVKSHNL------KTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 200
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 201 ATYNYSPDSHSVTAGISYRF 220
>gi|222149649|ref|YP_002550606.1| outer surface protein [Agrobacterium vitis S4]
gi|221736631|gb|ACM37594.1| outer surface protein [Agrobacterium vitis S4]
Length = 272
Score = 58.7 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/260 (13%), Positives = 62/260 (23%), Gaps = 36/260 (13%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+F + ++ A D+Y P + + SG Y+ I +
Sbjct: 5 LLALFAAGILAGPVSAADVYQPEPPPQ--------DAPEVRVADTSGWYLRGDIGYSFNQ 56
Query: 70 HPLADTINRKTYNSLLPN------GLGIELGHNIQLED-------FVFGINCHTTAAKDD 116
A N + + G Q+ F + T +
Sbjct: 57 LRGAKFYQGSNANQASFDRHDLDNSYTLGAGVGYQINSHLRTDVTFDYLGKSDFTGSTRG 116
Query: 117 STFYRLKEKYFIYGDVVLKAGYS--------VDSLLIYGMGGFGGAYVIDSSL------E 162
S + + S Y G GG+YV L +
Sbjct: 117 SCGVSSACTSRDLSSLQAYTLMANAYVDLGTYASFTPYVGAGIGGSYVKWDKLKNTSCAD 176
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ G + L G + D YR+ S+ +
Sbjct: 177 DGSGCDGSEEHGGRGSWRFAYQLMFGTSIDLTCDWKADIGYRFRQTTGGSM-FGYKANGG 235
Query: 223 ERVDRKGNAHIASLGINMHF 242
D+ +H +G F
Sbjct: 236 PGSDKGFYSHDLHVGARYQF 255
>gi|238789280|ref|ZP_04633067.1| Outer membrane protein A [Yersinia frederiksenii ATCC 33641]
gi|238722612|gb|EEQ14265.1| Outer membrane protein A [Yersinia frederiksenii ATCC 33641]
Length = 357
Score = 58.7 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 52/197 (26%), Gaps = 33/197 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN------GLGIELGHNIQLEDFVFGINCHT 110
Y G + + + T G G LG+ Q + G
Sbjct: 28 WYTGGKLG--WSQYQDTGTGGIYGDVGNDGPTHKNQLGAGAFLGY--QANQY-LGFEMGY 82
Query: 111 TAAK---DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGFGGAYVIDSSLEKVE 165
K + K Y + L GG +
Sbjct: 83 DWLGRMPYKGDVRNGDFKAQGV-QLAAKLSYPIAQDLDLYTRLGGMVW------RADSSA 135
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
D + + G S ++ +G +Y + + Y+++ + D V
Sbjct: 136 FDATSGLRSNNHDTGVSPLVALGAEYAWTKNWATRMEYQWV----------SNIGDKATV 185
Query: 226 DRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 186 GARPDNGMLSVGVSYRF 202
>gi|293396726|ref|ZP_06641002.1| outer membrane protein A [Serratia odorifera DSM 4582]
gi|291420990|gb|EFE94243.1| outer membrane protein A [Serratia odorifera DSM 4582]
Length = 364
Score = 58.7 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 54/195 (27%), Gaps = 28/195 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G + + P G G LG+ Q + G
Sbjct: 34 WYTGAKLGWSQYHDVGFYGNGYEKGIGNGPTHESQLGAGAFLGY--QANQY-LGFELGYD 90
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ K + K Y + D L IY G + +
Sbjct: 91 WLGRMPYKGSVNNGAFKAQGV-QLAAKLSYPIADDLDIYTRLGGMIWRADSKANYGRTGE 149
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
N G S + +G++Y + + + Y+++ + D V
Sbjct: 150 RLSN-----HDTGVSPLAAVGVEYALTKNWATRLDYQFV----------SNIGDAGTVGA 194
Query: 228 KGNAHIASLGINMHF 242
+ + + SLG++ F
Sbjct: 195 RPDNTMLSLGVSYRF 209
>gi|84394243|ref|ZP_00992970.1| Outer membrane protein [Vibrio splendidus 12B01]
gi|84375118|gb|EAP92038.1| Outer membrane protein [Vibrio splendidus 12B01]
Length = 356
Score = 58.7 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 31/185 (16%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + D G GI G+N + FGI + D
Sbjct: 28 YVGAKVGMGWLDSACVDGTKCDDD----AIGAGIYSGYNFSDK---FGIELSSDFLGDYK 80
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T + + D ++ + V ++ + + G D
Sbjct: 81 TSFTKNGTTSQFS----------DPIIAISLTPMYRLAVQQEFDVFFKAGPAYISHGGED 130
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
S GIGL+ ++ D ++ Y+Y + + N+++ S+G
Sbjct: 131 DVVLS--AGIGLEKQLSSDWAVRVEYQYFDDFDDNY------------VQDLNSNLLSVG 176
Query: 238 INMHF 242
++ +F
Sbjct: 177 VSYNF 181
>gi|209968936|gb|ACJ02829.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968942|gb|ACJ02832.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968946|gb|ACJ02834.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968956|gb|ACJ02839.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968958|gb|ACJ02840.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714295|gb|ACN62142.1| outer membrane protein A [Haemophilus parasuis]
gi|312270743|gb|ADQ55772.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 58.7 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 66/200 (33%), Gaps = 21/200 (10%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRYS 146
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ +S+++G G++Y + +++ Y+++ + + ++
Sbjct: 147 TTREPVKSHNL------KTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 200
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 201 ATYNYSPDSHSVTAGISYRF 220
>gi|312270719|gb|ADQ55760.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 61/206 (29%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ + G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYENDVRYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 VKENRRATYNYSPDSHSVTAGISYRF 220
>gi|320540573|ref|ZP_08040223.1| putative outer membrane protein A (3a;II*;G;d) [Serratia symbiotica
str. Tucson]
gi|320029504|gb|EFW11533.1| putative outer membrane protein A (3a;II*;G;d) [Serratia symbiotica
str. Tucson]
Length = 382
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 56/195 (28%), Gaps = 29/195 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G + + P G G LG+ Q + G
Sbjct: 53 WYTGAKLGWSQYHDVGFYGNGYQDGIGNGPTHKNELGAGAFLGY--QANQY-LGFELGYD 109
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ K + K Y + D+L IY G +
Sbjct: 110 WLGRMPYKGSVNNGAFKAQGV-QLAAKLSYPIVDNLDIYTRLGGMVWRADSKASYDNVRR 168
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
S N G S + +G++Y + +++ Y+++ + D V
Sbjct: 169 LSAN------DTGVSPLAAVGVEYALTKNLATRLDYQFV----------SNIGDAGTVGA 212
Query: 228 KGNAHIASLGINMHF 242
+ + + SLG++ F
Sbjct: 213 RPDNTMLSLGVSYRF 227
>gi|299773257|gb|ADJ38703.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 66/200 (33%), Gaps = 21/200 (10%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRYS 146
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ +S+++G G++Y + +++ Y+++ + + ++
Sbjct: 147 TTREPVKSHNL------KTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 200
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 201 ATYNYSPDSHSVTAGISYRF 220
>gi|209968924|gb|ACJ02823.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 62/210 (29%), Gaps = 40/210 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG H + +N K N G+ I +G+
Sbjct: 28 FYVGAKAGWA-TFHNDINQLNFKYKNDARYATSA--NGYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHS 212
+ + + +S++LG G++Y + +++ Y+++ + +
Sbjct: 141 DYKFYDTED---------KAHNLKTSLLLGAGVEYAILPELAFRVEYQWLSRVGNANKAA 191
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +AH S GI+ F
Sbjct: 192 QKRGDTAMFGPGSTYSPDAHSVSAGISYRF 221
>gi|299773247|gb|ADJ38698.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 369
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 60/210 (28%), Gaps = 37/210 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYENDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVLK-------------------AGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGKEQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHS 212
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSRVGNANKAA 194
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +AH S GI+ F
Sbjct: 195 QKRGDTAMFGPGSTYSPDAHSVSAGISYRF 224
>gi|159185869|ref|NP_356912.2| outer surface protein [Agrobacterium tumefaciens str. C58]
gi|159141003|gb|AAK89697.2| outer surface protein [Agrobacterium tumefaciens str. C58]
Length = 281
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 64/258 (24%), Gaps = 36/258 (13%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
++ ++A DLY + V+ + SG Y+ + + A
Sbjct: 9 LAVLLTGTSAIAADLYQAEPAPAY------VDAPEVTVTQASGWYLRGDVGYSFNKLRGA 62
Query: 74 DTINRKTYNSLL-------PNGLGIELGHNIQLEDFV-------FGINCHTTAAKDDSTF 119
L + I G Q ++ + +
Sbjct: 63 HYYQGGPGGYLQDFDTATIKDSYVIGGGVGYQFNNYFRSDVTLDYMGKSDFRGSTSGFCG 122
Query: 120 Y----RLKEKYFIYGDVVLKAGY-----SVDSLLIYGMGGFGGAYVI------DSSLEKV 164
+ L A + S+ Y GG GG+YV S
Sbjct: 123 SVPGRCVSADLSSLSAYTLMANAYVDLGTYGSITPYVGGGIGGSYVKWDKLRNTSCSVNG 182
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ G + L G V ++ YR+ + + +
Sbjct: 183 LGCDPTTEHGGKGKWRFAYALMAGASIDVTCNLKADIGYRFRHINKGDM-FAYENGGGPG 241
Query: 225 VDRKGNAHIASLGINMHF 242
D+ +H +G F
Sbjct: 242 RDKGLYSHEVRVGGRYVF 259
>gi|209968906|gb|ACJ02814.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968938|gb|ACJ02830.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968940|gb|ACJ02831.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968948|gb|ACJ02835.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968950|gb|ACJ02836.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968952|gb|ACJ02837.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270695|gb|ADQ55748.1| OmpA [Haemophilus parasuis]
gi|312270697|gb|ADQ55749.1| OmpA [Haemophilus parasuis]
gi|312270699|gb|ADQ55750.1| OmpA [Haemophilus parasuis]
gi|312270701|gb|ADQ55751.1| OmpA [Haemophilus parasuis]
gi|312270703|gb|ADQ55752.1| OmpA [Haemophilus parasuis]
gi|312270705|gb|ADQ55753.1| OmpA [Haemophilus parasuis]
gi|312270707|gb|ADQ55754.1| OmpA [Haemophilus parasuis]
gi|312270709|gb|ADQ55755.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V S L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLSGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 MKENRRATYNYSPDSHSVTAGISYRF 220
>gi|209886341|ref|YP_002290198.1| outer membrane protein, 31 kDa [Oligotropha carboxidovorans OM5]
gi|209874537|gb|ACI94333.1| outer membrane protein, 31 kDa [Oligotropha carboxidovorans OM5]
Length = 113
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 40/117 (34%), Gaps = 12/117 (10%)
Query: 133 VLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
KAG++V+ LLIY GG A + + + S V+G G +
Sbjct: 2 RGKAGFAVNPQLLIYATGGAAFAGTRATDTFIDGTHDITA-----KATSSGWVVGAGGEV 56
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNA--KSDVERVDRKGNAH----IASLGINMHF 242
+ +S Y Y S ++ + +AH I +N HF
Sbjct: 57 KLARQVSFGFEYLYADFGNKSYAFDSSHLSGGFAGLPLAIDAHLKLNIVKASLNYHF 113
>gi|209968920|gb|ACJ02821.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/206 (12%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V S L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLSGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 MKENRRATYNYSPDSHSVTAGISYRF 220
>gi|291086630|ref|ZP_06356308.2| outer membrane protein A [Citrobacter youngae ATCC 29220]
gi|291067496|gb|EFE05605.1| outer membrane protein A [Citrobacter youngae ATCC 29220]
Length = 341
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 62/187 (33%), Gaps = 27/187 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y G ++ + D N + G+G +G+ QL + F + D
Sbjct: 32 GLYAGANMGWSQYYNN-NDFTRGHENNDI---GVGGYIGY--QLNPY-FSLENGILILGD 84
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
Y + K Y V + IY G + + +S
Sbjct: 85 AEGDKNSSMTVQGY-QLSGKISYPVSNTDIYTRLGGMWYRSDYTRDDTNDSKV------- 136
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
G G + ++ +G++Y NY+I+ Y+++ + + + S
Sbjct: 137 --GTGIAPLISLGIEYAWNYNITSRVEYQWV----------GNIKNDAATSANVDNGLLS 184
Query: 236 LGINMHF 242
+G + HF
Sbjct: 185 VGFSYHF 191
>gi|149190763|ref|ZP_01869029.1| outer membrane protein OmpA [Vibrio shilonii AK1]
gi|148835419|gb|EDL52390.1| outer membrane protein OmpA [Vibrio shilonii AK1]
Length = 338
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 49/193 (25%), Gaps = 44/193 (22%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G + + + T + G+ G++ + +
Sbjct: 24 GFYLGGRLGGSQLSDACNVSAAPCTDSGFS---AGVYTGYDW---NDYIALEFAYDWLGS 77
Query: 116 DSTFYRLKEKYFIYGDVVL-----KAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
T + +Y ++ K Y D I+G G D +
Sbjct: 78 YETSFVDGAEYRRDANLSALTLAPKFSYPFNDEWAIFGKVGAAYTMYDDRKSTALMG--- 134
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G+GL+Y S Y+ I N+
Sbjct: 135 ----------------GVGLEYDFATAWSGRLEYQRINDAKDDWFNT------------- 165
Query: 230 NAHIASLGINMHF 242
+ LGI+ F
Sbjct: 166 DVDTFWLGISYSF 178
>gi|254511664|ref|ZP_05123731.1| outer membrane protein, putative [Rhodobacteraceae bacterium KLH11]
gi|221535375|gb|EEE38363.1| outer membrane protein, putative [Rhodobacteraceae bacterium KLH11]
Length = 172
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 48/179 (26%), Gaps = 29/179 (16%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G YVG + ++ L +G++ +FV G
Sbjct: 23 DWTGAYVGFSFGYADVDGSGGAGGSDGSFGPL--------IGYDYDFGNFVLGGELEYNR 74
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D + + L+ GY L Y + G A +
Sbjct: 75 LNLD--LGASEGSLDSMSRLKLRGGYDFGPALGYVVVGTARASTSGN------------- 119
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
++ V GIG+ Y + +S + + ++V +
Sbjct: 120 ------SDTAAVYGIGVAYPLGDRFVISGEALRQDFENVPRSGGDLDANVFNLRTTFRF 172
>gi|209968908|gb|ACJ02815.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714283|gb|ACN62136.1| outer membrane protein A [Haemophilus parasuis]
Length = 369
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 60/210 (28%), Gaps = 37/210 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYENDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVLK-------------------AGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGKEQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHS 212
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSRVGNANKAA 194
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +AH S GI+ F
Sbjct: 195 QKRGDTAMFGPGSTYSPDAHSVSAGISYRF 224
>gi|332704398|ref|ZP_08424486.1| OmpA domain protein transmembrane region-containing protein
[Desulfovibrio africanus str. Walvis Bay]
gi|332554547|gb|EGJ51591.1| OmpA domain protein transmembrane region-containing protein
[Desulfovibrio africanus str. Walvis Bay]
Length = 219
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 50/199 (25%), Gaps = 17/199 (8%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED-FVFGINCHT 110
G Y+G + + G LG+ +++ F G
Sbjct: 26 GFYIGAKAGLESYDVDVEYDLGGGGSLDDEADDSGFVAGAYLGYGRTIKNVFYLGWETDA 85
Query: 111 TAAKDDSTFYRL------KEKYFIYGDVVLKAG-YSVDSLLIYGMGGFGGAYVIDSSLEK 163
D F V + G D L YG+ G A +
Sbjct: 86 MYHGMDGEFDYYQGHYYESLDMNWSLGVKARLGGVIADRHLAYGLVGLRIAGFDYRNDTG 145
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
D+ + +G G ++ + + A Y + + +
Sbjct: 146 YAVDDE-----EENPVLPGFTVGGGYEFAITKHLIARAEIAYTAYAAYELEYVGGPLSGT 200
Query: 224 RVDRKGNAHIASLGINMHF 242
+ ++G+ +F
Sbjct: 201 EESISPSTLDYTVGLAWNF 219
>gi|299773277|gb|ADJ38713.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 64/200 (32%), Gaps = 19/200 (9%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVAAALVRNDYKR-- 144
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+S+VLG G++Y + +++ Y+++ + + ++
Sbjct: 145 --PPQTGGVPTQPAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKGEAKENRR 202
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 203 ATYNYSPDSHSVTAGISYRF 222
>gi|37498966|gb|AAQ86765.2| hemagglutinin antigen [Avibacterium paragallinarum]
gi|48249488|gb|AAT40990.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 345
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 60/191 (31%), Gaps = 15/191 (7%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L N + L N G+ G+ I V AK
Sbjct: 28 FYAGAKAGWASFHDGLNQFENSQNAYGTLRNSVTYGVFGGYQITDNFAVELGYDDFGRAK 87
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + LKA Y V L +Y G S ++ ESD +
Sbjct: 88 LRKGGETVIKHTNHGAHLSLKASYPVLEGLDVYARVGAALIRSDYKSTKRAESDYVMHEH 147
Query: 174 GRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
S V GL+Y + +++L Y+++ + D RVD +
Sbjct: 148 SL----KVSPVFAGGLEYNLPSLPELALRVEYQWVN------KVGRVEKDGSRVDYTPSI 197
Query: 232 HIASLGINMHF 242
+ G++ F
Sbjct: 198 GSVTAGLSYRF 208
>gi|170750855|ref|YP_001757115.1| hypothetical protein Mrad2831_4466 [Methylobacterium radiotolerans
JCM 2831]
gi|170657377|gb|ACB26432.1| hypothetical protein Mrad2831_4466 [Methylobacterium radiotolerans
JCM 2831]
Length = 210
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 59/191 (30%), Gaps = 21/191 (10%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTIN 77
P + A L+ P + + +D YG W+G+Y L T
Sbjct: 26 AGPAAAQA--LFWPSIGFAPLPSFAWPQMPEDAYGRWTGSYARLSTGYAVSTSR------ 77
Query: 78 RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA-----AKDDSTFYRLKEKYFIYGDV 132
+ S +G E G Q ++GI+ + RL G +
Sbjct: 78 --HFGSYSGPTVGFEGGRMWQEGPILYGISGGFDYLAGLGGNLTPGYGRLAYSNDFAGSL 135
Query: 133 VLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+K G V +L+Y G + S V G+G+++
Sbjct: 136 EVKVGTLVAPDVLVYAKTGALALHQTLRVGPTPGSLP-----FTRQDIAVRPVAGVGVEW 190
Query: 192 MVNYDISLSAS 202
V +SL+
Sbjct: 191 AVTDRLSLAVE 201
>gi|268590120|ref|ZP_06124341.1| outer membrane protein P5 [Providencia rettgeri DSM 1131]
gi|291314389|gb|EFE54842.1| outer membrane protein P5 [Providencia rettgeri DSM 1131]
Length = 363
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/198 (11%), Positives = 50/198 (25%), Gaps = 31/198 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----------NSLLPNGLGIELGHNIQLEDFVFGI 106
Y G + + + T G G G+ + G
Sbjct: 28 WYTGAKLGWSHYEDTSLNPAKTGTDYAGWGTVGNSTDRDTIGAGAYAGYQY---NQYLGF 84
Query: 107 NCHTTA-AKDDSTFYRLKEKYFIYG-DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
K G + K Y + L +
Sbjct: 85 ELGYDWFGKMKYKGAGNSGDLKSMGVSLTTKLSYPIMDDLD------VYTRLGGMVYRTE 138
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + + G + V +GL+Y + + + Y+++ + D +
Sbjct: 139 AKAHQNGQRFKETDTGVAPVYALGLEYAITPEWATRLDYQWV----------SNLGDKDN 188
Query: 225 VDRKGNAHIASLGINMHF 242
+ + + + S+G+ F
Sbjct: 189 IGTRPDNGMLSVGVAYRF 206
>gi|19881365|gb|AAM00925.1|AF491817_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 56/191 (29%), Gaps = 16/191 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L N + + L N G+ G+ I V AK
Sbjct: 28 FYAGAKAGWASFHDGLNQFENSQNADGTLRNSVTYGVFGGYQITDNFAVELGYDDFGRAK 87
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + LKA Y V L +Y G + +
Sbjct: 88 SRQGGETVIKHTNHGAHLSLKASYPVLEGLDVYARVGAALIRSDYKPT-----KRAAPNQ 142
Query: 174 GRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
S V GL+Y + +++L Y+++ + D RVD +
Sbjct: 143 THEHSLKVSPVFAGGLEYNLPSLPELALRVEYQWVN------KVGRVEKDGSRVDYTPSI 196
Query: 232 HIASLGINMHF 242
+ G++ F
Sbjct: 197 GSVTAGLSYRF 207
>gi|299773243|gb|ADJ38696.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG H + +N K N G+ I +G+
Sbjct: 28 FYVGAKAGWA-TFHNDINQLNFKYKNDARYATSA--NGYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V S L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLSGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 MKENRRATYNYSPDSHSVTAGISYRF 220
>gi|161504592|ref|YP_001571704.1| adhesin/invasin PagN [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|160865939|gb|ABX22562.1| hypothetical protein SARI_02706 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 254
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 69/217 (31%), Gaps = 31/217 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLP-----------NGLGIELGHNI--QLE-- 100
G Y+ ++ + G G+ +G++ Q +
Sbjct: 39 GAYITGKAGASVVNLYGINSTLIDDDVVVNGQPKLPDRTKGVFGGGVAIGYDFNDQFQLP 98
Query: 101 -----DFVFGINCHTTAAKDDSTFYR---LKEKYFIYGDVVLKAGY----SVDSLLIYGM 148
D F +D + F + K + + GY + + Y
Sbjct: 99 VRLELDTTFRGETDAKGGQDFTAFDDTVHMNVKNQVRMSTYMVNGYYDFHNSTAFTPYIS 158
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
G G A V + E + N + + GIG Y V +I++ ASY+YI
Sbjct: 159 AGIGLARVKLKNNTMSEDFDI-NETLAASKNNFAWGAGIGAKYAVTDNIAIDASYKYINA 217
Query: 209 HIHSVNNSNAKSDVER---VDRKGNAHIASLGINMHF 242
S++ +N D D K ++ +GI F
Sbjct: 218 GKVSISKNNYAGDEYTSYYADTKAASNDFMIGITYAF 254
>gi|224714291|gb|ACN62140.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 66/200 (33%), Gaps = 21/200 (10%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 86
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 87 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY- 145
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ +S+++G G++Y + +++ Y+++ + + ++
Sbjct: 146 -----FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRR 200
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 201 ATYNYSPDSHSVTAGISYRF 220
>gi|209968910|gb|ACJ02816.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968944|gb|ACJ02833.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714273|gb|ACN62131.1| outer membrane protein A [Haemophilus parasuis]
gi|224714279|gb|ACN62134.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG H + +N K N G+ I +G+
Sbjct: 28 FYVGAKAGWA-TFHNDINQLNFKYKNDARYATSA--NGYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V S L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLSGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 MKENRRATYNYSPDSHSVTAGISYRF 220
>gi|312270729|gb|ADQ55765.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 63/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG H + +N K N +LG N +G+
Sbjct: 28 FYVGAKAGWA-TFHNDINQLNFKYKNDARYATGRTDLGIN--RNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 MKENRRATYNYSPDSHSVTAGISYRF 220
>gi|312270715|gb|ADQ55758.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 23/201 (11%)
Query: 57 NYVGLHISRLYETHPL-------------ADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
YVG + + A + NR N G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSANRYGINRNS-VTYGVFGGYQI-IDNLA 85
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSL 161
+ + + K+ +G + LK Y V S L +YG G
Sbjct: 86 VELGYDYFGRVRGNNQEFREFKHSAHGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY 145
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ +S+++G G++Y + +++ Y+++ + + ++
Sbjct: 146 ------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENR 199
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 200 RATYNYSPDSHSVTAGISYRF 220
>gi|312270711|gb|ADQ55756.1| OmpA [Haemophilus parasuis]
gi|312270713|gb|ADQ55757.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG H + +N K N G+ I +G+
Sbjct: 28 FYVGAKAGWA-TFHNDINQLNFKYKNDARYATSA--NGYGINRNSVTYGVFGGYQIID-- 82
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V S L +YG G
Sbjct: 83 --NLAVELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLSGLDVYGKVGAALVRN 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +S+++G G++Y + +++ Y+++ + +
Sbjct: 141 DYKRY------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 195 MKENRRATYNYSPDSHSVTAGISYRF 220
>gi|149190419|ref|ZP_01868691.1| outer membrane protein A [Vibrio shilonii AK1]
gi|148835798|gb|EDL52763.1| outer membrane protein A [Vibrio shilonii AK1]
Length = 343
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 58/205 (28%), Gaps = 36/205 (17%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN-IQ----- 98
E D S Y+G + + + + + LG +G+ Q
Sbjct: 24 ETSADSDAFSSHWYLGGKLGAMKYQNACEEWAVDCDGTDV---ALGGFIGYQVWQHWGLE 80
Query: 99 LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
L FG + I VV + + D+L + G +
Sbjct: 81 LGYLDFG-EAKALYPEGGRVNQYSGSMSGIEMSVVGRISVT-DNLDAFAKAGTLYWQGKN 138
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSN 217
S G + G+GL+Y + + Y+Y+ + SN
Sbjct: 139 S-----------GPTRSLTDDGWAPTAGVGLEYHFSNHWAGRVEYQYVNALGSDKLGGSN 187
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
H+A+LGI F
Sbjct: 188 G-------------HLATLGIVYRF 199
>gi|299773237|gb|ADJ38693.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 362
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 23/201 (11%)
Query: 57 NYVGLHISRLYETHPL-------------ADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
YVG + + A + NR N G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSANRYGINRNSV-TYGVFGGYQI-IDNLA 85
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSL 161
+ + + K+ +G + LK Y V S L +YG G
Sbjct: 86 VELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY 145
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ +S+++G G++Y + +++ Y+++ + + ++
Sbjct: 146 ------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEVKENR 199
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 200 RATYNYSPDSHSVTAGISYRF 220
>gi|260431177|ref|ZP_05785148.1| putative outer membrane protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415005|gb|EEX08264.1| putative outer membrane protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 254
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/188 (12%), Positives = 50/188 (26%), Gaps = 22/188 (11%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD-------- 116
+ L + L G + V+G D
Sbjct: 79 GTFSIGDLNLSGGFGGVRGGWRGVLPARGGRDY-----VYGFEIGYDFVSMDDTVTREIS 133
Query: 117 STFYRLKEKYFIYGDVVLKAGYS--VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
T R + V K G + S+L + G + +S ++
Sbjct: 134 GTTVRGGSEISDIAAVRFKNGLTNPSGSVLYFVTLGLVQGDIKTTSSIAS---SATTTSV 190
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
D + IG ++ ++ + S++ Y+ ++ + S +
Sbjct: 191 ENDDRRTGFSASIGAEHQLSENWSITGELEYVQFQSEVIDFGSGISTKSTPSYR----SL 246
Query: 235 SLGINMHF 242
G+N F
Sbjct: 247 RFGLNYRF 254
>gi|209968914|gb|ACJ02818.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 23/201 (11%)
Query: 57 NYVGLHISRLYETHPL-------------ADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
YVG + + A + NR N G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQLNSKYKNDARYATSANRYGINRNSV-TYGVFGGYQI-IDNLA 85
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSL 161
+ + + K+ +G + LK Y V S L +YG G
Sbjct: 86 VELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY 145
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ +S+++G G++Y + +++ Y+++ + + ++
Sbjct: 146 ------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEVKENR 199
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 200 RATYNYSPDSHSVTAGISYRF 220
>gi|120536907|ref|YP_956965.1| hypothetical protein Maqu_4199 [Marinobacter aquaeolei VT8]
gi|120326741|gb|ABM21050.1| hypothetical protein Maqu_4199 [Marinobacter aquaeolei VT8]
Length = 228
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 64/203 (31%), Gaps = 19/203 (9%)
Query: 57 NYVGLHISRLYETHPL-------ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
Y GL+I L +T S G LG + GI +
Sbjct: 28 FYTGLNIGWNASEIELEGSTEANNNTFAGDQTASASGPAFGGILGVKFPISTGFVGIEAN 87
Query: 110 TTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLL---------IYGMGGFGGAYVIDS 159
+ + + + + + GY + ++L IYG+ G+
Sbjct: 88 VADSSAEYEATETVNGQQTLDQSISSDLGYGLSAILAFNVNAHSQIYGIAGYQMTDFELK 147
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
S + + +D GIG++ M+ +S + + + A
Sbjct: 148 SS-SRDLASGDITNDGYDDTLGGYRFGIGMETMLTSALSARLEWTQTNYSSEDFDIDMAD 206
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
E ++ K + + ++GI HF
Sbjct: 207 GTTE-MEMKNSENRITIGIIGHF 228
>gi|70732833|ref|YP_262600.1| OmpW family outer membrane protein [Pseudomonas fluorescens Pf-5]
gi|68347132|gb|AAY94738.1| outer membrane protein, OmpW family [Pseudomonas fluorescens Pf-5]
Length = 232
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G ++ D + + + G + +G DYM+ +I ++A R
Sbjct: 135 PYVGAGINYTWIYDEHVGSRAQSEGFDNFRAKNSWGLAWQIGA--DYMLTDNIMINAQAR 192
Query: 205 YIPHHIHSV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
YI + NN+ A +V+ + + +G+ F
Sbjct: 193 YIDIDTRAYVDNNALAAGTRAKVNVDVDPWVYMVGLGYKF 232
>gi|255262225|ref|ZP_05341567.1| outer membrane protein [Thalassiobium sp. R2A62]
gi|255104560|gb|EET47234.1| outer membrane protein [Thalassiobium sp. R2A62]
Length = 194
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 47/172 (27%), Gaps = 11/172 (6%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
+ E W+G Y GL + + K L + + +G+
Sbjct: 12 DVPPVASIVTPAEVSDWTGFYAGLQFDAVAGKTERDSLSSFKA--DLEGSIVSGFVGYRW 69
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ ++ G D Y G Y ++S L +G G
Sbjct: 70 AVGRYIVGAELDIALNGDGRMIYT----EGGLGPERP---YDINSALRFGGEFGGELGGG 122
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
+ + + FD +GIG DY V I + Y
Sbjct: 123 LAYMGLGFTMLDVKLDSEFDD--QGYYVGIGYDYFVTDSIMVGVEINYHDFG 172
>gi|298504885|gb|ADI83608.1| porin, putative [Geobacter sulfurreducens KN400]
Length = 224
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 61/203 (30%), Gaps = 26/203 (12%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNG-----------LGIELGHNIQLEDFVFGINC 108
G ++S + +D N +G G++ F
Sbjct: 28 GGYVSGFFGVSAASDADVTSIDNQFGDVFNDRVEYDPNIYVGGTGGYD--FGHFRLEGEL 85
Query: 109 HTTAAK----DDSTFYRLKEKYFIYGDVVLKAGYSVD-----SLLIYGMGGFGGAYVIDS 159
A+ D T +R + G + A VD + Y GG G A + S
Sbjct: 86 SYKHAEISSITDDTGFRFRGVDGNLGALAFMANAFVDLHNNTPVTPYFGGGIGFAVLSLS 145
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
++ D + G G++ +N +SL YRY + ++
Sbjct: 146 DTYGNDTSGRLLLYPEDDTTVFAYQAGGGVEIAINPSLSLDLGYRYFGTTKGTFDSD--- 202
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ K +H +G + F
Sbjct: 203 -WITTTKLKYESHNGMVGFRVKF 224
>gi|213950522|gb|ACJ54534.1| outer membrane protein A [Haemophilus parasuis]
Length = 305
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 19/200 (9%)
Query: 57 NYVGLHISRLYETHPLA------------DTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
YVG + + D N K S G+ G+ I +++
Sbjct: 3 FYVGAKAGWATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQI-IDNLAV 61
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
+ + K+ +G + LK Y V + L +YG G
Sbjct: 62 ELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY- 120
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S + + +S+VLG G++Y + +++ Y+++ + + ++
Sbjct: 121 ---SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRR 177
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 178 ATYNYSPDSHSVTAGISYRF 197
>gi|39995873|ref|NP_951824.1| tia invasion determinant-related protein [Geobacter sulfurreducens
PCA]
gi|39982637|gb|AAR34097.1| tia invasion determinant-related protein [Geobacter sulfurreducens
PCA]
Length = 224
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 61/203 (30%), Gaps = 26/203 (12%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNG-----------LGIELGHNIQLEDFVFGINC 108
G ++S + +D N +G G++ F
Sbjct: 28 GGYVSGFFGVSAASDADVTSIDNQFGDVFNDRVEYDPNIYVGGTGGYD--FGHFRLEGEL 85
Query: 109 HTTAAK----DDSTFYRLKEKYFIYGDVVLKAGYSVD-----SLLIYGMGGFGGAYVIDS 159
A+ D T +R + G + A VD + Y GG G A + S
Sbjct: 86 SYKHAEISSITDDTGFRFRGVDGNLGALAFMANAFVDLHNNTPVTPYFGGGIGFAVLSLS 145
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
++ D + G G++ +N +SL YRY + ++
Sbjct: 146 DTYGSDTSGRLLLYPEDDTTVFAYQAGGGVEIAINPSLSLDLGYRYFGTTKGTFDSD--- 202
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ K +H +G + F
Sbjct: 203 -WITTTKLKYESHNGMVGFRVKF 224
>gi|28900171|ref|NP_799826.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
gi|153838350|ref|ZP_01991017.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|260365818|ref|ZP_05778314.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|260880741|ref|ZP_05893096.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|260896549|ref|ZP_05905045.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260899437|ref|ZP_05907832.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|28808482|dbj|BAC61659.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748274|gb|EDM59133.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|308089287|gb|EFO38982.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308092411|gb|EFO42106.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308109244|gb|EFO46784.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308114950|gb|EFO52490.1| outer membrane protein [Vibrio parahaemolyticus K5030]
Length = 204
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/195 (10%), Positives = 50/195 (25%), Gaps = 23/195 (11%)
Query: 58 YVGLHIS-------RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
Y+G I + + + G+ + +
Sbjct: 23 YIGASIGKATFDDISGSIKSNTYNASEKLEVKDNESLSGKVFGGYTF---NEYISLEGAI 79
Query: 111 TAAKDDSTFYRLKEKYFIYG---DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ L G D ++ G V +
Sbjct: 80 GGYDALDGSVVTVGDMKFLAIQPKLTLPIG---DRFNLFAKAGLSYFNAEFKVSNSVLTG 136
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ F + + G+G ++ + +++L + Y+ + AK E+V
Sbjct: 137 DE--GHTTFSETTVTGLYGLGAEFAITKNLALQVEWEYMKPELDV-----AKLGSEKVTV 189
Query: 228 KGNAHIASLGINMHF 242
+ S+G++ F
Sbjct: 190 EAEISAFSVGMSYRF 204
>gi|300023262|ref|YP_003755873.1| hypothetical protein Hden_1749 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525083|gb|ADJ23552.1| hypothetical protein Hden_1749 [Hyphomicrobium denitrificans ATCC
51888]
Length = 240
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 65/219 (29%), Gaps = 38/219 (17%)
Query: 53 IWSGNYVGL--HISRLYETHPLADTIN------RKTYNSLLPNGLGIELGHNIQLEDFVF 104
WS +G + + A + R T +S G+ + N +L++ V
Sbjct: 24 DWSAISIGAYTQLGHFNSSVESATFNDWSVDQVRSTDSSSTNWNGGLTVAANWRLQNAVI 83
Query: 105 GINCHTT-----------AAKDDSTFYRL----------KEKYFIYGDVVLKAGYSVDSL 143
G+ D + V K G+ V
Sbjct: 84 GVAVDYDPFGSTQGLGCLYYWSDGGQSNVFVSDVQSGRCTRDVAWSASFVGKIGWLVSPT 143
Query: 144 L-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+YG+GG+ + V + + + + G G++Y + + ++
Sbjct: 144 TWVYGLGGWTVSRVEQNFEKSFNLE-------QVHATLDGATFGGGIEYRLTENWHVNVE 196
Query: 203 YRYIPHHIHSVNNSNAKSDVERV-DRKGNAHIASLGINM 240
RY + + + D + G+ LG++
Sbjct: 197 LRYTKLNTVEKKTFSEEIDAPQFTKFGGDLETVRLGLSY 235
>gi|209968898|gb|ACJ02810.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 23/201 (11%)
Query: 57 NYVGLHISRLYETHPL-------------ADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
YVG + + A + NR N G+ G+ I +++
Sbjct: 28 FYVGAKAGWATFHNDINQLNFKYKNDARYATSANRYGINRNSV-TYGVFGGYQI-IDNLA 85
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSL 161
+ + + K+ +G + LK Y V S L +YG G
Sbjct: 86 VELGYDYFGRVRGNKQEFREFKHSAHGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY 145
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ +S+++G G++Y + +++ Y+++ + + ++
Sbjct: 146 ------FQTREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENR 199
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ ++H + GI+ F
Sbjct: 200 RATYNYSPDSHSVTAGISYRF 220
>gi|209964174|ref|YP_002297089.1| OmpA family protein (probable proton motor, MotY) [Rhodospirillum
centenum SW]
gi|209957640|gb|ACI98276.1| OmpA family protein (probable proton motor, MotY) [Rhodospirillum
centenum SW]
Length = 355
Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 62/192 (32%), Gaps = 10/192 (5%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG + D R T IE G+ + F FG T
Sbjct: 29 GFYVGAQTGINWLQDTEFDGAIRNTATFDGAWTGVIEGGYRLGNG-FRFGAEVGYTDHTI 87
Query: 116 DSTFYRLKEKYFIYGDVVL-----KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
D + GD+ A Y +D+ + G VI + ++ +
Sbjct: 88 DEIKGGAAGRAGGAGDINAWTFMATAYYDIDTGTAFRPYIGLGGGVIRAKVDGAADVFAA 147
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ + + G+ Y V+ ++ L+ YR++ S + + + D
Sbjct: 148 GNRVSDSDSALAYQVAAGVAYAVSPNLDLTLGYRFL----GSEDLDIRPTGGTQFDTDYQ 203
Query: 231 AHIASLGINMHF 242
+H +G+ F
Sbjct: 204 SHSVLVGVRWTF 215
>gi|88062407|gb|ABD38964.1| Pap31 [Bartonella quintana]
Length = 175
Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 45/182 (24%), Gaps = 54/182 (29%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
++++ + + A D+ W+G Y+G I + +
Sbjct: 3 VIALISASAAQAADVIAT---------HEAAPVITTPNFSWTGFYIGGQIGNFTSDNKIK 53
Query: 74 DTINRKTY------NSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK------------ 114
+ L GI G NI L + G+ A
Sbjct: 54 GLGKETSIFTKGLTPQLSGIVGGIYAGSNIDLGSGLILGVETDAIWADCEATKTSAIRTL 113
Query: 115 -------------------------DDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGM 148
+D+ K G + G+ + D ++ Y
Sbjct: 114 SVPQANSLNDEFKAAGITLKDKFSENDTMSDHYTYKAKWSGATRARIGFSAFDRVMPYFA 173
Query: 149 GG 150
GG
Sbjct: 174 GG 175
>gi|215919179|ref|NP_820396.2| hypothetical protein CBU_1412 [Coxiella burnetii RSA 493]
gi|206584063|gb|AAO90910.2| hypothetical exported protein [Coxiella burnetii RSA 493]
Length = 273
Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
A + D+ G + L +Y GG A +++ +
Sbjct: 126 VSLGAGSTTVPVIDTTLRLKYNFDLTGIFGIDITPALHLYLKGGGSYAKLVEDFAVLQAT 185
Query: 167 DNSKNAKGRFDGHG-SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN-------- 217
++ ++ HG VVLG GL + +SL A Y + + H++N +N
Sbjct: 186 TSASISQQHQTHHGLWGVVLGAGLARDLCRWVSLFAEYDFYDYGNHTLNTANNISVDPVV 245
Query: 218 AKSDVERVDRKG-NAHIASLGINMHF 242
A DV + K A+ GIN++F
Sbjct: 246 APPDVYTQEAKNIRAYTIRAGINVNF 271
>gi|113461178|ref|YP_719247.1| hemagglutinin antigen [Haemophilus somnus 129PT]
gi|112823221|gb|ABI25310.1| hemagglutinin antigen [Haemophilus somnus 129PT]
Length = 355
Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 68/192 (35%), Gaps = 17/192 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNG--LGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L + + N GI G+ Q+ D V +
Sbjct: 39 FYAGAKAGWASFHDGLNQFEDSSQKKGTVRNSVAYGIFGGY--QITDHVAVELGSEYFGQ 96
Query: 115 DDSTFYRLKEKYFIYG-DVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + K+ G + LKA Y V L IYG G ++EK ES
Sbjct: 97 AKGRKDKDEAKHTAQGMQLGLKASYPVLEGLDIYGRVGAALIRSNYLNVEKFESGKDVKN 156
Query: 173 KGRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ S V G++Y + +++L Y+++ V + KS ER+D +
Sbjct: 157 TLK-----VSPVFAAGVEYSLPSLPELALRLEYQWV----KGVGKALKKSSGERLDYTPS 207
Query: 231 AHIASLGINMHF 242
+LG++ F
Sbjct: 208 IGAVTLGLSYRF 219
>gi|119944462|ref|YP_942142.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
gi|119863066|gb|ABM02543.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
Length = 331
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 47/184 (25%), Gaps = 24/184 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + A+ I GI LG+N + + + T +
Sbjct: 29 WYTGARLGGA-HYSDFAENIWTPDNQDQNDLAGGIFLGYNYK--PW-LAVETGYTYLGEA 84
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ V + DSL ++ G + D
Sbjct: 85 QFGNNRSVEQQGIDLVGKFTWQATDSLDVFAKAGGFYYFADGKGEFNTSHDRGLIP---- 140
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
G G++Y N ++S Y+Y + VD N H +
Sbjct: 141 -------TTGAGVEYFFNKNVSARLEYQYYH---------DIDLKDSGVDTSWNTHFYGV 184
Query: 237 GINM 240
+
Sbjct: 185 SLVY 188
>gi|332288152|ref|YP_004419004.1| outer membrane protein A [Gallibacterium anatis UMN179]
gi|330431048|gb|AEC16107.1| outer membrane protein A [Gallibacterium anatis UMN179]
Length = 361
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/205 (14%), Positives = 58/205 (28%), Gaps = 35/205 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-------------GLGIELGHNIQLEDFV 103
Y G + + N ++ G+ G+ I
Sbjct: 28 FYAGAKAGWASFHNDVKQLDNIYGQDAYSSLEQDEKFGVHRNSVTYGVFGGYQITDN--- 84
Query: 104 FGINCHTTAAKDDST--FYRLKEKYFIYG-DVVLKAGYSV---DSLLIYGMGGFGGAYVI 157
F + ++ ++ +G ++ LKA Y V D L +YG G
Sbjct: 85 FAVEAGYDFYGQLKAHQGDNVRFRHTAHGLNLSLKASYPVAYVDGLDVYGRLGAALIRSD 144
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + S V G++Y + +++ Y++I
Sbjct: 145 YAV------HTNGEKTLSEHKLKVSPVFAAGVEYAILPELAARLEYQWIAKVGKVDQF-- 196
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
E + + SLG++ F
Sbjct: 197 -----EDISYSPSIGSVSLGLSYRF 216
>gi|260774012|ref|ZP_05882927.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
gi|260610973|gb|EEX36177.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
Length = 351
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 57/192 (29%), Gaps = 35/192 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + ++ D +N K + G + G Q + + + +
Sbjct: 42 FYAGQKLGWARYSNNCDDKVNCK----IDTFGYSVFSG--FQFNRW-YALEGSISNYGSP 94
Query: 117 S----TFYRLKEKYFIYGDV--VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + G++ + L Y G G Y+ S +S
Sbjct: 95 DYKINSDFIESNTSIWGGEILSKFRVLDITSHLHAYAKLGLGYQYLNQPSSYTNKSHY-- 152
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
++ GL+Y + SL A ++I N + K +
Sbjct: 153 ----------FGLLGAAGLEYDITDQWSLRAEVQHIDFKEKEDNFNQGK----------D 192
Query: 231 AHIASLGINMHF 242
+S+G++ F
Sbjct: 193 VTFSSIGLSYKF 204
>gi|261822111|ref|YP_003260217.1| outer membrane protein A [Pectobacterium wasabiae WPP163]
gi|261606124|gb|ACX88610.1| OmpA domain protein transmembrane region-containing protein
[Pectobacterium wasabiae WPP163]
Length = 361
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 28/195 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRK---TYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA- 112
Y G + G G +G+ Q + G
Sbjct: 28 WYTGGKLGVSQFHDTGFYGNGYTGVVNNPIKSKLGAGAFVGY--QANPY-LGFELGYDWL 84
Query: 113 -----AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
A D+ + K Y V L +
Sbjct: 85 GRMKYAGSDTNAADSASFKAQGIQLATKLSYPVMPDLD------VYTRLGGLVWRTDSHA 138
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ + G S + +G++Y ++ + + Y+++ + D V
Sbjct: 139 DRSGTHLNNNDTGVSPLAAVGIEYAIDKNWATRVDYQWV----------SNIGDAGTVGA 188
Query: 228 KGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 189 RPDNLLMSVGLSYRF 203
>gi|239950069|gb|ACS36764.1| outer membrane protein P5 [Ornithobacterium rhinotracheale]
Length = 301
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 64/206 (31%), Gaps = 31/206 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 5 FYVGXKAGWATFHNDINQLNSKYKNDARYATSAN---GYVINRNSVTYGVFGGYQIID-- 59
Query: 117 STFYRLKEKYFIYGDVVL-------------------KAGYSVDSLL-IYGMGGFGGAYV 156
++ Y +G V K Y V + L +YG G
Sbjct: 60 --NLAVELGYDYFGRVRGNKQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 117
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S + + +S+VLG G++Y + +++ Y+++ + +
Sbjct: 118 DYKRY----SQTAGVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAE 173
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + ++H + GI+ F
Sbjct: 174 AKENRRATYNYSPDSHSVTAGISYRF 199
>gi|145297230|ref|YP_001140071.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850002|gb|ABO88323.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 368
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 64/198 (32%), Gaps = 24/198 (12%)
Query: 57 NYVGLHISRL-----YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
Y G + ++DT+ + LG+ QL G
Sbjct: 28 WYAGGKAGWSKYFDVDQKQVVSDTLGALQNTGTSKDALGLGAFAGYQLNPN-LGFEFGYD 86
Query: 112 AAK---DDSTFYRLKEKYFI---YGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKV 164
++ + +K G+ V+ L +YG G G A+ +
Sbjct: 87 WLGKYTSSGELSGVRVEGEAKSQMIQATMKIGFPVNDALDLYGRIGGGYAWTDSELSART 146
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+D K D HG+ V +G +Y ++ D + Y+Y + ++R
Sbjct: 147 ATDFIKETG---DKHGAVFVGALGAEYAIDRDWAARLEYQYT--------TPLGDASLDR 195
Query: 225 VDRKGNAHIASLGINMHF 242
+ + + S+G+ F
Sbjct: 196 SGIEMDNGLLSVGMLYRF 213
>gi|19881375|gb|AAM00930.1|AF491822_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 56/191 (29%), Gaps = 16/191 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L N + + L N G+ G+ I V AK
Sbjct: 28 FYAGAKAGWASFHDGLNQFENSQNADGTLRNSVTYGVFGGYQITDNFAVELGYDDFGRAK 87
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + LKA Y V L +Y G + +
Sbjct: 88 RRQGGETVIKHTNHGAHLSLKASYPVLEGLDVYARVGAALIRSDYKPT-----KRAAPNQ 142
Query: 174 GRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
S V GL+Y + +++L Y+++ + D RVD +
Sbjct: 143 THEHSLKVSPVFAGGLEYNLPSLPELALRVEYQWVN------KVGRVEKDGSRVDYTPSI 196
Query: 232 HIASLGINMHF 242
+ G++ F
Sbjct: 197 GSVTAGLSYRF 207
>gi|19881377|gb|AAM00931.1|AF491823_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 56/191 (29%), Gaps = 16/191 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L N + + L N G+ G+ I V AK
Sbjct: 28 FYAGAKAGWASFHDGLNQFENSQNADGTLRNSVTYGVFGGYQITDNFAVELGYDDFGRAK 87
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + LKA Y V L +Y G + +
Sbjct: 88 LRQGGETVIKYTNHGAHLSLKASYPVLEGLDVYARVGAALIRSDYKPT-----KRAAPNQ 142
Query: 174 GRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
S V GL+Y + +++L Y+++ + D RVD +
Sbjct: 143 THEHSLKVSPVFAGGLEYNLPSLPELALRVEYQWVN------KVGRVEKDGSRVDYTPSI 196
Query: 232 HIASLGINMHF 242
+ G++ F
Sbjct: 197 GSVTAGLSYRF 207
>gi|270261236|ref|ZP_06189509.1| outer membrane protein A, precursor [Serratia odorifera 4Rx13]
gi|270044720|gb|EFA17811.1| outer membrane protein A, precursor [Serratia odorifera 4Rx13]
Length = 359
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 54/195 (27%), Gaps = 29/195 (14%)
Query: 57 NYVGLHISRLYETHPLADTIN-----RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
Y G + N G G LG+ Q + G
Sbjct: 28 WYTGAKLGWSQYHDTGFYGNGYQNGIGNGPNHKDQLGAGAFLGY--QANQY-LGFELGYD 84
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ K + K Y + D L IY G +++
Sbjct: 85 WLGRMPYKGSVNNGAFKAQGV-QLAAKLSYPIADDLDIYTRLG------GMVWRADSKAN 137
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ G S + +G++Y + + + Y+++ + D V
Sbjct: 138 YGNGTRLSDHDTGVSPLAAVGVEYALTKNWATRLDYQFV----------SNIGDAGTVGA 187
Query: 228 KGNAHIASLGINMHF 242
+ + + SLG++ F
Sbjct: 188 RPDNTMLSLGVSYRF 202
>gi|161829717|ref|YP_001597251.1| hypothetical protein COXBURSA331_A1573 [Coxiella burnetii RSA 331]
gi|161761584|gb|ABX77226.1| hypothetical protein COXBURSA331_A1573 [Coxiella burnetii RSA 331]
Length = 273
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 11/146 (7%)
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
A + D+ G + L +Y GG +++ +
Sbjct: 126 VSLGAGSTTVPVIDTTLRLKYNFDLTGIFGIDITPALHLYLKGGGSYGKLVEDFAVLQAT 185
Query: 167 DNSKNAKGRFDGHG-SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN-------- 217
++ ++ HG VVLG GL + +SL A Y + + H++N +N
Sbjct: 186 TSASISQQHQTHHGLWGVVLGAGLARDLCRWVSLFAEYDFYDYGNHTLNTANNISVDPVV 245
Query: 218 AKSDVERVDRKG-NAHIASLGINMHF 242
A DV + K A+ GIN++F
Sbjct: 246 APPDVYTQEAKNIRAYTIRAGINVNF 271
>gi|129141|sp|P04845|OMPA_SERMA RecName: Full=Outer membrane protein A; Flags: Precursor
gi|758300|emb|CAA25254.1| ompA protein [Serratia marcescens]
Length = 359
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 53/195 (27%), Gaps = 28/195 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G + + P G G LG+ Q + G
Sbjct: 28 WYTGAKLGWSQYHDTGFYGNGYQNGIGNGPTHKDQLGAGAFLGY--QANQY-LGFELGYD 84
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ K + K Y + D L IY G +
Sbjct: 85 WLGRMPYKGSVNNGAFKAQGV-QLAAKLSYPIADDLDIYTRLGGMVWRADSKANYGRTGQ 143
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ G S + +G++Y + + + Y+++ + D V
Sbjct: 144 RLSD-----HDTGVSPLAAVGVEYALTKNWATRLDYQFV----------SNIGDAGTVGA 188
Query: 228 KGNAHIASLGINMHF 242
+ + + SLG++ F
Sbjct: 189 RPDNTMLSLGVSYRF 203
>gi|146281203|ref|YP_001171356.1| outer membrane protein OprG [Pseudomonas stutzeri A1501]
gi|145569408|gb|ABP78514.1| outer membrane protein OprG [Pseudomonas stutzeri A1501]
Length = 225
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G + D L N N D + +G+DYM+ +I L+A R
Sbjct: 131 PYVGAGVNYTWFFDDKLSSHAEGNGFNGLDLKDSW--GLAAQVGMDYMLTDNIMLNAQVR 188
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YI + +N V +VD + + +G+ F
Sbjct: 189 YIDIDTEATSNHATLGKV-KVDVDVDPFVYMVGLGYKF 225
>gi|91224159|ref|ZP_01259422.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
gi|254228031|ref|ZP_04921461.1| outer membrane protein [Vibrio sp. Ex25]
gi|262395989|ref|YP_003287842.1| putative outer membrane protein [Vibrio sp. Ex25]
gi|91191070|gb|EAS77336.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
gi|151939527|gb|EDN58355.1| outer membrane protein [Vibrio sp. Ex25]
gi|262339583|gb|ACY53377.1| putative outer membrane protein [Vibrio sp. Ex25]
Length = 204
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/193 (10%), Positives = 53/193 (27%), Gaps = 19/193 (9%)
Query: 58 YVGLHIS-RLYETHPLADTINRKTYN------SLLPNGLGIELGHNIQLEDFVFGINCHT 110
YVG + + + + + G+ + +
Sbjct: 23 YVGASVGQASFGDVNGSINGGGTNASTKLKLEDDSSLSGKVFGGYKF---NEYISLEAAI 79
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ KA + D ++ G V ++
Sbjct: 80 GGYDALDGKVVTVGDMKYL-SIQPKATLPIGDRFNLFAKAGLSYFNAEFKISNSVIDGSA 138
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ D + + G+G ++ + + +L + Y+ + N E+V
Sbjct: 139 GHTTIS-DSTVTGM-YGLGAEFAITENFALQVEWEYMMPELDIAKFGN-----EKVTVDA 191
Query: 230 NAHIASLGINMHF 242
+ ++ S+G++ F
Sbjct: 192 DINVFSVGMSYRF 204
>gi|46251216|gb|AAS84579.1| truncated Omp25b [Brucella pinnipedialis]
Length = 102
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G I + L+D + G+ G+N +
Sbjct: 29 QEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSD-EDTSIRVKPDGFLGGLYAGYNFDMG 87
Query: 101 -DFVFGINCHTTAAK 114
+FV G++ T
Sbjct: 88 NNFVLGVDGDITYND 102
>gi|157369997|ref|YP_001477986.1| outer membrane protein A [Serratia proteamaculans 568]
gi|157321761|gb|ABV40858.1| OmpA domain protein transmembrane region-containing protein
[Serratia proteamaculans 568]
Length = 358
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 55/195 (28%), Gaps = 29/195 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G + + P G G LG+ Q + G
Sbjct: 28 WYTGAKLGWSQYHDTGFYGNGYQNGIGNGPTHKDQLGAGAFLGY--QANQY-LGFELGYD 84
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ K + K Y +D L IY G +++
Sbjct: 85 WLGRMPYKGSVNNGAFKAQGV-QLAAKLSYPIMDDLDIYTRLG------GMVWRADSKAN 137
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ G S + +G++Y + + + Y+++ + D V
Sbjct: 138 YGNGTRLSDHDTGVSPLAAVGVEYALTKNWATRLDYQFV----------SNIGDAGTVGA 187
Query: 228 KGNAHIASLGINMHF 242
+ + + SLG++ F
Sbjct: 188 RPDNTMLSLGVSYRF 202
>gi|145635014|ref|ZP_01790720.1| outer membrane protein P5 [Haemophilus influenzae PittAA]
gi|145267622|gb|EDK07620.1| outer membrane protein P5 [Haemophilus influenzae PittAA]
Length = 355
Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 55/193 (28%), Gaps = 11/193 (5%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G+ + L G+ G+ I L G+
Sbjct: 28 FYAGVKAGQASFHDGLRALARENKVGYHRNSFTYGVFGGYQI-LNQNNLGLAVELGYDDF 86
Query: 116 DSTFYRLKEKY-----FIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
R K K + LK Y V L +YG G K S+++
Sbjct: 87 GRAKGREKGKTVAKHTNHGAHLSLKGSYEVLEGLDVYGKAGVALVRSDYKLYNKNSSNST 146
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G +S + +G +Y V ++++ Y+++ ++
Sbjct: 147 LKNLGEHHRARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYRPQDKPNSALNYNP 203
Query: 230 NAHIASLGINMHF 242
+ GI+ F
Sbjct: 204 WIGSINAGISYRF 216
>gi|58200723|gb|AAW66611.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 56/191 (29%), Gaps = 16/191 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L N + + L N G+ G+ I V AK
Sbjct: 28 FYAGAKAGWASFHDGLNQFENSQNADGTLRNSVTYGVFGGYQITDNFAVELGYDDFGRAK 87
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + LKA Y V L +Y G + +
Sbjct: 88 RRQGGETVIKHTNHGAHLSLKASYPVLEGLDVYARVGAALIRSDYKPT-----KRAAPNQ 142
Query: 174 GRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
S V GL+Y + +++L Y+++ + D RVD +
Sbjct: 143 THEHSLKVSPVFAGGLEYNLPSLPELALRVEYQWVN------KVGRVEKDGSRVDYTLSI 196
Query: 232 HIASLGINMHF 242
+ G++ F
Sbjct: 197 GSVTAGLSYRF 207
>gi|302036157|ref|YP_003796479.1| hypothetical protein NIDE0786 [Candidatus Nitrospira defluvii]
gi|300604221|emb|CBK40553.1| conserved exported protein of unknown function, OmpA-like
[Candidatus Nitrospira defluvii]
Length = 213
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 54/198 (27%), Gaps = 28/198 (14%)
Query: 57 NYVGLHISRLYET-------HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
Y + + ++ +N G +LG +FG+
Sbjct: 32 WYAAAQLGVNFADPLRNVRGSGTLAGLDAPNFNLKTSPAFGGKLGFFPSHG--LFGLELD 89
Query: 110 TTAA-----KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ + D I G VVL+ Y + Y GG
Sbjct: 90 VSHSTPHIKNLDDVPGIHLSVTNIGGHVVLR--YPGVTWQPYIGGGPALLVAHLGRSTTT 147
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
E D + +G+ V +++ Y+Y + A V
Sbjct: 148 ERD---------TQVSVGGNVLVGIRAFVTPKVAMFTEYKYTD---STFRFGGAFGPVGG 195
Query: 225 VDRKGNAHIASLGINMHF 242
D AH +G++ HF
Sbjct: 196 FDATYRAHQLFVGLSYHF 213
>gi|330831536|ref|YP_004394488.1| outer membrane protein A [Aeromonas veronii B565]
gi|328806672|gb|AEB51871.1| Outer membrane protein A [Aeromonas veronii B565]
Length = 364
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 62/201 (30%), Gaps = 34/201 (16%)
Query: 57 NYVGLHISRLYETH--------PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC 108
YVG +A T+ + N+ GLG+ G+ QL G
Sbjct: 28 WYVGGKAGWSNYYGVDHNQYAESIAQTLGNTSENTDD-LGLGLFAGY--QLNPN-LGFEL 83
Query: 109 HTTAAKDDSTFYRLKEKY------FIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSL 161
T +K + ++L +YG G A+
Sbjct: 84 GYDWLGKYDTTSGTGANTLNTEAKSQMIQATMKISFPATNVLDLYGRLGGAYAWTDSEIS 143
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
S+ K HG++ V +G +Y ++ D + Y+Y +
Sbjct: 144 FANTSETGK-------KHGAAFVGALGAEYAIDRDWAARLEYQYT--------TPLGDAS 188
Query: 222 VERVDRKGNAHIASLGINMHF 242
++R + + + S G+ F
Sbjct: 189 LDRSGIEMDNGLISFGMLYRF 209
>gi|260582095|ref|ZP_05849889.1| outer membrane protein P5 [Haemophilus influenzae NT127]
gi|260094727|gb|EEW78621.1| outer membrane protein P5 [Haemophilus influenzae NT127]
Length = 350
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 62/193 (32%), Gaps = 16/193 (8%)
Query: 57 NYVGLHISRLYETHPL-ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G+ + + A + G+ G+ I L FG+
Sbjct: 28 FYAGVKAGQGSFHDGVRAMGKQFSAGHYRNTFTYGVFGGYQI-LNQDNFGLAAELGYDDF 86
Query: 116 D----STFYRLKEKYFIYGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
T +L K+ +G + LK Y V D L +YG G +
Sbjct: 87 GRAKLKTTGKLTGKHTNHGTHLSLKGSYEVLDGLDVYGRLGVALIRSDYKYYD----QGV 142
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ S V GL+Y V ++++ Y+++ ++ N + D
Sbjct: 143 RQRAKSEHSSRVSPVFAAGLEYAVLPELAVRVEYQWVNQIGKLRSHDNNRVY----DYNP 198
Query: 230 NAHIASLGINMHF 242
+ + GI+ F
Sbjct: 199 SVGSINAGISYRF 211
>gi|19881371|gb|AAM00928.1|AF491820_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|19881381|gb|AAM00933.1|AF491825_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|19881383|gb|AAM00934.1|AF491826_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|38385761|gb|AAR19399.1| hemagglutinin antigen [Avibacterium paragallinarum]
gi|89147814|gb|ABD62756.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 55/191 (28%), Gaps = 16/191 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L N + L N G+ G+ I V AK
Sbjct: 28 FYAGAKAGWASFHDGLNQFENSQNAYGTLRNSVTYGVFGGYQITDNFAVELGYDDFGRAK 87
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + LKA Y V L +Y G + +
Sbjct: 88 LRQDGETVGKHTNHGAHLSLKASYPVLEGLDVYARVGAALIRSDYKPT-----KRAAPNE 142
Query: 174 GRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
S V GL+Y + +++L Y+++ + D RVD +
Sbjct: 143 THEHSLKVSPVFAGGLEYNLPSLPELALRVEYQWVN------KVGRWEKDGSRVDYTPSI 196
Query: 232 HIASLGINMHF 242
+ G++ F
Sbjct: 197 GSVTAGLSYRF 207
>gi|156739568|gb|ABU93444.1| Omp25 [Brucella melitensis]
gi|156739602|gb|ABU93461.1| Omp25 [Brucella suis]
Length = 66
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 11/76 (14%)
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
L+ K G + + GY ++ ++ Y G G+ + + N
Sbjct: 1 LEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRV 49
Query: 182 SVVLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 50 GWTAGAGLEAKLTDNI 65
>gi|90577941|ref|ZP_01233752.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90441027|gb|EAS66207.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 347
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 17/164 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAAKD 115
YVG + + ++ + + N + G+ G+N + F + T
Sbjct: 27 FYVGARLGGAHYSNFQQNYQDITGINLNKDDVAAGVFAGYN--FTPW-FAVETGYTWLG- 82
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
++ F K K D ++G G +D
Sbjct: 83 EAKFENNKIKQNAIDLAAKMTWNLNDQWGVFGKLGGSYM----------LADFHGYGIKD 132
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYR-YIPHHIHSVNNSNA 218
D H G+G++Y + +S Y+ Y + + A
Sbjct: 133 LDDHLLG-TAGVGVEYKLTNHLSTRLEYQLYHDIRSKPRDTNLA 175
>gi|148555704|ref|YP_001263286.1| opacity protein and related surface antigens-like protein
[Sphingomonas wittichii RW1]
gi|148500894|gb|ABQ69148.1| Opacity protein and related surface antigens-like protein
[Sphingomonas wittichii RW1]
Length = 188
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 41/139 (29%), Gaps = 15/139 (10%)
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY 138
G+ G++ Q+ V G+ + + S + Y
Sbjct: 41 SNNGHDDAVTYGLGAGYDFQMGGAVLGVEAEASDSSAKSCIGSATAADPRLCAKAGRDLY 100
Query: 139 SVD--------SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
L+Y G+ A + + R G+ V +G G++
Sbjct: 101 VGGRVGTVVGGKALLYAKAGYTNARAKATL-------DDGTTVLRDSGNYDGVRVGAGVE 153
Query: 191 YMVNYDISLSASYRYIPHH 209
Y + + + A YRY +
Sbjct: 154 YALGTNAYVKAEYRYSNYE 172
>gi|59714283|ref|YP_207058.1| outer membrane protein A [Vibrio fischeri ES114]
gi|59482531|gb|AAW88170.1| outer membrane protein A [Vibrio fischeri ES114]
Length = 324
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 58/189 (30%), Gaps = 28/189 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + + + G G+ G+ Q + F +
Sbjct: 21 YLGGQVGVSHFLGACSSNAIEC---KNYVTGGGLYGGY--QFNSW-FALEGSWHDYGSPK 74
Query: 118 TFYRLKEKYFIYGD---VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
TFY + + Y+ + +K V D+L +Y GG Y+ S + V ++
Sbjct: 75 TFYGVGDGYYSNATGVDLSVKLSLPVTDNLDLYAKGGAAYNYLSVSGNDNVHLGMFESDS 134
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
D G +Y + + SL ++ K + +
Sbjct: 135 SIDDIWEI------GAEYALAPNWSLR-------FGTSIIDGIGNAKTG-----KSDLYF 176
Query: 234 ASLGINMHF 242
SLG+ F
Sbjct: 177 TSLGLTYKF 185
>gi|154706605|ref|YP_001423993.1| hypothetical protein CBUD_0584 [Coxiella burnetii Dugway 5J108-111]
gi|154355891|gb|ABS77353.1| hypothetical exported protein [Coxiella burnetii Dugway 5J108-111]
Length = 273
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
A + D+ G + L +Y GG A +++ +
Sbjct: 126 VSLGAGSTTVPVIDTTLRLKYNLDLTGIFGIDITPALHLYLKGGGSYAKLVEDFAVLQAT 185
Query: 167 DNSKNAKGRFDGHG-SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN-------- 217
++ ++ HG VVLG GL + +SL A Y + + H++N +N
Sbjct: 186 TSASISQQHQTHHGLWGVVLGAGLARDLCRWVSLFAEYDFYDYGNHTLNTANNISVDPVV 245
Query: 218 AKSDVERVDRKG-NAHIASLGINMHF 242
A DV + K A+ GIN++F
Sbjct: 246 APPDVYTQEAKNIRAYTIRAGINVNF 271
>gi|164686055|ref|ZP_01946369.2| hypothetical protein A35_A1452 [Coxiella burnetii 'MSU Goat Q177']
gi|165924203|ref|ZP_02220035.1| hypothetical protein COXBURSA334_0554 [Coxiella burnetii RSA 334]
gi|212212224|ref|YP_002303160.1| hypothetical protein CbuG_0604 [Coxiella burnetii CbuG_Q212]
gi|212219009|ref|YP_002305796.1| hypothetical protein CbuK_1485 [Coxiella burnetii CbuK_Q154]
gi|164601611|gb|EAX33042.2| hypothetical protein A35_A1452 [Coxiella burnetii 'MSU Goat Q177']
gi|165916352|gb|EDR34956.1| hypothetical protein COXBURSA334_0554 [Coxiella burnetii RSA 334]
gi|212010634|gb|ACJ18015.1| hypothetical exported protein [Coxiella burnetii CbuG_Q212]
gi|212013271|gb|ACJ20651.1| hypothetical exported protein [Coxiella burnetii CbuK_Q154]
Length = 273
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
A + D+ G + L +Y GG A +++ +
Sbjct: 126 VSLGAGSTTVPVIDTTLRLKYNLDLTGIFGIDITPALHLYLKGGGSYAKLVEDFAVLQAT 185
Query: 167 DNSKNAKGRFDGHG-SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN-------- 217
++ ++ HG VVLG GL + +SL A Y + + H++N +N
Sbjct: 186 TSASISQQHQTHHGLWGVVLGAGLARDLCRWVSLFAEYDFYDYGNHTLNTANNISVDPVV 245
Query: 218 AKSDVERVDRKG-NAHIASLGINMHF 242
A DV + K A+ GIN++F
Sbjct: 246 APPDVYTQEAKNIRAYTIRAGINVNF 271
>gi|296447830|ref|ZP_06889743.1| porin opacity type [Methylosinus trichosporium OB3b]
gi|296254689|gb|EFH01803.1| porin opacity type [Methylosinus trichosporium OB3b]
Length = 284
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 55/222 (24%), Gaps = 34/222 (15%)
Query: 53 IWSGNYVGLHISRL--------YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV- 103
+ G Y+ P + + + I G Q ++
Sbjct: 41 DYGGWYLRGDGGVGINQISNLRSTFDPTKVVPAPLFESYSIGDSAFIGTGVGYQFNSWLR 100
Query: 104 ------------FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA------GY----SVD 141
+ T +D + + + +A GY +
Sbjct: 101 ADITGEYRTASTYRATQSYTNLWNDLCGGAVGGRCHDLYNAQHRAAVFLANGYVDLGTWY 160
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSK-NAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y GG G A ++ + + + GL Y V ++ L
Sbjct: 161 GITPYVGGGVGFAVNFLQNMTDNGPETGGFGSATNRTQTNFAWAAMAGLGYNVTQNLKLE 220
Query: 201 ASYRYIPHHIHSVNNSNAKSD--VERVDRKGNAHIASLGINM 240
YRY+ N D ER AH LG
Sbjct: 221 VGYRYLDMGRIKSNVIGCPVDCAGERQSFDLAAHDIRLGFRY 262
>gi|205351630|ref|YP_002225431.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205271411|emb|CAR36219.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326626661|gb|EGE33004.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 239
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 63/196 (32%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGDPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K +++ LGI F
Sbjct: 224 TKADSNDFMLGITYAF 239
>gi|19881369|gb|AAM00927.1|AF491819_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 56/191 (29%), Gaps = 16/191 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L N + + L N G+ G+ I V AK
Sbjct: 28 FYAGAKAGWASFHDGLNQFENSQNADGTLRNSVTYGVFGGYQITDNFAVELGYDDFGRAK 87
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + LKA Y V L +Y G + +
Sbjct: 88 RRQGGETVIKYTNHGAHLSLKASYPVLEGLDVYARVGAALIRSDYKPT-----KRAAPNQ 142
Query: 174 GRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
S V GL+Y + +++L Y+++ + D RVD +
Sbjct: 143 THEHSLKVSPVFAGGLEYNLPSLPELALRVEYQWVN------KVGRVEKDGSRVDYTPSI 196
Query: 232 HIASLGINMHF 242
+ G++ F
Sbjct: 197 GSVTAGLSYRF 207
>gi|269964179|ref|ZP_06178474.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831083|gb|EEZ85247.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 204
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/195 (11%), Positives = 48/195 (24%), Gaps = 23/195 (11%)
Query: 58 YVGLHIS-RLYETHPLADTINRKTYN------SLLPNGLGIELGHNIQLEDFVFGINCHT 110
Y+G I + + + + I G+ + +
Sbjct: 23 YIGASIGQASFGDVNSSVSAGGNNSSMKLKLEDDSSLSGKIFGGYKF---NEYISLEGAI 79
Query: 111 TAAKDDSTFYRLKEKYFIYG---DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
L G D ++ G V
Sbjct: 80 GGYDALDGKVATVGDMKFLAIQPKATLPIG---DHFNLFAKAGLSYFNAELKVSNSV--I 134
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
N + S + G+G ++ + + +L + Y+ + N K+ V
Sbjct: 135 NGSSGHTTLSDSTVSGMYGLGAEFAIAKNFALQIEWEYMRPELEIAKAGNDKATV----- 189
Query: 228 KGNAHIASLGINMHF 242
+ S+G+N F
Sbjct: 190 DAEISVFSVGMNYRF 204
>gi|33151319|ref|NP_872672.1| major outer membrane protein homolog, OmpA2 [Haemophilus ducreyi
35000HP]
gi|1872471|gb|AAB49274.1| OmpA2 [Haemophilus ducreyi]
gi|33147539|gb|AAP95061.1| major outer membrane protein-like protein, OmpA2 [Haemophilus
ducreyi 35000HP]
Length = 407
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 70/233 (30%), Gaps = 49/233 (21%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG H + + K N + E NI+ + +G+ +
Sbjct: 26 FYVGAKAGWA-SFHRGINQFDNKYKNRKHTAVMK-EGKLNIRRDSVTYGVFAGYQIFNQN 83
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLL-------------------------------- 144
+ Y YG + K ++ + +
Sbjct: 84 KAGLAAELGYDYYGQLSAKFKHAEKNSIQFPVVSAMKDRATDNNEEYVVRHTAHGVNFSL 143
Query: 145 -----------IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD--GHGSSVVLGIGLDY 191
Y G G A S K ++ N+K K + S++LG G +Y
Sbjct: 144 KPSYELLPDLDAYAKVGIGLARNDYSVKPKKKAVNNKTEKVKNRVYDVKPSLILGAGFEY 203
Query: 192 MVNYDISLSASYRYIP--HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +++L Y+Y+ ++ K++ + H S G++ F
Sbjct: 204 AIIPELALRVEYQYLNRVGNLGKAIKKAYKTNDMVGKYSPDMHSVSAGLSYRF 256
>gi|261346858|ref|ZP_05974502.1| SapA protein [Providencia rustigianii DSM 4541]
gi|282565038|gb|EFB70573.1| SapA protein [Providencia rustigianii DSM 4541]
Length = 244
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG-----HGSSVVLGIGLDYMVNYDISL 199
Y G G A + ++ E + + + + LG+G Y N ++S
Sbjct: 140 PYISFGLGLASTRYENTQRSEFEILGLKQSSNQSKSQRINKLAWSLGLGSRYAFNDNLSF 199
Query: 200 SASYRYIPHHIHSVNNSNA--KSDVERVDRKGNAHIASLGINMHF 242
YR+ + ++ NA K + K AH GI F
Sbjct: 200 DLGYRFTEAGKYKISMPNAFDKDGTDTSTIKLAAHDFMFGIAYRF 244
>gi|19881379|gb|AAM00932.1|AF491824_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 55/191 (28%), Gaps = 16/191 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L N + L N G+ G+ I V AK
Sbjct: 28 FYAGAKAGWASFHDGLNQFENSQNAYGTLRNSVTYGVFGGYQITDNFAVELGYDDFGRAK 87
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + LKA Y V L +Y G + +
Sbjct: 88 LRQDGETVGKHTNHGAHLSLKASYPVLEGLDVYARVGAALIRSDYKPT-----KRAAPNE 142
Query: 174 GRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
S V GL+Y + +++L Y+++ + D RVD +
Sbjct: 143 THEHTLKVSPVFAGGLEYNLPSLPELALRVEYQWVN------KVGRWEKDGSRVDYTPSI 196
Query: 232 HIASLGINMHF 242
+ G++ F
Sbjct: 197 GSVTAGLSYRF 207
>gi|154246508|ref|YP_001417466.1| opacity protein and related surface antigens-like protein
[Xanthobacter autotrophicus Py2]
gi|154160593|gb|ABS67809.1| Opacity protein and related surface antigens-like protein
[Xanthobacter autotrophicus Py2]
Length = 236
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 47/186 (25%), Gaps = 12/186 (6%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG Y+ + T + L +G + G + + G
Sbjct: 60 SGWYMRADAGYVASTGSRVTSAGVPAAGELSGSGWSVGGGIGYRFLPVLRG-EVSLDYLD 118
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ + + + V I G
Sbjct: 119 LGTARNGIAHMSSNATVALASLYWDV----ITVAGFTPYLSAGAGFSINSLDVAPAAFGP 174
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G G+ Y ++ D+SL SYRY+ S A SD AH
Sbjct: 175 AVNDWQFAWSAGAGVSYALSADLSLDVSYRYLDLGSPSSAGVFAVSDAI-------AHQV 227
Query: 235 SLGINM 240
G+
Sbjct: 228 RFGVRY 233
>gi|269967310|ref|ZP_06181373.1| putative outer membrane protein [Vibrio alginolyticus 40B]
gi|269828088|gb|EEZ82359.1| putative outer membrane protein [Vibrio alginolyticus 40B]
Length = 197
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/193 (10%), Positives = 53/193 (27%), Gaps = 19/193 (9%)
Query: 58 YVGLHIS-RLYETHPLADTINRKTYN------SLLPNGLGIELGHNIQLEDFVFGINCHT 110
YVG + + + + + G+ + +
Sbjct: 16 YVGASVGQASFGDVNGSINGGGTNASTKLKLEDDSSLSGKVFGGYKF---NEYISLEAAI 72
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ KA + D ++ G V ++
Sbjct: 73 GGYDALDGKVVTVGDMKYL-SIQPKATLPIGDRFNLFAKAGLSYFNAEFKISNSVIDGSA 131
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ D + + G+G ++ + + +L + Y+ + N E+V
Sbjct: 132 GHTTIS-DSTVTGM-YGLGAEFAITENFALQVEWEYMMPELDIAKFGN-----EKVTVDA 184
Query: 230 NAHIASLGINMHF 242
+ ++ S+G++ F
Sbjct: 185 DINVFSVGMSYRF 197
>gi|254719692|ref|ZP_05181503.1| heat resistant agglutinin 1 precursor [Brucella sp. 83/13]
gi|265984707|ref|ZP_06097442.1| porin opacity type [Brucella sp. 83/13]
gi|306837849|ref|ZP_07470711.1| outer surface protein [Brucella sp. NF 2653]
gi|264663299|gb|EEZ33560.1| porin opacity type [Brucella sp. 83/13]
gi|306407088|gb|EFM63305.1| outer surface protein [Brucella sp. NF 2653]
Length = 274
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 64/216 (29%), Gaps = 33/216 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+ I + A+ ++ GLG + + F+ G
Sbjct: 45 GWYLRGDIGYSWNGFKRAEYAAIGDCDTCNGLGLGGDTLYGDLNGSFLIGGGVGYQVTDY 104
Query: 116 DSTFYRLK--EKYFIYGDVVL-------------KAGYS--------------VDSLLIY 146
T L + G V ++ YS + + Y
Sbjct: 105 FRTDLTLDYMTRSRFSGHVSGPDCNGDTGCAPDERSHYSALSILANAYVDLGNLGGVTPY 164
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G GG V S L + S S+ + + G + +++ L A YRY
Sbjct: 165 VGAGIGGTRVNWSDLVDIASGFSQEGAAN---WRFTYAVMAGASVDLTHNLKLDAGYRYR 221
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + N +D D+ N H +G+ F
Sbjct: 222 HVNGGKMFEGNQWTDA-GYDKGLNIHDIRVGLRYMF 256
>gi|238897463|ref|YP_002923140.1| outer membrane protein 3a (II*;G;d) [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|188474314|gb|ACD49741.1| outer membrane protein A [Candidatus Hamiltonella defensa]
gi|229465218|gb|ACQ66992.1| outer membrane protein 3a (II*;G;d) [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 365
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 53/194 (27%), Gaps = 28/194 (14%)
Query: 57 NYVGLHIS---RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y+G + G G LG+ Q + G +
Sbjct: 28 WYLGSKLGWSRYASTGMKNDYIGIGDGPTHKNQIGAGAFLGY--QANQY-LGFELGSDWF 84
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAG----YSVDSLL-IYGMGGFGGAYVIDSSLEKVESDN 168
Y+ K + ++ G Y + L IY G E+
Sbjct: 85 GRMP--YKGDTKNGAFKAYGVQIGAKLNYPIAEDLDIYTRLGGVVWKAKTKGYTSPEAKR 142
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ G S +GL+Y + + + Y++ + + +
Sbjct: 143 L-----SENDTGVSPFAAVGLEYALTENWATRFDYQWTR----------KIGNFDSIGAA 187
Query: 229 GNAHIASLGINMHF 242
N + S+G++ F
Sbjct: 188 PNNGMLSIGVSYRF 201
>gi|241761569|ref|ZP_04759656.1| hypothetical protein ZmobDRAFT_0733 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241373877|gb|EER63410.1| hypothetical protein ZmobDRAFT_0733 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 270
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 66/213 (30%), Gaps = 34/213 (15%)
Query: 23 SLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN 82
+A D + + E + + G V I + T R
Sbjct: 55 VVAQDTVAQPAVQPVPLTPDPNEVANHSGIKFRGLRVEGDIG--WTRAQANHTTGRNN-- 110
Query: 83 SLLPNGLGIELGHNIQLEDF-VFGINCHT-----TAAKDDSTFYRLKEKYFIYG------ 130
G G LG + +++F VFG+ K+ L + G
Sbjct: 111 ----MGYGGTLGVDAVVDNFFVFGVEGSYWNPSKMWEKNAGNNIALGSQGNNIGQIGTDS 166
Query: 131 ----------DVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
D L+ G+ LLIY GG+ + V ++ G
Sbjct: 167 YSARKMFQEWDATLRMGFLPTKDLLIYMAGGYASGKQRN---VSVNGAGVAAPNSKYVGW 223
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ +G G++Y + + ++A YR+ H+
Sbjct: 224 SNGYSVGGGIEYSITKNFFMNAQYRWTQFGNHT 256
>gi|163854233|ref|YP_001642276.1| hypothetical protein Mext_4837 [Methylobacterium extorquens PA1]
gi|163665838|gb|ABY33205.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 287
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/262 (14%), Positives = 69/262 (26%), Gaps = 39/262 (14%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
+ S+ VP + A DL P + G Y+ +
Sbjct: 14 LTLLASVGVPCLAQAADLLPPPPMPEPLPEPEVFA---------GGWYLRVDGGYGSLDL 64
Query: 71 PLAD---------TINRKTYNSLLPNGLGIELGHNIQLEDFV-------FGINCHTTAAK 114
+ + + N I G Q+ ++ + T
Sbjct: 65 RKSIAEDVSHPPKPYDYAVVQDKVSNQYFIGGGVGYQINPWLRVDATGEYRFRSKWTFVA 124
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYS--------VDSLLIYGMGGFGGAYVIDSSLEKVES 166
+D TF G G + + + G G A+ +
Sbjct: 125 EDKTFGDTGGYNLTSGKFDSIVGLANGYVDLGTWYGVTPFVGAGVGVAHHSFGGVTDKGF 184
Query: 167 DNSKNAKG---RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ G + + L GL Y V +I A+YRY+ + D
Sbjct: 185 GAYEGGYGIGRHNERTNFAWALHAGLGYAVTQNIRFEAAYRYLNMGEATTGVVTCAPDCP 244
Query: 224 RVDRKG---NAHIASLGINMHF 242
+ + +AH +G+ F
Sbjct: 245 KTVYRVKELDAHDVKVGLRYLF 266
>gi|56552387|ref|YP_163226.1| hypothetical protein ZMO1491 [Zymomonas mobilis subsp. mobilis ZM4]
gi|260753934|ref|YP_003226827.1| hypothetical protein Za10_1709 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543961|gb|AAV90115.1| hypothetical protein ZMO1491 [Zymomonas mobilis subsp. mobilis ZM4]
gi|258553297|gb|ACV76243.1| hypothetical protein Za10_1709 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 267
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 65/212 (30%), Gaps = 35/212 (16%)
Query: 23 SLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN 82
+A D + + E + + G V I + T R
Sbjct: 55 VVAQDTVAQPAVQPVPLTPDPNEVANHSGIKFRGLRVEGDIG--WTRAQANHTTGRNN-- 110
Query: 83 SLLPNGLGIELGHNIQLEDF-VFGINCHT-------------------TAAKDDSTFYRL 122
G G LG + +++F VFG+
Sbjct: 111 ----MGYGGTLGVDAVVDNFFVFGVEGSYWNPSKMWEKNAGNNIAIGSQGNNIGQVGNGY 166
Query: 123 KE-KYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
K F D L+ G+ LLIY GG+ + + + + ++ G
Sbjct: 167 SARKMFQEWDATLRMGFLPTKDLLIYMAGGYASGKQRNLYM-----NGAGAPTSKYVGWS 221
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ +G G++Y + + ++A YR+ H+
Sbjct: 222 NGYSVGGGIEYSITKNFFMNAQYRWTQFGNHT 253
>gi|188584565|ref|YP_001928010.1| hypothetical protein Mpop_5383 [Methylobacterium populi BJ001]
gi|179348063|gb|ACB83475.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 288
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 57/217 (26%), Gaps = 30/217 (13%)
Query: 56 GNYVGLHISRLYETHPLAD---------TINRKTYNSLLPNGLGIELGHNIQLEDFV--- 103
G Y+ + + + + N I G Q+ ++
Sbjct: 51 GWYLRVDGGYGSLDLRKSIAEDVSHPPKPYDYAVVQDKVSNQYFIGGGVGYQINPWLRVD 110
Query: 104 ----FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS--------VDSLLIYGMGGF 151
+ + +D TF G G + + + G
Sbjct: 111 ATGEYRFRSKWSFVAEDKTFGDTGGYNVTSGKFDSIVGLANGYVDLGTWYGVTPFVGAGV 170
Query: 152 GGAYVIDSSLEKVESDNSKNAKG---RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
G A+ + + G R + + L GL Y V ++ A+YRY+
Sbjct: 171 GVAHHSFGGVTDSGFGAYEGGYGIGRRNERTNFAWALHAGLGYAVTENVRFEAAYRYLNM 230
Query: 209 HIHSVNNSNAKSDVERVDR---KGNAHIASLGINMHF 242
+ D + AH +G+ F
Sbjct: 231 GEATTGVVTCAPDCPKTVYRVKDLEAHDVKVGLRYLF 267
>gi|17986628|ref|NP_539262.1| heat resistant agglutinin 1 precursor [Brucella melitensis bv. 1
str. 16M]
gi|225853145|ref|YP_002733378.1| porin opacity type [Brucella melitensis ATCC 23457]
gi|256045300|ref|ZP_05448194.1| porin opacity type [Brucella melitensis bv. 1 str. Rev.1]
gi|256114258|ref|ZP_05455003.1| porin opacity type [Brucella melitensis bv. 3 str. Ether]
gi|256263363|ref|ZP_05465895.1| heat resistant agglutinin 1 [Brucella melitensis bv. 2 str. 63/9]
gi|260565809|ref|ZP_05836292.1| aspartyl/glutamyl tRNA amidotransferase subunit A [Brucella
melitensis bv. 1 str. 16M]
gi|265991725|ref|ZP_06104282.1| porin opacity type [Brucella melitensis bv. 1 str. Rev.1]
gi|265995562|ref|ZP_06108119.1| porin opacity type [Brucella melitensis bv. 3 str. Ether]
gi|17982243|gb|AAL51526.1| heat resistant agglutinin 1 precursor [Brucella melitensis bv. 1
str. 16M]
gi|225641510|gb|ACO01424.1| porin opacity type [Brucella melitensis ATCC 23457]
gi|260151182|gb|EEW86277.1| aspartyl/glutamyl tRNA amidotransferase subunit A [Brucella
melitensis bv. 1 str. 16M]
gi|262766846|gb|EEZ12464.1| porin opacity type [Brucella melitensis bv. 3 str. Ether]
gi|263002681|gb|EEZ15084.1| porin opacity type [Brucella melitensis bv. 1 str. Rev.1]
gi|263093362|gb|EEZ17431.1| heat resistant agglutinin 1 [Brucella melitensis bv. 2 str. 63/9]
gi|326409702|gb|ADZ66767.1| porin opacity type [Brucella melitensis M28]
gi|326539410|gb|ADZ87625.1| porin opacity type [Brucella melitensis M5-90]
Length = 274
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 63/216 (29%), Gaps = 33/216 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+ I + A+ ++ G G + + F+ G
Sbjct: 45 GWYLRGDIGYSWNGFKRAEYAPLGDCDTCNGLGRGGDTLYGDLNGSFLIGGGAGYQVTDY 104
Query: 116 DSTFYRLK--EKYFIYGDVVL-------------KAGYS--------------VDSLLIY 146
T L + G V ++ YS + + Y
Sbjct: 105 FRTDLTLDYMTRSRFSGHVSGPDCNGDTGCASDERSHYSALSILANAYVDLGNLGGVTPY 164
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G GG V S L + S S+ + L G + +++ L A YRY
Sbjct: 165 VGAGIGGTRVNWSDLVDITSGFSQEGAAN---WRFTYALMAGASVDLTHNLKLDAGYRYR 221
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + N +D D+ N H +G+ F
Sbjct: 222 HVNGGKMFEGNQWTDA-GYDKGLNIHDIRVGLRYMF 256
>gi|156739550|gb|ABU93435.1| Omp25 [Brucella abortus]
gi|156739554|gb|ABU93437.1| Omp25 [Brucella abortus]
gi|156739570|gb|ABU93445.1| Omp25 [Brucella melitensis]
Length = 65
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 11/75 (14%)
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
+ K G + + GY ++ ++ Y G G+ + + N
Sbjct: 1 EVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVG 49
Query: 183 VVLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 50 WTAGAGLEAKLTDNI 64
>gi|23502547|ref|NP_698674.1| outer surface protein [Brucella suis 1330]
gi|161619619|ref|YP_001593506.1| porin opacity type [Brucella canis ATCC 23365]
gi|163845269|ref|YP_001622924.1| hypothetical protein BSUIS_B1165 [Brucella suis ATCC 23445]
gi|254703468|ref|ZP_05165296.1| hypothetical protein Bsuib36_06002 [Brucella suis bv. 3 str. 686]
gi|260568776|ref|ZP_05839244.1| heat resistant agglutinin 1 [Brucella suis bv. 4 str. 40]
gi|261754098|ref|ZP_05997807.1| porin opacity type [Brucella suis bv. 3 str. 686]
gi|23348546|gb|AAN30589.1| outer surface protein [Brucella suis 1330]
gi|161336430|gb|ABX62735.1| porin opacity type [Brucella canis ATCC 23365]
gi|163675992|gb|ABY40102.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|260154160|gb|EEW89242.1| heat resistant agglutinin 1 [Brucella suis bv. 4 str. 40]
gi|261743851|gb|EEY31777.1| porin opacity type [Brucella suis bv. 3 str. 686]
Length = 274
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 76/261 (29%), Gaps = 37/261 (14%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
+F + ++ + +L V + DL V G Y+ I +
Sbjct: 4 SRIFYAGLIASAALIVSFSVASATDLRETVPEVVIAPPAV----GGWYLRGDIGYSWNGF 59
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK--EKYFI 128
A+ ++ G G + + F+ G T L +
Sbjct: 60 KRAEYAPLGDCDTCNGLGRGGDTLYGDLNGSFLIGGGAGYQVTDYFRTDLTLDYMTRSRF 119
Query: 129 YGDVVL-------------KAGYS--------------VDSLLIYGMGGFGGAYVIDSSL 161
G V ++ YS + + Y G GG V S L
Sbjct: 120 SGHVSGPDCNGDTGCASDERSHYSALSILANAYVDLGNLGGVTPYVGAGIGGTRVNWSDL 179
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ S S+ + L G + +++ L A YRY + + N +D
Sbjct: 180 VDITSGFSQEGAAN---WRFTYALMAGASVDLTHNLKLDAGYRYRHVNGGKMFEGNQWTD 236
Query: 222 VERVDRKGNAHIASLGINMHF 242
D+ N H +G+ F
Sbjct: 237 A-GYDKGLNIHDIRVGLRYMF 256
>gi|212212222|ref|YP_002303158.1| hypothetical protein CbuG_0602 [Coxiella burnetii CbuG_Q212]
gi|212010632|gb|ACJ18013.1| hypothetical exported protein [Coxiella burnetii CbuG_Q212]
Length = 263
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 9/129 (6%)
Query: 123 KEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYV--IDSSLEKVESDNSKNAKGRFDGH 179
+ + D+ G + +YG G A + + + + S + + + + +
Sbjct: 133 EFRINSNVDLTGILGTDLTSRTHMYGKLGVSYAKLNQKLTVSQWMASSLQTSVQQKLNKN 192
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN------SNAKSDVERVDRKGNAHI 233
V G+G+ + ISL A Y Y + + + S+ D+ A+
Sbjct: 193 LWGYVAGLGIAEDLGRGISLFAEYDYYDYGKNDLKTLRNIFPSSVLVDIYTQKVLVGAYT 252
Query: 234 ASLGINMHF 242
+G N+ F
Sbjct: 253 IRVGFNIEF 261
>gi|197337853|ref|YP_002158755.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197315105|gb|ACH64554.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 322
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 28/189 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + + + G G+ G+ Q + F +
Sbjct: 21 YLGGQVGVSHFLGACSSNAIEC---KNYVTGGGLYGGY--QFNSW-FALEGSWHDYGSPK 74
Query: 118 TFYRLKEKYFIYGD---VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
TFY + + Y+ + +K V D+L +Y GG Y+ S + V ++
Sbjct: 75 TFYGVGDGYYSNATGVDLSVKLSLPVTDNLDLYAKGGAAYNYLSVSGNDNVHLGMFESDS 134
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
D G +Y + + SL SV + + K + +
Sbjct: 135 SLDDIWEI------GAEYALAPNWSLRLG--------TSVIDGIGNAKTG----KSDLYF 176
Query: 234 ASLGINMHF 242
SLG+ F
Sbjct: 177 TSLGLTYKF 185
>gi|269104382|ref|ZP_06157078.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161022|gb|EEZ39519.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 335
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 15/152 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + + D ++ + G G+ G+N+ + F + T
Sbjct: 26 WYAGFRVGATHYNDISVDGVDSNSAFDRDDMGGGLFAGYNVT--PW-FAVETGYTWLGRA 82
Query: 117 STFYRLKEKYFIYG-DVVLKA-GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
K + D+V K ++ D + +Y G + + +
Sbjct: 83 EFNNDYKMRVDQQAIDLVGKFTWHATDYMGLYAKLGGAYYFSEAKGFGAEKYKDDGVVG- 141
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G GL++ ++ +S Y+Y
Sbjct: 142 ---------TAGAGLEFFLDDHLSARLEYQYY 164
>gi|239950063|gb|ACS36763.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 254
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 60/201 (29%), Gaps = 22/201 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + ++ ++ G+ I +G+
Sbjct: 8 FYVGAKAGWATFHNDINQLNSKYENDARYATSAN---GYGINRNSVTYGVFGGYQIID-- 62
Query: 117 STFYRLKEKYFIYGDVVLKA-----------GYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
++ Y +G V K G + Y + Y +
Sbjct: 63 --NLAVELGYDYFGRVRGKEQEFRAFKHSAHGTHLSLKPSYEVLNGLDVYGKVGAALVRN 120
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHSVNNSNAKSD 221
+ + + +S++LG G++Y + +++ Y+++ + + +
Sbjct: 121 DYKFYDTEDKAHNLKTSLLLGAGVEYAILPELAFRVEYQWLSRVGNANKAAQKRGDTAMF 180
Query: 222 VERVDRKGNAHIASLGINMHF 242
+AH S GI+ F
Sbjct: 181 GPGSTYSPDAHSVSAGISYRF 201
>gi|62290561|ref|YP_222354.1| outer surface protein [Brucella abortus bv. 1 str. 9-941]
gi|82700477|ref|YP_415051.1| heat resistant agglutinin 1 precursor [Brucella melitensis biovar
Abortus 2308]
gi|189024781|ref|YP_001935549.1| heat resistant agglutinin 1 precursor [Brucella abortus S19]
gi|225628258|ref|ZP_03786292.1| outer surface protein [Brucella ceti str. Cudo]
gi|237816067|ref|ZP_04595063.1| outer surface protein [Brucella abortus str. 2308 A]
gi|254689858|ref|ZP_05153112.1| heat resistant agglutinin 1 precursor [Brucella abortus bv. 6 str.
870]
gi|254694350|ref|ZP_05156178.1| heat resistant agglutinin 1 precursor [Brucella abortus bv. 3 str.
Tulya]
gi|254698007|ref|ZP_05159835.1| heat resistant agglutinin 1 precursor [Brucella abortus bv. 2 str.
86/8/59]
gi|254700351|ref|ZP_05162179.1| heat resistant agglutinin 1 precursor [Brucella suis bv. 5 str.
513]
gi|254708443|ref|ZP_05170271.1| heat resistant agglutinin 1 precursor [Brucella pinnipedialis
M163/99/10]
gi|254708704|ref|ZP_05170515.1| heat resistant agglutinin 1 precursor [Brucella pinnipedialis
B2/94]
gi|254714551|ref|ZP_05176362.1| heat resistant agglutinin 1 precursor [Brucella ceti M644/93/1]
gi|254717448|ref|ZP_05179259.1| heat resistant agglutinin 1 precursor [Brucella ceti M13/05/1]
gi|254730893|ref|ZP_05189471.1| heat resistant agglutinin 1 precursor [Brucella abortus bv. 4 str.
292]
gi|256030230|ref|ZP_05443844.1| heat resistant agglutinin 1 precursor [Brucella pinnipedialis
M292/94/1]
gi|256061727|ref|ZP_05451864.1| heat resistant agglutinin 1 precursor [Brucella neotomae 5K33]
gi|256160405|ref|ZP_05458094.1| heat resistant agglutinin 1 precursor [Brucella ceti M490/95/1]
gi|256255611|ref|ZP_05461147.1| heat resistant agglutinin 1 precursor [Brucella ceti B1/94]
gi|256258112|ref|ZP_05463648.1| heat resistant agglutinin 1 precursor [Brucella abortus bv. 9 str.
C68]
gi|256370098|ref|YP_003107609.1| outer surface protein [Brucella microti CCM 4915]
gi|260167905|ref|ZP_05754716.1| outer surface protein [Brucella sp. F5/99]
gi|260547194|ref|ZP_05822932.1| heat resistant agglutinin 1 [Brucella abortus NCTC 8038]
gi|260755389|ref|ZP_05867737.1| porin opacity type [Brucella abortus bv. 6 str. 870]
gi|260758610|ref|ZP_05870958.1| porin opacity type [Brucella abortus bv. 4 str. 292]
gi|260762442|ref|ZP_05874779.1| porin opacity type [Brucella abortus bv. 2 str. 86/8/59]
gi|260884405|ref|ZP_05896019.1| porin opacity type [Brucella abortus bv. 9 str. C68]
gi|261214658|ref|ZP_05928939.1| porin opacity type [Brucella abortus bv. 3 str. Tulya]
gi|261219279|ref|ZP_05933560.1| porin opacity type [Brucella ceti M13/05/1]
gi|261222814|ref|ZP_05937095.1| porin opacity type [Brucella ceti B1/94]
gi|261315943|ref|ZP_05955140.1| porin opacity type [Brucella pinnipedialis M163/99/10]
gi|261316195|ref|ZP_05955392.1| porin opacity type [Brucella pinnipedialis B2/94]
gi|261322340|ref|ZP_05961537.1| porin opacity type [Brucella ceti M644/93/1]
gi|261325731|ref|ZP_05964928.1| porin opacity type [Brucella neotomae 5K33]
gi|261750845|ref|ZP_05994554.1| porin opacity type [Brucella suis bv. 5 str. 513]
gi|261757343|ref|ZP_06001052.1| heat resistant agglutinin 1 [Brucella sp. F5/99]
gi|265987258|ref|ZP_06099815.1| porin opacity type [Brucella pinnipedialis M292/94/1]
gi|265998773|ref|ZP_06111330.1| porin opacity type [Brucella ceti M490/95/1]
gi|297248960|ref|ZP_06932668.1| heat resistant agglutinin 1 precursor [Brucella abortus bv. 5 str.
B3196]
gi|62196693|gb|AAX74993.1| outer surface protein [Brucella abortus bv. 1 str. 9-941]
gi|82616578|emb|CAJ11657.1| heat resistant agglutinin 1 precursor [Brucella melitensis biovar
Abortus 2308]
gi|189020353|gb|ACD73075.1| heat resistant agglutinin 1 precursor [Brucella abortus S19]
gi|225616104|gb|EEH13152.1| outer surface protein [Brucella ceti str. Cudo]
gi|237788730|gb|EEP62942.1| outer surface protein [Brucella abortus str. 2308 A]
gi|256000261|gb|ACU48660.1| outer surface protein [Brucella microti CCM 4915]
gi|260095559|gb|EEW79437.1| heat resistant agglutinin 1 [Brucella abortus NCTC 8038]
gi|260668928|gb|EEX55868.1| porin opacity type [Brucella abortus bv. 4 str. 292]
gi|260672868|gb|EEX59689.1| porin opacity type [Brucella abortus bv. 2 str. 86/8/59]
gi|260675497|gb|EEX62318.1| porin opacity type [Brucella abortus bv. 6 str. 870]
gi|260873933|gb|EEX81002.1| porin opacity type [Brucella abortus bv. 9 str. C68]
gi|260916265|gb|EEX83126.1| porin opacity type [Brucella abortus bv. 3 str. Tulya]
gi|260921398|gb|EEX88051.1| porin opacity type [Brucella ceti B1/94]
gi|260924368|gb|EEX90936.1| porin opacity type [Brucella ceti M13/05/1]
gi|261295030|gb|EEX98526.1| porin opacity type [Brucella ceti M644/93/1]
gi|261295418|gb|EEX98914.1| porin opacity type [Brucella pinnipedialis B2/94]
gi|261301711|gb|EEY05208.1| porin opacity type [Brucella neotomae 5K33]
gi|261304969|gb|EEY08466.1| porin opacity type [Brucella pinnipedialis M163/99/10]
gi|261737327|gb|EEY25323.1| heat resistant agglutinin 1 [Brucella sp. F5/99]
gi|261740598|gb|EEY28524.1| porin opacity type [Brucella suis bv. 5 str. 513]
gi|262553462|gb|EEZ09231.1| porin opacity type [Brucella ceti M490/95/1]
gi|264659455|gb|EEZ29716.1| porin opacity type [Brucella pinnipedialis M292/94/1]
gi|297174093|gb|EFH33450.1| heat resistant agglutinin 1 precursor [Brucella abortus bv. 5 str.
B3196]
Length = 274
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 76/261 (29%), Gaps = 37/261 (14%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
+F + ++ + +L V + DL V G Y+ I +
Sbjct: 4 SRIFYAGLIASAALIVSFSVASATDLPETVPEVVIAPPAV----GGWYLRGDIGYSWNGF 59
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK--EKYFI 128
A+ ++ G G + + F+ G T L +
Sbjct: 60 KRAEYAPLGDCDTCNGLGRGGDTLYGDLNGSFLIGGGAGYQVTDYFRTDLTLDYMTRSRF 119
Query: 129 YGDVVL-------------KAGYS--------------VDSLLIYGMGGFGGAYVIDSSL 161
G V ++ YS + + Y G GG V S L
Sbjct: 120 SGHVSGPDCNGDTGCASDERSHYSALSILANAYVDLGNLGGVTPYVGAGIGGTRVNWSDL 179
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ S S+ + L G + +++ L A YRY + + N +D
Sbjct: 180 VDITSGFSQEGAAN---WRFTYALMAGASVDLTHNLKLDAGYRYRHVNGGKMFEGNQWTD 236
Query: 222 VERVDRKGNAHIASLGINMHF 242
D+ N H +G+ F
Sbjct: 237 A-GYDKGLNIHDIRVGLRYMF 256
>gi|330448107|ref|ZP_08311755.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492298|dbj|GAA06252.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 348
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 48/157 (30%), Gaps = 17/157 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G+ + + ++ + + N + G+ G+N + + F + T +
Sbjct: 27 FYAGVRVGGAHYSNFQQNYQDVTGINLNKDDVAAGLFAGYN--ITPW-FAVETGYTWLGE 83
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ K K + + D ++G G D
Sbjct: 84 AKFQHN-KIKQHAFDLTGKATWHLNDKWGVFGKLGGSYMLT----------DFHGYGIKD 132
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYR-YIPHHIH 211
D H +G G++Y + +S Y+ Y +
Sbjct: 133 IDEHLVG-TVGAGVEYQLTDHLSTRLEYQLYHDLKSN 168
>gi|24376330|ref|NP_720438.1| outer membrane protein A [Shewanella oneidensis MR-1]
gi|24345232|gb|AAN53038.1| outer membrane protein OmpA [Shewanella oneidensis MR-1]
Length = 342
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 60/191 (31%), Gaps = 37/191 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLG-IELGHNIQLEDFVFGINCHTTAAKD 115
Y G + + ++ N ++Y+S+ G + LG+ Q+ +
Sbjct: 32 WYAGAGLGQG----HYSNGSNPQSYDSVRDRFAGSVYLGY--QVNPY-LAPELSYQFLGS 84
Query: 116 DSTFYRLKEKYFIYGDV--VLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
Y + + V + GY + + L Y G G +
Sbjct: 85 AYANYEQGQISGDFQQVVLAARFGYPLTTSLYPYVKVGGAGWF------------GDSEG 132
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSNAKSDVERVDRKGNA 231
G S ++ G++Y +S ++Y S+ + +
Sbjct: 133 LRSGSERGFSPIVAAGVEYAFTPRLSGRLEHQYTDSLGADSIGYT-------------DH 179
Query: 232 HIASLGINMHF 242
H+ +LG++ F
Sbjct: 180 HLTTLGLSWRF 190
>gi|144900280|emb|CAM77144.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Magnetospirillum gryphiswaldense MSR-1]
Length = 319
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 50/186 (26%), Gaps = 29/186 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVGL Y P + T + + ++G++ F A
Sbjct: 24 WYVGLDGGANYMQDPGSSTGADSDWGWVGL----GQVGYSFGAPKVEF--EVGYRANDSI 77
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + + + + G G A++ R
Sbjct: 78 DSISTMVNGIYDF--------MPTGKWHPFVGAGIGWAWLDGDFAGNN---------ARN 120
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+G + G+ Y ++ + L A YRY V +N+ D H
Sbjct: 121 SDNGFAYQGIAGVGYDIDNNWGLKAQYRYFATLDADVGTANSG------DSDYRNHSILA 174
Query: 237 GINMHF 242
G F
Sbjct: 175 GFTYKF 180
>gi|320577120|gb|ADW54069.1| outer membrane protein A [Sodalis glossinidius]
Length = 290
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 22/159 (13%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSL 143
G G LG+ + G + K + K Y + D L
Sbjct: 22 GAGAFLGY---QGNPYLGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDL 77
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
IY G ++ + K DN + G S + +GL+Y + + Y
Sbjct: 78 DIYTRLG----GMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDY 133
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ N D V + + + S+G++ F
Sbjct: 134 QWV----------NNIGDAGTVGTRPDNSMLSVGVSYRF 162
>gi|49182348|gb|AAT57676.1| OmpA [Pasteurella multocida]
Length = 349
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 57/206 (27%), Gaps = 45/206 (21%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG D +N+ Y G + +G+
Sbjct: 28 FYVGAKAGWASFH----DGLNQAKYLEAPEATFG------FKRNSVTYGVFGEYQITD-- 75
Query: 117 STFYRLKEKYFIYGDVVLK------------------------AGYSV-DSLLIYGMGGF 151
+ ++ Y +G L+ A Y V D L IY G
Sbjct: 76 --NFAVELGYDDFGRAKLRMAEKDQKAKDAAKHTNHGAHLSLKASYPVLDGLDIYARVGA 133
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + K R S V GL+Y +++L Y+++ +
Sbjct: 134 ALIRSDYKVYDHSDPAKLPQFK-RTHSTQVSPVFAGGLEYAFMPELALRVEYQWVNNVGK 192
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLG 237
+ ERVD + + + G
Sbjct: 193 VKDVLG-----ERVDYRPDIGSVTAG 213
>gi|187478150|ref|YP_786174.1| adhesin/virulence factor [Bordetella avium 197N]
gi|115422736|emb|CAJ49264.1| putative adhesin/virulence factor [Bordetella avium 197N]
Length = 233
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 5/107 (4%)
Query: 141 DSLLIYGMGGFGGAYVI---DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
D +YG G G D + + + + GR + LG+G Y + D+
Sbjct: 127 DKFSLYGSVGLGLTASRMKADFTQTSADEEPQHGSFGRRSQTLFTASLGVGASYALTKDM 186
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVER--VDRKGNAHIASLGINMHF 242
S+ YRYI + + + AH SLG+ F
Sbjct: 187 SVDLGYRYIRMATAKTGALAEEGAEPGAHLHARPEAHEVSLGVRYRF 233
>gi|27367393|ref|NP_762920.1| putative outer membrane protein [Vibrio vulnificus CMCP6]
gi|27358962|gb|AAO07910.1| putative outer membrane protein [Vibrio vulnificus CMCP6]
Length = 204
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 57/193 (29%), Gaps = 20/193 (10%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN-------GLGIELGHNIQLEDFVFGINCHT 110
Y+G + + + + S+ I G+ + +
Sbjct: 24 YLGASLGLASFKNAVGNANTSFGSGSMDLALDDDQSVAGSIYGGYKF---NSFLALEGAI 80
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
Y + + V K +S+ D+ +Y G + +
Sbjct: 81 GGYDALEDTY-VTVGNMYFLSVQPKLSFSLTDTFELYAKAGVAYFNAEFKVSNALVNAPG 139
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ G + G+G + ++ + AS+ ++ + V E + +
Sbjct: 140 YSTLSDSTLTG---MYGLGAELKLSPTFHIRASWDFMRPELDVVKVGT-----ENISIES 191
Query: 230 NAHIASLGINMHF 242
+ + SLG + HF
Sbjct: 192 DISVFSLGASYHF 204
>gi|260433629|ref|ZP_05787600.1| putative outer membrane protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417457|gb|EEX10716.1| putative outer membrane protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 172
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 51/190 (26%), Gaps = 40/190 (21%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G Y G + + +G +G+++ L FV G
Sbjct: 23 DWTGPYAGFTFGYTDA--------DGPGGSGGNSGSIGANIGYDLDLGSFVVGGEFEYDR 74
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D + V L+ GY L Y + G A
Sbjct: 75 LNLD--LGASEGSLDSVSRVKLRGGYEFGPALGYVVVGAARANTS--------------- 117
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
++ V GIG+ Y + + +S + DV R + +
Sbjct: 118 ----SDSDTAAVYGIGVAYPLGDRLIISGEALRQNFN-----------DVTRSRGDLDTN 162
Query: 233 IASLGINMHF 242
+L F
Sbjct: 163 TFNLRTTFRF 172
>gi|148560090|ref|YP_001259543.1| outer surface protein [Brucella ovis ATCC 25840]
gi|148371347|gb|ABQ61326.1| outer surface protein [Brucella ovis ATCC 25840]
Length = 274
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 63/216 (29%), Gaps = 33/216 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+ I + A+ ++ G G + + F+ G
Sbjct: 45 GWYLRGDIGYSWNGFKRAEYAPLGDCDTCNGLGRGGDTLYGDLNGSFLIGGGAGYQVTDY 104
Query: 116 DSTFYRLK--EKYFIYGDVVL-------------KAGYS--------------VDSLLIY 146
T L + G V ++ YS + + Y
Sbjct: 105 FRTDLTLDYMTRSRFSGHVSGPDCNGDTGCASDERSHYSALSILANAYVDLGNLGGVTPY 164
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G GG V S L + S S+ + L G + +++ L A YRY
Sbjct: 165 VGAGIGGTRVNWSDLVDITSGFSQEGAAN---WRFTYALMAGASVDLTHNLKLDAGYRYR 221
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + N +D D+ N H +G+ F
Sbjct: 222 HVNGGKMFEGNQWTDA-GYDKGLNIHDIRVGLRYMF 256
>gi|218676173|ref|YP_002394992.1| outer membrane protein OmpA [Vibrio splendidus LGP32]
gi|218324441|emb|CAV25864.1| outer membrane protein OmpA [Vibrio splendidus LGP32]
Length = 353
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 31/185 (16%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + G GI G+N G+ + D
Sbjct: 28 YVGAKVGMGWLDSACVSGEKCDDD----AIGAGIYSGYNFTD---RLGVELSSDFLGDYK 80
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T + + D L+ + V ++ + + G
Sbjct: 81 TSFSKNGVTSNFS----------DPLIAISLTPMYRLPVQQEFDVFFKAGPAYISHGGET 130
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
S GIGL+ ++ D ++ Y+Y + + N++ ++G
Sbjct: 131 DVVLS--AGIGLEKQLSSDWAVRVEYQYFDDFDDNY------------VQDLNSNFVTVG 176
Query: 238 INMHF 242
++ +F
Sbjct: 177 LSYNF 181
>gi|320577070|gb|ADW54044.1| outer membrane protein A [Sodalis glossinidius]
Length = 267
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 57/192 (29%), Gaps = 33/192 (17%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G Y + D G G LG+ Q + G
Sbjct: 6 TGFY-----GNGF------DNRIANGPTRDDQLGAGAFLGY--QANPY-LGFELGYDWLG 51
Query: 115 ---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ K + K Y + D L IY G ++ + K DN
Sbjct: 52 RMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWRTDSKGAYDNGN 106
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ G S + +GL+Y + + Y+++ N D V + +
Sbjct: 107 AGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNIGDAGTVGTRPD 156
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 157 NSMLSVGVSYRF 168
>gi|212712504|ref|ZP_03320632.1| hypothetical protein PROVALCAL_03599 [Providencia alcalifaciens DSM
30120]
gi|212684720|gb|EEB44248.1| hypothetical protein PROVALCAL_03599 [Providencia alcalifaciens DSM
30120]
Length = 245
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 36/143 (25%), Gaps = 12/143 (8%)
Query: 111 TAAKDDSTFYRLKEKYFI-YGDVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVES 166
+ K I V++ Y + Y G G A +
Sbjct: 104 SFNDPGVLSSSDDAKTDITLNTVMVNTYYDFKNATKFTPYVSVGLGMASINHKMRYDYNE 163
Query: 167 DNSK-------NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + +G+G Y VN SL YR++ N A
Sbjct: 164 HIVSLNQYTHEQYTQSKTTNNFAWSVGLGSQYRVNNHFSLDMGYRFLDAGKSEANY-YAD 222
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
K +H G+ F
Sbjct: 223 DQKNTSKVKVRSHDIMFGVTYRF 245
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 36/119 (30%), Gaps = 9/119 (7%)
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
AG V+SL + G G V + +++ K G + +G D
Sbjct: 18 SSTAIAG--VESLYVSGKMGASIVQVSNQKWLTSDNEFEKTNLGNTHDSVFGGNIAVGYD 75
Query: 191 YMVNYDISLSASYRY-------IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + I H++ S N+ S + + + F
Sbjct: 76 FAKTTKLPIRTELEFGMKEKASINHNLESFNDPGVLSSSDDAKTDITLNTVMVNTYYDF 134
>gi|261856832|ref|YP_003264115.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261837301|gb|ACX97068.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 373
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/205 (14%), Positives = 57/205 (27%), Gaps = 36/205 (17%)
Query: 55 SGNYVGLHISRLYETHP---------LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
SG Y+G + + T + N G + G+ Q + F
Sbjct: 33 SGWYIGANAGQSRATIDNDRITRNLLGSGFTTNALTNDDRSIGYKLYGGY--QFNRY-FA 89
Query: 106 INCHT------TAAKDDSTFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVI 157
+ + L + + G + G D ++G G A
Sbjct: 90 LEGGYFNLGKFGYTAYTTPQGTLTGEIKLQGVNLDVVGLWPITDKFSLFGRVGVNYAKAQ 149
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
D + + + D ++ G+G+ Y + + + A +
Sbjct: 150 DQFVGTGAVLVTNPSPSARD---TNYKFGVGVQYALTESLDVRAEVERYRINDA------ 200
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
V KG+ + S G+ F
Sbjct: 201 -------VGNKGDIDLISAGLVYRF 218
>gi|18307546|emb|CAD21163.1| putative invasin [Salmonella enterica IIIb 50:k:z]
Length = 239
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 64/216 (29%), Gaps = 30/216 (13%)
Query: 56 GNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVF 104
G Y+ + + + + G G+ +G++
Sbjct: 25 GAYITGKAGASVVNLYGINSTFSQDEIVNGHATLPNRTKGVFGGGVAIGYDFYDPFQLPV 84
Query: 105 GINCHTTA-------AKDDSTFYRLKEKYFIYGDVV-----LKAGYSVDS---LLIYGMG 149
+ TT D T + + V + Y + Y
Sbjct: 85 RLELDTTFRGETDAKGGQDITAFGEPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISA 144
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G G A V + + N + + GIG Y V +I++ ASY+YI
Sbjct: 145 GVGLARVKLKNNTIPVGYDI-NETLSASKNNFAWGAGIGAKYAVTDNIAIDASYKYINAG 203
Query: 210 IHSVNNSNAKSDVERV---DRKGNAHIASLGINMHF 242
S++ +N D D K ++ +GI F
Sbjct: 204 KVSISKNNYAGDEHTSYYADTKAASNDFMIGITYAF 239
>gi|328470146|gb|EGF41057.1| putative outer membrane protein [Vibrio parahaemolyticus 10329]
Length = 188
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/195 (10%), Positives = 50/195 (25%), Gaps = 23/195 (11%)
Query: 58 YVGLHIS-------RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
Y+G I + + + G+ + +
Sbjct: 7 YIGASIGKATFDDISGSIKSNTYNASEKLEVKDNESLFGKVFGGYTF---NEYISLEGAI 63
Query: 111 TAAKDDSTFYRLKEKYFIYG---DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ L G D ++ G V +
Sbjct: 64 GGYDALDGSVVTVGDMKFLAIQPKLTLPIG---DRFNLFAKAGLSYFNAEFKVSNSVLTG 120
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ F + + G+G ++ + +++L + Y+ + AK E+V
Sbjct: 121 DE--GHTTFSETTVTGLYGLGAEFAITKNLALQVEWEYMKPELDV-----AKLGSEKVTV 173
Query: 228 KGNAHIASLGINMHF 242
+ S+G++ F
Sbjct: 174 EAEISAFSVGMSYRF 188
>gi|161615525|ref|YP_001589490.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|161364889|gb|ABX68657.1| hypothetical protein SPAB_03297 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 239
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G+N + TT +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYNFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGDPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISVGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKAASNDFMLGITYAF 239
>gi|238913304|ref|ZP_04657141.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 239
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQDEIINGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGQPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKAASNDFMLGITYAF 239
>gi|148265454|ref|YP_001232160.1| surface antigen msp4 family protein [Geobacter uraniireducens Rf4]
gi|146398954|gb|ABQ27587.1| surface antigen msp4 family protein [Geobacter uraniireducens Rf4]
Length = 224
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 55/206 (26%), Gaps = 29/206 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLL-------PNGLGIELGHNIQLEDFVFGINC 108
G YV + + + +G G++ + +
Sbjct: 29 GAYVSGFLGVNVPRDADVTGTDFLIGADIDERVAFDPGLNIGGTGGYDFGIIR----LEG 84
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV------------DSLLIYGMGGFGGAYV 156
+ + + + DV G + Y GG G A +
Sbjct: 85 ELSYKHAEMKSITERASGTRFSDVDGNLGVLAMMFNGFFDLHNSTPVTPYWGGGIGFAAM 144
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S + S + D + G GL+ +N SL YRY +
Sbjct: 145 HLS--DTFVSGDPIPFYQEDDDTVFAYQAGAGLEIALNRQFSLDLGYRYFGTASATFGLD 202
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
D K +H AS+G + F
Sbjct: 203 KDI----TTDLKYESHNASVGFRVKF 224
>gi|4140005|pdb|1BXW|A Chain A, Outer Membrane Protein A (Ompa) Transmembrane Domain
Length = 172
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 30/190 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 8 WYTGAKLG--WSQYHDTGLINNNGPTHENKLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 62
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K + K GY + D L IY G +D N
Sbjct: 63 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLG----------GMVWRADTYSNV 111
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 112 YGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNG 161
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 162 MLSLGVSYRF 171
>gi|83309701|ref|YP_419965.1| Outer membrane protein and related peptidoglycan-associated protein
[Magnetospirillum magneticum AMB-1]
gi|82944542|dbj|BAE49406.1| Outer membrane protein and related peptidoglycan-associated protein
[Magnetospirillum magneticum AMB-1]
Length = 378
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 49/189 (25%), Gaps = 11/189 (5%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVGL S G + + ++
Sbjct: 60 WYVGLDAGAQLLQDSKNSGSGVSGLKSESDVGWLTQGVVGYAFGQWRAEGELSYRSSGVS 119
Query: 117 STFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ Y + G G A + + +++K ++
Sbjct: 120 KVGGATGSGDTSALAPMFNGVYEFLPQSKWHPFVGLGIGAARLDNGTVKKNGANAYSG-- 177
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
D + G+ Y + ++ L A YRY S A S+ ++D + H
Sbjct: 178 ---DDWQFAYQGFAGVGYDLTDNVELKAQYRYF---STLDYESKAASNNAKIDSEYRDHG 231
Query: 234 ASLGINMHF 242
LG F
Sbjct: 232 LMLGFVYKF 240
>gi|148358862|ref|YP_001250069.1| hypothetical protein LPC_0745 [Legionella pneumophila str. Corby]
gi|296106908|ref|YP_003618608.1| hypothetical protein lpa_01960 [Legionella pneumophila 2300/99
Alcoy]
gi|148280635|gb|ABQ54723.1| hypothetical protein LPC_0745 [Legionella pneumophila str. Corby]
gi|295648809|gb|ADG24656.1| hypothetical protein lpa_01960 [Legionella pneumophila 2300/99
Alcoy]
Length = 369
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 53/192 (27%), Gaps = 25/192 (13%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+G+ + L Y+ N+ + V + + T
Sbjct: 193 LGIGGGYRFTNIILPAISVGVYYSHF----------FNMDINGQV------IQYSLPEFT 236
Query: 119 FYRLKEKYF---IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE----SDNSKN 171
Y + K + V + +L+ + GG G + S + +
Sbjct: 237 NYNYQWKVKSDLVLASVKANV-FRWKNLMPFIQGGIGASSNRASQYYENALPDVTPRISP 295
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG-N 230
+ LG GLD+ + LS Y Y + E + K
Sbjct: 296 NFANHTATVFAYQLGAGLDWEIRPQWLLSLGYEYSDLGKVRSGYGTDSWNRETLSSKNLT 355
Query: 231 AHIASLGINMHF 242
++ + GI F
Sbjct: 356 SNAGTFGITYLF 367
>gi|320577062|gb|ADW54040.1| outer membrane protein A [Sodalis glossinidius]
Length = 250
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 27/195 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G + + P G G LG+ Q + G
Sbjct: 1 WYTGSKLGWSQYHDTGFYGNGFDNRIANGPTRDDQLGAGAFLGY--QANPY-LGFELGYD 57
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ K + K Y + D L IY G ++ + K D
Sbjct: 58 WLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWRADSKGAYD 112
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
N + G S + +GL+Y + + Y+++ N D V
Sbjct: 113 NGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNIGDAGTVGT 162
Query: 228 KGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 163 RPDNSMLSVGVSYRF 177
>gi|29654706|ref|NP_820398.1| hypothetical protein CBU_1414 [Coxiella burnetii RSA 493]
gi|161831056|ref|YP_001597253.1| hypothetical protein COXBURSA331_A1575 [Coxiella burnetii RSA 331]
gi|29541974|gb|AAO90912.1| hypothetical exported protein [Coxiella burnetii RSA 493]
gi|161762923|gb|ABX78565.1| hypothetical protein COXBURSA331_A1575 [Coxiella burnetii RSA 331]
Length = 263
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 51/169 (30%), Gaps = 22/169 (13%)
Query: 96 NIQLEDFVFGINCHTTAAKDDSTFYRLKE-------------KYFIYGDVVLKAGYSV-D 141
LE G+ + + D+ G +
Sbjct: 93 RYHLERSYLGLELSAQGNSRQGNNDSVTFVGSGFLFLLQNEFRINSNVDLTGILGTDLTS 152
Query: 142 SLLIYGMGGFGGAYV--IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+YG G A + + + + S + + + + + V G+G+ + ISL
Sbjct: 153 RTHMYGKLGVSYAKLNQKLTVSQWMASSLQTSVQQKLNKNLWGYVAGLGIAEDLGRGISL 212
Query: 200 SASYRYIPHHIHSVNN------SNAKSDVERVDRKGNAHIASLGINMHF 242
A Y Y + + + S+ D+ A+ +G N+ F
Sbjct: 213 FAEYDYYDYGKNDLKTLRNIFPSSVLVDIYTQKVLVGAYTIRVGFNIEF 261
>gi|212703523|ref|ZP_03311651.1| hypothetical protein DESPIG_01568 [Desulfovibrio piger ATCC 29098]
gi|212673023|gb|EEB33506.1| hypothetical protein DESPIG_01568 [Desulfovibrio piger ATCC 29098]
Length = 216
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 56/181 (30%), Gaps = 10/181 (5%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNI--QLE-DFVFGINCHTTAAKDDS-TFYRL 122
Y T + + Y+ G + LG++ Q + + S ++ L
Sbjct: 41 YPTLEVGPDSASENYSQFTLGGA-LALGYDFYSQFGVPVRAEVEYALRGNSEKSWSYDAL 99
Query: 123 KEKYFIYG-DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
K + L Y + + G + + + NA
Sbjct: 100 DVKGAWNASTLFLNLYYDFRNSTAFTPYVGAGLGMAFNYANYTFTTKGYNANFDEHHTTF 159
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ +G G+ Y + ++ YRY+ + ++ +V + + H LG+
Sbjct: 160 AWNVGAGVAYDITDSFAVDLGYRYMNLGYYEMDLPAG----AKVKNQPSNHEFMLGLRYT 215
Query: 242 F 242
F
Sbjct: 216 F 216
>gi|229485743|sp|P0C8Z2|OMPA_ESCFE RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|146991|gb|AAA24236.1| outer membrane protein II [Escherichia fergusonii]
gi|146999|gb|AAA24240.1| outer membrane protein II [Escherichia fergusonii]
Length = 243
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 16/112 (14%)
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K GY + D L IY G + V ++ KN G S V G++
Sbjct: 1 LTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESEKN-----HDTGVSPVFAGGVE 55
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + +I+ Y++ +N D + + + + SLG++ F
Sbjct: 56 WAITPEIATRLEYQW----------TNNIGDANTIGTRPDNGLLSLGVSYRF 97
>gi|168819104|ref|ZP_02831104.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205343988|gb|EDZ30752.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320084561|emb|CBY94353.1| Opacity protein opA58 Flags: Precursor [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 239
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGDPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFDI 164
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 165 -NETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKAASNDFMLGITYAF 239
>gi|254361457|ref|ZP_04977597.1| outer membrane protein OmpA [Mannheimia haemolytica PHL213]
gi|153092967|gb|EDN73993.1| outer membrane protein OmpA [Mannheimia haemolytica PHL213]
Length = 230
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 5/66 (7%)
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIP-----HHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S++LG GL+Y + +++ Y+Y+ + H S
Sbjct: 21 SLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAVRTTVGYLIPRGTNFQYSPDIHSVSA 80
Query: 237 GINMHF 242
G++ F
Sbjct: 81 GLSYRF 86
>gi|330721973|gb|EGG99910.1| Outer membrane protein W precursor [gamma proteobacterium IMCC2047]
Length = 207
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 2/98 (2%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D S + + N D + G+DY +N SL+A Y
Sbjct: 112 PYIGAGINYTIFFDESADSQFEAIAGNTDVDLDDS-WGLAFHAGIDYKLNDKWSLNAGYW 170
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ + A V++VD + + +G++ F
Sbjct: 171 YLDIDTEAT-LKTAGVGVQKVDVDIDPDVYMIGLSYKF 207
>gi|16759301|ref|NP_454918.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29142926|ref|NP_806268.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213163732|ref|ZP_03349442.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213421110|ref|ZP_03354176.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
gi|213425134|ref|ZP_03357884.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213585681|ref|ZP_03367507.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|213621844|ref|ZP_03374627.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|213646043|ref|ZP_03376096.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|213852831|ref|ZP_03382363.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
gi|289826866|ref|ZP_06545776.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|25513091|pir||AH0541 probable outer membrane adhesin STY0351 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16501592|emb|CAD08776.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138558|gb|AAO70128.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 239
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQEEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGQPVHINVKNQVRMTTYIVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKAASNDFMLGITYAF 239
>gi|167624709|ref|YP_001675003.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167354731|gb|ABZ77344.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 321
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 50/190 (26%), Gaps = 51/190 (26%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + ++ N ++ G+ LG+NI + + +
Sbjct: 33 FYFGGKLGG---VLLDSEEPLEPGENKMVNLSSGLTLGYNI---NSYLSVETDMSYLGQY 86
Query: 117 STFYRLKEKYFIYG----DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
++K + D +Y G S
Sbjct: 87 QDELSGEDKNLFAIGASLSTRYRLS---DDAALYVKLGPAWVEDNVSLSS---------- 133
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G+G+ Y ++ + L + YR+I + + +
Sbjct: 134 -------------GLGIKYRLSPNWELDSGYRWI---------------KDTPSTDDDLY 165
Query: 233 IASLGINMHF 242
+LGIN F
Sbjct: 166 EFTLGINYKF 175
>gi|90414598|ref|ZP_01222571.1| hypothetical protein P3TCK_14434 [Photobacterium profundum 3TCK]
gi|90324314|gb|EAS40883.1| hypothetical protein P3TCK_14434 [Photobacterium profundum 3TCK]
Length = 182
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 69/189 (36%), Gaps = 32/189 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAK 114
G Y+G + ++ ++ +++++ G+G+ G+N Q+ + V G+ +
Sbjct: 24 GFYIGTDLG--------SNRLDSESFDT----GIGLVAGYNFQITQQIVIGVEGEYRSYG 71
Query: 115 DDSTFYRLKEKYFIYGDVVLK-AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D + ++ G +V + + GA + S+++ ++
Sbjct: 72 KDK----VTIIDGWSAELKAHSFGINVKPKYYFNDNFYAGAQLGLHSVKEEFKEDILGDV 127
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+F + + G+ Y N ++++ A Y+ VE + +
Sbjct: 128 EKFSDSDTGLSYGLEAGYDFNQNVTIKAGYK--------------AISVEPLGVDSDYST 173
Query: 234 ASLGINMHF 242
+G N F
Sbjct: 174 FYIGANYKF 182
>gi|13473322|ref|NP_104889.1| hypothetical protein mll3878 [Mesorhizobium loti MAFF303099]
gi|14024071|dbj|BAB50675.1| mll3878 [Mesorhizobium loti MAFF303099]
Length = 277
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 34/104 (32%), Gaps = 3/104 (2%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
+ + Y G GGA V ++ N+ + L G Y + I
Sbjct: 154 TWHGITPYVGAGIGGARVKWDTVYDP---NTAETNPGASNWRFAYALMAGASYCLTDKII 210
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L A YR+ + +A S DR N H G+ F
Sbjct: 211 LDAGYRFSHIQGGRMFEWDASSAGPGFDRGINTHEVRGGLRYQF 254
>gi|218533179|ref|YP_002423995.1| hypothetical protein Mchl_5305 [Methylobacterium chloromethanicum
CM4]
gi|218525482|gb|ACK86067.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 287
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/262 (14%), Positives = 68/262 (25%), Gaps = 39/262 (14%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
+ S+ VP + A DL P + G Y+ +
Sbjct: 14 LTLVASVGVPCLAQAADLLPPPPMPEPLPEPEVFA---------GGWYLRVDGGYGSLDL 64
Query: 71 PLAD---------TINRKTYNSLLPNGLGIELGHNIQLEDFV-------FGINCHTTAAK 114
+ + + N I G Q+ ++ + T
Sbjct: 65 RKSIAEDVSHPPKPYDYAVVQDKVSNQYFIGGGVGYQINPWLRVDATGEYRFRSKWTFVA 124
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYS--------VDSLLIYGMGGFGGAYVIDSSLEKVES 166
+D TF G G + + + G G A+ +
Sbjct: 125 EDKTFGDTGGYNVTSGKFDSIVGLANGYVDLGTWYGVTPFVGAGVGVAHHSFGGVTDKGF 184
Query: 167 DNSKNAKG---RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ G + + L GL Y V +I A+YRY+ + D
Sbjct: 185 GAYEGGYGIGRHNERTNFAWALHAGLGYAVTQNIRFEAAYRYLNMGEATTGVVTCAPDCP 244
Query: 224 RVDRKGN---AHIASLGINMHF 242
+ + AH +G+ F
Sbjct: 245 KTVYRVKELEAHDVKVGLRYLF 266
>gi|322614599|gb|EFY11528.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322620118|gb|EFY16990.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322623412|gb|EFY20251.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629290|gb|EFY26069.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632010|gb|EFY28764.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637252|gb|EFY33954.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642449|gb|EFY39051.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646297|gb|EFY42811.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322652434|gb|EFY48788.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653404|gb|EFY49737.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660448|gb|EFY56684.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664600|gb|EFY60793.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669347|gb|EFY65497.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670893|gb|EFY67026.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678868|gb|EFY74923.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681897|gb|EFY77922.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322688023|gb|EFY83989.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323194378|gb|EFZ79573.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197793|gb|EFZ82925.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203411|gb|EFZ88436.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206844|gb|EFZ91797.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210387|gb|EFZ95279.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214629|gb|EFZ99380.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323223185|gb|EGA07528.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224844|gb|EGA09107.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230048|gb|EGA14168.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233786|gb|EGA17875.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238520|gb|EGA22578.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244208|gb|EGA28217.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246368|gb|EGA30351.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323251994|gb|EGA35857.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257991|gb|EGA41670.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323259912|gb|EGA43543.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265074|gb|EGA48573.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272637|gb|EGA56044.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 239
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGQPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKAASNDFMLGITYAF 239
>gi|194444662|ref|YP_002039548.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194403325|gb|ACF63547.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
Length = 239
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGQPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKAASNDFMLGITYAF 239
>gi|56414566|ref|YP_151641.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|168238589|ref|ZP_02663647.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194734644|ref|YP_002113331.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197363496|ref|YP_002143133.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|204927007|ref|ZP_03218209.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|56128823|gb|AAV78329.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|194710146|gb|ACF89367.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197094973|emb|CAR60510.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197288560|gb|EDY27937.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|204323672|gb|EDZ08867.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
Length = 239
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGQPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKAASNDFMLGITYAF 239
>gi|240141694|ref|YP_002966174.1| hypothetical protein MexAM1_META1p5295 [Methylobacterium extorquens
AM1]
gi|240011671|gb|ACS42897.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 287
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/262 (14%), Positives = 68/262 (25%), Gaps = 39/262 (14%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
+ S+ VP + A DL P + G Y+ +
Sbjct: 14 LTLLASVGVPCLAQAADLLPPPPMPEPLPEPEVFA---------GGWYLRVDGGYGSLDL 64
Query: 71 PLAD---------TINRKTYNSLLPNGLGIELGHNIQLEDFV-------FGINCHTTAAK 114
+ + + N I G Q+ ++ + T
Sbjct: 65 RKSIAEDVSHPPKPYDYAVVQDKVSNQYFIGGGVGYQINPWLRVDATGEYRFRSKWTFVA 124
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYS--------VDSLLIYGMGGFGGAYVIDSSLEKVES 166
+D TF G G + + + G G A+ +
Sbjct: 125 EDKTFGDTGGYNVTSGKFDSIVGLANGYVDLGTWYGVTPFVGAGVGVAHHSFGGVTDKGF 184
Query: 167 DNSKNAKG---RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ G + + L GL Y V +I A+YRY+ + D
Sbjct: 185 GAYEGGYGIGRHNERTNFAWALHAGLGYAVTQNIRFEAAYRYLNMGEATTGVVTCAPDCP 244
Query: 224 RVDRKGN---AHIASLGINMHF 242
+ + AH +G+ F
Sbjct: 245 KTVYRVKELEAHDVKVGLRYLF 266
>gi|168465379|ref|ZP_02699261.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195631629|gb|EDX50149.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 239
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKSGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGDPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKAASNDFMLGITYAF 239
>gi|62178877|ref|YP_215294.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62126510|gb|AAX64213.1| sapA-like protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322713329|gb|EFZ04900.1| sapA-like protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 239
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K I + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGDPVHINVKNQIRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKVASNDFMLGITYAF 239
>gi|154705982|ref|YP_001423991.1| hypothetical protein CBUD_0582 [Coxiella burnetii Dugway 5J108-111]
gi|154355268|gb|ABS76730.1| hypothetical exported protein [Coxiella burnetii Dugway 5J108-111]
Length = 263
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 9/129 (6%)
Query: 123 KEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYV--IDSSLEKVESDNSKNAKGRFDGH 179
+ + D+ G + +YG G A + + + + S + + + + +
Sbjct: 133 EFRINSNVDLTGILGTDLTSRTHMYGKLGVSYAKLNQKLTVSQWMASSLQTSVQQKLNKN 192
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN------SNAKSDVERVDRKGNAHI 233
V G+G+ + ISL A Y Y + + + S+ D+ A+
Sbjct: 193 LWGYVAGLGIAEDLGRGISLFAEYDYYDYGKNDLKTLRNIFPSSVLVDIYTQKVLVGAYT 252
Query: 234 ASLGINMHF 242
+G N+ F
Sbjct: 253 IRVGFNIEF 261
>gi|145639315|ref|ZP_01794921.1| Outer membrane protein P5 [Haemophilus influenzae PittII]
gi|145271618|gb|EDK11529.1| Outer membrane protein P5 [Haemophilus influenzae PittII]
Length = 361
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/206 (12%), Positives = 62/206 (30%), Gaps = 31/206 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G+ + ++ + LG + + F +G+ D
Sbjct: 28 FYAGVKAGQASFHD------GINNNGAIKKDLLGGLASYGYRRNTFTYGVFGGYQILNQD 81
Query: 117 STFYRLKEKYFIYGDVVLKA-------------------GYSV-DSLLIYGMGGFGGAYV 156
+ + Y +G L+ Y V D L +YG G
Sbjct: 82 NFGLAAELGYDNFGRAKLRLEGKPKAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRS 141
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +++ +++ K +S + +G +Y V ++++ Y+++
Sbjct: 142 DYKFYD--DANGTRDHKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYR 196
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + GI+ F
Sbjct: 197 PQDKPNTAINYNPWIGSINAGISYRF 222
>gi|146983|gb|AAA24232.1| outer membrane protein II [Escherichia fergusonii]
Length = 243
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 16/112 (14%)
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K GY + D L IY G + V ++ KN G S V G++
Sbjct: 1 LTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESDKN-----HDTGVSPVFAGGVE 55
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + +I+ Y++ +N D + + + + SLG++ F
Sbjct: 56 WAITPEIATRLEYQW----------TNNIGDANTIGTRPDNGLLSLGVSYRF 97
>gi|78222022|ref|YP_383769.1| tia invasion determinant-related protein [Geobacter metallireducens
GS-15]
gi|78193277|gb|ABB31044.1| tia invasion determinant-related protein [Geobacter metallireducens
GS-15]
Length = 219
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 65/203 (32%), Gaps = 27/203 (13%)
Query: 56 GNYVGLHISRLYET-HPLADTINRKTYNS----LLPNGLGIELGHNIQLEDFVFGINCHT 110
G Y + +A T + ++N +G G++ +
Sbjct: 28 GGYFSGFLGVSIPRDADVAGTDSGTSFNDRVEFDPGIVVGGTAGYDYGF----LRLEGEL 83
Query: 111 TA------AKDDSTFYRLKEKYFIYGDVVLKAGYSVD-----SLLIYGMGGFGGAYVIDS 159
+ + S YR G + + A VD + Y GG G A +
Sbjct: 84 SYRHSEIKSVTASDGYRFHGVDGDLGALAVMANAFVDMHNQSPITPYVGGGVGFAVLNLG 143
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ E D + D + G G++ +N +SL YRY + + +
Sbjct: 144 NTTSTELDPL---YEKGDDTVFAYQAGAGVEIALNPIMSLDLGYRYFGTSKATFD----E 196
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
V + +H A +G+ + F
Sbjct: 197 GVVTATKFRFESHNALMGLRVKF 219
>gi|306841408|ref|ZP_07474110.1| outer surface protein [Brucella sp. BO2]
gi|306288514|gb|EFM59866.1| outer surface protein [Brucella sp. BO2]
Length = 274
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 63/216 (29%), Gaps = 33/216 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+ I + A+ ++ G G + + F+ G
Sbjct: 45 GWYLRGDIGYSWNGFKRAEYAPLGDCDTCNGLGRGGDTLYGDLNGSFLIGGGAGYQVTDY 104
Query: 116 DSTFYRLK--EKYFIYGDVVL-------------KAGYS--------------VDSLLIY 146
T L + G V ++ YS + + Y
Sbjct: 105 FRTDLTLDYMTRSRFSGHVSGPDCNGDTGCASDERSHYSALSILANAYVDLGNLGGVTPY 164
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G GG V S L + S S+ + L G + +++ L A YRY
Sbjct: 165 VGAGIGGTRVNWSDLVDMASGFSQEGAAN---WRFTYALMAGASVDLTHNLKLDAGYRYR 221
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + N +D D+ N H +G+ F
Sbjct: 222 HVNGGKMFEGNQWTDA-GYDKGLNIHDIRVGLRYMF 256
>gi|129138|sp|P24754|OMPA_ESCHE RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|146987|gb|AAA24234.1| outer membrane protein II [Escherichia hermannii]
gi|146995|gb|AAA24238.1| outer membrane protein II [Escherichia hermannii]
Length = 243
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 19/113 (16%)
Query: 132 VVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ K GY + D L IY GG + + A + G S V GL
Sbjct: 1 LTAKLGYPITDELDIYTRLGGMVW-------RADSKYNIPGGASFKDHDTGVSPVFAGGL 53
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ V DI+ Y++ +N D V + + + S+G++ F
Sbjct: 54 EWAVTRDIATRLEYQW----------TNNIGDANTVGTRPDNGLLSVGVSYRF 96
>gi|269137603|ref|YP_003294303.1| hypothetical protein ETAE_0245 [Edwardsiella tarda EIB202]
gi|267983263|gb|ACY83092.1| hypothetical protein ETAE_0245 [Edwardsiella tarda EIB202]
gi|304557672|gb|ADM40336.1| porin opacity type [Edwardsiella tarda FL6-60]
Length = 210
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 63/199 (31%), Gaps = 27/199 (13%)
Query: 55 SGNYVGLHISRLYETH-PLADTINRKTYNSLLPNG-LGIELGHNIQLE-DFVFGINCHTT 111
+G Y G + E D N G G+ G+N + + T
Sbjct: 28 TGYYAGAKMGISAEHLFDQKDVNGNGMSNDNKGVGNAGLVFGYNFENQFSLPVRAELDYT 87
Query: 112 A---AKDDSTFYRLKEKYFIYGDVVLKA-GY----SVDSLLIYGMGGFGGAYVIDSSLEK 163
A T + G L GY + Y G G A V +
Sbjct: 88 FRANATSSHTNDAAETNDSRLGLQTLMVNGYYDIKTGTPFTPYVGAGIGYANVSLKNDMN 147
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
++ + + + + +G G+ Y VN + L Y+Y+ S NS A
Sbjct: 148 GDNV-------QSNSNNFAWSVGTGVIYNVNERLDLDLGYKYLDAGKASAGNSQA----- 195
Query: 224 RVDRKGNAHIASLGINMHF 242
K H +LG+N +F
Sbjct: 196 ----KVTTHDVTLGVNYYF 210
>gi|99032472|pdb|2GE4|A Chain A, High-Resolution Solution Structure Of Outer Membrane
Protein A Transmembrane Domain
Length = 177
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 30/190 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 8 WYTGAKLG--FSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDFLGRM 62
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K + K GY + D L IY G +D N
Sbjct: 63 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVFR----------ADTKSNV 111
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 112 YGKNHDTGVSPVFAGGVEYAITPEIATRLEYQF----------TNNIGDAHTIGTRPDNG 161
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 162 MLSLGVSYRF 171
>gi|9256903|pdb|1QJP|A Chain A, High Resolution Structure Of The Outer Membrane Protein A
(Ompa) Transmembrane Domain
Length = 171
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 61/189 (32%), Gaps = 28/189 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + + + IN G G G+ Q+ +V G
Sbjct: 7 WYTGAKLG--WSQYHDTGLINNNGPTHENKLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 61
Query: 117 STFYRLKEKYFIYGDV--VLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
++ + V K GY + D L IY G +D N
Sbjct: 62 PYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLG----------GMVWRADTYSNVY 111
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ +N D + + + +
Sbjct: 112 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNGM 161
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 162 LSLGVSYRF 170
>gi|16763689|ref|NP_459304.1| adhesin/invasin protein PagN [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167993323|ref|ZP_02574418.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168240044|ref|ZP_02664976.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168261280|ref|ZP_02683253.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|194447578|ref|YP_002044291.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197266028|ref|ZP_03166102.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198244187|ref|YP_002214261.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|207855791|ref|YP_002242442.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|81523864|sp|Q8ZRJ9|PAGN_SALTY RecName: Full=Outer membrane protein PagN; AltName:
Full=Adhesin/invasin protein PagN; Flags: Precursor
gi|16418808|gb|AAL19263.1| homolog of sapA [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194405882|gb|ACF66101.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197244283|gb|EDY26903.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197938703|gb|ACH76036.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205328580|gb|EDZ15344.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205339886|gb|EDZ26650.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205349833|gb|EDZ36464.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707594|emb|CAR31876.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261245532|emb|CBG23326.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267991998|gb|ACY86883.1| SapA-like protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301156922|emb|CBW16403.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312911275|dbj|BAJ35249.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321224967|gb|EFX50028.1| Peptide transport periplasmic protein sapA [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323128624|gb|ADX16054.1| SapA-like protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|326622004|gb|EGE28349.1| SapA-like protein [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
gi|332987255|gb|AEF06238.1| SapA-like protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 239
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGDPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKAASNDFMLGITYAF 239
>gi|195940407|ref|ZP_03085789.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4024]
Length = 267
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 23/113 (20%)
Query: 132 VVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ K GY + D L IY GG +D N G+ G S V G+
Sbjct: 21 LTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSNVYGKNHDTGVSPVFAGGV 69
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y + +I+ Y++ +N D + + + + SLG++ F
Sbjct: 70 EYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNGMLSLGVSYRF 112
>gi|189475074|gb|ACE00211.1| OmpA [Vibrio alginolyticus]
Length = 330
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 49/184 (26%), Gaps = 32/184 (17%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR 121
HI L D + G G+ +G++ + G+
Sbjct: 27 HIGGKVGMTTLDDACYLNSPCDDEAFGAGLHIGYDFTD---IIGLEYGVDFLG------- 76
Query: 122 LKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
G+ A ++D L + ++ S D
Sbjct: 77 -----DYEGNSRSGANTINTIDGNLTALTLAPKFNWHLNDSWNLFAKIGGAYMMSD-DET 130
Query: 180 GSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+G +Y ++ + S+ A Y RY + +A+ +G+
Sbjct: 131 DFVPTGSLGAEYSIDRNWSVRAEYQRYQDMSDDVWD-------------DMDANFFGIGV 177
Query: 239 NMHF 242
N F
Sbjct: 178 NYKF 181
>gi|200389864|ref|ZP_03216475.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199602309|gb|EDZ00855.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 239
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGDPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKAASNDFMLGITYAF 239
>gi|269104129|ref|ZP_06156825.1| transporter [Photobacterium damselae subsp. damselae CIP 102761]
gi|268160769|gb|EEZ39266.1| transporter [Photobacterium damselae subsp. damselae CIP 102761]
Length = 201
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 60/192 (31%), Gaps = 20/192 (10%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G Y+G++I P + +Y G GI+ G+ Q + +G+
Sbjct: 26 AGPYIGVNIGSGGMDTPDLEVNQTSSYELRGLAG-GIDAGYLWQTQQVEYGVELGFDTYA 84
Query: 115 DDSTFYRLKEKYFIYG---DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + G D++ A Y+ ++G G +
Sbjct: 85 KNKYRIGDFFRMDYKGYNLDLLGVAKYNFSSQWNVFGKAGLAYVNQKLTVDGL------- 137
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ + + +G Y ++ ++A Y ++ + S+
Sbjct: 138 -GLIGKNKNEIKPKVALGFGYDFTPELGMNAEYSHVFAGDANSLKSDGTKVAS------- 189
Query: 231 AHIASLGINMHF 242
+ +LG+ F
Sbjct: 190 VDMLTLGVQYRF 201
>gi|260914347|ref|ZP_05920816.1| outer membrane protein A [Pasteurella dagmatis ATCC 43325]
gi|260631448|gb|EEX49630.1| outer membrane protein A [Pasteurella dagmatis ATCC 43325]
Length = 341
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 57/191 (29%), Gaps = 18/191 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSL---LPNGLGIELGHNIQLEDFVFGINCHTTAA 113
YVG L ++ G+ G+ I V
Sbjct: 28 FYVGTKAGWASFHDGLNQLDSKNGGPVGIKRNSVTYGVFGGYQITDNFAVELGYDDFGRV 87
Query: 114 KDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKN 171
K + K +G + LKA Y V + L Y G + +
Sbjct: 88 KGVNKAENFSAKMTNHGTHLSLKASYPVIADLDAYARVGAALIRSDYKAKGTKD------ 141
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
R S V G++Y + +++ Y+++ + + +N +R+D +
Sbjct: 142 --ARAHSLKVSPVFAGGIEYAILPELAARLEYQWVN-GVGKLEKANG----DRLDFTPSV 194
Query: 232 HIASLGINMHF 242
S G+ F
Sbjct: 195 GSVSAGLTYRF 205
>gi|156739548|gb|ABU93434.1| Omp25 [Brucella abortus]
gi|156739556|gb|ABU93438.1| Omp25 [Brucella abortus]
gi|156739560|gb|ABU93440.1| Omp25 [Brucella melitensis]
gi|156739564|gb|ABU93442.1| Omp25 [Brucella melitensis]
gi|156739578|gb|ABU93449.1| Omp25 [Brucella melitensis]
gi|156739582|gb|ABU93451.1| Omp25 [Brucella melitensis]
gi|156739584|gb|ABU93452.1| Omp25 [Brucella melitensis]
gi|156739588|gb|ABU93454.1| Omp25 [Brucella melitensis]
gi|156739592|gb|ABU93456.1| Omp25 [Brucella suis]
gi|156739598|gb|ABU93459.1| Omp25 [Brucella suis]
gi|156739620|gb|ABU93470.1| Omp25 [Brucella pinnipedialis]
gi|156739622|gb|ABU93471.1| Omp25 [Brucella pinnipedialis]
gi|156739624|gb|ABU93472.1| Omp25 [Brucella pinnipedialis]
gi|156739626|gb|ABU93473.1| Omp25 [Brucella pinnipedialis]
Length = 64
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 24/74 (32%), Gaps = 11/74 (14%)
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K G + + GY ++ ++ Y G G+ + + N
Sbjct: 1 VKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGW 49
Query: 184 VLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 50 TAGAGLEAKLTDNI 63
>gi|147001|gb|AAA24241.1| outer membrane protein II [Escherichia vulneris]
Length = 244
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 16/112 (14%)
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K GY + D L IY G + A + G S V G++
Sbjct: 1 LTAKLGYPITDDLDIYTRLGGMVWRADAKAQVPGTG-----ASFKDHDTGVSPVFAGGVE 55
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + DI+ Y+++ N D + + + + + S+G++ F
Sbjct: 56 WAMTRDIATRLEYQWV----------NNIGDAKTLGTRQDNGMLSVGVSYRF 97
>gi|330812024|ref|YP_004356486.1| outer membrane protein W [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380132|gb|AEA71482.1| putative outer membrane protein W [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 232
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G ++ D + S N + + G + +G DYM+ +I ++ R
Sbjct: 135 PYVGAGINYTWIYDEHVGSEASANGFSNFRASNSWGMAWQVGA--DYMLTDNIMINGQIR 192
Query: 205 YIPHHIHSVNNSNAKSDVER--VDRKGNAHIASLGINMHF 242
YI + ++NA + R V+ + I +G+ F
Sbjct: 193 YIDIDTTAYVDNNAVAGGTRAKVNVDVDPWIYMVGLGYKF 232
>gi|237731623|ref|ZP_04562104.1| outer membrane protein A [Citrobacter sp. 30_2]
gi|226907162|gb|EEH93080.1| outer membrane protein A [Citrobacter sp. 30_2]
Length = 348
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/199 (11%), Positives = 55/199 (27%), Gaps = 38/199 (19%)
Query: 57 NYVGLHIS---RLYETHPLADTINRKTYNSLLPN----GLGIELGHNIQLEDFVFGINCH 109
Y G + N Y + + G G+ G+ Q+ + +
Sbjct: 28 WYAGGKFGWSHYFDTSASQQTGANGNKYGDVGFDSDNVGGGVFTGY--QITPW-LAVEGG 84
Query: 110 TTAAKD------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
+ + + + + G + D+ +YG G G
Sbjct: 85 YDYLGNMQFNGKNGASGSQMKSQGLQLSLKASYGLT-DNWDLYGRAGAMGYRAESDIKGN 143
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
D G V+ +G +Y N + + Y+++ + +
Sbjct: 144 NRFD-----------TGVRPVVAVGTEYAFNKNWAGRVEYQWV----------SNVGNEN 182
Query: 224 RVDRKGNAHIASLGINMHF 242
++ + + G++ F
Sbjct: 183 QIGVSSDVSSVTAGLSYRF 201
>gi|212633150|ref|YP_002309675.1| OmpA-like transmembrane region [Shewanella piezotolerans WP3]
gi|212554634|gb|ACJ27088.1| OmpA-like transmembrane region [Shewanella piezotolerans WP3]
Length = 184
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 49/187 (26%), Gaps = 30/187 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y G I G G+N ++ FG+ D
Sbjct: 28 GAYAGGQIGAFSADLEGGSE---------SGQSYGAYGGYN--FNEW-FGLEGALYLTND 75
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ D+ +YG G + ++A
Sbjct: 76 FIDEGEATANALSFSAAPKFTWVINDTFSLYGKVGIA-----------SAAIVIESALPD 124
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
D G + G G++ + +++ Y ++ + S + D +
Sbjct: 125 IDYTGVGLTYGAGVNAAITEKLTVRLGYDFMSATLESDDFDLP-------DADVEFSNVT 177
Query: 236 LGINMHF 242
LG++ F
Sbjct: 178 LGMHYQF 184
>gi|189219071|ref|YP_001939712.1| hypothetical protein Minf_1059 [Methylacidiphilum infernorum V4]
gi|189185929|gb|ACD83114.1| Conserved hypothetical protein [Methylacidiphilum infernorum V4]
Length = 377
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/251 (13%), Positives = 66/251 (26%), Gaps = 44/251 (17%)
Query: 29 YLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY----ETHPLADTINRKTYNSL 84
+ + + E + +G Y G+ + L
Sbjct: 134 TKEQPGSKNPKEISKEEVLGPK----TGIYFGVFGGAAFPMSNGISALNSPPLFSAGGQT 189
Query: 85 LPNGLGI---ELGHNI-----------------QLEDFVFGINCHTTAAKDDSTFYRLKE 124
+ G+ ++G+N Q E + G + ++
Sbjct: 190 HGDTAGVGGVQVGYNFSGYKLDSQGKYWLQPAAQFEAYYIGQE-NISSTLVGGVAGTPMT 248
Query: 125 KYFIYGDVVLKAGYSVDSLL----------IYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ L G V L Y GG GGAY+ S + + + G
Sbjct: 249 HTPYAFNTELNMGIFVADGLIRFVNPTKIVPYLGGGIGGAYLASSGTNMIAPNGANLLFG 308
Query: 175 RFDGHGSSVVLG---IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ +G G+ Y S Y+ + + + + +
Sbjct: 309 --HSYSQGAFVGQGLAGVQYNFTDHWSAFIEYKILWIKETEFSYLMFSGNSMLIKYPQSF 366
Query: 232 HIASLGINMHF 242
++A GI +F
Sbjct: 367 NMALGGIRYNF 377
>gi|147886295|gb|ABQ52380.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin]
Length = 229
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+S+ + G S V G++Y + +I+ Y++ +N D
Sbjct: 4 ADTKSNVPGGPSTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGD 53
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + + S+G++ F
Sbjct: 54 ANTIGTRPDNGLLSVGVSYRF 74
>gi|152992453|ref|YP_001358174.1| hypothetical protein SUN_0859 [Sulfurovum sp. NBC37-1]
gi|151424314|dbj|BAF71817.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 222
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 70/218 (32%), Gaps = 36/218 (16%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYE--THPLADTINR-----KTYNSLLPNGLGIE 92
VE E + S YVGL S L T L + + + ++
Sbjct: 26 PIVPVEEPIVETPVNSAFYVGLGYSYLSSNRTAKLNKPGDPRHGQVVKDTDSNADNILLQ 85
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTF-----YRLKEKYFIYGDVVL---KAGYSVDSLL 144
+G+ Q + + T + D + +KE I + K Y +
Sbjct: 86 VGY--QFNPY-LALEGRYTFSVGDHSLTHNHLGGIKEDVDIDISNMALYIKPMYPIGDFS 142
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
IYG+ G+ KVE + + +DG G G G+ Y + D S+ Y
Sbjct: 143 IYGLLGY----------GKVERERHEEPYRSWDGSGFQW--GAGVQYAIGDDFSVFVDY- 189
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + S+GI+ F
Sbjct: 190 -----TRWYDEEGEPHERLPRLLDTDFSVLSVGISYRF 222
>gi|217971759|ref|YP_002356510.1| OmpA domain-containing protein transmembrane region-containing
protein [Shewanella baltica OS223]
gi|217496894|gb|ACK45087.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS223]
Length = 192
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 53/188 (28%), Gaps = 31/188 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG + L ++ K + + +G+ + I
Sbjct: 35 GIYVGANYGYL--------KVDGKDDFDDNSDVIQGLVGYRF---NQYLAIEG--GYVNF 81
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
L LK Y + D + +Y GG L
Sbjct: 82 GDYGNSLSNAETDGYTAALKVSYPIVDRVELYAKGGQLWYSTDYDVLGFSG--------- 132
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ V +G G+ + V ++A Y + I N SN D + A
Sbjct: 133 --NKDDEGVFVGAGVAFKVTDRFLINAEYTWYDAGITVENVSNG------ADTDTDFKQA 184
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 185 SLGVEYRF 192
>gi|293395760|ref|ZP_06640042.1| outer membrane protein A [Serratia odorifera DSM 4582]
gi|291421697|gb|EFE94944.1| outer membrane protein A [Serratia odorifera DSM 4582]
Length = 352
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/199 (11%), Positives = 53/199 (26%), Gaps = 38/199 (19%)
Query: 57 NYVGLHISR-----LYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCH 109
Y G + +D ++ T + G+ G+ Q+ + +
Sbjct: 28 WYGGAKLGWSHYFDASADKDFSDNLDHATDFDFNKDNTTGGVFAGY--QINSW-LAVEGG 84
Query: 110 TTAAK---DDSTFYRLKEKYFIYG---DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
+ K G + G + D+ +YG G
Sbjct: 85 YDYLGNMQINGNNGVAGAKLASQGLQLSMKASYGLT-DNWDLYGRAGAMAYRAETEHAGH 143
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ G + +G +Y N + + Y+++ + +V
Sbjct: 144 SAFE-----------TGVRPLAAVGTEYAFNDNWAGRVEYQWV----------SNVGNVN 182
Query: 224 RVDRKGNAHIASLGINMHF 242
++ + + G+ F
Sbjct: 183 QIGVSADVSSLTAGVVYRF 201
>gi|90407861|ref|ZP_01216037.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90311036|gb|EAS39145.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 339
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 26/167 (15%)
Query: 42 NNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
++ + W Y GL + T + + G G+ LG+N D
Sbjct: 15 SSTAFAAHTDNDW---YTGLRLGATDYT-DYKISGGESSSAIDANIGGGLFLGYN--FVD 68
Query: 102 FVFGINCHTTAAKDDSTFYRLKE-KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
+ F + T + T ++ + G L+ + D+L ++ G G
Sbjct: 69 W-FALEGGYTYLGELETSEKITNHALELVGKFTLQ---ATDNLDLFVKAGAFGYKTDAD- 123
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
+ G + G G +Y N ++S Y+Y
Sbjct: 124 --------------SANDDGFNATAGFGAEYFFNDNVSTRLEYQYYN 156
>gi|254564202|ref|YP_003071297.1| hypothetical protein METDI5895 [Methylobacterium extorquens DM4]
gi|254271480|emb|CAX27495.1| conserved hypothetical protein; omp like [Methylobacterium
extorquens DM4]
Length = 287
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 66/262 (25%), Gaps = 39/262 (14%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
+ S+ VP + A DL P + G Y+ +
Sbjct: 14 LTLLASVGVPCLAQAADLLPPPPMPEPLPEPEVFA---------GGWYLRVDGGYGSLDL 64
Query: 71 PLAD---------TINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTA-------- 112
+ + + N I G Q+ ++
Sbjct: 65 RKSIAEDVSHPPKPYDYAVVQDKVSNQYFIGGGVGYQINPWLRVDATGEYRFRSKWTFVA 124
Query: 113 -AKDDSTFYRLKEKYFIYGDVVLKA-GY----SVDSLLIYGMGGFGGAYVIDSSLEKVES 166
K + +V GY + + + G G A+ +
Sbjct: 125 EDKTFGDTGGYNVTSGKFDSIVGLVNGYVDLGTWYGVTPFVGAGVGVAHHSFGGVTDKGF 184
Query: 167 DNSKNAKG---RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ G + + L GL Y V +I A+YRY+ + D
Sbjct: 185 GAYEGGYGIGRHNERTNFAWALHAGLGYAVTQNIRFEAAYRYLNMGEATTGVVTCAPDCP 244
Query: 224 RVDRKGN---AHIASLGINMHF 242
+ + AH +G+ F
Sbjct: 245 KTVYRVKELEAHDVKVGLRYLF 266
>gi|209695194|ref|YP_002263123.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208009146|emb|CAQ79386.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 355
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 64/220 (29%), Gaps = 36/220 (16%)
Query: 26 VDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLL 85
+L + ++ E N+ D+ YVG + + + L
Sbjct: 23 AELPTSTQSNINTEFSNSTLLPDNGDY----WYVGTKLGLSVYQYGCEEWSIDCDRTDLG 78
Query: 86 PNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV---DS 142
G +G+ I + +GI T Y ++ + L Y+ D
Sbjct: 79 G---GFFVGYQI---NESWGIELGKTFLGAAKAEYFSRKVTGDMETIDLFGKYTYGLTDR 132
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+G G SD + D + +G G Y +N
Sbjct: 133 FGFFGKAGLANWNGKTK------SDYVETTTFGHD-----LSVGFGAQYALNKRWLTQLE 181
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+YI S + + + H+ S+GI F
Sbjct: 182 YQYIN------------SIGDDTVGESDYHLMSIGIIYRF 209
>gi|156739606|gb|ABU93463.1| Omp25 [Brucella canis]
Length = 63
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 11/74 (14%)
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K I G + + GY ++ ++ Y G G+ + + N
Sbjct: 1 VKQGIEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGW 49
Query: 184 VLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 50 TAGAGLEAKLTDNI 63
>gi|224582147|ref|YP_002635945.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224466674|gb|ACN44504.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 239
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K I + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGDPVHINVKNQIRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKAASNDFMLGITYAF 239
>gi|218459123|ref|ZP_03499214.1| putative heat resistant agglutinin 1 [Rhizobium etli Kim 5]
Length = 246
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 64/225 (28%), Gaps = 31/225 (13%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKT------YNSLLPNGLGIELGHNIQLE 100
+ +G Y+ + + A ++ L + I G Q+
Sbjct: 2 PEVTVTEATGWYLRGDVGYAFTDLRGARYFQGSNATEVDFDDADLDDAWTIGGGVGYQIN 61
Query: 101 DFV-------FGINCHTTAAKDDSTFYRLK----------EKYFIYGDVVLKAGYSVDSL 143
++ + + + L Y + + + G + +
Sbjct: 62 SYLRTDLTFDYLTQADFRGSTVGQCGFPLVDCTSSDRSSLTAYTLLANAYVDLG-TYGYV 120
Query: 144 LIYGMGGFGGAYVIDSSL------EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
Y G GG+YV +L + + + G + L G V +I
Sbjct: 121 TPYVGAGIGGSYVKWKNLRNVACADDGSFCDDQVTHGGKGNWRFTYALMAGASVDVTCNI 180
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YRY+ ++ A + D+ + H A +G F
Sbjct: 181 KADVGYRYLHIDGGNM-FGYADNGGPGRDKGLSVHEARVGARYLF 224
>gi|227823302|ref|YP_002827274.1| hypothetical protein associated with outer membrane protein,
beta-barrel [Sinorhizobium fredii NGR234]
gi|227342303|gb|ACP26521.1| hypothetical protein associated with outer membrane protein,
beta-barrel [Sinorhizobium fredii NGR234]
Length = 254
Score = 53.7 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 73/264 (27%), Gaps = 50/264 (18%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL--- 66
V + + +LA DLY+ +D + G Y+ H+
Sbjct: 5 LIAVVAAWLGGTPALAADLYVEDPVD-------------PAPVVVGGWYLRGHLGMSNQR 51
Query: 67 --------YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-------FGINCHTT 111
++ L + ++ +++S G+GI Q +++ + +
Sbjct: 52 LGSMEHELFDVVALHEFVDEGSFDSAPLAGVGI----GYQFNEWLRMDGIVEYRGKADFS 107
Query: 112 AAK--DDSTFYRLKEKYFIYGD-----VVLKAGYSVDSLL---IYGMGGFGGAYVIDSSL 161
A D G ++ A + Y G G + S
Sbjct: 108 ALDRYDGDGDGVFDNTNDYDGAKSEWLLMANAYVDIGDWYGVKPYVGAGIGASRNTISGF 167
Query: 162 EKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN----S 216
+ + A D + L G+ Y +++ Y Y+ N
Sbjct: 168 RDINVPMAGVAYADEDPTWNFAWALHAGVAYQATERLAIDFGYSYVDLGDAKTGNIRAYD 227
Query: 217 NAKSDVERVDRKGNAHIASLGINM 240
+ + +H LG+
Sbjct: 228 GSVVNAPMHFEDITSHDFKLGMRY 251
>gi|148368|gb|AAA24807.1| outer membrane protein II [Enterobacter aerogenes]
Length = 238
Score = 53.7 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 21/112 (18%)
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K GY V D L +Y G S+ + G S V G++
Sbjct: 1 LTAKLGYPVTDDLDVYTRLGGMVWRADTSNSIAGDDH----------DTGVSPVFAGGVE 50
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + DI+ Y+++ N D V + + + S+G++ F
Sbjct: 51 WAMTRDIATRLEYQWV----------NNIGDGATVGVRPDNGMLSVGVSYRF 92
>gi|14278420|pdb|1G90|A Chain A, Nmr Solution Structure Of Outer Membrane Protein A
Transmembrane Domain: 10 Conformers
Length = 176
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 30/190 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 7 WYTGAKLG--FSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDFLGRM 61
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K + K GY + D L IY G +D N
Sbjct: 62 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLGGMVFR----------ADTKSNV 110
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G+ G S V G++Y + +I+ Y++ +N D + + +
Sbjct: 111 YGKNHDTGVSPVFAGGVEYAITPEIATRLEYQF----------TNNIGDAHTIGTRPDNG 160
Query: 233 IASLGINMHF 242
+ SLG++ F
Sbjct: 161 MLSLGVSYRF 170
>gi|332142706|ref|YP_004428444.1| putative outer membrane protein A [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552728|gb|AEA99446.1| putative outer membrane protein A [Alteromonas macleodii str. 'Deep
ecotype']
Length = 198
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 26/188 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG YVG + L ++ + L+ + ++V I
Sbjct: 37 SGFYVGGNYGYLRVEGEDDFDDDKDVWQGLVG----------YKFNEWV-AIEGGYVDFG 85
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D E + + + +Y G + +
Sbjct: 86 DYGNDIAGAETDGYTAAIKGILPLT-ERFSLYAKAGQLWSETEYNFAGV----------- 133
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
D S+ +G GL Y V + ++A Y ++ A D++ D + + A
Sbjct: 134 SRDNDDESLFVGAGLSYAVTSNFLVNAEYTVYD---TELDADEAFDDIDDTDFETDLKQA 190
Query: 235 SLGINMHF 242
S+G+ F
Sbjct: 191 SIGVEYRF 198
>gi|54294218|ref|YP_126633.1| hypothetical protein lpl1283 [Legionella pneumophila str. Lens]
gi|53754050|emb|CAH15523.1| hypothetical protein lpl1283 [Legionella pneumophila str. Lens]
Length = 378
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 60/220 (27%), Gaps = 35/220 (15%)
Query: 57 NYVGLHISRLYET----------HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF-- 104
YV I T A ++ Y + + L + +G + + +
Sbjct: 158 WYVAAKIGGQETTPDDQFTVNNDSGFASPFDKDIYTNSSDSSLVLGIGGGYRFTNMILPA 217
Query: 105 ----------------GINCHTTAAKDDSTFYRLKEKYF-IYGDVVLKAGYSVDSLLIYG 147
G + + + Y+ K K + V + +L+ +
Sbjct: 218 ISVGIYYSHFFNMDINGQVIQYSLPEFTNYNYQWKVKSDLVLASVKANI-FRWKNLMPFV 276
Query: 148 MGGFGGAYVIDSSLEKVE----SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
GG G + S + + + LG GLD+ + LS Y
Sbjct: 277 QGGVGASSNRASQYYENALPDVTPRISPNFANHTTTVIAYQLGAGLDWEIKPQWLLSLGY 336
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKG-NAHIASLGINMHF 242
Y E + K ++ +LG F
Sbjct: 337 EYSDLGKVRSGYGTDSWGRETLSSKNLTSNAGTLGFTYLF 376
>gi|326346124|gb|EGD69862.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
1044]
Length = 273
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 23/113 (20%)
Query: 132 VVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ K GY + D L IY GG +D N G+ G S V G+
Sbjct: 27 LTAKLGYPITDDLDIYTRLGGMVWR-----------ADTKSNVYGKNHDTGVSPVFAGGV 75
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y + +I+ Y++ +N D + + + + SLG++ F
Sbjct: 76 EYAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNGMLSLGVSYRF 118
>gi|19881367|gb|AAM00926.1|AF491818_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|19881373|gb|AAM00929.1|AF491821_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|19881385|gb|AAM00935.1|AF491827_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 341
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 54/191 (28%), Gaps = 19/191 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L N + L N G+ G+ I V AK
Sbjct: 28 FYAGAKAGWASFHDGLNQFENSQNAYGTLRNSVTYGVFGGYQITDNFAVELGYDDFGRAK 87
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + LKA Y V L +Y G + +
Sbjct: 88 FRQDGETVIKHTNHGAHLSLKASYPVLEGLDVYARVGAALIRSDYKPT-----KRAAPNE 142
Query: 174 GRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
S V GL+Y + +++L Y+++ D RVD +
Sbjct: 143 THEHSLKVSPVFAGGLEYNLPSLPELALRVEYQWVNKVGR---------DGSRVDYTPSI 193
Query: 232 HIASLGINMHF 242
+ G++ F
Sbjct: 194 GSVTAGLSYRF 204
>gi|156739526|gb|ABU93423.1| Omp25 [Brucella neotomae]
gi|156739608|gb|ABU93464.1| Omp25 [Brucella ovis]
Length = 63
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 24/74 (32%), Gaps = 11/74 (14%)
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K G + + GY ++ ++ Y G G+ + + N
Sbjct: 1 VKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGW 49
Query: 184 VLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 50 TAGAGLEAKLTDNI 63
>gi|260775745|ref|ZP_05884641.1| putative outer membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608161|gb|EEX34330.1| putative outer membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
Length = 195
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 57/194 (29%), Gaps = 28/194 (14%)
Query: 57 NYVGLHISRLYE-------THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
Y+GL + + P+ T + + + G+ + I
Sbjct: 22 GYLGLSAGQARFDNIQGHLSSPIYSTSQSLEISDDDSPAIKLFGGYEF---NQYIAIEGS 78
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDN 168
+ + V K + ++ GGF S SD
Sbjct: 79 IGGYDALD-GQTVSVGDMKFAAVQAKGMLPIGEQFNLFAKGGFAYFGAEFKSNLYTVSDE 137
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ K G+G +Y + ++ + A + Y+ + + +A
Sbjct: 138 TVTGKF-----------GLGAEYALTPNVRVMAEWEYMKPELDLLKAGSA-----TASID 181
Query: 229 GNAHIASLGINMHF 242
++ SLG++ HF
Sbjct: 182 AEINVLSLGVSYHF 195
>gi|167553110|ref|ZP_02346860.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205322381|gb|EDZ10220.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 239
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 104
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K I + GY + + Y G G A+V S+ +
Sbjct: 105 IAFGDPVHINVKNQIRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 163
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 164 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 223
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 224 TKAASNDFMLGITYAF 239
>gi|146993|gb|AAA24237.1| outer membrane protein II [Escherichia vulneris]
Length = 244
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 16/112 (14%)
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K GY + D + IY G S A + G S V G++
Sbjct: 1 LTAKLGYPITDDVDIYTRLGGMVWRADAKSQVGGTG-----ASFKDHDTGVSPVFAGGVE 55
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + DI+ Y+++ N D + + + + + S+G++ F
Sbjct: 56 WAMTRDIATRLEYQWV----------NNIGDAKTLGTRQDNGMLSVGVSYRF 97
>gi|213865487|ref|ZP_03387606.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 233
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 46/151 (30%), Gaps = 24/151 (15%)
Query: 97 IQLEDFVFGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM--GGF 151
Q+ +V G K + K GY + L GG
Sbjct: 4 YQVNPYV-GFEMGYDWLGRMPYKGDNTNGAYKAQGV-QLTAKLGYPITDDLDVYTRLGGM 61
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+S+ A + G S V G++Y + +I+ Y++
Sbjct: 62 VW-------RADTKSNVPGGASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW------ 108
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+N D + + + + S+G++ F
Sbjct: 109 ----TNNIGDANTIGTRPDNGLLSVGVSYRF 135
>gi|114570410|ref|YP_757090.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
gi|114340872|gb|ABI66152.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
Length = 359
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/197 (10%), Positives = 45/197 (22%), Gaps = 18/197 (9%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YV + + LG+ ++ F
Sbjct: 25 GWYVRGAVGYGGPGDTSVSGSLNGDIQGEGNWREAVALGYEW-MDGFRLEGELAHRYNDT 83
Query: 116 DS-TFYRLKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + F ++ A + + Y G G A +
Sbjct: 84 GAVGGFENSLSDFQIWSLMANAIFDFNPDGTYHPYVGLGLGLAETSGTLTGWSAGTMPPV 143
Query: 172 AK------GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ + + + G+ + + ++L YRY + +
Sbjct: 144 PTPADYVVAQDSDNPFAWQVMAGIGWDLTQRLTLDTEYRYFSTGSSDYAPGVSVDGLGG- 202
Query: 226 DRKGNAHIASLGINMHF 242
H +G+ F
Sbjct: 203 ------HELWVGLRYSF 213
>gi|145641242|ref|ZP_01796822.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
gi|145274079|gb|EDK13945.1| Outer membrane protein P5 [Haemophilus influenzae 22.4-21]
Length = 358
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 64/206 (31%), Gaps = 34/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G+ + + + K + LG+ + F +G+ D
Sbjct: 28 FYAGVKAGQGSFHDGINNNGAIKED---------LTLGYGYRRNTFTYGVFGGYQILNQD 78
Query: 117 STFYRLKEKYFIYGDVVLKA-------------------GYSV-DSLLIYGMGGFGGAYV 156
+ + Y +G V +A Y V D L +YG G
Sbjct: 79 NFGLAAELGYDNFGRVKFRAEGKTKAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRS 138
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
E +++ +++ K +S + +G +Y V ++++ Y+++
Sbjct: 139 DYKFYE--DANGTRDHKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYR 193
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + GI+ F
Sbjct: 194 PQDKPNTAINYNPWIGSINAGISYRF 219
>gi|261377935|ref|ZP_05982508.1| surface protein A [Neisseria cinerea ATCC 14685]
gi|269145795|gb|EEZ72213.1| surface protein A [Neisseria cinerea ATCC 14685]
Length = 192
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 57/192 (29%), Gaps = 28/192 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YV + T +D + + P + G++ DF T K
Sbjct: 24 GFYVQGDLGH--STLKTSDEGGKVSSKGFSPR---LSAGYD--FGDFRVA--ADYTHYKT 74
Query: 116 DST-----FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
Y L K + V + A Y D + S + +
Sbjct: 75 RKDHEQGPSYTLDSKIKLQ-SVGVSAIYDFDLNSPVKPYVGARVGLNRFSYDDDDRREGY 133
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+A F + + + G+ Y + +++L A YRY K +
Sbjct: 134 HATETFRKTKTGLGVMTGVGYDITQNVALDAGYRYNHWGNFD-------------GIKVH 180
Query: 231 AHIASLGINMHF 242
H S G+ + F
Sbjct: 181 THEVSAGVRVKF 192
>gi|170717767|ref|YP_001784833.1| OmpA domain-containing protein [Haemophilus somnus 2336]
gi|168825896|gb|ACA31267.1| OmpA domain protein transmembrane region-containing protein
[Haemophilus somnus 2336]
Length = 342
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 69/192 (35%), Gaps = 17/192 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNG--LGIELGHNIQLEDFVFGINCHTTAAK 114
Y G L N + N GI G+ Q+ D V +
Sbjct: 26 FYAGAKAGWASFHDGLNQFENSTEKKGTVRNSVAYGIFGGY--QITDHVAVELGSEYFGQ 83
Query: 115 DDSTFYRLKEKYFIYG-DVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + K+ G + LKA Y V L IYG G +++ E+ +A
Sbjct: 84 AKGRKDKKEAKHTAQGMQLGLKASYPVLEGLDIYGRVGAALIRSNYLNVKNFEN----SA 139
Query: 173 KGRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G + S V G++Y + +++L Y+++ + K+D +R D +
Sbjct: 140 DGVKNTLKVSPVFAAGVEYSLPSLPELALRLEYQWVKGVGKA-----RKNDGKRFDYTPS 194
Query: 231 AHIASLGINMHF 242
+LG++ F
Sbjct: 195 IGAVTLGLSYRF 206
>gi|146985|gb|AAA24233.1| outer membrane protein II [Escherichia vulneris]
Length = 238
Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 21/112 (18%)
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K GY + D L IY G S+ G G S V G++
Sbjct: 1 LTAKLGYPITDDLDIYTRLGGMVWRADSSNSIA----------GDNHDTGVSPVFAGGVE 50
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + DI+ Y+++ N D V + + + S+G++ F
Sbjct: 51 WAMTRDIATRLEYQWV----------NNIGDAGTVGVRPDNGMLSVGVSYRF 92
>gi|212712505|ref|ZP_03320633.1| hypothetical protein PROVALCAL_03600 [Providencia alcalifaciens DSM
30120]
gi|212684721|gb|EEB44249.1| hypothetical protein PROVALCAL_03600 [Providencia alcalifaciens DSM
30120]
Length = 244
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 51/187 (27%), Gaps = 25/187 (13%)
Query: 81 YNSLLPNGLGIELGHNIQL-EDFVF-----------GINCHTTAAKDDSTFYRLKEKYFI 128
+N G +G + F G T + ST
Sbjct: 58 FNDKSHPAFGNFIGIGYDFYDQFSVPIRTELEVGMRGKVSDTHSLNALSTVPNSSADMKN 117
Query: 129 YGDVV---LKAGYSVDS---LLIYGMGGFG-----GAYVIDSSLEKVESDNSKNAKGRFD 177
+ L Y + + + Y G G S E + N
Sbjct: 118 EATLTTLMLNGYYDMKNQTAFMPYISFGLGLASTRYENTQHSEFEIFGLKQNSNQSRSER 177
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA--KSDVERVDRKGNAHIAS 235
+ + LG+G Y + ++S YR+ + ++ N+ K + +H
Sbjct: 178 INKLAWSLGMGGRYAFSDNLSFDLGYRFTEAGKYKISMPNSFDKDATDTSTINLASHDFM 237
Query: 236 LGINMHF 242
G+ F
Sbjct: 238 FGVVYRF 244
>gi|261346857|ref|ZP_05974501.1| adhesin/virulence factor Hek [Providencia rustigianii DSM 4541]
gi|282565037|gb|EFB70572.1| adhesin/virulence factor Hek [Providencia rustigianii DSM 4541]
Length = 241
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 58/222 (26%), Gaps = 38/222 (17%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG----------IELGHNIQLEDFV-F 104
G YV I L+D T + LG I +G++ +
Sbjct: 23 GLYVSGKIGA--SIVQLSDQKWETTDHEFEQENLGKTNDSVFGGNIAVGYDFSKTTTLPI 80
Query: 105 GINCHTTAAKDDSTFYRLKEKYF--------------IYGDVVLKAGYSVDS---LLIYG 147
+ ST + L V++ Y + Y
Sbjct: 81 RTELEFGMREKASTSHNLDSVNDPGVFSSSDDVKADITLNTVMVNTYYDFKNDTKFTPYI 140
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKG-------RFDGHGSSVVLGIGLDYMVNYDISLS 200
G G A + + + + +G+G Y VN +SL
Sbjct: 141 SVGLGMASINHKMRYDYNDHIVSMNQFTHEKFTKSKTTNNFAWSVGLGSQYQVNNHLSLD 200
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYR++ + + K +H G+ F
Sbjct: 201 MSYRFLDAGKSKASYYEDNQENV-SKVKVQSHDIMFGLVYRF 241
>gi|226069484|dbj|BAH36952.1| OmpA-like outer membrane protein [Pasteurella pneumotropica]
Length = 347
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 56/199 (28%), Gaps = 22/199 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN------GLGIELGHNI-QLEDFVFGINC- 108
YVG L ++ + G+ G+ I ++ +
Sbjct: 21 FYVGAKAGWASFHDGLKQFDSKHVGHENGFGVNRNSVTYGVFGGYQILNRDNLGLAVELG 80
Query: 109 --HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVE 165
AK + + + LK Y V L +YG G + + VE
Sbjct: 81 YDDFGRAKFSKGEKVVSKHTNHGAHLSLKGSYEVLEGLDLYGRAGAALVRSDYKNAKGVE 140
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
S V G++Y + +++L Y+++ + E
Sbjct: 141 DSVWGK---DAHSLKVSPVFAAGVEYALPSLPELALRVEYQWL------ASVGKDNKIAE 191
Query: 224 RVDRKGNAHIASLGINMHF 242
D + G++ F
Sbjct: 192 DKDYTPWIGSVTAGLSYRF 210
>gi|152999073|ref|YP_001364754.1| OmpA domain-containing protein [Shewanella baltica OS185]
gi|151363691|gb|ABS06691.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS185]
Length = 192
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 52/188 (27%), Gaps = 31/188 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG + L ++ K + + +G+ + I
Sbjct: 35 GIYVGANYGYL--------KVDGKDDFDDNSDVIQGLVGYRF---NQYLAIEG--GYVNF 81
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
L LK Y + D + +Y GG L
Sbjct: 82 GDYGNSLSNAETDGYTAALKVSYPIVDRVELYAKGGQLWYSTDYDVLGFSG--------- 132
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ V G G+ + V ++A Y + I N SN D + A
Sbjct: 133 --NKDDEGVFAGAGVAFKVTDRFLINAEYTWYDAGITVENVSNG------ADTDTDFKQA 184
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 185 SLGVEYRF 192
>gi|307610035|emb|CBW99569.1| hypothetical protein LPW_13391 [Legionella pneumophila 130b]
Length = 378
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 59/220 (26%), Gaps = 35/220 (15%)
Query: 57 NYVGLHISRLYET----------HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF-- 104
YV I T A ++ Y + + L + +G + + +
Sbjct: 158 WYVAAKIGGQETTPDDQFTVNNDSGFASPFDKDIYTNSSDSSLVLGIGGGYRFTNMILPA 217
Query: 105 ----------------GINCHTTAAKDDSTFYRLKEKYF-IYGDVVLKAGYSVDSLLIYG 147
G + + + Y+ K K + S +++ +
Sbjct: 218 ISVGIYYSHFFNMDINGQVIQYSLPEFTNYNYQWKVKSDLVLASAKANV-ISWKNIMPFV 276
Query: 148 MGGFGGAYVIDSSLEKVE----SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
GG G + S + + + LG GLD+ + LS Y
Sbjct: 277 QGGVGVSSNKGSQYYENALPDVTPRISPNFANHTTTVIAYQLGAGLDWEIKPQWLLSLGY 336
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKG-NAHIASLGINMHF 242
Y E + K ++ +LG F
Sbjct: 337 EYSDLGKVRSGYGTDSWSRETLSSKNLTSNAGTLGFTYLF 376
>gi|304411584|ref|ZP_07393197.1| OmpA domain-containing protein [Shewanella baltica OS183]
gi|307306640|ref|ZP_07586382.1| OmpA domain-containing protein [Shewanella baltica BA175]
gi|304350111|gb|EFM14516.1| OmpA domain-containing protein [Shewanella baltica OS183]
gi|306910608|gb|EFN41037.1| OmpA domain-containing protein [Shewanella baltica BA175]
Length = 192
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 52/188 (27%), Gaps = 31/188 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG + L ++ K + + +G+ + I
Sbjct: 35 GIYVGANYGYL--------KVDGKDDFDDNSDVIQGLVGYRF---NQYLAIEG--GYVNF 81
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
L LK Y + D + +Y GG L
Sbjct: 82 GDYGNSLSNAETDGYTAALKVSYPIVDRVELYAKGGQLWYSTDYDVLGFSG--------- 132
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ V G G+ + V ++A Y + I N SN D + A
Sbjct: 133 --NKDDEGVFAGAGVAFKVTDRFLINAEYTWYDAGITIENVSNG------ADTDTDFKQA 184
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 185 SLGVEYRF 192
>gi|304414298|ref|ZP_07395666.1| outer membrane protein A [Candidatus Regiella insecticola LSR1]
gi|304283512|gb|EFL91908.1| outer membrane protein A [Candidatus Regiella insecticola LSR1]
Length = 389
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 52/192 (27%), Gaps = 24/192 (12%)
Query: 57 NYVGLHISR-LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G + Y + T S + LG Q+ + G+
Sbjct: 68 WYAGAKVGWSGYHDTLMNHTYKGVGDGSTRKDQLGAGAFLGYQINQY-LGLEMGYDW--F 124
Query: 116 DSTFYRLKEKYFIYGD----VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSK 170
Y K + + K Y V L +Y G +
Sbjct: 125 GRMHYSGDVKNGAFKAHGVQLAAKLSYPVLEDLDVYTRLGGMLWRADSTGNLGDPRKKI- 183
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
R G S V +GL+Y + + Y+++ N D + + +
Sbjct: 184 ----RDYDIGVSPVAAVGLEYALTQNWVTRLDYQFV----------NNMGDEATLGTRPD 229
Query: 231 AHIASLGINMHF 242
SLG+ F
Sbjct: 230 NTNLSLGVAYRF 241
>gi|114320656|ref|YP_742339.1| putative outer-membrane protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114227050|gb|ABI56849.1| putative outer-membrane protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 218
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 55/189 (29%), Gaps = 17/189 (8%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G I + + + G+ LG + + FG +
Sbjct: 45 GVYLGGQIGWAGYDTDIETDGDSIKGLAASGVSSGVLLGTGTVNDGWYFGFQGNFLLNNA 104
Query: 116 DST-FYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D++ + + G + D +L+YG+ G+ S + D +
Sbjct: 105 DASLGTDADLDVEESYGIDARLGRVISDRVLLYGLAGWQRTNAELSVAGVDKDDKDFDGF 164
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G G++ ++ Y + + D + V+ +A
Sbjct: 165 R----------FGAGVEMATQDNVFFRIEYTQTVYGSEDF-----RIDGDEVEADPHAQD 209
Query: 234 ASLGINMHF 242
L I F
Sbjct: 210 FHLVIGYRF 218
>gi|129134|sp|P24016|OMPA_CITFR RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|144442|gb|AAA23095.1| outer membrane protein II [Citrobacter freundii]
Length = 238
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 23/113 (20%)
Query: 132 VVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ K GY + D L IY GG +D N + G S V G+
Sbjct: 1 LTAKLGYPITDDLDIYTRLGGMVWR-----------ADAKNNEGFKDHDTGVSPVFAGGV 49
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y + +I+ Y++ +N D V + + + S+G++ F
Sbjct: 50 EYAITPEIATRLEYQW----------TNNIGDANTVGGRPDNGLLSVGVSYRF 92
>gi|91224878|ref|ZP_01260138.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|91190424|gb|EAS76693.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
Length = 330
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/188 (13%), Positives = 51/188 (27%), Gaps = 36/188 (19%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + L D + G G+ +G++ + G+
Sbjct: 27 YIGGKVG----MTTLDDACYLNSPCDDEAFGAGLHIGYDFTD---IIGLEYGVDFLG--- 76
Query: 118 TFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
G+ A ++D L + ++ S
Sbjct: 77 ---------DYEGNSRSGANTINTIDGNLTALTLAPKFNWHLNDSWNLFAKIGGAYMMSD 127
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
D +G +Y ++ + S+ A Y RY + +A+
Sbjct: 128 -DETDFVPTGSLGAEYSIDRNWSVRAEYQRYQDMSDDVWD-------------DMDANFF 173
Query: 235 SLGINMHF 242
+G+N F
Sbjct: 174 GIGVNYKF 181
>gi|239995605|ref|ZP_04716129.1| putative outer membrane protein A [Alteromonas macleodii ATCC
27126]
Length = 198
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/188 (12%), Positives = 56/188 (29%), Gaps = 26/188 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG YVG + L ++ + L+ + +++ +
Sbjct: 37 SGFYVGGNYGYLRVEGEDDFDDDKDVWQGLVG----------YKFNEWIAIEGGYIDFGD 86
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ + + + + +Y G + +
Sbjct: 87 YGNDLAGAETD-GYTAAIKGILPLT-ERFSLYAKAGQLWSETEYNFAGV----------- 133
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
D S+ +G GL Y + + ++A Y ++ A D++ D + + A
Sbjct: 134 SRDNDDESLFVGAGLSYAITSNFLVNAEYTVYD---TELDADEAFDDIDDTDFETDLKQA 190
Query: 235 SLGINMHF 242
S+G+ F
Sbjct: 191 SIGVEYRF 198
>gi|269102083|ref|ZP_06154780.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161981|gb|EEZ40477.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 317
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 21/152 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G I + DT ++ G LG+ Q+ + F + T
Sbjct: 21 FYAGARIGNA-----IYDTDHKGPNVDDANLAGGAFLGY--QIAPW-FAVEAGYTHLGST 72
Query: 117 STFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + D+V K Y++ D + ++G G V +L +
Sbjct: 73 TIKGTDAKFRTQGADIVGKYSYAINDKIDVFGKLGAYYYDVHTKNLADAKEH-------- 124
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G + G+G +Y + ++S + Y+Y
Sbjct: 125 ----GWAGTAGVGAEYYLTNNLSTAVEYQYYN 152
>gi|218766516|pdb|2K0L|A Chain A, Nmr Structure Of The Transmembrane Domain Of The Outer
Membrane Protein A From Klebsiella Pneumoniae In Dhpc
Micelles
Length = 216
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 53/193 (27%), Gaps = 26/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + N N G G G+ Q+ + G
Sbjct: 19 WYAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGY--QVNPY-LGFEMGYDWL 75
Query: 114 K---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + K GY + D L IY G
Sbjct: 76 GRMAYKGSVDNGAFKAQGV-QLTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTG--- 131
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S V G+++ V DI+ Y+++ N D V +
Sbjct: 132 --VSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWV----------NNIGDAGTVGTRP 179
Query: 230 NAHIASLGINMHF 242
+ + SLG++ F
Sbjct: 180 DNGMLSLGVSYRF 192
>gi|94266061|ref|ZP_01289780.1| Twin-arginine translocation pathway signal [delta proteobacterium
MLMS-1]
gi|93453383|gb|EAT03811.1| Twin-arginine translocation pathway signal [delta proteobacterium
MLMS-1]
Length = 234
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 33/207 (15%)
Query: 56 GNYVGLHISRL----YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G YV +I + Y+ LG+ LG+ +L
Sbjct: 41 GYYVSGNIGVAMPRDSTATYPDTPGLSQKYDFDSGLALGLALGY--KLGPARVEGEIAYQ 98
Query: 112 AAKDDS------------TFYRLKEKYFIYGDVVLKAGY-SVDS---LLIYGMGGFGGAY 155
+ D + ++ L GY + Y G G A
Sbjct: 99 KSDIDDITVSQAGTSTSLSAAGVQFSGDAKATSFLLNGYYDFHNNSAFTPYLTAGLGLAK 158
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
V S + + +G+G +Y +N +SL A YRY+ S +
Sbjct: 159 VKVSQTVVGQP-------WSDSDTVFAYQVGVGTEYALNQTVSLDARYRYLATADPSFSA 211
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
+ +D + +H G+ + F
Sbjct: 212 DDG----SPIDAEFASHNLLFGVRVSF 234
>gi|187762392|gb|ACD35195.1| outer membrane protein A [endosymbiont of Crataerina melbae]
Length = 231
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 56/195 (28%), Gaps = 27/195 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTT 111
Y G + P G G +G+ Q + G
Sbjct: 28 WYTGGKLGWSQYHDTGFYGNGFDNRIGNGPTRDDQLGAGAFVGY--QANQY-LGFELGYD 84
Query: 112 AAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ K + K Y + D L IY G ++ + K D
Sbjct: 85 WLGRMAYKGSVNNGSFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWRADSKGAYD 139
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
N + G S + +GL+Y + + Y+++ N D V
Sbjct: 140 NGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNIGDAGTVGT 189
Query: 228 KGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 190 RPDNSMLSVGVSYRF 204
>gi|168232259|ref|ZP_02657317.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194470699|ref|ZP_03076683.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194457063|gb|EDX45902.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205333400|gb|EDZ20164.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 239
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 22/197 (11%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK 125
+ + + + G G+ +G++ + F + T + +
Sbjct: 45 TFSQDEIVNGHATLPDRTKGVFGGGVAIGYDF-YDPFQLPVRLELGTTFRGETDAKGGQD 103
Query: 126 YFIYG--------------DVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESDN 168
+G ++ Y + Y G G A+V S+ +
Sbjct: 104 IIAFGQPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGF 162
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERV 225
N + + GIG Y V +I + ASY+YI S++ + +
Sbjct: 163 GINETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDA 222
Query: 226 DRKGNAHIASLGINMHF 242
D K ++ LGI F
Sbjct: 223 DTKAASNDFMLGITYAF 239
>gi|114707343|ref|ZP_01440240.1| heat resistant agglutinin 1 precursor [Fulvimarina pelagi HTCC2506]
gi|114537224|gb|EAU40351.1| heat resistant agglutinin 1 precursor [Fulvimarina pelagi HTCC2506]
Length = 301
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/230 (11%), Positives = 55/230 (23%), Gaps = 43/230 (18%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLP------------NGLGIELGHNIQLEDF 102
+G Y+ + ++ Y L + G + DF
Sbjct: 49 AGWYLRGDVGYVFSDKTRGRYKVPYHYGYDLEYETYSYDEIELEESFLVSGGVGYRFNDF 108
Query: 103 -VFGINCHTTAAKDDSTFYRLKEKYFI--------------YGDVVLKAGYSVDSLLIYG 147
++ T + + G + + Y
Sbjct: 109 ARLDFTADYFSSDLRGTSNCVGTPSSDCRYDDRAETDIWVLMANAYADLG-TYGGITPYV 167
Query: 148 MGGFGGAYVIDSSL---------EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
GG G A+V + G D + L +G Y + ++
Sbjct: 168 GGGLGFAHVSYGEMKNEFKCGSHYSSSFCGITLKHGGKDSWRFAYGLTVGASYDLTANLK 227
Query: 199 LSASYRYIP------HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A Y++ ++ + S + D + H G+ F
Sbjct: 228 FDAGYKWTHINDGEAFGYDELDRAAGASGTQGYDNGFDIHTVRAGLRYEF 277
>gi|238918213|ref|YP_002931727.1| hypothetical protein NT01EI_0249 [Edwardsiella ictaluri 93-146]
gi|238867781|gb|ACR67492.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 210
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 63/199 (31%), Gaps = 27/199 (13%)
Query: 55 SGNYVGLHISRLYETH-PLADTINRKTYNSLLPNG-LGIELGHNIQLE-DFVFGINCHTT 111
+G Y G + E D N G G+ G+N + + T
Sbjct: 28 TGYYAGAKMGISAEHLFDQKDVNGNGMSNDNKGVGNAGLVFGYNFENQFSLPVRAELDYT 87
Query: 112 A---AKDDSTFYRLKEKYFIYGDVVLKA-GY----SVDSLLIYGMGGFGGAYVIDSSLEK 163
A T + G L GY + Y G G A V +
Sbjct: 88 FRAHATSSHTNDAAETNNSRLGLQTLMVNGYYDIKTGTPFTPYIGAGIGYANVSLKNDMN 147
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
++ + + + + +G G+ Y VN + L Y+Y+ + NS A
Sbjct: 148 GDNV-------QSNSNNFAWSVGTGVIYNVNERLDLDLGYKYLDAGKANAGNSQA----- 195
Query: 224 RVDRKGNAHIASLGINMHF 242
K H +LG+N +F
Sbjct: 196 ----KVATHDFTLGVNYYF 210
>gi|307610344|emb|CBW99912.1| hypothetical protein LPW_16701 [Legionella pneumophila 130b]
Length = 254
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 65/202 (32%), Gaps = 24/202 (11%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGI----ELGHN-IQLEDFVFGINCHTTAAKDDSTF 119
++ + + +N ++ +G G+ LG+ + G+ + ++
Sbjct: 52 YNFKRNETSQELNFTDFDHFDWHGSGLGGEIYLGYEKFFRTHYYIGLEGFFNRSSNEGKI 111
Query: 120 Y------------RLKEKYFIYGDVVLKAG-YSVDSLLIYGMGGFGGAYVIDSSLEK-VE 165
Y + K + ++ G Y +IYG G+ + V S
Sbjct: 112 YFFDSNELYSRILKGSFKQKWQSGLAIRPGIYLPSVGIIYGRVGWIVSDVNLSGSITQSG 171
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-----HHIHSVNNSNAKS 220
S + + + V LG GL+ + + + + +++N +
Sbjct: 172 PFGSFSGRFSNTKKKNGVQLGTGLELELTKNWRCRVEWDWNRLQDFIFDSQGRDSNNHRY 231
Query: 221 DVERVDRKGNAHIASLGINMHF 242
R+ + LG+N F
Sbjct: 232 QTTRIAKHPILEQFKLGLNWRF 253
>gi|261377936|ref|ZP_05982509.1| surface protein A [Neisseria cinerea ATCC 14685]
gi|269145796|gb|EEZ72214.1| surface protein A [Neisseria cinerea ATCC 14685]
Length = 194
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 64/195 (32%), Gaps = 32/195 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+ + + D + + G++ DF T K
Sbjct: 24 GFYIQGDVGHTSVKGKIYD-----ESETAKGFSPRLSAGYD--FGDFRVA--ADYTHYKS 74
Query: 116 DSTFYRLKEKYFI-----YGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESD 167
R+ + + V + A Y D + Y G +V + E S
Sbjct: 75 HKESGRISDSTTYDAKAKFQSVGVSAIYDFDLNSPVKPYVGARVGLNHVSFDTKEYGSSG 134
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ ++ + R G V+ GIG Y +N +I+L A YRY D
Sbjct: 135 SIEHYETRKTKTGLGVMTGIG--YDINQNIALDAGYRYNYWGKFD-------------DV 179
Query: 228 KGNAHIASLGINMHF 242
K ++H S G+ + F
Sbjct: 180 KVHSHEVSAGVRVKF 194
>gi|253700170|ref|YP_003021359.1| surface antigen msp4 family protein [Geobacter sp. M21]
gi|251775020|gb|ACT17601.1| surface antigen msp4 family protein [Geobacter sp. M21]
Length = 213
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 54/198 (27%), Gaps = 24/198 (12%)
Query: 56 GNYVGLHISR---LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
G Y+ + D GL I +
Sbjct: 29 GPYISGFVGVTIPADTDATSFDGSGPIQDRIEFDPGLNIGGTAGMDFGAARIEGEISYKG 88
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYS--------VDSLLIYGMGGFGGAYVIDSSLEKV 164
A DS I G V A + + Y GG G A +
Sbjct: 89 ADIDSITDFNGPHTGIKGGVEALAFMANLFVDLHTQGPITPYFGGGIGFASLHIDDTYDF 148
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
E+D D + G GL+ +N +SL YRY + N
Sbjct: 149 ENDF----YIDDDDTVFAYQAGGGLEVALNRQMSLDLGYRYFRTSEATFAN--------- 195
Query: 225 VDRKGNAHIASLGINMHF 242
+ + +H A++G+ + +
Sbjct: 196 TEFEFESHNATVGLRLKY 213
>gi|146997|gb|AAA24239.1| outer membrane protein II [Escherichia blattae]
Length = 241
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ +N G S V G++Y I+ Y++I
Sbjct: 16 YTRLGGMVWRADAKNNVGGGDRSNHDTGVSPVFAGGVEYAWTPSIATRLEYQWI------ 69
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + S+G++ F
Sbjct: 70 ----NNIGDAGTVGTRPDNGMLSVGVSYRF 95
>gi|12382099|gb|AAG53022.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAAGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + +G++ F
Sbjct: 64 AGTVGARPDNSMLRVGVSYRF 84
>gi|239950059|gb|ACS36761.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 268
Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 16/161 (9%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-I 145
G+ G+ I +++ + K+ +G + LK Y V + L +
Sbjct: 15 TYGVFGGYQI-IDNLTVELGYDYFGRVRGKEQEFRAFKHSAHGTHLSLKPSYEVLNGLDV 73
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
YG G + + + +S++LG G++Y + ++ Y++
Sbjct: 74 YGKVGAALVRNDYKFYDTED---------KAHNLKTSLLLGAGVEYAILPKLAFRVEYQW 124
Query: 206 I----PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + +AH S GI+ F
Sbjct: 125 LSRVGNANKAAQKRGDTAMFGPGSTYSPDAHSVSAGISYRF 165
>gi|147003|gb|AAA24242.1| outer membrane protein II [Escherichia blattae]
Length = 240
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ +N G S V G++Y + I+ Y++I
Sbjct: 16 YTRLGGMVWRADAKNNVVGGDRSNHDTGVSPVFAGGVEYAMTPSIATRLEYQWI------ 69
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + S+G++ F
Sbjct: 70 ----NNIGDAGTVGTRPDNGMLSVGVSYRF 95
>gi|327479356|gb|AEA82666.1| outer membrane protein OprG [Pseudomonas stutzeri DSM 4166]
Length = 228
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G + D+ L + D + +G+DYM+ +I L+A R
Sbjct: 135 PYVGAGINYTWFFDTELSSSAEGKGFSGLDVKDSW--GLAAQVGMDYMLTDNIMLNAQVR 192
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YI +N +VD + + +G+ F
Sbjct: 193 YIDIDTTG--TTNFGGAKVKVDLDVDPFVYMVGLGYKF 228
>gi|156739586|gb|ABU93453.1| Omp25 [Brucella melitensis]
Length = 64
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 24/74 (32%), Gaps = 11/74 (14%)
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K G + + GY ++ ++ Y G G+ + + N
Sbjct: 1 VKQGFEGSLRARVGYDLNPVMPYLTAGIVGSQIKLN-----------NGLDDESKFRVGW 49
Query: 184 VLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 50 TAGAGLEAKLTDNI 63
>gi|289809872|ref|ZP_06540501.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 222
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 20/196 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYR--- 121
+ + + + G G+ +G++ + TT +
Sbjct: 28 TFSQEEIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDI 87
Query: 122 --------LKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ K + + GY + + Y G G A+V S+ +
Sbjct: 88 IAFGQPVHINVKNQVRMTTYIVNGYYDFHNSTAFTPYISAGVGLAHVKLSN-NTIPVGFG 146
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVD 226
N + + GIG Y V +I + ASY+YI S++ + + D
Sbjct: 147 INETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAGKVSISKNHYAGDEHTAYDAD 206
Query: 227 RKGNAHIASLGINMHF 242
K ++ LGI F
Sbjct: 207 TKAASNDFMLGITYAF 222
>gi|320577074|gb|ADW54046.1| outer membrane protein A [Sodalis glossinidius]
Length = 238
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 22/159 (13%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSL 143
G G LG+ Q + G + K + K Y + D L
Sbjct: 22 GAGAFLGY--QANPY-LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDL 77
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
IY G ++ + K DN + G S + +GL+Y + + Y
Sbjct: 78 DIYTRLG----GMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDY 133
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ N D V + + + S+G++ F
Sbjct: 134 QWV----------NNIGDAGTVGTRPDNSMLSVGVSYRF 162
>gi|323138986|ref|ZP_08074046.1| porin [Methylocystis sp. ATCC 49242]
gi|322395740|gb|EFX98281.1| porin [Methylocystis sp. ATCC 49242]
Length = 289
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 54/227 (23%), Gaps = 45/227 (19%)
Query: 56 GNYVGLHISRL--------YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
G Y+ + P + + G Q +
Sbjct: 44 GWYLRGDVGVGVNQLTNLRSTFDPTVVVPMPLFNQYSIGDAAFAGAGVGYQFNSW---FR 100
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKA------------------------GY----S 139
T + YR + Y + GY +
Sbjct: 101 ADVTGEYRTAANYRATQSYTDIWSAPGFSPCGIGARCHDTYNGQHSAAVFLANGYFDLGT 160
Query: 140 VDSLLIYGMGGFGGA--YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
+ Y GG G A ++ + + + + + + GL Y V ++
Sbjct: 161 WYGITPYVGGGIGFAVNWLQNVNDFSAQPAGGFGYASDTNRTNFAWAVMAGLAYNVTPNL 220
Query: 198 SLSASYRYIPHHIHSVN----NSNAKSDVERVDRKGNAHIASLGINM 240
L YRY+ + N A ER +H LG
Sbjct: 221 KLEVGYRYLDMGTINTNPIYCQGVAVCPRERQSFDLASHDIRLGFRY 267
>gi|306844682|ref|ZP_07477267.1| outer surface protein [Brucella sp. BO1]
gi|306274854|gb|EFM56624.1| outer surface protein [Brucella sp. BO1]
Length = 274
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 62/216 (28%), Gaps = 33/216 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+ I + A+ ++ G + + F+ G
Sbjct: 45 GWYLRGDIGYSWNGFKRAEYAAIGDCDTCNGLSRGGDTLYGDLNGSFLIGGGGGYQVTDY 104
Query: 116 DSTFYRLK--EKYFIYGDVVL-------------KAGYS--------------VDSLLIY 146
T L + G V ++ YS + + Y
Sbjct: 105 FRTDLTLDYMTRSRFSGHVSGPDCNGDTGCASDERSHYSALSILANAYVDLGNLGGVTPY 164
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G GG V S L + S S+ + L G + +++ L A YRY
Sbjct: 165 VGAGIGGTRVNWSDLVDITSGFSQEGAAN---WRFTYALMAGASVDLTHNLKLDAGYRYR 221
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + N +D D+ N H +G+ F
Sbjct: 222 HVNGGKMFEGNQWTDA-GYDKGLNIHDIRVGLRYMF 256
>gi|309751191|gb|ADO81175.1| Outer membrane protein P5 [Haemophilus influenzae R2866]
Length = 358
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 64/206 (31%), Gaps = 34/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G+ + + + K + LG+ + F +G+ D
Sbjct: 28 FYAGVKAGQGSFHDGINNNGAIKED---------LSLGYGYRRNTFTYGVFGGYQILNQD 78
Query: 117 STFYRLKEKYFIYGDVVLKA-------------------GYSV-DSLLIYGMGGFGGAYV 156
+ + Y +G V +A Y V D L +YG G
Sbjct: 79 NFGLAAELGYDNFGRVKFRAEGKTKAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRS 138
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
E +++ +++ K +S + +G +Y V ++++ Y+++
Sbjct: 139 DYKFYE--DANGTRDHKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYR 193
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + GI+ F
Sbjct: 194 PQAKPNTAINYNPWIGSINAGISYRF 219
>gi|254511012|ref|ZP_05123079.1| putative outer membrane protein [Rhodobacteraceae bacterium KLH11]
gi|221534723|gb|EEE37711.1| putative outer membrane protein [Rhodobacteraceae bacterium KLH11]
Length = 238
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 55/156 (35%), Gaps = 16/156 (10%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS--VDSLLIY 146
G+E+G++ FG +T + + + + LK G + ++L +
Sbjct: 97 YGVEIGYD-------FGTLDDSTTTQIGTAVASGRSAISDVFSLRLKNGLTNRRGNILYF 149
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G+ + S+ + + + + +G ++ +N + S++ Y+
Sbjct: 150 ATVGYVRGDITTSASLT---ELTGTMRFEEVDRREGFSVSLGAEHQLNENWSITGEIEYL 206
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V+ S +G +G+N F
Sbjct: 207 QFESETVDLGPMFSTKSTPSYRG----FRIGLNYTF 238
>gi|193213613|ref|YP_001999566.1| porin opacity type [Chlorobaculum parvum NCIB 8327]
gi|193087090|gb|ACF12366.1| porin opacity type [Chlorobaculum parvum NCIB 8327]
Length = 230
Score = 52.1 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 66/236 (27%), Gaps = 38/236 (16%)
Query: 13 VFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWS---GNYVGLHISRLYET 69
VFL V +LA P + + + G Y+ I
Sbjct: 27 VFLLAGVSGTALANGTSAPEPEPMRYMPPPPPPAPAPAPVVDTCEPGAYISGSIGIG--- 83
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY 129
P + Y L +G++ + K D Y
Sbjct: 84 IPEKSNFDGYKYEMETGLALNGAIGYDFGDTR----LEAAVGYQKHDFKNYDDDLS---L 136
Query: 130 GDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
V+ A Y +D + Y M G G A+V + + +G
Sbjct: 137 LTVMANAYYDIDTGSDITPYLMAGAGWAHVD--------------SSWDESDDVFAWQVG 182
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL + V +L YRY+ + + E + K H LG+ +F
Sbjct: 183 AGLGFKVADCTTLDLGYRYLRPNKFDL--------GEGDNTKWAVHNIMLGLRYNF 230
>gi|121604226|ref|YP_981555.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
CJ2]
gi|120593195|gb|ABM36634.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
Length = 376
Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 59/202 (29%), Gaps = 30/202 (14%)
Query: 55 SGNYVGLHISRLYETHP---------LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
SG Y G + R T + + + G I G+ I V G
Sbjct: 30 SGWYGGANAGRSAATIDDARINSGLIGSGFSSSTIVDDDRSTGYKIFGGYQINNNFAVEG 89
Query: 106 I---NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV--DSLLIYGMGGFGGAYVIDSS 160
+ L + + G + G + ++G G A DS
Sbjct: 90 GYFDLGNFGYTATTVPAGTLDGRIKLRGLNLDLVGTLPLSEKFSVFGRAGLNYAQARDSF 149
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ A + ++ LG+GL Y + +++ A ++A
Sbjct: 150 SGT---GAVQVANPNPRKNDTNYKLGLGLQYALTESLAVRAE-------AERYRVNDAIG 199
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+ VD S+G+ F
Sbjct: 200 NRGHVDL------VSVGLIYRF 215
>gi|160873670|ref|YP_001552986.1| OmpA domain-containing protein [Shewanella baltica OS195]
gi|160859192|gb|ABX47726.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS195]
gi|315265901|gb|ADT92754.1| OmpA domain-containing protein [Shewanella baltica OS678]
Length = 192
Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 52/188 (27%), Gaps = 31/188 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG + L ++ K + + +G+ + I
Sbjct: 35 GIYVGANYGYL--------KVDGKDDFDDNSDVIQGLVGYRF---NQYLAIEG--GYVNF 81
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
L LK Y + D + +Y GG L
Sbjct: 82 GDYGNSLSNAETDGYTAALKVSYPIVDRVELYAKGGQLWYSTDYDVLGFSG--------- 132
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ V G G+ + V ++A Y + I N S+ D + A
Sbjct: 133 --NKDDEGVFAGAGVAFKVTDRFLINAEYTWYDAGITVENVSSG------ADTDTDFKQA 184
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 185 SLGVEYRF 192
>gi|3282021|emb|CAA07454.1| outer membrane protein [Haemophilus sp.]
Length = 360
Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/209 (14%), Positives = 67/209 (32%), Gaps = 38/209 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGI-ELGHNIQLEDFVFGINCHTTAAKD 115
Y G+ + + + NS + + LG+ G+N F +G+
Sbjct: 28 FYAGVKAGQASFH-------DGISKNSFIADILGLDNYGYN--RNSFTYGVFGGYQILNR 78
Query: 116 DSTFYRLKEKYFIYGDVVLK---------------------AGYSVDSLL-IYGMGGFGG 153
D+ ++ Y +G V K Y V + L +YG G
Sbjct: 79 DNLGLAVELGYDDFGRVKFKEPSPGKTSIKHTNHGAHLSFKGSYEVLNGLDVYGKAGVAL 138
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + N++ +S + +G +Y V ++++ Y+++
Sbjct: 139 VRSDYKFYDANGARKRANSRHSL---RTSGLFAVGAEYAVLPELAVRLEYQWL---TRVG 192
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ VD + G++ F
Sbjct: 193 KLRTQETHNSSVDYNPWIGSINAGVSYRF 221
>gi|54297239|ref|YP_123608.1| hypothetical protein lpp1284 [Legionella pneumophila str. Paris]
gi|53751024|emb|CAH12435.1| hypothetical protein lpp1284 [Legionella pneumophila str. Paris]
Length = 378
Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 53/192 (27%), Gaps = 25/192 (13%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+G+ + L Y+ N+ + V + + T
Sbjct: 202 LGIGGGYRFTNIILPAISVGVYYSHF----------FNMDINGQV------IQYSLPEFT 245
Query: 119 FYRLKEKYF---IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE----SDNSKN 171
Y + K + V A + +L+ + GG G + S + +
Sbjct: 246 NYNYQWKVKSDLVLASVKANA-FRWKNLMPFVQGGVGASSNRASQYYENALPDVTPRISP 304
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG-N 230
+ LG GLD+ + LS Y Y + E + K
Sbjct: 305 NFANHTATVFAYQLGAGLDWEIRPQWLLSLGYEYSDLGKVRSGYGTDSWNRETLSSKNLT 364
Query: 231 AHIASLGINMHF 242
++ + G F
Sbjct: 365 SNAGTFGFTYLF 376
>gi|14578716|gb|AAK68965.1| major outer membrane protein [Pectobacterium carotovorum]
Length = 145
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D N G+ G S V G++Y + +I+ Y++ +N D +
Sbjct: 14 ADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTI 63
Query: 226 DRKGNAHIASLGINMHF 242
+ + + SLG++ F
Sbjct: 64 GTRPDNSMLSLGVSYRF 80
>gi|309973370|gb|ADO96571.1| Outer membrane protein P5 [Haemophilus influenzae R2846]
Length = 359
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 63/199 (31%), Gaps = 19/199 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGL-------GIELGHNIQLEDFVFGINCH 109
Y G+ + + + K + G G+ G+ I L FG+
Sbjct: 28 FYAGVKAGQGSFHDGINNNGAIKEDLTFASYGYRRNTFTYGVFGGYQI-LNQDNFGLAAE 86
Query: 110 TTAAKDDSTFYRLKEK-----YFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEK 163
RL K + LK Y V D L +YG G E
Sbjct: 87 LGYDNFGRAKLRLAGKPKAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRSDYKFYE- 145
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+++ +++ K +S + +G +Y V ++++ Y+++
Sbjct: 146 -DANGTRDHKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYRPQDKPNT 201
Query: 224 RVDRKGNAHIASLGINMHF 242
++ + GI+ F
Sbjct: 202 AINYNPWIGSINAGISYRF 220
>gi|52841560|ref|YP_095359.1| hypothetical protein lpg1329 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628671|gb|AAU27412.1| hypothetical protein lpg1329 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 389
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 52/192 (27%), Gaps = 25/192 (13%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+G+ + L Y+ N+ + V + + T
Sbjct: 213 LGIGGGYRFTNIILPAISVGVYYSHF----------FNMDINGQV------IQYSLPEFT 256
Query: 119 FYRLKEKYF---IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE----SDNSKN 171
Y + K + S +L+ + GG G + S + +
Sbjct: 257 NYNYQWKVKSDLVLASAKANV-ISWKNLMPFVQGGVGVSSNRASQYYESALPDVTPRISP 315
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG-N 230
+ LG GLD+ + LS Y Y + E + K
Sbjct: 316 NFANHTTTVFAYQLGAGLDWEIRPQWLLSLGYEYSDLGKVRSGYGTDSWNRETLSSKNLT 375
Query: 231 AHIASLGINMHF 242
++ +LG F
Sbjct: 376 SNAGTLGFTYLF 387
>gi|294634347|ref|ZP_06712885.1| SapA [Edwardsiella tarda ATCC 23685]
gi|291092244|gb|EFE24805.1| SapA [Edwardsiella tarda ATCC 23685]
Length = 210
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 60/200 (30%), Gaps = 29/200 (14%)
Query: 55 SGNYVGLHISRLYETH-PLADTINRKTYNSLLPNG-LGIELGHNIQLEDFVFGINCHTTA 112
+G Y G + E D N G G+ G+N F +
Sbjct: 28 TGYYAGAKMGISAEHLFNQDDVDGHGMSNDNKGVGNAGLVFGYNF-ANQFNLPVRAELDY 86
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKA------GY----SVDSLLIYGMGGFGGAYVIDSSLE 162
+ D L GY + Y G G A V +
Sbjct: 87 TFRAHATSSHTNDQGMTNDSRLGLQTLMVNGYYDIKTGTDFTPYIGAGIGYANVSLKNDL 146
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
++ + + + + +G G+ Y VN + L Y+Y+ + NS A
Sbjct: 147 DGDNV-------QSNSNNFAWSVGTGVIYNVNPRLDLDLGYKYLDAGKATAGNSQA---- 195
Query: 223 ERVDRKGNAHIASLGINMHF 242
K H +LG+N +F
Sbjct: 196 -----KVATHDFTLGVNYYF 210
>gi|222055397|ref|YP_002537759.1| surface antigen msp4 family protein [Geobacter sp. FRC-32]
gi|221564686|gb|ACM20658.1| surface antigen msp4 family protein [Geobacter sp. FRC-32]
Length = 231
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 60/213 (28%), Gaps = 35/213 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSL----------LPNGLGIELGHNIQLEDFVFG 105
G YV I ++ + S+ +G G++
Sbjct: 28 GAYVSGFIGVSVPRDASVNSSQFASDGSMLNATDEVEFDPGINIGGTGGYDFGF----LR 83
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG------------YSVDSLLIYGMGGFGG 153
+ + + F +G+ G ++ + Y GG G
Sbjct: 84 LEGELSFKYSEINRITDTADGFRFGNPDGNIGVFAMMGNAFFDLHNPGPVTPYVGGGVGF 143
Query: 154 AYVIDSSLEKVESDNSKNA----KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
A + S + S D + G G+ +N ++L YRY
Sbjct: 144 ATLHLSDTFGTDVTTSGPERIFLYPEDDDMVFAYQAGAGVGIALNRRLTLDIGYRYFGTS 203
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + D + +H A++G+ + F
Sbjct: 204 RARFGDG-----FDTADLRYESHNAAVGLRVKF 231
>gi|52842626|ref|YP_096425.1| hypothetical protein lpg2417 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629737|gb|AAU28478.1| hypothetical protein lpg2417 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 281
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 43/147 (29%), Gaps = 28/147 (19%)
Query: 95 HNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
++ + F I + V GY G
Sbjct: 160 YDYTSNNVNFLIEGDLYFNPISTWLISF---------VTAGLGY-----------GVAYI 199
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSS-VVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ D +L ++ + + FD LG GL VN + S++ Y YI
Sbjct: 200 HYDDYALPGIDPV---SERHHFDSSIKGIYQLGAGLAVPVNPNWSINLRYAYIHMGKVH- 255
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINM 240
+ + + ++ N +GIN
Sbjct: 256 ---TSPNSLGPIELVLNNQNILIGINY 279
>gi|260467074|ref|ZP_05813254.1| porin opacity type [Mesorhizobium opportunistum WSM2075]
gi|259029183|gb|EEW30479.1| porin opacity type [Mesorhizobium opportunistum WSM2075]
Length = 282
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+ Y G GGA+V ++ + + + L G Y + I L A
Sbjct: 163 ITPYVGAGIGGAHVKWDTVYDPNTTETNPGSSN---WRFAYALMAGASYCLTDKIILDAG 219
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YR+ + + S DR N H G+ F
Sbjct: 220 YRFSHIQGGRMFEWDVSSAGPGFDRGINTHEVRGGLRYQF 259
>gi|2499351|sp|Q99124|OMPA_ESCBL RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|146989|gb|AAA24235.1| outer membrane protein II [Escherichia blattae]
Length = 241
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ +N G S V G++Y I+ Y++I
Sbjct: 16 YTRLGGMVWRADAKNNVVGGDRSNHDTGVSPVFAGGVEYAWTPSIATRLEYQWI------ 69
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + S+G++ F
Sbjct: 70 ----NNIGDAGTVGTRPDNGMLSVGVSYRF 95
>gi|58422905|gb|AAW73252.1| OmpA [Salmonella sp. CDC 156-87]
Length = 226
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+S+ + G S V G++Y + +I+ Y++ +N D
Sbjct: 21 ADTKSNTPGGESTKNHDTGVSPVFAGGIEYAITPEIATRLEYQW----------TNNIGD 70
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + + S+G++ F
Sbjct: 71 ANTIGTRPDNGLLSVGVSYRF 91
>gi|149286|gb|AAA25119.1| outer membrane protein II [Klebsiella pneumoniae]
Length = 243
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 16/112 (14%)
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K GY + D L IY G G S V G++
Sbjct: 1 LTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTG-----VSRSEHDTGVSPVFAGGVE 55
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ V DI+ Y+++ N D V + + + SLG++ F
Sbjct: 56 WAVTRDIATRLEYQWV----------NNIGDAGTVGTRPDNGMLSLGVSYRF 97
>gi|23013295|ref|ZP_00053207.1| COG3637: Opacity protein and related surface antigens
[Magnetospirillum magnetotacticum MS-1]
Length = 278
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 69/264 (26%), Gaps = 43/264 (16%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDL---FNEADNNVEYQDDEYGIWSGNYVGLHISR 65
L LS + + A DL + D V SG Y+ I
Sbjct: 8 LLACGLLSAITLRAAHAADLLPSAPLPELRGSLTPDVEV----------SGFYLRGDIGF 57
Query: 66 L-------YETHPLADTINRKTYNSLLPNGLGIELGHNI------------QLEDFVFGI 106
+ TI + G+ G+ + G+
Sbjct: 58 SNQSVERLSNSLDALGTIEKVNLGFAGAPLAGVGAGYRFNRWFRADVTGEFRSAATFTGL 117
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS----VDSLLIYGMGGFGGAYVIDSSLE 162
A + + V L GY L + G G A V + +
Sbjct: 118 E-RYRDASLPLGYGTDEYSATKRDAVALVNGYVDLGQWYGLTPFLGAGVGAAQVTLDNFK 176
Query: 163 KVESDNSKNAKG-RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS----VNNSN 217
A + L G+ Y V + ++ +YRY+ S N +
Sbjct: 177 DTNVVTQGLAYAKSTSKTSFAWALHAGIGYAVTPNFTIELAYRYLNLGDASTGTVYNYAG 236
Query: 218 AKSDVERVDRKG-NAHIASLGINM 240
E + K ++H LG+
Sbjct: 237 QCRTCEALTFKNTDSHDVKLGLRW 260
>gi|319781035|ref|YP_004140511.1| porin opacity type [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317166923|gb|ADV10461.1| porin opacity type [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 278
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 62/243 (25%), Gaps = 33/243 (13%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD--------- 74
A DL P I E + G Y+ I T D
Sbjct: 22 FAADL--PEPIVEEAPPQAVYEQPVEV----GGWYIRGDIDYHKSTVRGIDYMTYTVDPC 75
Query: 75 -----TINRKTYNSLLPNGLGIELGHNIQLEDFV-------FGINCHTTAAKDDSTFYRL 122
R L G + G ++ D + + D
Sbjct: 76 NCTVTPGTRSFDFGKLKGGFSLGAGVGYKINDHFRTDLTADYWFKSNFNGGTSDINGTST 135
Query: 123 KEKYFIYGDVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ ++ A + + + Y G GGA V + + +
Sbjct: 136 EVSKMSALLLLANAYVDLGTYHGITPYVGAGIGGARVKWDDVYDPNTTEFNPGRSS---W 192
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ L G Y + I L A YR+ + + N S DR N H G+
Sbjct: 193 RFAYGLMAGASYCLTDKIILDAGYRFSHIQGGRMFDWNITSSGPGFDRGINTHEVRGGLR 252
Query: 240 MHF 242
F
Sbjct: 253 YQF 255
>gi|288961579|ref|YP_003451889.1| outer membrane protein precursor [Azospirillum sp. B510]
gi|288913859|dbj|BAI75345.1| outer membrane protein precursor [Azospirillum sp. B510]
Length = 249
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 29/104 (27%), Gaps = 2/104 (1%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ + Y G + + + L G+D + + SL+
Sbjct: 146 ERISPYVGAGVNYTLFYNEDAANNPNSAGLRITDTNYKNRFGWALQAGVDVALTGNWSLN 205
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH--IASLGINMHF 242
+ I N+ + V V K + +G+ F
Sbjct: 206 VDVKKIFLKTDVTANARLGAAVVPVSSKVTLDPWLVGVGVGYRF 249
>gi|34496213|ref|NP_900428.1| hypothetical protein CV_0758 [Chromobacterium violaceum ATCC 12472]
gi|34102067|gb|AAQ58434.1| hypothetical protein CV_0758 [Chromobacterium violaceum ATCC 12472]
Length = 216
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 57/204 (27%), Gaps = 27/204 (13%)
Query: 56 GNYVGLHISRLYETHPLADTINRKT---YNSLLPNGLGIELGHNIQLEDFVFGINCHTT- 111
G Y+ ++ + DT + +S + G+ + F +
Sbjct: 23 GAYLFGNLGYNFAKPKKLDTQGVEGLSASHSAAGASWELGGGYRF---NDHFALEASYAD 79
Query: 112 --------AAKDDSTFYRLKEKYFIYGDVVLKAGYS--VDSLLIYGMGGFGGAYVIDSSL 161
AA+ D + + G L ++G Y S+
Sbjct: 80 FGKAKTSVAARTDDINGNVGVSLEATALRLAAVGILPVTSELELFGKVTLNQMYFNASAN 139
Query: 162 EKVES---DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
G + +G+G Y +N +SL Y Y+ ++ N +
Sbjct: 140 ASASIPALGFETAGSGSEKQNRLRPGIGLGAAYKINKQLSLRGEYEYVSLPNWTLPNGAS 199
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ HI GI+ F
Sbjct: 200 V-------MQNGMHIVKAGISYRF 216
>gi|156739632|gb|ABU93476.1| Omp25 [Brucella neotomae]
Length = 63
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 11/74 (14%)
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K I G + + GY ++ ++ Y G G+ + + N
Sbjct: 1 VKQGIEGSLRARVGYDLNLVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGW 49
Query: 184 VLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 50 TAGAGLEAKLTDNI 63
>gi|58422901|gb|AAW73250.1| OmpA [Enterobacter cloacae]
Length = 223
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D+S N G G S V G+++ + DI+ Y+++ N D V
Sbjct: 21 ADSSNNISGDNHDTGVSPVFAGGVEWAMTRDIATRLEYQWV----------NNIGDGNTV 70
Query: 226 DRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 71 GVRPDNGMLSVGVSYRF 87
>gi|212633149|ref|YP_002309674.1| outer membrane protein [Shewanella piezotolerans WP3]
gi|212554633|gb|ACJ27087.1| Outer membrane protein, putative [Shewanella piezotolerans WP3]
Length = 184
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 52/188 (27%), Gaps = 32/188 (17%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG I G G+N ++ FG+ +
Sbjct: 28 GAYVGGQIGAFSADVEGDSE---------SGQSYGAYGGYN--FNEW-FGLEGTI-YLTN 74
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D V K ++ +YG G V+ +
Sbjct: 75 DFVDNEYASVNAASFSVAPKFTLVLNDTFSLYGKIGLASVAVVTDTFI-----------R 123
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
D G + +G G++ V +++ Y + + S + D +
Sbjct: 124 DVDYQGFGLTVGAGVNAAVTDKLNIRLGYDFTSAELDSDDFGAQ-------DIDMDLSNV 176
Query: 235 SLGINMHF 242
+LG++ F
Sbjct: 177 TLGMHYQF 184
>gi|330809271|ref|YP_004353733.1| hypothetical protein PSEBR_a2449 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377379|gb|AEA68729.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 232
Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 54/209 (25%), Gaps = 33/209 (15%)
Query: 56 GNYVGLHISRLY-ETHPLADTIN-----RKTYNSLLPNGLGIELGHNI------------ 97
G YV + L N G+ +G
Sbjct: 31 GPYVSGMGGVNWVSKQDLTQNSNDFVEMEYNQPLHSGYATGLAVGWRFPVGLRPEVELSY 90
Query: 98 ------QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
Q + V+ ++ + ++ ++ Y GG
Sbjct: 91 RRNTMDQFNNRVYEGGSSIEGKGEEEASSLMANLWYDVSNLPA----PFSRFTPYVGGGL 146
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
G A + LE + G S+ LG G+ Y ++ S+S YRY
Sbjct: 147 GYAVLTIKGLEAGGVEF----GGTHRDTVSAWQLGAGVAYELSDHWSMSLDYRYFKTGEA 202
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ V + NA LG+
Sbjct: 203 NYGKIQGLVPA-DVKTEYNAQSLMLGLRY 230
>gi|585614|sp|P38368|OMP52_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; Flags:
Precursor
gi|388301|gb|AAA03346.1| outer membrane protein P5 [Haemophilus influenzae]
gi|301169904|emb|CBW29508.1| outer membrane protein A (3a;II*;G;d) [Haemophilus influenzae
10810]
Length = 353
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 59/193 (30%), Gaps = 13/193 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G+ + L K G+ G+ I L G+
Sbjct: 28 FYAGVKAGQASFHDGLRALAREKNVGYHRNSFTYGVFGGYQI-LNQNNLGLAVELGYDDF 86
Query: 116 DSTFYRLKEKY-----FIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
R K K + LK Y V D L +YG G E +++ +
Sbjct: 87 GRAKGREKGKTVAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRSDYKFYE--DANGT 144
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
++ K +S + +G +Y V ++++ Y+++ ++
Sbjct: 145 RDHKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYRPQDKPNTAINYNP 201
Query: 230 NAHIASLGINMHF 242
+ GI+ F
Sbjct: 202 WIGSINAGISYRF 214
>gi|156739610|gb|ABU93465.1| Omp25 [Brucella neotomae]
Length = 63
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 24/74 (32%), Gaps = 11/74 (14%)
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K G + + GY ++ ++ Y G G+ + + N
Sbjct: 1 VKQGFEGSLRARVGYDLNLVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGW 49
Query: 184 VLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 50 TAGAGLEAKLTDNI 63
>gi|153207688|ref|ZP_01946335.1| hypothetical protein A35_A1454 [Coxiella burnetii 'MSU Goat Q177']
gi|212219011|ref|YP_002305798.1| hypothetical protein CbuK_1487 [Coxiella burnetii CbuK_Q154]
gi|120576384|gb|EAX33008.1| hypothetical protein A35_A1454 [Coxiella burnetii 'MSU Goat Q177']
gi|212013273|gb|ACJ20653.1| hypothetical exported protein [Coxiella burnetii CbuK_Q154]
Length = 263
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 142 SLLIYGMGGFGGAYV--IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+YG G A + + + + S + + + + + V G+G+ + ISL
Sbjct: 153 RTHMYGKLGVSYAKLNQKLTVSQWMASLLQTSVQQKLNKNLWGYVAGLGIAEDLGRGISL 212
Query: 200 SASYRYIPHHIHSVNN------SNAKSDVERVDRKGNAHIASLGINMHF 242
A Y Y + + + S+ D+ A+ +G N+ F
Sbjct: 213 FAEYDYYDYGKNDLKTLRNIFPSSVLVDIYTQKVLVGAYTIRVGFNIEF 261
>gi|52425275|ref|YP_088412.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307327|gb|AAU37827.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 273
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 57/194 (29%), Gaps = 21/194 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNI-QLEDFVFGINC---HTT 111
Y G + N ++ + G+ G+ I +F +
Sbjct: 28 FYAGARAGWASFHDGVDAFHNSDGLSAKKNSVTYGVFGGYQILNQNNFGLAVELGYDDYG 87
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ T + + ++ +K Y V D L +Y G + +S
Sbjct: 88 RIRLIETDAKRGKFTNHGVNLSIKPSYEVLDGLDVYARVGAALIRTDYKDYSIDAAGHSL 147
Query: 171 NAKGRFDGHGSSVVLGIGLDYM--VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
S GL+Y + ++++ Y++I +V S D
Sbjct: 148 ---------KVSPTFAAGLEYALPILPELAMRLEYQWI----ENVGRDQKWSGYNDADFT 194
Query: 229 GNAHIASLGINMHF 242
+ + G++ F
Sbjct: 195 PDIGAVTFGLSYRF 208
>gi|254474292|ref|ZP_05087682.1| hypothetical protein PJE062_2423 [Pseudovibrio sp. JE062]
gi|211956666|gb|EEA91876.1| hypothetical protein PJE062_2423 [Pseudovibrio sp. JE062]
Length = 219
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 55/196 (28%), Gaps = 12/196 (6%)
Query: 56 GNYVGLHIS-RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
G YVG ++ + + L + G + + + +
Sbjct: 27 GTYVGFAGGLVSNAKEDVSAPGLKSSLERKLGFNASLNAGKRL---NEYLRVQADIGYLR 83
Query: 115 DD-STFYRLKEKYFIYGDVVLKAGYSVDSLL-------IYGMGGFGGAYVIDSSLEKVES 166
K K + V A D L I G + +++
Sbjct: 84 SGFDKIDGEKVKKGSFSAVHASASVYFDYSLTESFTPFIGIGAGLASFDMGKVTIDNAHW 143
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ + L G Y + ++S+ Y ++ + NA + +
Sbjct: 144 GYPSETYEVQESVTPFLKLNAGAAYKLTDNLSVVGEYNFMQSADFEFSAKNAPAGSPDIT 203
Query: 227 RKGNAHIASLGINMHF 242
+HIA +G+ +F
Sbjct: 204 TSFQSHIAQVGLRYNF 219
>gi|46200841|ref|ZP_00207866.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 342
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 51/189 (26%), Gaps = 13/189 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVGL + S + +G+ + ++
Sbjct: 26 WYVGLDAGAQLLQDSKNSGVAGLKSESDVGWLTQGVVGYA--FGQWRAEGELSYRSSGVS 83
Query: 117 STFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ Y + G G A + + +++K ++
Sbjct: 84 KVGGATGSGDTSALAPMFNGVYEFLPQSKWHPFVGLGIGAARLDNGTVKKNGANAYSG-- 141
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
D + G+ Y + ++ L A YRY S A + ++D + H
Sbjct: 142 ---DDWQFAYQGFAGVGYDLTSNVELKAQYRYF---STLNYESKAATTNTKLDSEYRDHG 195
Query: 234 ASLGINMHF 242
LG F
Sbjct: 196 LMLGFVYKF 204
>gi|260772262|ref|ZP_05881178.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
gi|260611401|gb|EEX36604.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
Length = 327
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 56/186 (30%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + + + L D+ +G LG+N L ++ + +
Sbjct: 24 YLGGKLGQTW----LNDSCRAGEVCEDRDTSMGAFLGYN--LNEW-LAVEAGYDMLGKFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
++ + K S+ + Y G
Sbjct: 77 GIGLADDRVKAI-TLAPKFTLSLSPSVGAYAKLGGAYVDYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
D S + GL++ V+ ++SL Y+ +D+ + A+ SL
Sbjct: 117 DESDYSFLAAAGLEFNVSPNVSLRTEYQ-------------VLTDINNDQTRAEANTVSL 163
Query: 237 GINMHF 242
G++ F
Sbjct: 164 GVSYRF 169
>gi|239950061|gb|ACS36762.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 282
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 56/161 (34%), Gaps = 16/161 (9%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-I 145
G+ G+ I +++ + K+ +G + LK Y V + L +
Sbjct: 11 TYGVFGGYQI-IDNLAVELGYDYFGRVRGKEQEFRAFKHSAHGTHLSLKPSYEVLNGLDV 69
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
YG G + + + +S++LG G++Y + +++ Y++
Sbjct: 70 YGKVGAALVRNDYKFYDTED---------KAHNLKTSLLLGAGVEYAILPELAFRVEYQW 120
Query: 206 I----PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + +AH S GI+ F
Sbjct: 121 LSRVGNANKAAQKRGDTAMFGPGSTYSPDAHSVSAGISYRF 161
>gi|323969553|gb|EGB64842.1| outer membrane insertion protein [Escherichia coli TA007]
Length = 249
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 62/223 (27%), Gaps = 36/223 (16%)
Query: 55 SGNYVGLHISRL--------YETHPLADTINRKTYNSLLP-NGLGIELGHN-IQLEDFVF 104
+G Y+ + D K + G G+ +G++ Q +
Sbjct: 28 TGFYITGKAGASVITQDNQRFSQDFGDDVYKYKGGDKSDTVFGAGLAVGYDFYQHYNVPV 87
Query: 105 GINCHTTAAKDDSTFYRL------KEKYFIYGDVVLKAG---------YSVDS---LLIY 146
++ Y L D + Y + +
Sbjct: 88 RTEVEFYGRGSANSRYPLDTWESPSGDNGWKEDTQNRLSVNTLMVNTYYDFRNSSAFTPW 147
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-------GHGSSVVLGIGLDYMVNYDISL 199
G G A V + S N + + LG+G+ Y V D SL
Sbjct: 148 VSAGLGYARVHHKATYTDTSWNKSGEVSDASSLHYSGYDNNFAWSLGVGVKYEVTPDFSL 207
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+YRY+ ++ + + D + ++ +LG F
Sbjct: 208 DLAYRYLDAGDSTLTYEDGQ-DTYKSSVDVRSNEFTLGATYSF 249
>gi|114778405|ref|ZP_01453252.1| outer membrane protein A precursor [Mariprofundus ferrooxydans
PV-1]
gi|114551368|gb|EAU53925.1| outer membrane protein A precursor [Mariprofundus ferrooxydans
PV-1]
Length = 360
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 62/206 (30%), Gaps = 37/206 (17%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPN---------GLGIELGHNIQLEDFVFG 105
SG Y+G ++ + + NR + L G + G+ Q +
Sbjct: 11 SGFYLGGNVGQSVSHLDESGMTNRVSGPGLAITSVTRDNRDIGYKLYGGY--QANKY-LS 67
Query: 106 IN------CHTTAAKDDSTFYRLKEKYFIYG---DVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ + L + G D +++ + D ++G GG A
Sbjct: 68 LESGWFDLGRFNFTSTTTPAGSLLGNIKVRGVNLDALIRLPLT-DQFSVFGRGGLTYAQT 126
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
DS NA + + G+GLDY + + A + +
Sbjct: 127 RDSFSTTGALALPANASPK--KWAWNPKYGVGLDYNLTRAFGIRAEAERYRINDAT---- 180
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
KGN + SLG+ F
Sbjct: 181 ---------GSKGNIDLFSLGMTYRF 197
>gi|14578652|gb|AAK68933.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + YR++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYRWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + ++G++ F
Sbjct: 64 AGTVGARPDNSMLTVGVSYRF 84
>gi|316935832|ref|YP_004110814.1| porin [Rhodopseudomonas palustris DX-1]
gi|315603546|gb|ADU46081.1| porin [Rhodopseudomonas palustris DX-1]
Length = 281
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/256 (11%), Positives = 63/256 (24%), Gaps = 36/256 (14%)
Query: 22 HSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTY 81
+ A L + Y + G Y+ I + Y
Sbjct: 9 AAGAASLIASAAMAADMPIAPPPAYAPPPAEDFGGWYLRGDIGFSNQQVKDLRYGRESAY 68
Query: 82 NS-------LLPNGLGIEL-GHNIQLEDFVFG-----------------INCHTTAAKDD 116
+ + GI G Q ++ + A
Sbjct: 69 SQLTSFDQQTSFDSAGIYGLGVGYQFNPWLRADLIGQYRGNSNFKGTDRFTGTASGAPYS 128
Query: 117 STFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
K + + + G G A V ++ ++ +
Sbjct: 129 GIDNYGASKSEWLVMANAYVDLGTWWCITPFVGAGVGAARVTMANFTDTGTNTIPFSTTS 188
Query: 176 F------DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD--- 226
F + + GL Y VN +++L +Y Y+ + + + + +
Sbjct: 189 FASAPTASKWNLAWAVHTGLAYKVNPNLTLELAYSYLNLGDGYTGSLSTYTGLTTNNSFK 248
Query: 227 -RKGNAHIASLGINMH 241
+ +H LG+ +
Sbjct: 249 FKDITSHDVKLGVRWN 264
>gi|212703520|ref|ZP_03311648.1| hypothetical protein DESPIG_01565 [Desulfovibrio piger ATCC 29098]
gi|212673020|gb|EEB33503.1| hypothetical protein DESPIG_01565 [Desulfovibrio piger ATCC 29098]
Length = 218
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 48/161 (29%), Gaps = 8/161 (4%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG------DVVLKAGYSVD 141
G + G++ ++ + A ++ + + Y
Sbjct: 60 GGALAAGYDF-WPQYLVPVRVELEYALRGNSEKSWGSNWGSVDCTWNSSTLFANLYYDFR 118
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+ + G + + L N + +G G+ Y VN + + A
Sbjct: 119 NDSAFVPYIGAGIGMSFNYLGFDLHRNGSAVSRDESTTNFAWNVGAGVAYNVNDALYIDA 178
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+YRY+ + + D +V + H LG+ F
Sbjct: 179 AYRYVDLGYTEASGAL-NGDQIKVGSRPYNHEFMLGLRFAF 218
>gi|160873823|ref|YP_001553139.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160859345|gb|ABX47879.1| OmpA/MotB domain protein [Shewanella baltica OS195]
Length = 369
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 64/232 (27%), Gaps = 32/232 (13%)
Query: 13 VFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPL 72
+ LS++ + A + P ++ ++ + + Y+G I + H
Sbjct: 21 ILLSLLCYGVTHAAEQQNPAQLIDEDKPQTLITLPEAY------LYMGSEIGINHYQHGC 74
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF-IYGD 131
NS + + G+ + Y K G
Sbjct: 75 ESWSIDCDKNSTMASFF---AGYQF---NHHLAFEVAYIDLGKAEATYLEASKQNIYQGS 128
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ G ++ S+ G + + + + D S G+G+ Y
Sbjct: 129 MR---GLNLSSVASIDFGADLALFAKAGVFNWHGENKGPFSTIKADDW--SPSFGVGMTY 183
Query: 192 MVNYDISLSASYRY-IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ Y Y + +NA H SLGI+ F
Sbjct: 184 QLSDSWQARLQYEYFHHLGNDDIGGTNA-------------HATSLGISYQF 222
>gi|315266048|gb|ADT92901.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 365
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 64/232 (27%), Gaps = 32/232 (13%)
Query: 13 VFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPL 72
+ LS++ + A + P ++ ++ + + Y+G I + H
Sbjct: 17 ILLSLLCYGVTHAAEQQNPAQLIDEDKPQTLITLPEAY------LYMGSEIGINHYQHGC 70
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF-IYGD 131
NS + + G+ + Y K G
Sbjct: 71 ESWSIDCDKNSTMASFF---AGYQF---NHHLAFEVAYIDLGKAEATYLEASKQNIYQGS 124
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ G ++ S+ G + + + + D S G+G+ Y
Sbjct: 125 MR---GLNLSSVASIDFGADLALFAKAGVFNWHGENKGPFSTIKADDW--SPSFGVGMTY 179
Query: 192 MVNYDISLSASYRY-IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ Y Y + +NA H SLGI+ F
Sbjct: 180 QLSDSWQARLQYEYFHHLGNDDIGGTNA-------------HATSLGISYQF 218
>gi|258625264|ref|ZP_05720172.1| outer membrane protein OmpA [Vibrio mimicus VM603]
gi|258582437|gb|EEW07278.1| outer membrane protein OmpA [Vibrio mimicus VM603]
Length = 328
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 51/186 (27%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + ++ LG Q + + +
Sbjct: 30 YVGGKVGKSWLDDACLANQTCNDDDEVVGAFLG------YQANKW-LSVEAGYDYLGKFT 82
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
EK + + + + +YG G
Sbjct: 83 AAGLADEKVQAV-TLAPRLSLPLTEAIALYGKVGGAYVDYG------------------- 122
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S + GL++ N+++++ Y+ +D+ + NA A+L
Sbjct: 123 SKSDYSYLGAAGLEFNTNHNVTMRLEYQ-------------NITDINNDIVRANAETATL 169
Query: 237 GINMHF 242
GI F
Sbjct: 170 GIAYKF 175
>gi|163743238|ref|ZP_02150619.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10]
gi|161383426|gb|EDQ07814.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10]
Length = 135
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 36/126 (28%), Gaps = 23/126 (18%)
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
+ G+ LG++ V G + R + L+AGY + L Y
Sbjct: 15 SASGLHLGYDHDFGRVVLGGEVEVDRSG----RVRSDLTEDQTRRIKLRAGYDMGETLGY 70
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G + V G+GL Y +N + +S Y +
Sbjct: 71 VTVGSARNET-------------------ATDSDNGAVYGLGLSYSLNRALRVSGEYLHQ 111
Query: 207 PHHIHS 212
+
Sbjct: 112 DASDGA 117
>gi|299134298|ref|ZP_07027491.1| porin, opacity type [Afipia sp. 1NLS2]
gi|298591045|gb|EFI51247.1| porin, opacity type [Afipia sp. 1NLS2]
Length = 270
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 57/218 (26%), Gaps = 36/218 (16%)
Query: 56 GNYVGLHIS----------RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF--- 102
G Y+ I L ++ + G+ G+ Q +
Sbjct: 40 GWYLRGDIGLSNQSIKDRHYSRYDTDLVPGSLQQNTHFGQAGIFGVGAGY--QFNSWFRM 97
Query: 103 -VFG---INCHTTAAKD-----------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
V G + T + K ++ + G + + +
Sbjct: 98 DVTGEYRARSNYTGRDTFLANPSPGTPGADNYNGYKSEWLFLTNAYADLG-TWWCITPFV 156
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNA-KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G G A V D + + L GL Y ++ + ++ +YRY+
Sbjct: 157 GAGIGAARVTLGGFNDHLDDGTLTGIASDASKWNFAWALHAGLAYKISPNWTMELAYRYV 216
Query: 207 PHHIHS----VNNSNAKSDVERVDRKGNAHIASLGINM 240
+ N + + +H LG+
Sbjct: 217 DMGNGATGILYNTNGTTINQAMHFNHITSHDVKLGVRW 254
>gi|239832776|ref|ZP_04681105.1| Hypothetical protein OINT_1002061 [Ochrobactrum intermedium LMG
3301]
gi|239825043|gb|EEQ96611.1| Hypothetical protein OINT_1002061 [Ochrobactrum intermedium LMG
3301]
Length = 229
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 55/192 (28%), Gaps = 19/192 (9%)
Query: 55 SGNYVGLHISRLYE---THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
SG Y+ I + L + +G Q D + G T
Sbjct: 48 SGWYLRGDIGYNISSKVKVQTETAFWSASQGYDLDKNVVPSVGVGYQFTDNLRG---DVT 104
Query: 112 AAKDDSTFYRLKE---KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+F L + + + + G Y G G A V S D
Sbjct: 105 FGYSKQSFDDLDVDVRSWDMMANAYVDLGNYYG-FTPYLGAGLGFANVRYSI------DT 157
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
A D + + L G+ V +I L YRY + ++ + + D+
Sbjct: 158 VYGAYKADDDYRLAWALMAGVGIDVASNIKLDVGYRYGVIEGADIASA---AGITLSDKD 214
Query: 229 GNAHIASLGINM 240
+H G+
Sbjct: 215 IQSHQLRAGVRF 226
>gi|157962526|ref|YP_001502560.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157847526|gb|ABV88025.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 324
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/193 (11%), Positives = 42/193 (21%), Gaps = 54/193 (27%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + + N + G+ G+N+ + + +
Sbjct: 33 FYFGAKLGGA---LLDSQAKQEPEENKAVNLSSGLVFGYNL---NRYLALESDLSYLGKG 86
Query: 117 STFYRLKEKYF-------IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ Y + D +Y G S
Sbjct: 87 QDKQQSTLSADKHLFSIATYLSTRYRLS---DEASLYFKLGPAWVNDDISISS------- 136
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G+G+ Y + L YR+I +
Sbjct: 137 ----------------GLGIKYRFSPRWELDTGYRWI---------------KDTPSTDD 165
Query: 230 NAHIASLGINMHF 242
+ + +LG N F
Sbjct: 166 DLYEFTLGFNYKF 178
>gi|153835168|ref|ZP_01987835.1| outer membrane protein [Vibrio harveyi HY01]
gi|148868362|gb|EDL67484.1| outer membrane protein [Vibrio harveyi HY01]
Length = 330
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/194 (13%), Positives = 51/194 (26%), Gaps = 42/194 (21%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAA 113
S Y+G + A +G LG+ V +G++
Sbjct: 23 SDFYIGSKLGYSQVDSDCASEFQC----DKDSASVGAYLGYQYNDNVAVEYGVDYLGHHT 78
Query: 114 KDDSTFYRLKE--KYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
L + + + K YS+ D+L ++ G + +
Sbjct: 79 TSKKRSLHLTDVLTTDVLAISLAPKFSYSLTDNLALFTKIGAAYMIAEEENDVVA----- 133
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRK 228
G +Y + ++ L A Y R+ +
Sbjct: 134 --------------TASAGAEYALTQNLKLRAEYQRFEKMSDIHIE-------------D 166
Query: 229 GNAHIASLGINMHF 242
+ + S GI+ F
Sbjct: 167 MSFNNFSFGISYQF 180
>gi|89076013|ref|ZP_01162376.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
gi|89048248|gb|EAR53829.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
Length = 355
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 52/179 (29%), Gaps = 27/179 (15%)
Query: 57 NYVGLHISRL---------YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
Y G+ + Y + + G+ +G+N+ + F I
Sbjct: 27 FYAGVRAGGVHYSDFDSKNYANGTYDQELQNRNAIDRDDFAAGLFMGYNVT--PW-FAIE 83
Query: 108 CHTTAAK----DDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLE 162
T + L + D+V K Y + D + +Y G +
Sbjct: 84 GGYTWLGEATLKGDEHHNLGKVEQQAIDLVGKFTYQATDKVDLYTKVGGAWQFTRAKVEG 143
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
D + G+G +Y ++S A Y+Y + ++ K +
Sbjct: 144 ---------VGSDRDDSLIA-TAGLGAEYHFTDNLSARAEYQYYHNMETKPTGTDTKFN 192
>gi|153008557|ref|YP_001369772.1| hypothetical protein Oant_1226 [Ochrobactrum anthropi ATCC 49188]
gi|151560445|gb|ABS13943.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 229
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 70/232 (30%), Gaps = 23/232 (9%)
Query: 13 VFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE---T 69
+ + V + S A DL I A + SG Y+ I
Sbjct: 14 LLAGLCVASQSFAADL---DMISYEPGAPVQQPVEVG-----SGWYLRGDIGYNLSSKVK 65
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK-YFI 128
+ + + L + +G Q D + G + +K Y + + + +
Sbjct: 66 VQTETSFWSASQSYDLDKNVVPSVGVGYQFTDNLRG-DVTLGYSKQSFDDYDVDVRSWDM 124
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
+ + G Y G G A V S D + D + + L G
Sbjct: 125 MANAYVDLGNYYG-FTPYLGAGLGFANVRYSI------DTAYGNYKTDDDYRLAWALMAG 177
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ V +I L YRY + ++ + + D+ +H G+
Sbjct: 178 VGIDVASNIKLDIGYRYGVIEGADIASA---AGLTLSDKDIQSHQLRAGVRF 226
>gi|328470939|gb|EGF41850.1| outer membrane protein OmpA [Vibrio parahaemolyticus 10329]
Length = 329
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 51/186 (27%), Gaps = 32/186 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + L D + G G+ +G++ G+ D
Sbjct: 27 YIGGKVG----MTTLDDACYLNSPCDDEAFGAGLHIGYDFTD---FIGLEYGVDFLGDYK 79
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
++ ++D L + ++ S +
Sbjct: 80 ANFKSGASTVD----------TIDGNLTALTLAPKFNWHLNDSWNLFAKIGGAYMMSEDE 129
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ +G +Y ++ + S+ A Y RY + +A+ +
Sbjct: 130 KDFVA-TGSLGAEYSIDRNWSVRAEYQRYQDMSDDVWD-------------DMDANFFGI 175
Query: 237 GINMHF 242
G+N F
Sbjct: 176 GVNYKF 181
>gi|29653658|ref|NP_819350.1| OmpA-like transmembrane domain-containing protein [Coxiella
burnetii RSA 493]
gi|161831470|ref|YP_001596256.1| outer membrane protein [Coxiella burnetii RSA 331]
gi|29540920|gb|AAO89864.1| outer membrane protein [Coxiella burnetii RSA 493]
gi|161763337|gb|ABX78979.1| outer membrane protein [Coxiella burnetii RSA 331]
Length = 231
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/208 (12%), Positives = 58/208 (27%), Gaps = 35/208 (16%)
Query: 55 SGNYVGLHISRLYETHPLADTI----------NRKTYNSLLPNGLGIELGHNIQLEDFVF 104
+G Y+ ++ Y T + G +LG+ Q + F
Sbjct: 37 AGVYLEGNLGYAYRPWRKDATTVVGLAKQARLLGSSSRGNGGFTFGADLGY--QFNQY-F 93
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGGFGGA 154
+ G +K+G + ++ ++G G
Sbjct: 94 AVEGGWFYLPKVKFTTTGVVNGLAAGTYTVKSGMAYAALKGMAPVYENTYVFGKLGVAYT 153
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
Y ++ N A + + G+ Y + S++A Y ++
Sbjct: 154 YNRANAGLPT---NKIPATFGSRSRFWNPLFAAGVQYYFTPNWSVNAQYTFV-------- 202
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + H+ ++G+ F
Sbjct: 203 -PGYRNASSKRFVAPVTHLFTVGLGYKF 229
>gi|54294317|ref|YP_126732.1| hypothetical protein lpl1382 [Legionella pneumophila str. Lens]
gi|53754149|emb|CAH15622.1| hypothetical protein lpl1382 [Legionella pneumophila str. Lens]
Length = 254
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 68/202 (33%), Gaps = 24/202 (11%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGI----ELGHN-IQLEDFVFGINCHTTAAKDDSTF 119
++ + + +N ++ +GLG+ LG+ + G+ + ++
Sbjct: 52 YNFKRNETSQELNFTDFDHFDWHGLGLGGEIYLGYEKFFRTHYYIGLEGFFNRSSNEGKI 111
Query: 120 Y------------RLKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGGAYVIDSSLEK-VE 165
Y + K + + G+ + S+ +IYG G+ + V S
Sbjct: 112 YFFDSNELYSRILKGSFKQKWQSGLAIHPGFYLPSVGIIYGRVGWIVSDVNLSGSITQSG 171
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-----HHIHSVNNSNAKS 220
S + + + V LG GL+ + + + + +++N +
Sbjct: 172 PFGSFSGRFSNTKKKNGVQLGTGLELELTKNWRCRVEWDWNRLQDFIFDSQGRDSNNHRY 231
Query: 221 DVERVDRKGNAHIASLGINMHF 242
R+ + LG+N F
Sbjct: 232 QTTRIAKHPILEQFKLGLNWRF 253
>gi|117619103|ref|YP_858241.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560510|gb|ABK37458.1| outer membrane protein P5 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 352
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/190 (12%), Positives = 56/190 (29%), Gaps = 19/190 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + + Y + G G LG+ I G+
Sbjct: 27 WYGGAKLGWSNFYGVDHNQAIKDDYAISEEDKNDVGAGAFLGYQINQN---LGVELGYDW 83
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
Y+ + + + + G + +D + ++
Sbjct: 84 LGK----YKYTATDKLIPTDISRDEIKAQLAQLTMKIGLPVSESLDLYTRLGGAYAWTDS 139
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
K + +G++ V +G +Y N D + Y+Y +++ + +
Sbjct: 140 KQLDNDNGAAFVGALGAEYAFNRDWAARLEYQYT--------TPLGDKALDKTGAELDNG 191
Query: 233 IASLGINMHF 242
+ ++G+ F
Sbjct: 192 LLAVGVVYRF 201
>gi|258621036|ref|ZP_05716070.1| outer membrane protein OmpA [Vibrio mimicus VM573]
gi|262166295|ref|ZP_06034032.1| outer membrane protein A precursor [Vibrio mimicus VM223]
gi|258586424|gb|EEW11139.1| outer membrane protein OmpA [Vibrio mimicus VM573]
gi|262026011|gb|EEY44679.1| outer membrane protein A precursor [Vibrio mimicus VM223]
Length = 322
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 51/186 (27%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + ++ LG Q + + +
Sbjct: 24 YVGGKVGKSWLDDACLANQTCNDDDEVVGAFLG------YQANKW-LSVEAGYDYLGKFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
EK + + + + +YG G
Sbjct: 77 AAGLADEKVQAV-TLAPRLSLPLTEAIALYGKVGGAYVDYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S + GL++ N+++++ Y+ +D+ + NA A+L
Sbjct: 117 SKSDYSYLGAAGLEFNTNHNVTMRLEYQ-------------NITDINNDIVRANAETATL 163
Query: 237 GINMHF 242
GI F
Sbjct: 164 GIAYKF 169
>gi|12382049|gb|AAG52997.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382051|gb|AAG52998.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382053|gb|AAG52999.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|209886274|ref|YP_002290131.1| porin, opacity type [Oligotropha carboxidovorans OM5]
gi|209874470|gb|ACI94266.1| porin, opacity type [Oligotropha carboxidovorans OM5]
Length = 272
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/216 (12%), Positives = 58/216 (26%), Gaps = 32/216 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTY-------NSLLPNGLGIEL-GHNIQLEDFV---- 103
G Y+ I + T S + GI G Q ++
Sbjct: 41 GWYLRGDIGFSNQRIKERHYSRYDTDLVPGSLNQSTHFDSAGIYGLGVGYQFNSWLRMDV 100
Query: 104 ---FGINCHTTAAKD-----------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+ + + K ++ + + G + ++ +
Sbjct: 101 TGEYRAKSNYRGRDTFLVSPSPGTAGADNYTGHKSEWLVLTNAYADLG-TWWNITPFVGA 159
Query: 150 GFGGAYVIDSSLEKVESDNSKNA-KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
G G A V + + L GL Y + + ++ +YRY+
Sbjct: 160 GIGAARVTLGGFNDYLDNGVHTGVAADASKWNFAWALHAGLAYKLAPNWTMELAYRYVDM 219
Query: 209 HIHS---VNNSNAKSDVERVDRK-GNAHIASLGINM 240
+ N++ + + + K +H G+
Sbjct: 220 GDGVTGILYNTDGSTINQAMHFKHITSHDLKFGVRW 255
>gi|14578648|gb|AAK68931.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGHISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGSRPDNSMLSVGVSYRF 84
>gi|330828258|ref|YP_004391210.1| outer membrane protein A [Aeromonas veronii B565]
gi|328803394|gb|AEB48593.1| Outer membrane protein A [Aeromonas veronii B565]
Length = 345
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 54/193 (27%), Gaps = 32/193 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD- 115
Y G + + G G+ G+ I G+ +
Sbjct: 27 WYGGAKLGWSNFYGIDESNALTLGNETNDALGAGVFGGYQINKN---LGLELGYDYLGNY 83
Query: 116 --DSTFYRLKEKYFI---YGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
D+T + + LK G+ V D+L +YG G G + S
Sbjct: 84 KYDATTAAGAFSDEVKAQLAQLTLKLGFPVTDNLDLYGRVGGGYGWADTKSDVY------ 137
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D +V +G +Y N D + Y+Y + + +
Sbjct: 138 ------KDDSRFVMVGALGAEYAFNLDWAARLEYQY----------TTPYGSRDDTGLRM 181
Query: 230 NAHIASLGINMHF 242
+ + SL F
Sbjct: 182 DNGLLSLAAVYRF 194
>gi|260581134|ref|ZP_05848955.1| outer membrane protein P5 [Haemophilus influenzae RdAW]
gi|260092263|gb|EEW76205.1| outer membrane protein P5 [Haemophilus influenzae RdAW]
Length = 353
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 56/193 (29%), Gaps = 13/193 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G+ + L G+ G+ I L G+
Sbjct: 28 FYAGVKAGQASFHDGLRALAREYKVGYHRNSFTYGVFGGYQI-LNQNNLGLAVELGYDDF 86
Query: 116 DSTFYRLKEKYFIYGD-----VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
R K K + + LK Y V L +YG G V E+ ++
Sbjct: 87 GRAKGREKGKTVVKHTNHGTHLSLKGSYEVLEGLDVYGKAGVAL--VRSDYKLYNENSST 144
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G +S + +G +Y V ++++ Y+++ ++
Sbjct: 145 LKKLGEHHRARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYRPQDKPNTALNYNP 201
Query: 230 NAHIASLGINMHF 242
+ GI+ F
Sbjct: 202 WIGSINAGISYRF 214
>gi|28901041|ref|NP_800696.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|153837129|ref|ZP_01989796.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|260362470|ref|ZP_05775403.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
gi|260879890|ref|ZP_05892245.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|260894565|ref|ZP_05903061.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|260900439|ref|ZP_05908834.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|28809554|dbj|BAC62529.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|149749546|gb|EDM60292.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|308086367|gb|EFO36062.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|308092443|gb|EFO42138.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|308107064|gb|EFO44604.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|308113361|gb|EFO50901.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
Length = 329
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 51/186 (27%), Gaps = 32/186 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + L D + G G+ +G++ G+ D
Sbjct: 27 YIGGKVG----MTTLDDACYLNSPCDDEAFGAGLHIGYDFTD---FIGLEYGVDFLGDYK 79
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
++ ++D L + ++ S +
Sbjct: 80 ANFKSGASTVD----------TIDGNLTALTLAPKFNWHLNDSWNLFAKIGGAYMMSEDE 129
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ +G +Y ++ + S+ A Y RY + +A+ +
Sbjct: 130 KDFVA-TGSLGAEYSIDRNWSVRAEYQRYQDMSDDVWD-------------DMDANFFGI 175
Query: 237 GINMHF 242
G+N F
Sbjct: 176 GVNYKF 181
>gi|12382117|gb|AAG53031.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382119|gb|AAG53032.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382121|gb|AAG53033.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTFGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|117618437|ref|YP_858623.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559844|gb|ABK36792.1| outer-membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 368
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 64/198 (32%), Gaps = 24/198 (12%)
Query: 57 NYVGLHISRL-----YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
Y G + ++DT+ S + LG+ QL G
Sbjct: 28 WYAGGKAGWSKFFDVDQKQVVSDTLGALQNTSTSKDTLGLGAFAGYQLNPN-LGFEFGYD 86
Query: 112 AAK---DDSTFYRLKEKYFI---YGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKV 164
++ + +K G+ V+ L +YG G G A+ +
Sbjct: 87 WFGKYTSSGELSGVRVEGEAKSQMIQTTMKIGFPVNDALDLYGRIGGGYAWTNSELSAQT 146
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+D K+ + HG+ V +G +Y ++ D + Y+Y + ++R
Sbjct: 147 ATDFIKDTG---NKHGAVFVGALGAEYAIDRDWAARLEYQYT--------TPLGDTSLDR 195
Query: 225 VDRKGNAHIASLGINMHF 242
+ + + + + F
Sbjct: 196 SGIEMDNGMLAFAMIYRF 213
>gi|320577116|gb|ADW54067.1| outer membrane protein A [Sodalis glossinidius]
Length = 216
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 53/157 (33%), Gaps = 18/157 (11%)
Query: 88 GLGIELGHNIQLEDFV-FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLI 145
G G LG+ Q ++ FG+ + K Y + D L I
Sbjct: 1 GAGAFLGY--QANPYLGFGLGYDWLGRMAYKGSVNNGAFKAQGISLAAKLSYPLTDDLDI 58
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y G ++ + K DN + G S + +GL+Y + + Y++
Sbjct: 59 YTRLG----GMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQW 114
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N D V + + + S+G++ F
Sbjct: 115 V----------NNIGDAGTVGTRPDNSMLSVGVSYRF 141
>gi|227355635|ref|ZP_03840029.1| OmpW family bacterial porin [Proteus mirabilis ATCC 29906]
gi|227164242|gb|EEI49135.1| OmpW family bacterial porin [Proteus mirabilis ATCC 29906]
Length = 213
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 1/107 (0%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + D L Y G D + + GLDY ++
Sbjct: 108 FGGAEDKLRPYLGAGLNFTTFFDEKFNNNPAVGQLGLNDLDLKNSWGFAAQAGLDYNLDK 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+AS ++ V + + +VD + + + G+ F
Sbjct: 168 NWMLNASVWWMNIET-DVKFKDGDGNHYKVDTRLDPFVFMFGVGYRF 213
>gi|16273088|ref|NP_439322.1| outer membrane protein P5 [Haemophilus influenzae Rd KW20]
gi|1171899|sp|P43840|OMP51_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; Flags:
Precursor
gi|1574091|gb|AAC22819.1| outer membrane protein P5 (ompA) [Haemophilus influenzae Rd KW20]
Length = 353
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 56/193 (29%), Gaps = 13/193 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G+ + L G+ G+ I L G+
Sbjct: 28 FYAGVKAGQASFHDGLRALAREYKVGYHRNSFTYGVFGGYQI-LNQNNLGLAVELGYDDF 86
Query: 116 DSTFYRLKEKYFIYGD-----VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
R K K + + LK Y V L +YG G V E+ ++
Sbjct: 87 GRAKGREKGKTVVKHTNHGTHLSLKGSYEVLEGLDVYGKAGVAL--VRSDYKLYNENSST 144
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G +S + +G +Y V ++++ Y+++ ++
Sbjct: 145 LKKLGEHHRARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYRPQDKPNTALNYNP 201
Query: 230 NAHIASLGINMHF 242
+ GI+ F
Sbjct: 202 WIGSINAGISYRF 214
>gi|197285209|ref|YP_002151081.1| outer membrane protein W [Proteus mirabilis HI4320]
gi|194682696|emb|CAR42853.1| outer membrane protein [Proteus mirabilis HI4320]
Length = 213
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 1/107 (0%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + D L Y G D + + GLDY ++
Sbjct: 108 FGGAEDKLRPYLGAGLNFTTFFDEKFNNNPAVGKLGLNDLDLKNSWGFAAQAGLDYNLDK 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+AS ++ V + + +VD + + + G+ F
Sbjct: 168 NWMLNASVWWMNIET-DVKFKDGDGNHYKVDTRLDPFVFMFGVGYRF 213
>gi|163736519|ref|ZP_02143938.1| hypothetical protein RGBS107_15346 [Phaeobacter gallaeciensis
BS107]
gi|161390389|gb|EDQ14739.1| hypothetical protein RGBS107_15346 [Phaeobacter gallaeciensis
BS107]
Length = 135
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 36/126 (28%), Gaps = 23/126 (18%)
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
+ G+ LG++ V G + R + L+AGY + L Y
Sbjct: 15 SASGLHLGYDHDFGLVVLGGEVEVDRSG----RARSDLTEDQTRRIKLRAGYDMGETLGY 70
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G + V G+GL Y +N + +S Y +
Sbjct: 71 VTVGSARNET-------------------ATDSDNGAVYGLGLSYSLNRALRVSGEYLHQ 111
Query: 207 PHHIHS 212
+
Sbjct: 112 DASDGA 117
>gi|12382123|gb|AAG53034.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTFGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|145297581|ref|YP_001140422.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850353|gb|ABO88674.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 343
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 32/192 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN------CHT 110
Y G + + I G G G+ I GI +
Sbjct: 27 WYGGAKLGWSNFYGVDENNITTLLDEDNDEVGAGAFAGYQINQN---LGIELGYDYLGNY 83
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ S + + LK G+ V L D
Sbjct: 84 KYSGTRSGAAFNDKVEAQLAQLTLKLGFPVAENL-------------DLYGRLGGGYGWA 130
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
++ + + V +G +Y N D + Y+Y S+ D E + +
Sbjct: 131 SSDKLDNDGRFNFVGALGAEYAFNLDWAARLEYQY----------SSPYGDREDTGLRMD 180
Query: 231 AHIASLGINMHF 242
+ ++ + F
Sbjct: 181 NGLLAVAVVYRF 192
>gi|145637084|ref|ZP_01792747.1| Outer membrane protein P5 [Haemophilus influenzae PittHH]
gi|145269738|gb|EDK09678.1| Outer membrane protein P5 [Haemophilus influenzae PittHH]
Length = 358
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 60/206 (29%), Gaps = 34/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G+ + + + N L + + + F +G+ D
Sbjct: 28 FYAGVKAGQGSFHDGINN--NGAIKEDLPGD-------YGYRRNTFTYGVFGGYQILNQD 78
Query: 117 STFYRLKEKYFIYGDVVLK-------------------AGYSV-DSLLIYGMGGFGGAYV 156
+ + Y +G V + Y V D L +YG G
Sbjct: 79 NFGLAAELGYDNFGRVKARQNRKTLAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRS 138
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
E V + ++ K +S + +G +Y V ++++ Y+++
Sbjct: 139 DYKFYEVV--NGTRERKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYR 193
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + GI+ F
Sbjct: 194 PQDKPNTAINYNPWIGSINAGISYRF 219
>gi|269968347|ref|ZP_06182366.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
gi|269827033|gb|EEZ81348.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
Length = 275
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/188 (13%), Positives = 51/188 (27%), Gaps = 36/188 (19%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + L D + G G+ +G++ + G+
Sbjct: 35 YIGGKVG----MTTLDDACYLNSPCDDEAFGAGLHIGYDFTD---IIGLEYGVDFLG--- 84
Query: 118 TFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
G+ A ++D L + ++ S
Sbjct: 85 ---------DYEGNSRSGANTINTIDGNLTALTLAPKFNWHLNDSWNLFAKIGGAYMMSD 135
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
D +G +Y ++ + S+ A Y RY + +A+
Sbjct: 136 -DETDFVPTGSLGAEYSIDRNWSVRAEYQRYQDMSDDVWD-------------DMDANFF 181
Query: 235 SLGINMHF 242
+G+N F
Sbjct: 182 GIGVNYKF 189
>gi|145627861|ref|ZP_01783662.1| Outer membrane protein P5 [Haemophilus influenzae 22.1-21]
gi|144979636|gb|EDJ89295.1| Outer membrane protein P5 [Haemophilus influenzae 22.1-21]
Length = 358
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 62/198 (31%), Gaps = 18/198 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSL------LPNGLGIELGHNIQLEDFVFGINCHT 110
Y G+ + + + K S G+ G+ I L FG+
Sbjct: 28 FYAGVKAGQGSFHDGINNNGAIKEDLSSYYGYKRNTFTYGVFGGYQI-LNQDNFGLAAEL 86
Query: 111 TAAKDDSTFYRLKEK-----YFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKV 164
RL K + LK Y V D L +YG G E
Sbjct: 87 GYDNFGRVKLRLAGKPKVKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRSDYKFYE-- 144
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
E++ +++ K +S + +G +Y V ++++ Y+++
Sbjct: 145 EANGTRDHKKSRHTARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYRPQDKPNTA 201
Query: 225 VDRKGNAHIASLGINMHF 242
++ + GI+ F
Sbjct: 202 INYNPWIGSINAGISYRF 219
>gi|261380183|ref|ZP_05984756.1| surface protein A [Neisseria subflava NJ9703]
gi|284797030|gb|EFC52377.1| surface protein A [Neisseria subflava NJ9703]
Length = 196
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 56/195 (28%), Gaps = 30/195 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSL-LPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
G YV T + D + ++ + G++ DF T K
Sbjct: 24 GFYVQADAGY--STVKIKDNSGEEEFSDKAKGFSPRLSAGYD--FGDFRVA--ADYTHHK 77
Query: 115 D-------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
D + K K+ G + Y ++ + SL E+D
Sbjct: 78 SIERGEYEDDSHLYYKLKFQSIGVSAI---YDFNTNTPVKPYIGARLGINRVSLNSDEAD 134
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ + G+ Y V +++L A YRY +
Sbjct: 135 PGFHYTEHSRKTKMGIGALAGVSYEVTPNVALDAGYRYNYWGNFE-------------ET 181
Query: 228 KGNAHIASLGINMHF 242
K +H S G+ + F
Sbjct: 182 KIQSHEVSAGVRVKF 196
>gi|114776382|ref|ZP_01451427.1| hypothetical protein SPV1_01642 [Mariprofundus ferrooxydans PV-1]
gi|114553212|gb|EAU55610.1| hypothetical protein SPV1_01642 [Mariprofundus ferrooxydans PV-1]
Length = 251
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 55/191 (28%), Gaps = 36/191 (18%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE---DFVFGINCHTTAAK 114
YVGL + +N G +QL G
Sbjct: 91 YVGLGVGA---------------FNLGSGVTKKAVAGGYLQLGDDFSEYLGGEVRIGTTG 135
Query: 115 DDSTFYRL--KEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
L + K +G LK Y D + Y + G + S S+
Sbjct: 136 KSGEELTLQPRMKIEYFGAAYLKPKYQFNDQWMGYALLGIA----------TLRSSYSET 185
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G+G+ Y + + S+ Y ++ N + K++ + ++ A
Sbjct: 186 GLAVQKKTRTGYAYGLGVQYRLADEYSIGLEYSHM-LSKPKTNATAIKTNFQGLE----A 240
Query: 232 HIASLGINMHF 242
SL HF
Sbjct: 241 SSLSLSAKYHF 251
>gi|14578660|gb|AAK68937.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + YR++ N D
Sbjct: 14 ADATKTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYRWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|113968601|ref|YP_732394.1| OmpA domain-containing protein [Shewanella sp. MR-4]
gi|114049252|ref|YP_739802.1| OmpA domain-containing protein [Shewanella sp. MR-7]
gi|113883285|gb|ABI37337.1| OmpA domain protein transmembrane region-containing protein
[Shewanella sp. MR-4]
gi|113890694|gb|ABI44745.1| OmpA domain protein transmembrane region-containing protein
[Shewanella sp. MR-7]
Length = 185
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 59/200 (29%), Gaps = 31/200 (15%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
V Q +G YVG L +S G G+ G+N ++
Sbjct: 16 VAGQASAATDNTGFYVGG---------ALNRVTVDAFDDSETGTGFGVYGGYN--FNEW- 63
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
FG+ + A D + K ++ + Y G V L
Sbjct: 64 FGLEANF-FATADLGDSDVDISAGAL-TFTPKFTLQINDMFSAYAKVGVASMAVNVDGLG 121
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
D G G+G++ V +++ SY I + + S +
Sbjct: 122 -----------FDEDFTGFGWTYGVGVNAAVTEHLNVRLSYD-----ITTGDLDADHSYL 165
Query: 223 ERVDRKGNAHIASLGINMHF 242
D + ++G++ F
Sbjct: 166 NMKDIDTDMKQLAIGVHYQF 185
>gi|12382105|gb|AAG53025.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382109|gb|AAG53027.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAAGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|229844879|ref|ZP_04465017.1| outer membrane protein P5 [Haemophilus influenzae 6P18H1]
gi|229812260|gb|EEP47951.1| outer membrane protein P5 [Haemophilus influenzae 6P18H1]
Length = 355
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 59/198 (29%), Gaps = 21/198 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSL-LPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
YVG+ + H + Y G+ G+ + L G+
Sbjct: 28 FYVGVKAGQASFHHDVRANAKENLYAYYRNSFTYGVFGGYQV-LNRNNLGLALELGYDDF 86
Query: 116 DSTFYRLK-------EKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
R + KY +G + LK Y V L +Y G
Sbjct: 87 GRLKGRDRLGHGQKFAKYTNHGTHLSLKGSYEVLEGLDVYAKTGVALVRSDYKFYA---- 142
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ K SV+ G++Y + ++++ Y+ + V + V+
Sbjct: 143 NGVKERNLGTHSLRPSVLFAAGVEYALLPELAIRLEYQ----GVTRVGKLRSSKSVQNST 198
Query: 227 RKGN--AHIASLGINMHF 242
R N + GI+ F
Sbjct: 199 RDYNPWIGSINAGISYRF 216
>gi|14578658|gb|AAK68936.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|129142|sp|P24755|OMPA_SEROD RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|152839|gb|AAA26561.1| outer membrane protein II [Serratia odorifera]
Length = 243
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 16/112 (14%)
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K Y + D L IY G + + N G S + +G++
Sbjct: 1 LAAKLSYPIADDLDIYTRLGGMIWRADSKANYGRTGERLSN-----HDTGVSPLAAVGVE 55
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + Y+++ + D V + + + SLG++ F
Sbjct: 56 YALTKNWATRLDYQFV----------SNIGDAGTVGARPDNTMLSLGVSYRF 97
>gi|119776560|ref|YP_929300.1| outer membrane protein [Shewanella amazonensis SB2B]
gi|119769060|gb|ABM01631.1| outer membrane protein, putative [Shewanella amazonensis SB2B]
Length = 181
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 56/177 (31%), Gaps = 24/177 (13%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y G ++ L D I + GLG G+N FG+
Sbjct: 26 GFYAGGYV----SNTNLDDKIGPFDES---AWGLGAYGGYNFNDS---FGLETSVFGTDS 75
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
L+ + ++ +S D++ +Y GG + + +
Sbjct: 76 FIDGVDLQV-VGLTFAPTVRHAFS-DTVTVYLKGGVVYQVI------------ASDDSLD 121
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
D G+ +LG G+D + ++++ Y + +N ++ H
Sbjct: 122 DDYQGTGYLLGAGVDISFSSNLAMRVFYEFSEIEPEHDELNNYFANTRMDHYGVGLH 178
>gi|154707240|ref|YP_001425106.1| outer membrane protein [Coxiella burnetii Dugway 5J108-111]
gi|161349309|ref|ZP_02096693.1| outer membrane protein [Coxiella burnetii 'MSU Goat Q177']
gi|212218142|ref|YP_002304929.1| outer membrane protein [Coxiella burnetii CbuK_Q154]
gi|154356526|gb|ABS77988.1| outer membrane protein [Coxiella burnetii Dugway 5J108-111]
gi|164601556|gb|EDQ95154.1| outer membrane protein [Coxiella burnetii 'MSU Goat Q177']
gi|212012404|gb|ACJ19784.1| outer membrane protein [Coxiella burnetii CbuK_Q154]
Length = 231
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/208 (12%), Positives = 58/208 (27%), Gaps = 35/208 (16%)
Query: 55 SGNYVGLHISRLYETHPLADTI----------NRKTYNSLLPNGLGIELGHNIQLEDFVF 104
+G Y+ ++ Y T + G +LG+ Q + F
Sbjct: 37 AGVYLEGNLGYAYRPWRKDATTVVGLAKQAGLLGSSSRGNGGFTFGADLGY--QFNQY-F 93
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGGFGGA 154
+ G +K+G + ++ ++G G
Sbjct: 94 AVEGGWFYLPKVKFTTTGVVNGLAAGTYTVKSGMAYAALKGMAPVYENTYVFGKLGVAYT 153
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
Y ++ N A + + G+ Y + S++A Y ++
Sbjct: 154 YNRANAGLPT---NKIPATFGSRSRFWNPLFAAGVQYYFTPNWSVNAQYTFV-------- 202
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + H+ ++G+ F
Sbjct: 203 -PGYRNASSKRFVAPVTHLFTVGLGYKF 229
>gi|14578654|gb|AAK68934.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|226344175|gb|ACO48710.1| OmpA [Escherichia coli]
Length = 153
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 56/171 (32%), Gaps = 26/171 (15%)
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDV-- 132
IN G G G+ Q+ +V G +K + V
Sbjct: 4 FINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMPYKGSVKNGAYKAQGVQL 60
Query: 133 VLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
K GY + D L IY G +D N G+ G S V G++Y
Sbjct: 61 TAKLGYPITDDLDIYTRLG----------GMVWRADTKSNVYGKNHDTGVSPVFAGGVEY 110
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +I+ Y++ +N D + + + + SLG++ F
Sbjct: 111 AITPEIATRLEYQW----------TNNIGDAHTIGTRPDNGMLSLGVSYRF 151
>gi|212213184|ref|YP_002304120.1| outer membrane protein [Coxiella burnetii CbuG_Q212]
gi|212011594|gb|ACJ18975.1| outer membrane protein [Coxiella burnetii CbuG_Q212]
Length = 231
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/208 (12%), Positives = 58/208 (27%), Gaps = 35/208 (16%)
Query: 55 SGNYVGLHISRLYETHPLADTI----------NRKTYNSLLPNGLGIELGHNIQLEDFVF 104
+G Y+ ++ Y T + G +LG+ Q + F
Sbjct: 37 AGVYLEGNLGYAYRPWRKDATTVVGLAKQAGLLGSSSRGNGGFTFGADLGY--QFNQY-F 93
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV----------DSLLIYGMGGFGGA 154
+ G +K+G + ++ ++G G
Sbjct: 94 AVEGGWFYLPKVKFTTTGVVNGLAAGTYTVKSGMAYAALKGMAPVYENTYVFGKLGVAYT 153
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
Y ++ N A + + G+ Y + S++A Y ++
Sbjct: 154 YNRANAGLPT---NKIPATFGSRSRFWNPLFAAGVQYYFTPNWSVNAQYTFV-------- 202
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + H+ ++G+ F
Sbjct: 203 -PGYRNASSKRFVAPVTHLFTVGLGYKF 229
>gi|320577100|gb|ADW54059.1| outer membrane protein A [Sodalis glossinidius]
Length = 220
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 22/159 (13%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSL 143
G G LG+ Q + G + K + K Y + D L
Sbjct: 1 GAGAFLGY--QANPY-LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDL 56
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
IY G ++ + K DN + G S + +GL+Y + + Y
Sbjct: 57 DIYTRLG----GMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDY 112
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ N D V + + + S+G++ F
Sbjct: 113 QWV----------NNIGDAGTVGTRPDNSMLSVGVSHRF 141
>gi|218779627|ref|YP_002430945.1| OmpW family protein [Desulfatibacillum alkenivorans AK-01]
gi|218761011|gb|ACL03477.1| OmpW family protein [Desulfatibacillum alkenivorans AK-01]
Length = 219
Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 61/190 (32%), Gaps = 9/190 (4%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
+GL + + G + + F + TA D+
Sbjct: 33 IGLELGYNQ-ISDTSIPDAPGIDGEFDGAFIFGANADYFFT-DFFSLEMFLGYTATDMDA 90
Query: 118 TFYRLKEK----YFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + + + + + Y DS++ Y G G + + ++ + +
Sbjct: 91 SGFGVSIDVGEVTQVPWTLTARLHYPNDSIVSPYIGAGVGYYFNDFDVSSTMVNNAAPQS 150
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G + + G + V+ +++ +Y ++ N N + D +A
Sbjct: 151 YGIDLENSFGFHVNGGAEVFVDENVAFDLDLKYTWNNADWDENVNGVTITSG-DIDMDAF 209
Query: 233 IASLGINMHF 242
A++G+ +F
Sbjct: 210 TATVGVKYYF 219
>gi|126214994|emb|CAM35532.1| OprG protein [Pseudomonas fluorescens]
Length = 193
Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 54/185 (29%), Gaps = 27/185 (14%)
Query: 75 TINRKTYNSLLPNGLGIELGHN--IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDV 132
+ +LG N L + V GI + +K K G
Sbjct: 10 PLAGANLGGKATMSSDTQLGLNFAYMLTNHV-GIEL----LAATPFEHDVKIKNTALGAA 64
Query: 133 VLKAG-------------YSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
K G Y +D+ Y G ++ D + +
Sbjct: 65 NGKLGTLKHLPPTLSIVYYPLDNKSAFQPYVGAGINYTWIYDEHVGSRAQGAGFSNFKAE 124
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV--NNSNAKSDVERVDRKGNAHIA 234
+ IG DYM+N ++A RYI + NN+ + V+ + +
Sbjct: 125 NSW--GWAAQIGADYMINDKWMINAQARYIDISTKATVDNNALGQGTRAEVNVDVDPMVY 182
Query: 235 SLGIN 239
+GI
Sbjct: 183 MVGIG 187
>gi|226344125|gb|ACO48685.1| OmpA [Escherichia coli]
gi|226344127|gb|ACO48686.1| OmpA [Escherichia coli]
gi|226344129|gb|ACO48687.1| OmpA [Escherichia coli]
gi|226344131|gb|ACO48688.1| OmpA [Escherichia coli]
gi|226344133|gb|ACO48689.1| OmpA [Escherichia coli]
gi|226344135|gb|ACO48690.1| OmpA [Escherichia coli]
gi|226344137|gb|ACO48691.1| OmpA [Escherichia coli]
gi|226344139|gb|ACO48692.1| OmpA [Escherichia coli]
gi|226344141|gb|ACO48693.1| OmpA [Escherichia coli]
gi|226344143|gb|ACO48694.1| OmpA [Escherichia coli]
gi|226344145|gb|ACO48695.1| OmpA [Escherichia coli]
gi|226344147|gb|ACO48696.1| OmpA [Escherichia coli]
gi|226344149|gb|ACO48697.1| OmpA [Escherichia coli]
gi|226344151|gb|ACO48698.1| OmpA [Escherichia coli]
gi|226344153|gb|ACO48699.1| OmpA [Escherichia coli]
gi|226344155|gb|ACO48700.1| OmpA [Escherichia coli]
gi|226344157|gb|ACO48701.1| OmpA [Escherichia coli]
gi|226344159|gb|ACO48702.1| OmpA [Escherichia coli]
gi|226344161|gb|ACO48703.1| OmpA [Escherichia coli]
gi|226344163|gb|ACO48704.1| OmpA [Escherichia coli]
gi|226344165|gb|ACO48705.1| OmpA [Escherichia coli]
gi|226344167|gb|ACO48706.1| OmpA [Escherichia coli]
gi|226344169|gb|ACO48707.1| OmpA [Escherichia coli]
gi|226344171|gb|ACO48708.1| OmpA [Escherichia coli]
gi|226344173|gb|ACO48709.1| OmpA [Escherichia coli]
gi|226344177|gb|ACO48711.1| OmpA [Escherichia coli]
gi|226344179|gb|ACO48712.1| OmpA [Escherichia coli]
gi|226344181|gb|ACO48713.1| OmpA [Escherichia coli]
gi|226344183|gb|ACO48714.1| OmpA [Escherichia coli]
gi|226344185|gb|ACO48715.1| OmpA [Escherichia coli]
gi|226344187|gb|ACO48716.1| OmpA [Escherichia coli]
gi|226344189|gb|ACO48717.1| OmpA [Escherichia coli]
Length = 153
Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 55/172 (31%), Gaps = 28/172 (16%)
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK---DDSTFYRLKEKYFIYGD 131
IN G G G+ Q+ +V G + K
Sbjct: 4 FINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMPYKGSVENGAYKAQGV-Q 59
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K GY + D L IY G +D N G+ G S V G++
Sbjct: 60 LTAKLGYPITDDLDIYTRLG----------GMVWRADTKSNVYGKNHDTGVSPVFAGGVE 109
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + +I+ Y++ +N D + + + + SLG++ F
Sbjct: 110 YAITPEIATRLEYQW----------TNNIGDAHTIGTRPDNGMLSLGVSYRF 151
>gi|14578666|gb|AAK68940.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|37624552|gb|AAQ96072.1| outer membrane protein II [Escherichia coli]
gi|37624556|gb|AAQ96074.1| outer membrane protein II [Escherichia coli]
gi|37624558|gb|AAQ96075.1| outer membrane protein II [Escherichia coli]
gi|37624560|gb|AAQ96076.1| outer membrane protein II [Escherichia coli]
Length = 157
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D N G+ G S V G++Y + +I+ Y++ +N D +
Sbjct: 16 ADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDAHTI 65
Query: 226 DRKGNAHIASLGINMHF 242
+ + + SLG++ F
Sbjct: 66 GTRPDNGMLSLGVSYRF 82
>gi|229846196|ref|ZP_04466308.1| Outer membrane protein P5 [Haemophilus influenzae 7P49H1]
gi|229811200|gb|EEP46917.1| Outer membrane protein P5 [Haemophilus influenzae 7P49H1]
Length = 359
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 62/206 (30%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G+ + + + K +L + + F +G+ D
Sbjct: 28 FYAGVKAGQGSFHDGINNNGAIKNNLALTS--------YGYRRNTFTYGVFGGYQILNQD 79
Query: 117 STFYRLKEKYFIYGDVVLKA-------------------GYSV-DSLLIYGMGGFGGAYV 156
+ + Y +G V L+ Y V D L +YG G
Sbjct: 80 NFGLAAELGYDNFGRVKLRLAGKPQAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRS 139
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
E ++ +++ K +S + +G +Y V ++++ Y+++
Sbjct: 140 DYKFYEA--ANGTRDHKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYR 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + GI+ F
Sbjct: 195 PQDKPNTAINYNPWIGSINAGISYRF 220
>gi|120601339|ref|YP_965739.1| aromatic hydrocarbon degradation membrane protein [Desulfovibrio
vulgaris DP4]
gi|120561568|gb|ABM27312.1| membrane protein involved in aromatic hydrocarbon degradation
[Desulfovibrio vulgaris DP4]
Length = 401
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 55/186 (29%), Gaps = 26/186 (13%)
Query: 75 TINRKTYNSLLPNGLGIELGHNIQ-LEDFVFG----------INCHTTAAKDDSTFYRLK 123
+ G G+ G Q +D G + T + + L
Sbjct: 174 PLGMDARIKGDSTGFGLNGGMWWQAFDDVALGASFRTPVKQHVKGRATFDNVPAGYGPLF 233
Query: 124 EKYFIYGDVV----LKAGYSVDSLLIYGMGGFG----GAYVIDSSLEKVESDNSKNAKGR 175
GD+ ++ G + G+ + + ++ K A +
Sbjct: 234 RDTDAEGDITLPGEVRFGVYWQATERLGVEVGAMRTFWSSYDELRIDYGSPVGGKPASIK 293
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
L G +Y + ++ L A Y Y VN+++ V + H+ S
Sbjct: 294 QTEWEDVWRLSAGAEYRLTDNVDLRAGYVY---DEEPVNSAHLDFMVPA----NDRHLMS 346
Query: 236 LGINMH 241
LG+ H
Sbjct: 347 LGVGYH 352
>gi|239832777|ref|ZP_04681106.1| adhesin precursor [Ochrobactrum intermedium LMG 3301]
gi|239825044|gb|EEQ96612.1| adhesin precursor [Ochrobactrum intermedium LMG 3301]
Length = 292
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 52/218 (23%), Gaps = 35/218 (16%)
Query: 56 GNYVGLHISRLYETHPLAD--TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
G Y+ I AD TI+ G + F+ G
Sbjct: 57 GWYLRGDIGYSKAKFKDADYATIDNCDTCGSGSPTFGSNTLYGDLKGSFLVGGGVGYQVT 116
Query: 114 KDDSTF------YRLKEKYFIYGDV-----------VLKAGYS------------VDSLL 144
T R K YG +
Sbjct: 117 DYFRTDLTVDYMTRAKFDGHTYGSACNGDINCASDERGRFSALSILANAYVDLGNFAGFT 176
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G GG V ++ + + L G + +++ L A YR
Sbjct: 177 PYVGAGIGGTRVK---WGDLDDVRYGGTQEGAANWRFTYALMAGASVDLTHNLKLDAGYR 233
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + N + D+ N H +G+ F
Sbjct: 234 YRHINGGKMFEGNQWIG-DGYDKGMNVHDVRVGLRYMF 270
>gi|239950057|gb|ACS36760.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 196
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/98 (12%), Positives = 36/98 (36%), Gaps = 6/98 (6%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG G + +S+++G G++Y + +++ Y+
Sbjct: 76 VYGKVGAALVRNDYKRY------FQTXEPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQ 129
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + + ++ + ++H + GI+ F
Sbjct: 130 WLSNVGNFTKAEVKENRRATYNYSPDSHSVTAGISYRF 167
>gi|90409122|ref|ZP_01217243.1| outer membrane protein A [Psychromonas sp. CNPT3]
gi|90309773|gb|EAS37937.1| outer membrane protein A [Psychromonas sp. CNPT3]
Length = 318
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 26/188 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAAKD 115
YVG +S + + + G G+ Q + F + K
Sbjct: 23 AYVGAKLSVNHYQNACQSWAIDCDATDIAG---GFYAGY--QFNKY-FALEAAYLNLGKV 76
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
D+ + + + G + G + +L +Y + A+ +
Sbjct: 77 DAIYPINEAEKNFTGSMQ---GIEISALALYPLSNDFNAFAKAGVFNWQAKSEGGPLTQK 133
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYI-PHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+G S +G+GL Y ++ Y+Y + +NA H++
Sbjct: 134 --DYGLSPTIGLGLSYQISKQWQARLEYQYFANIGSAEIGGANA-------------HLS 178
Query: 235 SLGINMHF 242
SLGI+ F
Sbjct: 179 SLGISYQF 186
>gi|332991681|gb|AEF01736.1| putative outer membrane protein A [Alteromonas sp. SN2]
Length = 192
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 56/188 (29%), Gaps = 26/188 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG YVG + L ++ + L+ + ++V +
Sbjct: 31 SGFYVGGNYGYLRVEGEDDFDDDKDVWQGLVG----------YKFNEWV-AVEGSFIDFG 79
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D + + + D +Y G + +
Sbjct: 80 DYGNDIAGGDTDGYTAAIKGTLPIT-DRFSLYAKAGQLWSETEYNL-----------GGV 127
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
D S+ +G GL Y + + ++A Y ++ A D++ + + + A
Sbjct: 128 SSDYDDESLFVGAGLSYAITKNFLVNAEYTVYD---AELDAEEAVDDIDDTNFETDLKQA 184
Query: 235 SLGINMHF 242
S+G+ F
Sbjct: 185 SIGVEYRF 192
>gi|90577944|ref|ZP_01233755.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90441030|gb|EAS66210.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 352
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 52/161 (32%), Gaps = 22/161 (13%)
Query: 57 NYVGLHISRL-YETHPLADTINRKTYNSLLP-----NGLGIELGHNIQLEDFVFGINCHT 110
Y G+ + Y + N + G+ +G+N+ + F I
Sbjct: 27 FYAGVRAGGVHYSDFDSKNYANGTYGSGAEGVDRDDFAAGVFMGYNVT--PW-FAIEGGY 83
Query: 111 TAAKDDSTFYRLKEKYFIY----GDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVE 165
T + ++ Y D+V K Y + D + +Y G + L
Sbjct: 84 TWLGEVTSKYDEHHDSGKIEQQAIDLVGKFTYQATDKVDLYTKVGGAWQFTRAKGLPGQT 143
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ + ++ G+G +Y ++S A Y+Y
Sbjct: 144 ATDRDDSLIA--------TAGLGAEYHFTDNLSARAEYQYY 176
>gi|229903102|ref|ZP_04518216.1| Outer membrane protein A precursor [Yersinia pestis Nepal516]
gi|229679844|gb|EEO75946.1| Outer membrane protein A precursor [Yersinia pestis Nepal516]
Length = 205
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 25/59 (42%), Gaps = 10/59 (16%)
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ +G +Y + + Y+++ N D E V + + + S+G++ F
Sbjct: 1 MVALGAEYAWTKNWATRMEYQWV----------NNIGDRETVGARPDNGLLSVGVSYRF 49
>gi|58422899|gb|AAW73249.1| OmpA [Serratia sp. MF 426]
Length = 228
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+++ + G S + +G++Y + + + Y+++ N D
Sbjct: 21 ADSKANFGNGTRLSDHDTGVSPLAAVGVEYALTKNWATRLDYQWV----------NNIGD 70
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 71 AGTVGARPDNGMLSVGVSYRF 91
>gi|145633105|ref|ZP_01788837.1| Outer membrane protein P5 [Haemophilus influenzae 3655]
gi|144986331|gb|EDJ92910.1| Outer membrane protein P5 [Haemophilus influenzae 3655]
Length = 359
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/206 (13%), Positives = 61/206 (29%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G+ + + + K + + + F +G+ D
Sbjct: 28 FYAGVKAGQGSFHDGINNNGAIKEALTS--------ASYGYRRNTFTYGVFGGYQILNQD 79
Query: 117 STFYRLKEKYFIYGDVVLK-------------------AGYSV-DSLLIYGMGGFGGAYV 156
+ + Y +G L+ Y V D L +YG G
Sbjct: 80 NFGLAAELGYDNFGRAKLREVGKPSAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRS 139
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
E E++ ++N +S + +G +Y V ++++ Y+++
Sbjct: 140 DYKRYE--EANGTRNHDKGRHSLRTSGLFSVGAEYAVLPELAVRLEYQWL---TRVGKLR 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ ++GI+ F
Sbjct: 195 TQDKPNSAINYNPWIGSINVGISYRF 220
>gi|14578656|gb|AAK68935.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|323143404|ref|ZP_08078089.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066]
gi|322416809|gb|EFY07458.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066]
Length = 329
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 45/154 (29%), Gaps = 26/154 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG+ D ++ + + G GI G+N L + I
Sbjct: 28 AYVGVRGGWA-----HMDNVDWASADDKDAVGYGIYAGYN--LTSW-AAIEAGYNYFDGF 79
Query: 117 STFYR-LKEKYFIYG-DVVLKAGYSVDS--LLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
S + ++G + L+ + + IY GG A
Sbjct: 80 SAKDVEGSHDFDVHGPEAALRLAFPLGPDGSDIYVRGGAFWATTKVEH------------ 127
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
H + +G G+ Y V + + Y Y
Sbjct: 128 --GISNHEIAPFVGAGVQYAVTKNFGVRVGYDYY 159
>gi|320577064|gb|ADW54041.1| outer membrane protein A [Sodalis glossinidius]
Length = 198
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 49/158 (31%), Gaps = 20/158 (12%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAK--DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLL 144
G G LG+ Q + G K Y + D L
Sbjct: 21 GAGAFLGY--QANPY-LGFELGYDWLGRMAYKGSANNGAFKAQGISPAAKLSYPLTDDLD 77
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
IY G ++ + K DN + G S + +GL+Y + + Y+
Sbjct: 78 IYTRLG----GMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQ 133
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ N D V + + + S+G++ F
Sbjct: 134 WV----------NNIGDAGTVGTRPDNSMLSVGVSYRF 161
>gi|12382063|gb|AAG53004.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|58422897|gb|AAW73248.1| OmpA [Citrobacter freundii]
Length = 222
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D N + G S V G++Y + +I+ Y++ +N D V
Sbjct: 21 ADAKNNDGFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTV 70
Query: 226 DRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 71 GGRPDNGLLSVGVSYRF 87
>gi|89900668|ref|YP_523139.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89345405|gb|ABD69608.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 387
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 59/201 (29%), Gaps = 30/201 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINR---------KTYNSLLPNGLGIELGHNIQLEDFVFGI 106
G Y G ++ R T A + + +G I G+ + F +
Sbjct: 34 GWYAGANVGRSSATIDDARITSGLLGSGLTTTSITDDNRSSGYKIFGGYQF---NRNFAV 90
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLK-AGYSVDSLLI----YGMGGFGGAYVIDSSL 161
+ + G++ LK + L + + G G D++
Sbjct: 91 EGGYFDLGNFGFNANTVPTGTLSGNIKLKGLNLDLVGTLPISEKFSVLGRIGVNYADAAD 150
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ +++ +G+GL Y +++ A +
Sbjct: 151 SFAGTGAVNVLNPSPSKRETNLKVGVGLQYAFTDALAMRAEIERYRINDA---------- 200
Query: 222 VERVDRKGNAHIASLGINMHF 242
V KG+ + SLG+ F
Sbjct: 201 ---VGNKGDIDLVSLGLIYRF 218
>gi|186477368|ref|YP_001858838.1| OmpA domain-containing protein [Burkholderia phymatum STM815]
gi|184193827|gb|ACC71792.1| OmpA domain protein transmembrane region-containing protein
[Burkholderia phymatum STM815]
Length = 170
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 55/188 (29%), Gaps = 50/188 (26%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG YVG + ++ + G+ G+ V G A
Sbjct: 32 SGPYVGAKLG-----VNVSSASGATNKPTHSTIFPGLVAGYGFNAGPVVLGAEL---FAD 83
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
K+ G + K GY + SL+ Y G
Sbjct: 84 LHHGSATFKD-----GGIDAKIGYPIGSLMPYARLGV----------------------- 115
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
D S G+G++YMV ++SL + + + + + N +
Sbjct: 116 TTDWPASRFNYGLGVEYMVMKNLSLFSEWTHDSTDADNTHWRN--------------NSF 161
Query: 235 SLGINMHF 242
++G + F
Sbjct: 162 TIGASYRF 169
>gi|12382045|gb|AAG52995.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|262170812|ref|ZP_06038490.1| outer membrane protein A precursor [Vibrio mimicus MB-451]
gi|261891888|gb|EEY37874.1| outer membrane protein A precursor [Vibrio mimicus MB-451]
Length = 322
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/186 (11%), Positives = 51/186 (27%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + ++ LG Q + + +
Sbjct: 24 YVGGKVGKSWLDDACLANQTCNDDDEVVGAFLG------YQANKW-LSVEAGYDYLGKFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+K + + + + +YG G
Sbjct: 77 AAGLADDKVQAV-TLAPRLSLPLTEAIALYGKVGGAYVDYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S + GL++ N+++++ Y+ +D+ + +A A+L
Sbjct: 117 SKSDYSYLGAAGLEFNTNHNVTMRLEYQ-------------NITDINNDIVRASAETATL 163
Query: 237 GINMHF 242
GI F
Sbjct: 164 GIAYKF 169
>gi|58422903|gb|AAW73251.1| OmpA [Serratia sp. MF 416]
Length = 225
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
Y + + + G G S + +G++Y +N D + Y+++
Sbjct: 10 IYTRLGGMVWRADSDGVGSNGGNHDTGVSPLAAVGVEYALNRDWATRLDYQWV------- 62
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + S+G++ F
Sbjct: 63 ---NNIGDAGTVGARPDNGMLSVGVSYRF 88
>gi|14578694|gb|AAK68954.1| major outer membrane protein [Brenneria lupinicola]
Length = 146
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 10/89 (11%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
Y + + G S + +GL+Y V + + Y+++
Sbjct: 3 VYTRLGGFFWRADSHDDVTGRSGNDTGISPLAAVGLEYAVTKNWATRLDYQWV------- 55
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + S+G++ F
Sbjct: 56 ---NNIGDAGTVGGRPDNGMLSVGVSYRF 81
>gi|86748434|ref|YP_484930.1| hypothetical protein RPB_1309 [Rhodopseudomonas palustris HaA2]
gi|86571462|gb|ABD06019.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 266
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 63/222 (28%), Gaps = 36/222 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNS-------LLPNGLGIEL-GHNIQLEDF----V 103
G Y+ I + Y+ + GI G Q ++ V
Sbjct: 29 GWYLRGDIGFSNQQVKDLRYGRESAYSQLTSFDQQTSFDAAGIFGVGVGYQFNNWFRADV 88
Query: 104 FG---INCHTTAAK--DDSTFYRLKEKYFIYGDVVLKA-----GY----SVDSLLIYGMG 149
G N + + YG + GY + + +
Sbjct: 89 VGQYRGNSNFKGTDRFTGTAGGVAYNGIDNYGASKSEWLVMANGYVDLGTWWCVTPFIGA 148
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRF------DGHGSSVVLGIGLDYMVNYDISLSASY 203
G G A V ++ +N + F + + GL Y VN +++L +Y
Sbjct: 149 GVGAARVTMANFTDTGINNLPFSTTSFASAPTASKWNLAWAVHTGLAYKVNPNLTLELAY 208
Query: 204 RYIPHHIHSVNNSNAKSDVERVD----RKGNAHIASLGINMH 241
Y+ +A + + + +H +G+ +
Sbjct: 209 SYLNLGDGYTGALSAFTGATTNNSFKFKDITSHDVKVGVRWN 250
>gi|12382061|gb|AAG53003.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382065|gb|AAG53005.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382069|gb|AAG53007.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382077|gb|AAG53011.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382083|gb|AAG53014.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382085|gb|AAG53015.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382091|gb|AAG53018.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382097|gb|AAG53021.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|46581493|ref|YP_012301.1| OMPP1/FadL/TodX family outer membrane protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|46450915|gb|AAS97561.1| outer membrane protein, OMPP1/FadL/TodX family [Desulfovibrio
vulgaris str. Hildenborough]
gi|311235142|gb|ADP87996.1| membrane protein involved in aromatic hydrocarbon degradation
[Desulfovibrio vulgaris RCH1]
Length = 401
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 55/186 (29%), Gaps = 26/186 (13%)
Query: 75 TINRKTYNSLLPNGLGIELGHNIQ-LEDFVFG----------INCHTTAAKDDSTFYRLK 123
+ G G+ G Q ED G + T + + L
Sbjct: 174 PLGMDARIKGDSTGFGLNGGMWWQAFEDIALGASFRTPVKQHVKGRATFDNVPAGYGPLF 233
Query: 124 EKYFIYGDVV----LKAGYSVDSLLIYGMGGFG----GAYVIDSSLEKVESDNSKNAKGR 175
GD+ ++ G + G+ + + ++ K A +
Sbjct: 234 RDTDAEGDITLPGEVRFGVYWQATERLGVEVGAMRTFWSSYDELRIDYGSPVGGKPASIK 293
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
L G +Y + ++ L A Y Y VN+++ V + H+ S
Sbjct: 294 QTEWEDVWRLSAGAEYRLTDNVDLRAGYVY---DEEPVNSAHLDFMVPA----NDRHLMS 346
Query: 236 LGINMH 241
LG+ H
Sbjct: 347 LGVGYH 352
>gi|150397818|ref|YP_001328285.1| putative heat resistant agglutinin 1 signal peptide protein
[Sinorhizobium medicae WSM419]
gi|150029333|gb|ABR61450.1| putative heat resistant agglutinin 1 signal peptide protein
[Sinorhizobium medicae WSM419]
Length = 265
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 60/261 (22%), Gaps = 47/261 (18%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+ P + A D D + + + ++ G G Y+ I
Sbjct: 14 AGLSAPFFAQAAD------EDFLDAPEITISSEEAAGG---GLYLRGDIGYAAWLDEGDP 64
Query: 75 TINRKTYNSLLPNGL------GIELGHNIQLEDFVFG------INCHTTAAKD------- 115
++ + +G Q D +
Sbjct: 65 YYRSPGSGNVAFDNARFEEPASATIGLGYQFTDVIRADLTAEYFEGRFDGTSLSAPPCAG 124
Query: 116 DSTFYRLKEKYFIYGDVVLKA--GY----SVDSLLIYGMGGFGGAYVIDSSL-------- 161
+ + + GY ++ Y G G + +
Sbjct: 125 EGAGTGCAFSHRANFSALGLMANGYVDLATLAGFTPYLGAGIGATRIDWKTAHETSSCVG 184
Query: 162 --EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + G D + L G+ Y V + A YRY +
Sbjct: 185 PGGACSGNAGGASYGGRDSWRFTYALMAGVSYDVTDRLKFDAGYRYSQISDGDMF---GS 241
Query: 220 SDVERVDRKGNAHIASLGINM 240
D + D + H +G+
Sbjct: 242 GDAQGYDDGLSRHEFRVGLRF 262
>gi|90425586|ref|YP_533956.1| hypothetical protein RPC_4111 [Rhodopseudomonas palustris BisB18]
gi|90107600|gb|ABD89637.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 274
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 63/219 (28%), Gaps = 35/219 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRK----TYNSLLPNGLGIELGHNIQLEDF----VFG-- 105
G Y+ I + DT + S G+ +G+ Q ++ V G
Sbjct: 45 GWYLRGDIGMTNQDLKFKDTGTASYEDRGFESSSSALFGLGVGY--QFNNWFRADVTGQY 102
Query: 106 -INCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
A + + K + + + + G + + + G G A
Sbjct: 103 RGKATLHGATNIYTSPSQILADNYSGNKSEILVLANAYVDLG-TWWCVTPFVGAGVGMAN 161
Query: 156 VIDSSLEKVESDNSKNA--------KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
V S + + GL Y V +++L +Y Y+
Sbjct: 162 VKISGFRDDGVGYLPGSVPVLSTTYYDDVSKWNFAWAAHAGLAYKVTPNVTLELAYSYVD 221
Query: 208 HHIHS----VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N ++A + ++ LG+ +F
Sbjct: 222 MGSVNMAGWTNYAHASGQSAYQLKNITSNDVKLGVRWNF 260
>gi|126090250|ref|YP_001041705.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125999881|gb|ABN63950.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 333
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 63/187 (33%), Gaps = 32/187 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKD 115
++ + + +++ G+ G +Q + + +
Sbjct: 24 FFIEAKGGYQWASDD------SYKHSNPKGAIFGVSSG--LQFSPAWSWDVGYQY-HDDL 74
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + K + + Y D+L +YG G + + L + +
Sbjct: 75 KADATSVNVKAGLIESALRYDWYLQDNLSVYGRLGVAYWDMEKTHL----------SSDK 124
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
D G S + +G++Y ++ LSA Y+YI S+ SN K ++H
Sbjct: 125 LDATGLSPLGEVGVNYNFTPNVRLSAGYQYID----SIGESNTG--------KYDSHGFL 172
Query: 236 LGINMHF 242
+G+ F
Sbjct: 173 VGLTYAF 179
>gi|149911217|ref|ZP_01899841.1| putative outer membrane protein OmpA [Moritella sp. PE36]
gi|149805744|gb|EDM65742.1| putative outer membrane protein OmpA [Moritella sp. PE36]
Length = 327
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 49/194 (25%), Gaps = 38/194 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G + + + G+ G+ Q + F + D
Sbjct: 27 FYLGAKLGVNHYQNGCQPWNVSCDKTDEAG---GVYGGY--QFNQY-FALEAAYLHLGDA 80
Query: 117 STFYRLKE-KYFIYGDVVL----KAGYS--VDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
Y + G + G D ++ GG + +
Sbjct: 81 VAVYPVNGLNQTYTGTMQGLELSALGLLPITDRFSLFAKGGVYNWHATND---------- 130
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY-IPHHIHSVNNSNAKSDVERVDRK 228
R G S G+GL Y ++ Y+Y V S+ +
Sbjct: 131 -GPHQRIKESGLSPTAGLGLSYQLSISWQARLEYQYFYELGNEEVGGSHGQLT------- 182
Query: 229 GNAHIASLGINMHF 242
+LGI F
Sbjct: 183 ------TLGIAYQF 190
>gi|170694344|ref|ZP_02885498.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
gi|170140767|gb|EDT08941.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
Length = 172
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 55/200 (27%), Gaps = 50/200 (25%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF 102
++G YVG + + N+ ++N++ P G G+N ++ F
Sbjct: 22 AQAAPQAGASQFAGPYVGFKLGV--NNSDASGAFNKASHNTVFP---GFTAGYNFDVQRF 76
Query: 103 VFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
V G A K+ + K G + + Y GF
Sbjct: 77 VVGAEA---FADLHHGSTTFKD-----AGIDAKFGMPFNQFMPYIRAGF----------- 117
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
G G+G+DY +S A +
Sbjct: 118 ----------TGDDPDTRFHW--GLGVDYKFAEHVSAVAEW--------------TTDSS 151
Query: 223 ERVDRKGNAHIASLGINMHF 242
K + ++G+ HF
Sbjct: 152 HHDGTKRTNNSFTVGVQYHF 171
>gi|288962863|ref|YP_003453157.1| outer membrane protein [Azospirillum sp. B510]
gi|288915129|dbj|BAI76613.1| outer membrane protein [Azospirillum sp. B510]
Length = 347
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 56/203 (27%), Gaps = 36/203 (17%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG----IELGHNIQLE---------DF 102
G YVG + + +G + +G+ + +
Sbjct: 31 GFYVGAGAGVNWTEDADLGSYPAPGLGLKEKFKIGGIGDLSVGYASVMGLRAELEAAWRW 90
Query: 103 VFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDS 159
GI+ ++A + G+++ Y +D + Y G G A V +
Sbjct: 91 RNGIDSTSSATPASNGLGGRTSSVAFMGNLL----YDIDVGLPITPYIGAGAGIAGVKQT 146
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ D + +G Y +N ++L+ YRY
Sbjct: 147 LNGASDRD-----------WVFAYQGIVGASYAINDKVALTLDYRYFATVDPEFELGPVT 195
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
S + H G+ F
Sbjct: 196 SKG-----EYRNHTILAGLRYSF 213
>gi|332701932|ref|ZP_08422020.1| OmpA domain protein transmembrane region-containing protein
[Desulfovibrio africanus str. Walvis Bay]
gi|332552081|gb|EGJ49125.1| OmpA domain protein transmembrane region-containing protein
[Desulfovibrio africanus str. Walvis Bay]
Length = 234
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 50/210 (23%), Gaps = 23/210 (10%)
Query: 56 GNYVGLHISRLYETHPL------ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
G YVG + D + + L P G G + F G
Sbjct: 25 GFYVGGQAGLGALHTYMELEDADNDEQDDQGDWGLGPTGGIFFGGGGAIKDAFYLGGEID 84
Query: 110 TTAAKDDST-FYRLKEKYFIYGDVVLKAG-YSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ ++ G D L+Y M G + + +
Sbjct: 85 AAYHGLSADPTSEETLDLNWSFGARIRIGGVIADDHLLYTMLGLRVGLFEYDNRTGYDYE 144
Query: 168 ---------------NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ N +G+G +Y + + + Y +
Sbjct: 145 FENGCCDCDQDDDDCDDDNWGSEEKPVLGGASVGLGYEYAITDHLGMRTEVGYTFYAPLE 204
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + A+LG+ HF
Sbjct: 205 YEYISGARQYWDESIYPSVLDATLGLVWHF 234
>gi|330448104|ref|ZP_08311752.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492295|dbj|GAA06249.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 352
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 48/164 (29%), Gaps = 26/164 (15%)
Query: 57 NYVGLHISRL---------YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
Y G+ + Y + + + G+ +G+N+ + F I
Sbjct: 27 FYAGVRAGGVHYADFDSKNYAAGTYGNPGSEYRIDRDDFA-AGLFMGYNVT--PW-FAIE 82
Query: 108 CHTTAAK----DDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLE 162
T ++ + D+V K Y + D + +Y G +
Sbjct: 83 GGYTWLGEVTLKGDKYHDQGKVEQQAIDLVGKFTYQATDKVDLYTKVGGAWQFTRSK--- 139
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
D + G+G +Y ++S A Y+Y
Sbjct: 140 ----GLPGQTTTDRDDSLIA-TAGLGAEYHFTDNLSARAEYQYY 178
>gi|68249712|ref|YP_248824.1| outer membrane protein P5 [Haemophilus influenzae 86-028NP]
gi|68057911|gb|AAX88164.1| Outer membrane protein P5 [Haemophilus influenzae 86-028NP]
Length = 359
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 61/206 (29%), Gaps = 33/206 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G+ + H + N N + + F +G+ D
Sbjct: 28 FYAGVKAGQG-SFHDGINNNGAIKQNLSSAN-------YGYRRNTFTYGVFGGYQILNQD 79
Query: 117 STFYRLKEKYFIYGDVVLK-------------------AGYSV-DSLLIYGMGGFGGAYV 156
+ + Y +G V L+ Y V D L +YG G
Sbjct: 80 NFGLAAELGYDNFGRVKLREAGKPKAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRS 139
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
E ++ +++ K +S + +G +Y V ++++ Y+++
Sbjct: 140 DYKFYEV--ANGTRDHKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYR 194
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + GI+ F
Sbjct: 195 PQDKPNTAINYNPWIGSINAGISYRF 220
>gi|27366989|ref|NP_762516.1| outer membrane protein A [Vibrio vulnificus CMCP6]
gi|37676767|ref|NP_937163.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|27358557|gb|AAO07506.1| Outer membrane protein A precursor [Vibrio vulnificus CMCP6]
gi|37201310|dbj|BAC97133.1| outer membrane protein [Vibrio vulnificus YJ016]
Length = 357
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 46/178 (25%), Gaps = 27/178 (15%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVF 104
+ WS Y G I L D + G G+ G+N
Sbjct: 18 FSATANAAWSDLYFGGKIGY----VNLDDACYVSSPCDDDSAGFGLYYGYNFSKHISAEL 73
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK 163
GI+ + S Y + K Y + K ++ L + G D
Sbjct: 74 GIDLLGEHETNFSNGYFSEAKLAAY-TLAPKFSLPLNEKLDAFAKIGAAYMIYGDDKDLV 132
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKS 220
+GL+Y + A Y RY V + +A
Sbjct: 133 PTGS-------------------LGLEYALTESFKARAEYQRYQDMSDDIVKDMDANF 171
>gi|120599910|ref|YP_964484.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|146292153|ref|YP_001182577.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|120560003|gb|ABM25930.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
gi|145563843|gb|ABP74778.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
gi|319425449|gb|ADV53523.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 366
Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 51/182 (28%), Gaps = 17/182 (9%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAA 113
+ YVG + H + Y I G+ D+ FG
Sbjct: 26 TPWYVGAGLGVNNYEHIATQNGDDNPY------AWDIFAGY--MFNDY-FGAEIGYRDLG 76
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D T + + G + G + + G + +S + D
Sbjct: 77 NADWTTSGISNDADVKGATLGLVGLWPLANRWSLSAEAGAMYYTLENS-----QRDTISG 131
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A+ + + G G+ Y ++ L A YR + N A S+ ++
Sbjct: 132 ARSSYSSDDFAPYFGAGIGYNFTDNLKLQAKYRRYENLDDKYNIVEADSNYWGLELSYRF 191
Query: 232 HI 233
Sbjct: 192 GT 193
>gi|319897366|ref|YP_004135562.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3031]
gi|317432871|emb|CBY81237.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3031]
Length = 348
Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 55/193 (28%), Gaps = 18/193 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G+ + + + + G+ G+ I L G+
Sbjct: 28 FYAGVKAGQASFHNGVRAQARKHDAGYHRNSFTYGVFGGYQI-LNQNNLGLAVELGYDDF 86
Query: 116 DSTFYRLKEKYFIYGD-----VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
R + + + LK Y V + L +YG G + +
Sbjct: 87 GRAKGRREGRTVAKHTNHGTHLSLKGSYEVLNGLDVYGKAGVALVRSDYKFYSVDDHKDG 146
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+S + +G +Y V ++++ Y+++ + ++
Sbjct: 147 -------HRVRASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYRPQDNPNSAINYTP 196
Query: 230 NAHIASLGINMHF 242
+ GI+ F
Sbjct: 197 WIGSINAGISYRF 209
>gi|37624542|gb|AAQ96067.1| outer membrane protein II [Enterobacter cloacae]
Length = 158
Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D+S + G G S V G+++ + DI+ Y+++ N D V
Sbjct: 16 ADSSNSIAGDDHDTGVSPVFAGGVEWAMTRDIATRLEYQWV----------NNIGDGNTV 65
Query: 226 DRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 66 GVRPDNGMLSVGVSYRF 82
>gi|91785689|ref|YP_560895.1| hypothetical protein Bxe_A0088 [Burkholderia xenovorans LB400]
gi|91689643|gb|ABE32843.1| hypothetical protein Bxe_A0088 [Burkholderia xenovorans LB400]
Length = 173
Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 53/188 (28%), Gaps = 50/188 (26%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G Y+G + ++ + S G G+N + FV G A
Sbjct: 35 AGPYLGFKVG-----VNSSNASGVISKASHTTVFPGFTAGYNFDVNRFVVGAEA---FAD 86
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
K+ G + K G + +L Y GF G
Sbjct: 87 LHHGSTTCKD-----GGIDAKFGMPFNQVLPYVRIGF---------------------TG 120
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+G++Y IS + + + SN K +
Sbjct: 121 DDPDTRFHW--GLGVEYKFARHISAVGEW--------TTDTSNHDGT------KRTNNSF 164
Query: 235 SLGINMHF 242
++G+ HF
Sbjct: 165 TIGLQYHF 172
>gi|254497374|ref|ZP_05110177.1| hypothetical protein LDG_1620 [Legionella drancourtii LLAP12]
gi|254353427|gb|EET12159.1| hypothetical protein LDG_1620 [Legionella drancourtii LLAP12]
Length = 247
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 61/208 (29%), Gaps = 28/208 (13%)
Query: 55 SGNYVGLHIS-RLYETHPLADTINRKTYNSLL---PNGLGIE----LGHNIQLEDFVFGI 106
SG YVG + A + ++N + GLG+ G++ +
Sbjct: 39 SGLYVGSAVGPEGASFTQSAHVMRPGSFNVVDRAHFAGLGVFGSLFAGYSRVYNRYYLAA 98
Query: 107 NCHTTAAKDD----STFYRLKEKYFIYGDVVLKAGYSV-------DSLLIYGMGGFGGAY 155
+ + + Y + + G S+ D+ L YG G+
Sbjct: 99 EVNANISSLTYKLINDEYVHQTFAKTTFTLKNSEGVSLLPGFFLSDNTLFYGRVGYINGR 158
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ S + + + + G G+ + + ++ Y I +
Sbjct: 159 LKISESDP--------TIRSMTKNRNGIRYGAGVRHDLTEQWTVMMDYSQINYDRVKNRV 210
Query: 216 SNAKSDVER-VDRKGNAHIASLGINMHF 242
V + + N + GI +F
Sbjct: 211 FEPFGGVTKNTKIRANTAQVAFGILYNF 238
>gi|146342780|ref|YP_001207828.1| putative outer surface protein (OMPA-like) heat-resistant
agglutinin 1 [Bradyrhizobium sp. ORS278]
gi|146195586|emb|CAL79613.1| conserved hypothetical protein; putative outer surface protein
(OMPA-like); putative heat-resistant agglutinin 1
[Bradyrhizobium sp. ORS278]
Length = 256
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 51/223 (22%), Gaps = 36/223 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTY-------NSLLPNGLGIEL-GHNIQLEDFVFG-- 105
G Y+ I + Y + + GI G + +
Sbjct: 19 GWYLRGDIGFSNQKVKDVHYTRESAYTPMTSFQQTSDFDAAGIYGVGVGYRFNSWFRADI 78
Query: 106 ---------------INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMG 149
N K + + +
Sbjct: 79 TGQYRGNSNFKATDRFNATAGGVPYSGIDNYTASKSEWLVLANAYVDLGTWWCVTPFIGA 138
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRF------DGHGSSVVLGIGLDYMVNYDISLSASY 203
G GG+ V S+ +N F + GL Y VN ++ L +Y
Sbjct: 139 GVGGSRVTISNFTDTGINNLPFTTASFATAPTSSKWNFAWAAHAGLAYNVNPNLVLELAY 198
Query: 204 RYIPHHIHSVNNSNAKSDVERVDR----KGNAHIASLGINMHF 242
Y+ + + + +H LG+ +F
Sbjct: 199 SYVDLGQGQTGVLSTYTGTTTGNFFKFKDITSHDLKLGVRWNF 241
>gi|329905096|ref|ZP_08274021.1| hypothetical protein IMCC9480_2393 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547723|gb|EGF32502.1| hypothetical protein IMCC9480_2393 [Oxalobacteraceae bacterium
IMCC9480]
Length = 199
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 63/206 (30%), Gaps = 24/206 (11%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
A Q + + G G++ + + + NG ++ + L
Sbjct: 15 AAPQAFAQTAQSRNFEGFSAGINANYAKTRATARFGNQYGSTDDTSTNGS-VQGAYGFAL 73
Query: 100 ED-FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGGAYV 156
D FV G+ D +F + K + ++ GY + + L+YG +
Sbjct: 74 NDKFVMGVGATAGFGDLDAGSFNGVSVKAKDMYSIYVEPGYRMTNTTLVYGKLSYQRMK- 132
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
A +G+G+ M++ + A + + SV
Sbjct: 133 ----------GELSGAGTSTSDTFDGYGIGVGVRSMISNKFYVQAELSELDYGSESVR-- 180
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
++ + + ++G+ F
Sbjct: 181 -------GIEIEPKQTVGTIGVGYKF 199
>gi|14578714|gb|AAK68964.1| major outer membrane protein [Erwinia mallotivora]
Length = 149
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + + + G S + +G++Y + + + Y+++
Sbjct: 4 YTRLGGMVWRADSTQYNNGTRISDHDTGVSPLAAVGVEYALTKNWATRLDYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + SLG++ F
Sbjct: 58 ----NNIGDANTVGTRPDNGMVSLGVSYRF 83
>gi|238752400|ref|ZP_04613878.1| Opacity protein and surface antigens-like protein [Yersinia rohdei
ATCC 43380]
gi|238709441|gb|EEQ01681.1| Opacity protein and surface antigens-like protein [Yersinia rohdei
ATCC 43380]
Length = 227
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 11/111 (9%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + IYG G G A V S + S + +G G+ Y V
Sbjct: 124 LGYDIS---IYGTLGLGLAKVESSGWQGNTSRQ----YTENTQTNLAYSVGAGVSYAVMN 176
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA----SLGINMHF 242
++S+ YRY+ +N + D + AH+ +LG F
Sbjct: 177 NLSIDLGYRYVDMGNVESGYNNFTNARRLQDEQMKAHLISSEFTLGARYLF 227
>gi|189501054|ref|YP_001960524.1| surface antigen msp4 family protein [Chlorobium phaeobacteroides
BS1]
gi|189496495|gb|ACE05043.1| surface antigen msp4 family protein [Chlorobium phaeobacteroides
BS1]
Length = 227
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+ G GGA+ + + D +G +G + LG GL V ++ + A YR
Sbjct: 133 FFLTAGVGGAFYSFDDVGDINDDRY---RGTTNGSTWAYQLGAGLALPVGDNLIVDARYR 189
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + D ++ ++H A +G+ +F
Sbjct: 190 YFDTAEFTTEDDFDAFDDVAMNLDISSHSALVGLRYNF 227
>gi|12382073|gb|AAG53009.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382075|gb|AAG53010.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|14578672|gb|AAK68943.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|320158865|ref|YP_004191243.1| outer membrane protein A [Vibrio vulnificus MO6-24/O]
gi|319934177|gb|ADV89040.1| outer membrane protein A precursor [Vibrio vulnificus MO6-24/O]
Length = 357
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 46/178 (25%), Gaps = 27/178 (15%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVF 104
+ WS Y G I L D + G G+ G+N
Sbjct: 18 FSATANAAWSDLYFGGKIGY----VNLDDACYVSSPCDDDSAGFGLYYGYNFSKHISAEL 73
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK 163
GI+ + S Y + K Y + K ++ L + G D
Sbjct: 74 GIDLLGEHETNFSNGYFSEAKLAAY-TLAPKFSLPLNEKLDAFAKIGAAYMIYGDDKDLV 132
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKS 220
+GL+Y + A Y RY V + +A
Sbjct: 133 PTGS-------------------LGLEYALTESFKARAEYQRYQDMSDDIVKDMDANF 171
>gi|320577124|gb|ADW54071.1| outer membrane protein A [endosymbiont of Columbicola columbae]
Length = 250
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 22/159 (13%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSL 143
G G +GH Q + G + K + K Y + D L
Sbjct: 22 GAGAFVGH--QANQY-LGFELGYDWLGRIAYKGSMNNGSFKAQGI-SLAAKLNYPLTDDL 77
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
IY G ++ + K DN + S + +GL+Y + + Y
Sbjct: 78 DIYTRLG----GMVWRADSKGAYDNGNAGRISDHDTSISPMAAVGLEYSWTKNWATRLDY 133
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ N DV V + + + S+G++ F
Sbjct: 134 QWV----------NNIGDVGTVGTRPDNSVLSVGMSYRF 162
>gi|320577098|gb|ADW54058.1| outer membrane protein A [Sodalis glossinidius]
gi|320577102|gb|ADW54060.1| outer membrane protein A [Sodalis glossinidius]
Length = 207
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 19/143 (13%)
Query: 104 FGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDS 159
G + K + K Y + D L IY G ++
Sbjct: 2 LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWR 56
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ K DN + G S + +GL+Y + + Y+++ N
Sbjct: 57 ADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNI 106
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 107 GDAGTVGTRPDNSMLSVGVSYRF 129
>gi|225025701|ref|ZP_03714893.1| hypothetical protein EIKCOROL_02603 [Eikenella corrodens ATCC
23834]
gi|224941482|gb|EEG22691.1| hypothetical protein EIKCOROL_02603 [Eikenella corrodens ATCC
23834]
Length = 193
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 54/195 (27%), Gaps = 33/195 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YV + + + + G++ +F T K
Sbjct: 24 GFYVQGDLGHASVKGKV-----YGESATAKGFSPRLSAGYD--FGNFRVA--ADYTHYKS 74
Query: 116 DSTFYRLKEKYFI-----YGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESD 167
S R+ + + A Y D + Y G V S + E+
Sbjct: 75 RSESGRISSSTTYDAEAKFQSFGVSAIYDFDLNAPVKPYVGGRVALNRV---SFDTTENG 131
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ V + G+ Y + +I+L A YRY
Sbjct: 132 TGYTEHYHHRETKTGVGIVAGVGYDITQNIALDAGYRYNYWGKFD-------------GV 178
Query: 228 KGNAHIASLGINMHF 242
K ++H S G+ + F
Sbjct: 179 KVDSHEVSAGVRVKF 193
>gi|12382079|gb|AAG53012.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382081|gb|AAG53013.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N N + G S + +G++Y V + + Y+ N D
Sbjct: 14 ADATQTNPTNGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQ----------RVNNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|254227754|ref|ZP_04921185.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262395797|ref|YP_003287650.1| outer membrane protein A precursor [Vibrio sp. Ex25]
gi|151939796|gb|EDN58623.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262339391|gb|ACY53185.1| outer membrane protein A precursor [Vibrio sp. Ex25]
Length = 330
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 50/186 (26%), Gaps = 32/186 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + L D + G G+ +G++ + G+ D
Sbjct: 27 YIGGKVG----MTTLDDACYLNSPCDDEAFGAGLHIGYDFTD---IIGLEYGVDFLGDYK 79
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
++ ++D L + ++ S +
Sbjct: 80 ANFKSGANTVN----------TIDGNLTALTLAPKFNWHLNESWNLFAKIGGAYMMSDDE 129
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+G +Y ++ + S+ A Y RY + +A+ +
Sbjct: 130 KDFV-PTGSLGAEYTIDRNWSVRAEYQRYQDLSDDVWD-------------DMDANFFGI 175
Query: 237 GINMHF 242
G N F
Sbjct: 176 GFNYKF 181
>gi|269959951|ref|ZP_06174328.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835250|gb|EEZ89332.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 326
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 53/191 (27%), Gaps = 42/191 (21%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI-QLEDFVFGINCHTTAAKDD 116
Y+G + L D + G G+ +G++ + +G++ +
Sbjct: 25 YIGGKVG----MTTLDDACYLNSPCDDDAFGAGMHIGYDFTDIIGLEYGVDYLGNYEANF 80
Query: 117 STFYRLKEKYF---IYGDVVLKA-GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + K + D+ ++ G D
Sbjct: 81 KSGANTANTIDGDLWALTLAPKFNWHLNDTWNLFAKVGGAYMISGDEKDIVPTGS----- 135
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+G +Y ++ + S+ A Y RY ++ +A
Sbjct: 136 --------------LGAEYTIDRNWSVRAEYQRYQDISDDVLD-------------DMDA 168
Query: 232 HIASLGINMHF 242
+ +G+N F
Sbjct: 169 NFFGIGVNYKF 179
>gi|54297563|ref|YP_123932.1| hypothetical protein lpp1614 [Legionella pneumophila str. Paris]
gi|53751348|emb|CAH12766.1| hypothetical protein lpp1614 [Legionella pneumophila str. Paris]
Length = 254
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 63/202 (31%), Gaps = 24/202 (11%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGI----ELGHN-IQLEDFVFGINCHTTAAKDDSTF 119
++ + +N ++ +G G+ LG+ + G+ + ++
Sbjct: 52 YNFKRDETSQELNFTDFDHFDWHGSGLGGEIYLGYEKFFRTHYYIGLEGFFNRSSNEGKI 111
Query: 120 Y------------RLKEKYFIYGDVVLKAG-YSVDSLLIYGMGGFGGAYVIDSSLEK-VE 165
Y + K + + G Y +IYG G+ + V S
Sbjct: 112 YFFDSNELYSRILKGSFKQKWQSGLAIHPGIYLPSVGIIYGRVGWIVSDVNLSGSITQSG 171
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-----HHIHSVNNSNAKS 220
S + + + V LG GL+ + + + + +++N +
Sbjct: 172 PFGSFSGRFSNTKKKNGVQLGTGLELELTKNWRCRVEWDWNRLQDFIFDSQGRDSNNHRY 231
Query: 221 DVERVDRKGNAHIASLGINMHF 242
R+ + LG+N F
Sbjct: 232 QTTRIAKHPILEQFKLGLNWRF 253
>gi|322420068|ref|YP_004199291.1| surface antigen msp4 family protein [Geobacter sp. M18]
gi|320126455|gb|ADW14015.1| surface antigen msp4 family protein [Geobacter sp. M18]
Length = 213
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 58/203 (28%), Gaps = 33/203 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTY------NSLLPNGLGIELGHNIQLEDFVFGINCH 109
G Y+ + A + + +G G + F
Sbjct: 28 GPYISGFVGVTIPQTTDATSFDGLGNVFEDRIKFDPGLNVGGTAGFDFGAARF----EGE 83
Query: 110 TTAAKDDSTFYRLKEKYF--IYGDVVLKAGYS--------VDSLLIYGMGGFGGAYVIDS 159
+ + + G V A + + Y GG G A + +
Sbjct: 84 ISYKDLPISSISSGGFSDRVVEGSVDTTAFMANVFIDLHNASPITPYLGGGVGFAALHMN 143
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
V +D D + G GL+ +N +SL +YRY ++
Sbjct: 144 DTFSVTTDY----YADDDQVVFAYQAGGGLEVALNRQLSLDLAYRY---------FGTSQ 190
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ + + H A+LG+ + F
Sbjct: 191 ASFINTEFEVATHNATLGLRLKF 213
>gi|294850941|ref|ZP_06791617.1| heat resistant agglutinin 1 [Brucella sp. NVSL 07-0026]
gi|294821584|gb|EFG38580.1| heat resistant agglutinin 1 [Brucella sp. NVSL 07-0026]
Length = 174
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 4/103 (3%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+ + Y G GG V S L + S S+ + L G + +++ L
Sbjct: 58 LGGVTPYVGAGIGGTRVNWSDLVDITSGFSQEGAAN---WRFTYALMAGASVDLTHNLKL 114
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A YRY + + N +D D+ N H +G+ F
Sbjct: 115 DAGYRYRHVNGGKMFEGNQWTDA-GYDKGLNIHDIRVGLRYMF 156
>gi|14578710|gb|AAK68962.1| major outer membrane protein [Erwinia mallotivora]
Length = 149
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + + + G S + +G++Y + + + Y+++
Sbjct: 4 YTRLGGMVWRADSTQYNNGTRISDHDTGVSPLAAVGVEYALTKNWATRLDYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + SLG++ F
Sbjct: 58 ----NNIGDANTVGTRPDNGMVSLGVSYRF 83
>gi|320577104|gb|ADW54061.1| outer membrane protein A [Sodalis glossinidius]
Length = 188
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 19/143 (13%)
Query: 104 FGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDS 159
G + K + K Y + D L IY G ++
Sbjct: 3 LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWR 57
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ K DN + G S + +GL+Y + + Y+++ N
Sbjct: 58 ADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNI 107
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 108 GDAGTVGTRPDNSMLSVGVSYRF 130
>gi|294671107|ref|ZP_06735962.1| hypothetical protein NEIELOOT_02815 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307215|gb|EFE48458.1| hypothetical protein NEIELOOT_02815 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 193
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 53/195 (27%), Gaps = 33/195 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YV + T D + + P + G++ DF K
Sbjct: 24 GFYVQGDLGH--STIKTKDDGGKGSAKGFSPR---LSAGYD--FGDFRVA--ADYIHYKT 74
Query: 116 -----DSTFYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESD 167
Y K + A Y D + Y G S +
Sbjct: 75 LKEHKRDPLYTFDAKIKFQ-SFGVSAIYDFDLNSPVKPYV--GARLGLNRISYSDDFRGT 131
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ F + V + G+ Y + +++L A YRY
Sbjct: 132 TGYHETESFRKTKAGVGVMAGVGYDITQNVALDAGYRYNHWGKFD-------------GL 178
Query: 228 KGNAHIASLGINMHF 242
K ++H S G+ + F
Sbjct: 179 KVHSHEVSAGVRVKF 193
>gi|319776591|ref|YP_004139079.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3047]
gi|317451182|emb|CBY87415.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3047]
Length = 348
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 55/193 (28%), Gaps = 18/193 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G+ + + + + G+ G+ I L G+
Sbjct: 28 FYAGVKAGQASFHNGVRAQARKHDAGYHRNSFTYGVFGGYQI-LNQNNLGLAVELGYDDF 86
Query: 116 DSTFYRLKEKYFIYGD-----VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
R + + + LK Y V + L +YG G + +
Sbjct: 87 GRAKGRREGRTVAKHTNHGTHLSLKGSYEVLNGLDVYGKAGVALVRSDYKFYPVDDHKDG 146
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+S + +G +Y V ++++ Y+++ + ++
Sbjct: 147 -------HRVRASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYRPQDNPNSAINYTP 196
Query: 230 NAHIASLGINMHF 242
+ GI+ F
Sbjct: 197 WIGSINAGISYRF 209
>gi|240950190|ref|ZP_04754477.1| hypothetical protein AM305_03048 [Actinobacillus minor NM305]
gi|240295277|gb|EER46063.1| hypothetical protein AM305_03048 [Actinobacillus minor NM305]
Length = 205
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 48/161 (29%), Gaps = 16/161 (9%)
Query: 55 SGNYVGLHI-------SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGI 106
+G Y+G I S Y + + +G+ G+ + +FV +
Sbjct: 25 TGGYLGGTITSVKQEFSVPYSELGYQTYEGKYIADGSRGTRVGVTAGYGFDIGSNFVGQL 84
Query: 107 NCHTTAAKDDSTFYRLK--EKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEK 163
+ +T + K + GY + + L Y V SS +
Sbjct: 85 EGELAFSNTKTTNKLGEIITKERFATNASAILGYRVLGNFLPYVKA-----SVNASSFDF 139
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
ES + G GL Y V + L Y+
Sbjct: 140 NESATGFERVDFENSAAFGFGFGAGLKYAVTEKLDLGVEYQ 180
>gi|12382093|gb|AAG53019.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|85860262|ref|YP_462464.1| ompA-like protein [Syntrophus aciditrophicus SB]
gi|85723353|gb|ABC78296.1| ompA-like protein [Syntrophus aciditrophicus SB]
Length = 264
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 60/209 (28%), Gaps = 33/209 (15%)
Query: 56 GNYVGLHISRL------YETHPLADTINRKTYNSLLPNGLGIELGHNI-QLEDFVFGINC 108
G Y+G+ + D LG++ G+ QL F +
Sbjct: 67 GPYIGVFGGLAIPDDLRWGWGDYYDDWGYDEDPD-ESWALGVKFGYIFPQLSYMAFELEY 125
Query: 109 ------HTTAAKDDSTFYRLKEKYFIYGDVVLK-------AGYSVDSLLIYGMGGFGGAY 155
+ GD Y + Y G G +
Sbjct: 126 TCLGDQDYGQTWSYRRSNGDQVIDSYDGDFSAHNVMANLLFRYPYGRVHPYVGFGLGLSM 185
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI--GLDYMVNYDISLSASYRYIPHHIHSV 213
+ E + D ++ G+++ + ++S +Y+Y
Sbjct: 186 GNITEKGTREVNGQLYDSYDIDEDDAAFATQFILGVNFEIAPNLSAELAYKYF------- 238
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ D+ D + H+ +LG+N+HF
Sbjct: 239 ---YSEYDIINYDIEAEDHLFTLGLNVHF 264
>gi|297539083|ref|YP_003674852.1| OmpA domain-containing protein transmembrane region-containing
protein [Methylotenera sp. 301]
gi|297258430|gb|ADI30275.1| OmpA domain protein transmembrane region-containing protein
[Methylotenera sp. 301]
Length = 187
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 22/175 (12%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y G ++ + ++ + GI LG+ + G+ T
Sbjct: 28 GFYAGGNVGVGKPNINTPNGEDKSSS-----AVGGIVLGYKF---NKYLGVEGEYTGIGK 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSV--DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ K + G+ D +YG G SS +
Sbjct: 80 VTDKVSGTAKGD--AASIAAIGFLPLNDEFNLYGKLGVAATKTKVSSSLAPMN------- 130
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
D +SV G+G +Y VN +I + + + + V NS V
Sbjct: 131 ---DDTRTSVTYGLGGEYNVNKNIGIRLGWDHYSAAVKDVTNSKDNFGANVVSVG 182
>gi|14578722|gb|AAK68968.1| major outer membrane protein [Pectobacterium cypripedii]
Length = 148
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + N+ + G S + +G++Y V + + Y+++
Sbjct: 4 YTRLGGMVWRADSTQNANGTRISDHDTGVSPLAALGVEYAVTKNWATRLDYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + S+G++ F
Sbjct: 58 ----NNIGDAGTVGARPDNSMLSVGVSYRF 83
>gi|330953138|gb|EGH53398.1| outer membrane protein W [Pseudomonas syringae Cit 7]
Length = 228
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D+ L D + D + +G+DYM+ ++ L+A
Sbjct: 128 KFQPYAGVGINYTTFFDTDLTGNRKDQGFSNLKLKDS--VGLAAQLGMDYMITDNVLLNA 185
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAH--IASLGINMHF 242
S Y+ + + + V + + + +G+ F
Sbjct: 186 SVWYVDIDTKATVDGPSALAVGKTKVDVDIDPWVYMVGVGYKF 228
>gi|37624544|gb|AAQ96068.1| outer membrane protein II [Enterobacter cloacae]
gi|37624546|gb|AAQ96069.1| outer membrane protein II [Enterobacter cloacae]
gi|37624548|gb|AAQ96070.1| outer membrane protein II [Enterobacter cloacae]
gi|37624550|gb|AAQ96071.1| outer membrane protein II [Enterobacter cloacae]
Length = 158
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D+S + G G S V G+++ + DI+ Y+++ N D V
Sbjct: 16 ADSSNSIAGDDHDTGVSPVFAGGVEWAMTRDIATRLEYQWV----------NNIGDGNTV 65
Query: 226 DRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 66 GVRPDNGMLSVGVSYRF 82
>gi|304394497|ref|ZP_07376418.1| putative heat resistant agglutinin 1 protein [Ahrensia sp. R2A130]
gi|303293407|gb|EFL87786.1| putative heat resistant agglutinin 1 protein [Ahrensia sp. R2A130]
Length = 285
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 7/96 (7%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y + ++ G D + L G Y + +++ L Y
Sbjct: 194 PYDAANYAANGNQTTTYNSRT-------TGGADSWRFAWALHAGTSYDLTHNMKLDVGYT 246
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
Y + + + V D+ ++H+ G+
Sbjct: 247 YSRIEAGDMFKWDNGTGVRGHDKGIDSHVIRAGLRY 282
>gi|148359179|ref|YP_001250386.1| hypothetical protein LPC_1073 [Legionella pneumophila str. Corby]
gi|296107223|ref|YP_003618923.1| hypothetical protein lpa_02373 [Legionella pneumophila 2300/99
Alcoy]
gi|148280952|gb|ABQ55040.1| hypothetical protein LPC_1073 [Legionella pneumophila str. Corby]
gi|295649124|gb|ADG24971.1| hypothetical protein lpa_02373 [Legionella pneumophila 2300/99
Alcoy]
Length = 254
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 65/202 (32%), Gaps = 24/202 (11%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGI----ELGHN-IQLEDFVFGINCHTTAAKDDSTF 119
++ + + +N ++ +G G+ LGH + FG+ + ++
Sbjct: 52 YNFKRNETSQELNFTDFDHFDWHGSGLGGEIYLGHEKFFRTHYYFGLEGFFNRSSNEGKI 111
Query: 120 Y------------RLKEKYFIYGDVVLKAG-YSVDSLLIYGMGGFGGAYVIDSSLEK-VE 165
Y + K + + G Y +IYG G+ + V S
Sbjct: 112 YFFDSNELYSRILKGSFKQKWQSGLAIHPGIYLPSVGIIYGRVGWIISDVNLSGSITQSG 171
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-----HHIHSVNNSNAKS 220
S + + + V LG GL+ + + + + +++N +
Sbjct: 172 PLGSFSGRFSNTKKKNGVQLGTGLELELTQNWRCRVEWDWNRLQDFTFDTQGKDSNNHRY 231
Query: 221 DVERVDRKGNAHIASLGINMHF 242
R+ + LG+N F
Sbjct: 232 QTTRIAKHPILEQFKLGLNWRF 253
>gi|12382101|gb|AAG53023.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382103|gb|AAG53024.1| major outer membrane protein OmpA [Erwinia amylovora]
gi|12382107|gb|AAG53026.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARSDNSMLSVGVSYRF 84
>gi|302189338|ref|ZP_07266011.1| outer membrane protein W [Pseudomonas syringae pv. syringae 642]
gi|330969752|gb|EGH69818.1| outer membrane protein W [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 228
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D+ L D + D + +G+DYM+ ++ L+A
Sbjct: 128 KFQPYAGVGINYTTFFDTDLTGNRKDQGFSNLKLKDS--VGLAAQLGMDYMITDNVLLNA 185
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAH--IASLGINMHF 242
S Y+ + + + V + + + +G+ F
Sbjct: 186 SVWYVDIDTKATVDGPSALAVGKTKVDVDIDPWVYMVGVGYKF 228
>gi|37624554|gb|AAQ96073.1| outer membrane protein II [Escherichia coli]
Length = 161
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+++ A + G S V G++Y + +I+ Y++ +N D
Sbjct: 16 ADTKANVPGGASFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGD 65
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + + SLG++ F
Sbjct: 66 AHTIGTRPDNGMLSLGVSYRF 86
>gi|158422597|ref|YP_001523889.1| opacity protein [Azorhizobium caulinodans ORS 571]
gi|158329486|dbj|BAF86971.1| opacity protein [Azorhizobium caulinodans ORS 571]
Length = 236
Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 57/232 (24%), Gaps = 19/232 (8%)
Query: 18 VVPNHSLAVDLYLPRKIDLFN----EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
V + A D LPR + + + Y+ + +A
Sbjct: 16 VACGGAHAADDALPRLGRSGDFSLALPTLDDDGPATAGTTAGQWYLRTNFGVGGVQGSVA 75
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVV 133
R + G+ +G+ ++ G + + L G V+
Sbjct: 76 GAT-RANSGTDTARTFGVGVGYR--FLPWLRG-DITADYMLALTADRPLGVNSLHTGAVM 131
Query: 134 LKAG---YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+++ ++ Y GG G G + G+
Sbjct: 132 ANLYWDMFTIANITPYVGGGVGFGMANVRFKPFFAPAGWGQ-----TDVGFAWNATAGVA 186
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D SL SYRY H +G+ F
Sbjct: 187 WSFAQDWSLDVSYRYAAMGTQEFTTYTGVPYSID---DMATHQLRIGLRRTF 235
>gi|115526160|ref|YP_783071.1| hypothetical protein RPE_4166 [Rhodopseudomonas palustris BisA53]
gi|115520107|gb|ABJ08091.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 277
Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 58/218 (26%), Gaps = 32/218 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSL-------LPNGLGIEL-GHNIQLEDF----V 103
G Y+ I + + Y + + GI G Q ++ V
Sbjct: 45 GWYLRGDIGFSNQKVKELRNVEPALYPAGLALTQEASFDTAGIYGLGVGYQFNNWFRADV 104
Query: 104 FG---INCHTTAAKDDSTFYR------LKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGG 153
G N + + K + + + G G
Sbjct: 105 IGQYRGNSNFKGLDTFTLGANTGYNLYGGSKSEWLAMANAYVDLGTWWCITPFIGAGVGA 164
Query: 154 AYVIDSSLEKVESDNSKNAK----GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
A V ++ + ++ + GL Y V+ ++L +Y Y+
Sbjct: 165 ARVTVANFTDIGQYSAGAPSWVSAATASKWNFAWAAHAGLAYKVSPGLTLELAYSYLNLG 224
Query: 210 I------HSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
N +N ++ + +H LG+ +
Sbjct: 225 DGFTGDAVPYNGANLYANNPYKFKDITSHDLKLGVRWN 262
>gi|14578668|gb|AAK68941.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRINNHDTGVSPLAAVGIEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|14578712|gb|AAK68963.1| major outer membrane protein [Erwinia mallotivora]
Length = 149
Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + N+ + G S + +G++Y + + + Y+++
Sbjct: 4 YTRLGGMVWSADSTQNNNGTRISDHDTGVSPLAAVGVEYALTKNWATRLDYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D + + + SLG++ F
Sbjct: 58 ----NNIGDANTEGTRPDNGMVSLGVSYRF 83
>gi|12382087|gb|AAG53016.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 10/78 (12%)
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
N N + G + +G++Y V + + Y+ N D
Sbjct: 17 TQTNPTNGRISNHDTGVYPLAAVGVEYAVTKNWATRLDYQ----------GVNNIGDAGP 66
Query: 225 VDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 67 VGARPDNFMLSVGVSYRF 84
>gi|1171900|sp|P45996|OMP53_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; AltName:
Full=Fimbrin; Flags: Precursor
gi|305373|gb|AAA24959.1| fimbrial protein [Haemophilus influenzae]
Length = 359
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 61/199 (30%), Gaps = 19/199 (9%)
Query: 57 NYVGLHISRLYETHPLADTI----NRKTYNSL---LPNGLGIELGHNIQLEDFVFGINCH 109
Y G+ + + + + N G+ G+ I L FG+
Sbjct: 28 FYAGVKAGQGSFHDGINNNGAIKKGLSSSNYGYRRNTFTYGVFGGYQI-LNQDNFGLAAE 86
Query: 110 TTAAKDDSTFYRLKEK-----YFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEK 163
R K + LK Y V D L +YG G E
Sbjct: 87 LGYDDFGRAKLREAGKPKAKHTNHGAYLSLKGSYEVLDGLDVYGKAGVALVRSDYKFYE- 145
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+++ +++ K +S + +G +Y V ++++ Y+++
Sbjct: 146 -DANGTRDHKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYRPQDKPNT 201
Query: 224 RVDRKGNAHIASLGINMHF 242
++ + GI+ F
Sbjct: 202 AINYNPWIGCINAGISYRF 220
>gi|241761570|ref|ZP_04759657.1| hypothetical protein ZmobDRAFT_0734 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241373878|gb|EER63411.1| hypothetical protein ZmobDRAFT_0734 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 204
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 17/139 (12%)
Query: 88 GLGIELGHNIQLE-DFVFGINCHT------------TAAKDDSTFYRLKEKYFIYGDVVL 134
G G G + Q+ FV G + + K F D +
Sbjct: 55 GYGGTAGIDGQIGKYFVVGAEGTYWNPSKMWGDNNGNNMATNGNGGSVSTKAFQEWDASI 114
Query: 135 KAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ G+ + +L+Y +GG+ + R G +G G++Y +
Sbjct: 115 RMGFLAQPDILLYAVGGYATTRERTLYTGVG---GTGVGGYRNVGWSDGYSVGGGVEYSI 171
Query: 194 NYDISLSASYRYIPHHIHS 212
+ ++A YRY H+
Sbjct: 172 SKMFFMNAQYRYSQFSNHT 190
>gi|54302322|ref|YP_132315.1| outer membrane protein OmpA [Photobacterium profundum SS9]
gi|46915744|emb|CAG22515.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
SS9]
Length = 324
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 47/152 (30%), Gaps = 18/152 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + + D +R + G G LG+N + + F + T +
Sbjct: 26 WYAGARVGGTSYSGLSID--SRSSDIDKEDWGGGAFLGYN--IVPW-FAVEGGYTYLGEM 80
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
D+V K ++V + + ++ G + S D
Sbjct: 81 DFKADDASIEQQGLDLVGKFTWNVTNSIDLFAKAGGFYYFTDGSGAISGSDDGIIG---- 136
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G+G +Y N ++S Y+Y
Sbjct: 137 --------TAGVGAEYFFNKNLSARLEYQYYN 160
>gi|12382071|gb|AAG53008.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|296536326|ref|ZP_06898436.1| outer membrane protein [Roseomonas cervicalis ATCC 49957]
gi|296263348|gb|EFH09863.1| outer membrane protein [Roseomonas cervicalis ATCC 49957]
Length = 368
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 58/214 (27%), Gaps = 27/214 (12%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPN-----------GLGIELGHNIQLEDFV 103
+G YVG Y G G L + +
Sbjct: 25 TGVYVGAGAGYNYLQDADITASGATQSMGTARGATRKLSAEFEHGFGGVLSVGYGFGNGL 84
Query: 104 FG-INCHTTAAKDDSTFYRLKEKYFIYGDVV-----LKAGYSVD---SLLIYGMGGFGGA 154
+ + D+ I G V + A Y + ++ Y G G
Sbjct: 85 RAELEGNYRQNDVDTLKAGGNL-PGIGGTVRSYGAMVNALYDFNLGLPVVPYVGAGVGYV 143
Query: 155 YVIDSSLEKVESDNSKNAKGRFDG-HGSSVVLGIGLDYMVNYDISLSASYRYI-----PH 208
+ ++ S +G ++G ++++A YR++
Sbjct: 144 WSDYDTVRSRGLGRSSVTIDDDNGQFAFQGIVGAAFPIAAVPGLAITAEYRFLGTLDPDF 203
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N + + +VD + H LG+ F
Sbjct: 204 TAVTRNTAGVVTARTKVDSENYNHSVFLGLRYAF 237
>gi|37624534|gb|AAQ96063.1| outer membrane protein II [Citrobacter freundii]
gi|37624536|gb|AAQ96064.1| outer membrane protein II [Citrobacter freundii]
gi|37624538|gb|AAQ96065.1| outer membrane protein II [Citrobacter freundii]
Length = 157
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D N + G S V G++Y + +I+ Y++ +N D V
Sbjct: 16 ADAKNNEGFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTV 65
Query: 226 DRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 66 GGRPDNGLLSVGVSYRF 82
>gi|217971469|ref|YP_002356220.1| OmpA domain-containing protein transmembrane region-containing
protein [Shewanella baltica OS223]
gi|217496604|gb|ACK44797.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS223]
Length = 187
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 27/188 (14%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G YVG + +S GLG G+N ++ FG+ + A
Sbjct: 27 TGFYVGGAL-------NKVTLDGDDVTDSRSGTGLGAYGGYN--FNEW-FGLEANL-FAT 75
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D + + D +Y G V ++
Sbjct: 76 GDLGNKDVDASAGALSFTPKFTAHINDIFSVYAKAGVATMLVK-----------FESNGQ 124
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ D G G G++ V +++ SY ++ N + D +
Sbjct: 125 KLDFTGFGWTYGAGVNAAVTEHLNIRVSY---DVTTGKLDADNNSLGLN--DIDTDIKQF 179
Query: 235 SLGINMHF 242
++G++ F
Sbjct: 180 AVGVHYQF 187
>gi|14578670|gb|AAK68942.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|320577072|gb|ADW54045.1| outer membrane protein A [Sodalis glossinidius]
Length = 167
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 19/143 (13%)
Query: 104 FGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDS 159
G + K + K Y + D L IY G ++
Sbjct: 3 LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWR 57
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ K DN + G S + +GL+Y + + Y+++ N
Sbjct: 58 ADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNI 107
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 108 GDAGTVGTRPDNSMLSVGVSYRF 130
>gi|163749836|ref|ZP_02157081.1| outer membrane protein, putative [Shewanella benthica KT99]
gi|161330350|gb|EDQ01329.1| outer membrane protein, putative [Shewanella benthica KT99]
Length = 183
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 30/187 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G + + D I +++ G G+ G+N FGI A
Sbjct: 27 GFYLGGQV----NNTAIEDNIGTFDESAI---GFGVYGGYNFNDS---FGIEASIFATDS 76
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + V++ ++ DS+ Y G V S +
Sbjct: 77 FVDEMDFRM-AAMTISPVVRHAFT-DSVTAYLKAGL-----------VVNRTYSDDDDVD 123
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
G+ + G G+D + ++L Y S + +D+ V
Sbjct: 124 ESYQGTGWLFGAGVDVTLTQSLALRVFYEISETAPESDERDDDFADISLVQYG------- 176
Query: 236 LGINMHF 242
+G++ F
Sbjct: 177 VGLHYRF 183
>gi|197119069|ref|YP_002139496.1| porin [Geobacter bemidjiensis Bem]
gi|197088429|gb|ACH39700.1| porin, putative [Geobacter bemidjiensis Bem]
Length = 209
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 54/197 (27%), Gaps = 30/197 (15%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELG--HNIQLEDFVFGINCHTTAAKDDS 117
G + S ++T +N + G+ +G + D+
Sbjct: 29 GPYFSGFIGVTVPSETHAGGDFNDTVNFDPGLNIGGTAGMDFGTVRLEGEISYKEGNVDT 88
Query: 118 TFYRLK------EKYFIYGDVVLKAGYSV------DSLLIYGMGGFGGAYVIDSSLEKVE 165
++ + + + Y GG G A +
Sbjct: 89 IYFNNSPPPNRFTNTDVSLNATAFMANMFIDLHNNGPITPYLGGGVGFAILNLD------ 142
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
D + + + G GL+ +N +SL YRY +
Sbjct: 143 -DKFGDFYTSDEEVVLAYQAGGGLEVALNRQMSLDLGYRYFRTDEANF---------ADT 192
Query: 226 DRKGNAHIASLGINMHF 242
+ +H A++G+ + F
Sbjct: 193 KMRFESHNATVGLRIKF 209
>gi|296282167|ref|ZP_06860165.1| hypothetical protein CbatJ_01035 [Citromicrobium bathyomarinum
JL354]
Length = 203
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 42/132 (31%), Gaps = 15/132 (11%)
Query: 88 GLGIELGHNIQLEDFV-FGINCHTTAAKDDS----TFYRLKEKYFIYGDVVLKAGY-SVD 141
G G G++I + D V G R ++ + G + D
Sbjct: 73 GGGAMAGYDIAVGDRVRIGAEVSLLKGGGSPETFVGGARYQQNERFGYRATGRIGVVAAD 132
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
L + GGFGG + VE +S V+G G ++ I L
Sbjct: 133 RALFFVKGGFGGDRYAIDNAAGVE---------DAREWRTSFVVGAGAQVRLDERIDLRF 183
Query: 202 SYRYIPHHIHSV 213
Y ++ H+
Sbjct: 184 EYEHLDSSAHAF 195
>gi|37624532|gb|AAQ96062.1| outer membrane protein II [Citrobacter freundii]
gi|37624540|gb|AAQ96066.1| outer membrane protein II [Citrobacter freundii]
Length = 157
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D N + G S V G++Y + +I+ Y++ +N D V
Sbjct: 16 ADAKNNTGFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGDANTV 65
Query: 226 DRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 66 GGRPDNGLLSVGVSYRF 82
>gi|88798412|ref|ZP_01113997.1| OmpA/MotB [Reinekea sp. MED297]
gi|88778852|gb|EAR10042.1| OmpA/MotB [Reinekea sp. MED297]
Length = 373
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 52/202 (25%), Gaps = 6/202 (2%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN 87
+ P + +A+ + + + SG YVG +
Sbjct: 23 VADPELVWKAWDAEEDGPLETADAQFKSGWYVGG--GTGLTEVSPEGSSGGFYVEDDRDW 80
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G + G +G + D ++ + Y
Sbjct: 81 GYKVFAGWRFMSH---WGAEISYVYTGEAGLGNVNPAIADDIADATIRYQIPTMAASYYL 137
Query: 148 MGGFGGAYVIDSS-LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G V L + + S + + LGIG+++ +N A+Y
Sbjct: 138 RGAEHPLDVFGRVGLSAITNSVSDDRIPYEKQTPVQLNLGIGVEWRINETWFARAAYDGF 197
Query: 207 PHHIHSVNNSNAKSDVERVDRK 228
+ + S + D +
Sbjct: 198 DNDASMLAISLGRYFTRHPDHR 219
>gi|12382047|gb|AAG52996.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N +
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGN 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ V + + + S+G++ F
Sbjct: 64 ADTVGARPDNSMLSVGVSYRF 84
>gi|218506306|ref|ZP_03504184.1| probable heat resistant agglutinin 1 protein [Rhizobium etli Brasil
5]
Length = 233
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/220 (11%), Positives = 58/220 (26%), Gaps = 38/220 (17%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+F ++++ ++ + DL I + +G Y+ + +
Sbjct: 5 LSGIFAALLIATNAYSADLAPAEPIPEQPS--------EVAVTEATGWYLRGDVGYAFTD 56
Query: 70 HPLADTINRKTYNSLLPNGLG------IELGHNIQLEDFV-------FGINCHTTAAKDD 116
A N + + I G Q+ ++ + +
Sbjct: 57 LRGARYFQGSNANEVDFDDADLDDAWTIGGGVGYQINSYLRTDLTFDYLTQADFRGSTVG 116
Query: 117 STFYRLK----------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL----- 161
+ L Y + + + G + + Y G GG+YV +L
Sbjct: 117 QCGFPLVDCTSTDRSSLTAYTLLANAYVDLG-TYGYVTPYVGAGIGGSYVKWKNLRNVAC 175
Query: 162 -EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ + + G + L G V +
Sbjct: 176 ADDGSFCDDEVTHGGKGNWRFTYALMAGASVDVTCNFKSR 215
>gi|89056585|ref|YP_512036.1| hypothetical protein Jann_4094 [Jannaschia sp. CCS1]
gi|88866134|gb|ABD57011.1| hypothetical protein Jann_4094 [Jannaschia sp. CCS1]
Length = 245
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/223 (11%), Positives = 57/223 (25%), Gaps = 31/223 (13%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL----LPNGLGIELGHNIQLEDFV 103
++G YVG+ ++ R + + G+ L +V
Sbjct: 18 GHAQDTFTGFYVGVGADTGLHQETSSNLSARVNGADVLDPHATGATNLFAGYTTDLGIWV 77
Query: 104 FGINCHTTAAKDDSTFYRLK----------EKYFIYGDVVLKAGYSV-DSLLIYGMGGFG 152
G + D + + V AG ++ + L++ G
Sbjct: 78 VGGEAELSLFSIDFSEADCRPPLCADAYIIGTRDNAIRVRAIAGQALTEDTLLFATAGLT 137
Query: 153 GAYVIDSSLEKVES-----DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY-- 205
+ + V + + N G +G+G ++ V S +
Sbjct: 138 ASQYTYRGVRAVTNLGMGLGGASNTGPEETGMAYGFNIGVGAEHRVTERFSFRGDVSFER 197
Query: 206 ---------IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ SV + + D G++
Sbjct: 198 VYVTGVTPQLAGSSGSVAGNTVAARAFLTDGSYQMESVRFGVS 240
>gi|329124105|ref|ZP_08252652.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116]
gi|327467530|gb|EGF13028.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116]
Length = 348
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 53/193 (27%), Gaps = 18/193 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G+ + + + G+ G+ I L G+
Sbjct: 28 FYAGVKAGQASFHNGVRAKAREHDAGYHRNSFTYGVFGGYQI-LNQNNLGLAVELGYDDF 86
Query: 116 DSTFYRLKEKYFIYGD-----VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
R + + + LK Y V + L +YG G +
Sbjct: 87 GRAKGRKEGRTVAKHTNHGTHLSLKGSYEVLNGLDVYGKAGVALVRSDYKFYPVDNHKDG 146
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+S + +G +Y V ++++ Y+++ + ++
Sbjct: 147 -------HRVRASGLFAVGAEYAVLPELAVRLEYQWL---TRVGKYRPQDNPNSAINYTP 196
Query: 230 NAHIASLGINMHF 242
+ GI+ F
Sbjct: 197 WIGSINAGISYRF 209
>gi|56552386|ref|YP_163225.1| hypothetical protein ZMO1490 [Zymomonas mobilis subsp. mobilis ZM4]
gi|260753935|ref|YP_003226828.1| outer-membrane immunogenic protein precursor; secreted protein
[Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|56543960|gb|AAV90114.1| hypothetical protein ZMO1490 [Zymomonas mobilis subsp. mobilis ZM4]
gi|258553298|gb|ACV76244.1| putative outer-membrane immunogenic protein precursor; putative
secreted protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 204
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 17/139 (12%)
Query: 88 GLGIELGHNIQLE-DFVFGINC----------HTTAAKDDSTFYRLKEKYFIY--GDVVL 134
G G G + Q+ FV G +T + D +
Sbjct: 55 GYGGTAGIDGQIGKYFVVGAEGTYWNPSKMWGDNNGNNMATTGNGGSVSTKAFQEWDASI 114
Query: 135 KAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ G+ + +L+Y +GG+ + R G +G G++Y +
Sbjct: 115 RMGFLAQPDILLYAVGGYATTRERTLYTGVG---GTGVGGYRNVGWSDGYSVGGGVEYSI 171
Query: 194 NYDISLSASYRYIPHHIHS 212
+ ++A YRY H+
Sbjct: 172 SKMFFMNAQYRYSQFSNHT 190
>gi|145631210|ref|ZP_01786983.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
gi|144983137|gb|EDJ90632.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
Length = 314
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 25/168 (14%)
Query: 95 HNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA------------------ 136
+ + F +G+ D+ + Y +G V L+
Sbjct: 13 YGYRRNTFTYGVFGGYQILNQDNFGLAAELGYDNFGRVKLRLAGKPQAKHTNHGAHLSLK 72
Query: 137 -GYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
Y V D L +YG G E +++ +++ K +S + +G +Y V
Sbjct: 73 GSYEVLDGLDVYGKAGVALVRSDYKFYE--DANGTRDHKKGRHTARASGLFAVGAEYAVL 130
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++++ Y+++ ++ + GI+ F
Sbjct: 131 PELAVRLEYQWL---TRVGKYRPQDKPNTAINYNPWIGSINAGISYRF 175
>gi|14578728|gb|AAK68971.1| major outer membrane protein [Brenneria alni]
Length = 145
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D++ +A + G S + G +Y ++ + + Y+++ N D V
Sbjct: 15 DSNDHAGHSNNDTGVSPLAAAGFEYAIDKNWATRLEYQWV----------NNIGDAATVG 64
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 65 GRPDNGMLSVGVSYRF 80
>gi|37624592|gb|AAQ96092.1| outer membrane protein II [Klebsiella pneumoniae]
Length = 163
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 10/89 (11%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + + G G S V G+++ V DI+ Y+++
Sbjct: 10 GGTSWRAAWNGAHTLATASAGDNHDTGVSPVFAGGVEWAVTRDIATRLEYQWV------- 62
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + S+G++ F
Sbjct: 63 ---NNIGDAGTVGVRPDNGMLSVGVSYRF 88
>gi|14578766|gb|AAK68990.1| major outer membrane protein [Pectobacterium carotovorum]
Length = 145
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D N G+ G S V G++Y++ +I+ Y++ +N D +
Sbjct: 14 ADTKPNVHGKNHDTGVSPVFAGGVEYVITPEIATRLEYQW----------TNNIGDAHTI 63
Query: 226 DRKGNAHIASLGINMHF 242
+ + + SLG++ F
Sbjct: 64 GARPDNGMLSLGVSYRF 80
>gi|320577068|gb|ADW54043.1| outer membrane protein A [Sodalis glossinidius]
Length = 166
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 19/143 (13%)
Query: 104 FGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDS 159
G + K + K Y + D L IY G ++
Sbjct: 2 LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWR 56
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ K DN + G S + +GL+Y + + Y+++ N
Sbjct: 57 ADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNI 106
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 107 GDAGTVGTRPDNSMLSVGVSYRF 129
>gi|218533178|ref|YP_002423994.1| porin opacity type [Methylobacterium chloromethanicum CM4]
gi|218525481|gb|ACK86066.1| porin opacity type [Methylobacterium chloromethanicum CM4]
Length = 285
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/225 (14%), Positives = 62/225 (27%), Gaps = 43/225 (19%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLP-------NGLGIELGHNIQLEDFVFGIN 107
SG Y+ +++ + HP D I + P + G G Q+ + +
Sbjct: 53 SGWYLRGDLTQSWYDHPRDDAILDPNDPGMPPLVGLRLSSETGYGGGVGYQINPW---LR 109
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGD-----------------VVLKAGYSVDSLLIYGMGG 150
T + ++ +R ++ V G + Y G
Sbjct: 110 VDATIDQRAASSFRGYSSRSVFETGYNLEAGKVDVLTGLVNVYADIG-TWYGFTPYVGAG 168
Query: 151 FGGAY-------------VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G A + + + + L GL Y +
Sbjct: 169 VGFADKRMSRNYTQTTCLIDGCDGSAGTGPRNAAFRANHSVMTFAWALTAGLSYDIGAGF 228
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S+ A+YRYI + + + + A +G+ F
Sbjct: 229 SVDAAYRYIDLGR--IRSGLDEFGGLTRVKDLTASEFRIGLRYRF 271
>gi|12382059|gb|AAG53002.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N +
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGN 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|118594667|ref|ZP_01552014.1| hypothetical protein MB2181_03325 [Methylophilales bacterium
HTCC2181]
gi|118440445|gb|EAV47072.1| hypothetical protein MB2181_03325 [Methylophilales bacterium
HTCC2181]
Length = 228
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 46/169 (27%), Gaps = 6/169 (3%)
Query: 79 KTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEKYFIYG----DVV 133
+ N + + +N L + ++ G+ A + + G
Sbjct: 60 TSSNDDSNTNIILGAAYNFALNNNYLLGVGFDYDFADHNIGNPIIDNDPTDNGVNWELSS 119
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ Y L+I + + + G +G G M+
Sbjct: 120 AMSLYLKPQLMITDKSQVYAKLAYIRADVDITEPGAATFVGSDGESIDGYSIGAGYANMI 179
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++SL Y + SN + + + A +GI F
Sbjct: 180 AGNVSLFVEANYFNYGEED-PRSNYTTYTVATPTDIDGYNAKIGIAYTF 227
>gi|301156596|emb|CBW16067.1| outer membrane protein A (3a;II*;G;d) [Haemophilus parainfluenzae
T3T1]
Length = 361
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 51/208 (24%), Gaps = 34/208 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + SL G+N +G+ D
Sbjct: 28 FYVGAKAGLASFHDGIKANTDATNPRSLDFGT-----GYN--RNSVTYGVFGGYQILNRD 80
Query: 117 STFYRLKEKYFIYGDVVLK-------------------AGYSVDSLL-IYGMGGFGGAYV 156
+ ++ Y +G V K Y + L YG G
Sbjct: 81 NLGLAVELGYDDFGRVKFKDAGKTVFKHTNHGTHLSFKGSYGLTEGLDFYGRAGAALVRS 140
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVN 214
++ S V G +Y + +++L Y+++
Sbjct: 141 DYKVYDETTGAREHA--YGRHSLRVSPVFAAGFEYALPSLPELALRLEYQWL---ARVGK 195
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
VD + G++ F
Sbjct: 196 LRTQTGPNSSVDYNPWIGSINAGLSYRF 223
>gi|14578650|gb|AAK68932.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWETRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|254780598|ref|YP_003065011.1| outer membrane protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040275|gb|ACT57071.1| outer membrane protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 205
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 50/158 (31%), Gaps = 30/158 (18%)
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLI 145
G I G+N++ ++G+ + + I G + ++ GY V DSLL+
Sbjct: 76 AGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY-MVNYDISLSASYR 204
Y G V G G+G++ ++ + YR
Sbjct: 135 YATVGP-----------DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR 183
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +G + SLG+ M F
Sbjct: 184 ASKYSK----------------VEGFYNTISLGVGMKF 205
>gi|148980016|ref|ZP_01815837.1| hypothetical protein VSWAT3_06776 [Vibrionales bacterium SWAT-3]
gi|145961459|gb|EDK26763.1| hypothetical protein VSWAT3_06776 [Vibrionales bacterium SWAT-3]
Length = 202
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 59/184 (32%), Gaps = 21/184 (11%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G +I H +DT G + G+ + + GI T D
Sbjct: 39 GSYIGAGLGVHQDSDTDGGGNL-DAESMGYSLYGGYQF---NRIVGIELGYTDY-ADYES 93
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
Y K V GY+ D+ + + + G + +S + D
Sbjct: 94 YGTKVFSPTSLSVAANLGYTFDNSIRPFVLAGLSYVDLNANSSNAFD-----------DD 142
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ G+G++Y +++L + +I ++ + R +LG
Sbjct: 143 SGAGFRFGVGVEYTPVDNLTLRLISQADAVNIEFFDSRGNRL----QSRDVAFSTVTLGA 198
Query: 239 NMHF 242
+ +F
Sbjct: 199 SYNF 202
>gi|187925819|ref|YP_001897461.1| hypothetical protein Bphyt_3849 [Burkholderia phytofirmans PsJN]
gi|187717013|gb|ACD18237.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
Length = 173
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 51/188 (27%), Gaps = 50/188 (26%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G YVG + +D S G G+N ++ FV G A
Sbjct: 35 AGPYVGFKLG-----VNTSDASGVVNKASHTTAFPGFTAGYNFDVDRFVAGAEV---FAD 86
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
K+ G + K G + + Y G +
Sbjct: 87 LHHGSTTYKD-----GGLDAKLGLPFNQFMPYVRIGLTTDWPDIRPHW------------ 129
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+G++Y +S + + + SN + +
Sbjct: 130 -----------GLGVEYKFAKHMSAVGEW--------TTDTSNHDGT------RRTNNSF 164
Query: 235 SLGINMHF 242
++G+ HF
Sbjct: 165 TIGVQYHF 172
>gi|12382067|gb|AAG53006.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGCISNHDTGVSPLAAVGVEYPVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|262404553|ref|ZP_06081108.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262349585|gb|EEY98723.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 321
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + L D +G LG+ Q + I +
Sbjct: 24 YVGGKVGKSW----LDDACQAGQTCDEDDKAIGAFLGY--QANPW-LSIEAGYDYLGKFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
EK Y + + + + +YG G
Sbjct: 77 AAGLADEKVQAY-TLAPRVSLPLTEGIALYGKFGGAFVDYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S + GL++ N ++++ Y+ +D+ + +A A+L
Sbjct: 117 SQEDYSYLGAAGLEFNTNNNVTMRLEYQ-------------NLTDINNDIVRASAESATL 163
Query: 237 GINMHF 242
G+ F
Sbjct: 164 GVVYKF 169
>gi|14578678|gb|AAK68946.1| major outer membrane protein [Erwinia psidii]
gi|14578682|gb|AAK68948.1| major outer membrane protein [Erwinia psidii]
Length = 148
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + N+ + G S + +G++Y + + + Y+++
Sbjct: 4 YTRLGGMVWRADSTRNNNGIRISDHDTGVSPLAAVGVEYALTKNWATRLDYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + SLG++ F
Sbjct: 58 ----NNIGDANTVGTRPDNGMLSLGVSYRF 83
>gi|84385654|ref|ZP_00988685.1| hypothetical protein V12B01_26009 [Vibrio splendidus 12B01]
gi|84379634|gb|EAP96486.1| hypothetical protein V12B01_26009 [Vibrio splendidus 12B01]
Length = 192
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 22/188 (11%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G + + G + G+ + + GI T
Sbjct: 26 GPYIGAGLG-----VYQDSDTDGAGNLDAESMGYSLYGGYQF---NRIVGIELGYTDY-A 76
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D + K V GY+ D+ + + G + S+
Sbjct: 77 DYEKFGTKLLSPTSLSVAANVGYTFDNSIRPFVTAGLSYVDLNSSNSAFYG--------- 127
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
D G+ GIG++Y +++L + +I + N V +
Sbjct: 128 --DDSGAGFHFGIGVEYNPVENLTLRLISQADAVNIENYAYINGN-KVRLSSKDVAFSTV 184
Query: 235 SLGINMHF 242
+LG + +F
Sbjct: 185 TLGASYNF 192
>gi|320577096|gb|ADW54057.1| outer membrane protein A [Sodalis glossinidius]
Length = 173
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 47/150 (31%), Gaps = 20/150 (13%)
Query: 97 IQLEDFVFGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFG 152
Q + G + K + K Y + D L IY G
Sbjct: 1 YQANPY-LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG-- 56
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
++ + K DN + G S + +GL+Y + + Y+++
Sbjct: 57 --GMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV------ 108
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + S+G++ F
Sbjct: 109 ----NNIGDAGTVGTRPDNSMLSVGVSYRF 134
>gi|320577080|gb|ADW54049.1| outer membrane protein A [Sodalis glossinidius]
Length = 174
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 45/143 (31%), Gaps = 19/143 (13%)
Query: 104 FGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDS 159
G + K + K Y + D L IY G ++
Sbjct: 4 LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWR 58
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ K DN + G S + +GL+Y + + YR++ N
Sbjct: 59 ADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYRWV----------NNI 108
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 109 GDAGTVGTRPDNSMLSVGVSYRF 131
>gi|298369428|ref|ZP_06980746.1| hypothetical protein HMPREF9016_01098 [Neisseria sp. oral taxon 014
str. F0314]
gi|298283431|gb|EFI24918.1| hypothetical protein HMPREF9016_01098 [Neisseria sp. oral taxon 014
str. F0314]
Length = 361
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 52/182 (28%), Gaps = 24/182 (13%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD-- 115
YV L + + R G ++G +Q ++ G +
Sbjct: 196 YVFGTAGALRDGASVKRGNRRNKDRDTSAAG---QVGAGVQFNEW-LGGEVYYQGGDKQE 251
Query: 116 -----DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ +++ + YG L AG V ++ G G S
Sbjct: 252 YDAPENLGNEKVEVRNDTYGG-RLTAGTKVAKKARVFAKAGVAGVR-----------HKS 299
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K A + + G+G VN + ++ A Y + + +D V +
Sbjct: 300 KTAGAKDSDTKARATAGVGATVDVNDNWAVRADYDHYFKRNSDEDVKWKGADYLGVGAQY 359
Query: 230 NA 231
Sbjct: 360 KF 361
>gi|319638393|ref|ZP_07993155.1| surface protein A [Neisseria mucosa C102]
gi|317400142|gb|EFV80801.1| surface protein A [Neisseria mucosa C102]
Length = 179
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 49/190 (25%), Gaps = 37/190 (19%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YV + + I G++ DF T K
Sbjct: 24 GFYVQADAGHATVKGDAS----------VKGFSPRISAGYD--FGDFRVA--ADYTHYKS 69
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + Y + A Y D + Y + + N+
Sbjct: 70 EKINTASFDAEGKYHSAGVSAIYDFDLQTPVKPYVGARVAINH-------ASAKVKTANS 122
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ V G+ Y V +++L A YRY + K + H
Sbjct: 123 YYERSDTKTGVGAMAGVSYEVTPNVALDAGYRYNYWGKMN-------------SIKFHTH 169
Query: 233 IASLGINMHF 242
S G+ + F
Sbjct: 170 EVSAGVRVTF 179
>gi|91978375|ref|YP_571034.1| hypothetical protein RPD_3912 [Rhodopseudomonas palustris BisB5]
gi|91684831|gb|ABE41133.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 280
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 64/256 (25%), Gaps = 36/256 (14%)
Query: 22 HSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTY 81
+ A L + Y + G Y+ I + Y
Sbjct: 9 AAGAASLICSAAVAADMPIAPPPAYAPPPVEDFGGWYLRGDIGFSNQQVKDLRYGRESAY 68
Query: 82 NS-------LLPNGLGIEL-GHNIQLEDFV-------FGINCHTTAAKDDSTFYRL--KE 124
+ + GI G Q + + N + +
Sbjct: 69 SQLTSLNQQTSFDAAGIYGVGVGYQFNSWFRADLVGQYRGNSNFKGTDRFTGTANGFPYS 128
Query: 125 KYFIYGDVVLKA-----GY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK----- 170
YG + GY + + + G G A V S+ +
Sbjct: 129 GIDNYGASKSEWLVMANGYVDLGTWWCVTPFVGAGVGAARVTMSNFTDTGVNIIPFSTVS 188
Query: 171 -NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH---IHSVNNSNAKSDVERVD 226
+ + L GL Y VN +++L +Y Y+ S+ + +
Sbjct: 189 YASAPTASKWNLAWALHTGLAYKVNPNLTLELAYSYLNLGDGYTGSLATYDGLTSNNSFK 248
Query: 227 R-KGNAHIASLGINMH 241
+H LG+ +
Sbjct: 249 FKDITSHDVKLGVRWN 264
>gi|14578726|gb|AAK68970.1| major outer membrane protein [Erwinia chrysanthemi]
Length = 147
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D+ ++ G S + +G++Y + + + Y+++ N D V
Sbjct: 14 ADSHDDSGLNDHDTGVSPLAAVGVEYAITKNWATRLDYQWV----------NNIGDASTV 63
Query: 226 DRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 64 GGRPDNGLLSVGVSYRF 80
>gi|71734028|ref|YP_276634.1| OmpW family outer membrane protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257483254|ref|ZP_05637295.1| OmpW family outer membrane protein [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289628404|ref|ZP_06461358.1| outer membrane protein W [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647753|ref|ZP_06479096.1| outer membrane protein W [Pseudomonas syringae pv. aesculi str.
2250]
gi|71554581|gb|AAZ33792.1| outer membrane protein, OmpW family [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322812|gb|EFW78905.1| outer membrane protein W [Pseudomonas syringae pv. glycinea str.
B076]
gi|320330402|gb|EFW86381.1| outer membrane protein W [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330869896|gb|EGH04605.1| outer membrane protein W [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330988232|gb|EGH86335.1| outer membrane protein W [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331012477|gb|EGH92533.1| outer membrane protein W [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 228
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D+ L D + D + +G+DYM+ ++ ++A
Sbjct: 128 KFQPYAGVGINYTTFFDTDLTGNRKDQGFSNLKLKDS--VGLAAQLGMDYMITDNVLVNA 185
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAH--IASLGINMHF 242
S Y+ + + + V + + + +G+ F
Sbjct: 186 SVWYVDIDTKATVDGPSALAVGKTKVDVDIDPWVYMVGVGYKF 228
>gi|320577066|gb|ADW54042.1| outer membrane protein A [Sodalis glossinidius]
Length = 141
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 10/76 (13%)
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
DN + G S + +GL+Y + + Y+++ N D V
Sbjct: 20 DNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNIGDAGTVG 69
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 70 TRPDNSMLSVGVSYRF 85
>gi|320353425|ref|YP_004194764.1| hypothetical protein Despr_1309 [Desulfobulbus propionicus DSM
2032]
gi|320121927|gb|ADW17473.1| hypothetical protein Despr_1309 [Desulfobulbus propionicus DSM
2032]
Length = 250
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 50/179 (27%), Gaps = 12/179 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y L + + L + G G + Q F + A D
Sbjct: 78 WYARLGVRAAWTQQDLGPINEWDSD-----AGFGGAIALGKQFGQFRAELELAYQGADLD 132
Query: 117 S-TFYRLKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
T + V GY D+ +Y M G G A + D
Sbjct: 133 DETAFGYDLGGDYNAKTVFVNGYYEIPVYDAFAVYAMAGLGVAQFDWNVDVSAGLDGPAG 192
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS-NAKSDVERVDRKG 229
G D + + G+G+ Y +I+ Y Y+ S N + V V K
Sbjct: 193 TYGGSD-NAFAYKAGLGMTYNFTDEIAGDLGYEYLGISDAGEAESINGHNVVASVRFKF 250
>gi|14578688|gb|AAK68951.1| major outer membrane protein [Brenneria rubrifaciens]
Length = 147
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ D G S + +G++Y + + ++ Y++I
Sbjct: 4 YTRLGGIVWRADSHAAQSGVDRNNDDTGVSPLAALGIEYAFDKNWAVRVDYQWI------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D V + + S G++ F
Sbjct: 58 ----SNIGDAGTVGARPDNMFMSAGVSYRF 83
>gi|52841872|ref|YP_095671.1| hypothetical protein lpg1644 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628983|gb|AAU27724.1| hypothetical protein lpg1644 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 254
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 62/202 (30%), Gaps = 24/202 (11%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGI----ELGHN-IQLEDFVFGINCHTTAAKDDSTF 119
++ + + +N ++ G G+ LG+ + F + + ++
Sbjct: 52 YNFKRNETSQELNFTDFDHFDWYGSGVGGEIYLGYEKFFRTHYYFSLEGFFNRSSNEGKI 111
Query: 120 Y------------RLKEKYFIYGDVVLKAG-YSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
Y K + + G Y +IYG G+ + V S
Sbjct: 112 YFFDSNELYSRILNGAFKQKWQSGLAIHPGIYLPSVGIIYGRVGWIISDVNLSGSITQSG 171
Query: 167 -DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-----HHIHSVNNSNAKS 220
S + + + V LG GL+ + + + + +++N +
Sbjct: 172 LFGSFSGRFSNTKKKNGVQLGTGLELELTQNWRCRVEWDWNRLQDFTFDTQGKDSNNHRY 231
Query: 221 DVERVDRKGNAHIASLGINMHF 242
R+ + LG+N F
Sbjct: 232 QTTRIAKHPILEQFKLGLNWRF 253
>gi|237797500|ref|ZP_04585961.1| outer membrane protein W [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020350|gb|EGI00407.1| outer membrane protein W [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 228
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 6/104 (5%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVNYDISLS 200
Y G D + D + +G+DYM+ ++ ++
Sbjct: 128 RFQPYAGVGINYTTFFD---TDLTGDRKNQGFSDLKLKDSVGLAAQLGMDYMITENVLVN 184
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH--IASLGINMHF 242
AS Y+ + + + V + + + +G+ F
Sbjct: 185 ASVWYVDIDTKATVDGPSALAVGKTKVDVDIDPWVYMVGVGYKF 228
>gi|152992483|ref|YP_001358204.1| hypothetical protein SUN_0889 [Sulfurovum sp. NBC37-1]
gi|151424344|dbj|BAF71847.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 212
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 16/188 (8%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G YVGL Y I+ Y + +G ++ G+ + +
Sbjct: 41 AGFYVGL----AYAAVHNEVAISNGRYGDVDYHGYMLQAGYKF---NPYIAVEARY---- 89
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D+ ++ + G L A D+ +Y + + + + G
Sbjct: 90 WDTKDDKITTTHPTGGTRTLDA--QFDAWGVYLKPMYPVTEA-LDVYVLLGWGHQDSQHG 146
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
++ SS G G Y + +IS+ A Y+ + + N E +D +
Sbjct: 147 PYNPKDSSFSWGGGASYSLTENISVFA--DYVRIYDDTAIKGNVNPFGEIIDVDVESSSW 204
Query: 235 SLGINMHF 242
++G++ F
Sbjct: 205 NIGLSYKF 212
>gi|320577090|gb|ADW54054.1| truncated outer membrane protein A [Sodalis glossinidius]
Length = 154
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 19/143 (13%)
Query: 104 FGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDS 159
G + K + K Y + D L IY G ++
Sbjct: 4 LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWR 58
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ K DN + G S + +GL+Y + + Y+++ N
Sbjct: 59 ADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNI 108
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 109 GDAGTVGTRPDNSMLSVGVSYRF 131
>gi|294789433|ref|ZP_06754670.1| surface protein A [Simonsiella muelleri ATCC 29453]
gi|294482646|gb|EFG30336.1| surface protein A [Simonsiella muelleri ATCC 29453]
Length = 195
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 57/193 (29%), Gaps = 25/193 (12%)
Query: 55 SGNYVGLHISRLYETHPLA--DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT- 111
+G Y+ I Y D++ S + + + D+ T
Sbjct: 23 TGAYIQGDIGLTYMKADGTHYDSVRNAIKTSYNESKIMPRVSVGYDFGDWRVA--GDYTH 80
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF--GGAYVIDSSLEKVESDNS 169
A + + K + G V Y ++ L + + V E + N+
Sbjct: 81 YANIEDSTATNKFTTKVRGAGVSAI-YDFNTALPVPVQPYVGARVSVNKVKQESIAFGNN 139
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
S + G++Y ++ ++ A YRY +D
Sbjct: 140 ALISNSNSSTKVSPGVLAGMNYKLDNHFTVDAGYRY-----------------NHLDSSV 182
Query: 230 NAHIASLGINMHF 242
H AS+G+ F
Sbjct: 183 QTHEASVGLRYTF 195
>gi|149185443|ref|ZP_01863759.1| outer membrane protein-like protein [Erythrobacter sp. SD-21]
gi|148830663|gb|EDL49098.1| outer membrane protein-like protein [Erythrobacter sp. SD-21]
Length = 200
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 7/177 (3%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG AD + GI G+++ L GI + +
Sbjct: 28 GLYVGAIGGYEGVDVESADGTATAS---ADSAVYGINAGYDLSLGGAFVGIEGELS-TSN 83
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T + G Y G + + + S + G
Sbjct: 84 GDTSFPDSFGGAREGLETGGQYYIGARAGFALTPGIAAYGKVGYTALDTTAFTSSGSLGD 143
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYR---YIPHHIHSVNNSNAKSDVERVDRKG 229
+ + G GL + + YR Y ++ V + +
Sbjct: 144 LKENADGLRYGAGLQVALPGPLEARLEYRRSKYNDLADVDQGDAMTDQVVAGLAVRF 200
>gi|12382057|gb|AAG53001.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N +
Sbjct: 14 ADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGN 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|90418982|ref|ZP_01226893.1| putative outer surface protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337062|gb|EAS50767.1| putative outer surface protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 337
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 31/118 (26%), Gaps = 16/118 (13%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD----------GHGSSVVLGIG 188
+ + Y G G A+V + S + + L G
Sbjct: 180 TYGKITPYIGAGLGFAHVKYDDMNNTISCDGGLCGSETSIYKGVHKGESSWRFASSLMAG 239
Query: 189 LDYMVNYDISLSASYRYIPHHIHSV------NNSNAKSDVERVDRKGNAHIASLGINM 240
+ + + A YRY + S S V+ D N H G+
Sbjct: 240 ASVDITHKLKFDAGYRYTRISSGDAFAFDEQDRSFGASGVQGSDNGFNIHAVRAGLRY 297
>gi|153008556|ref|YP_001369771.1| porin opacity type [Ochrobactrum anthropi ATCC 49188]
gi|151560444|gb|ABS13942.1| porin opacity type [Ochrobactrum anthropi ATCC 49188]
Length = 284
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 48/218 (22%), Gaps = 35/218 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAA 113
G Y+ I AD + G + F+ G
Sbjct: 49 GWYLRGDIGYSKAKFKDADYATIDNCATCGGGSPTFGSNTLYGDLKGSFLVGGGVGYQVT 108
Query: 114 KDDSTF------YRLKEKYFIYGDV-----------VLKAGYS------------VDSLL 144
T R K YG +
Sbjct: 109 DYFRTDLTVDYMTRAKFDGHTYGSACNGDINCASDERGRFSALSILANAYVDLGNFAGFT 168
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G GG V ++ + + L G + ++ L A YR
Sbjct: 169 PYVGAGIGGTRVK---WGDLDDVRYGGTQEGAANWRFTYALMAGASVDLTQNLKLDAGYR 225
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + N + D N H +G+ F
Sbjct: 226 YRHINGGKMFEGNQWIG-DGYDNGMNVHDVRVGLRYMF 262
>gi|170726262|ref|YP_001760288.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169811609|gb|ACA86193.1| OmpA domain protein transmembrane region-containing protein
[Shewanella woodyi ATCC 51908]
Length = 184
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 34/190 (17%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH-TTAA 113
SG YVG + +L +D G G G+N D+ FG+ + +
Sbjct: 27 SGFYVGGSLGQLKVKTEDSDN----------GLGFGAYGGYN--FNDW-FGLEANMYLSG 73
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
Y L F + K Y ++ +YG G V+ +
Sbjct: 74 DLGGNGYDLGAGTFAF---TPKFTYQINDTFAVYGKVGIASMAVVYR----------PDR 120
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
D G V G+G++ + ++++ Y + + S + + +
Sbjct: 121 GIDEDFTGFGWVYGVGVNASITENLNIRLGYDIVKGDLDS------EYSFSEQNVDTDIS 174
Query: 233 IASLGINMHF 242
+LG++ F
Sbjct: 175 NFALGMHYQF 184
>gi|37624562|gb|AAQ96077.1| outer membrane protein II [Escherichia coli]
Length = 161
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+++ A + G S V G++Y + +I+ Y++ +N D
Sbjct: 16 ADTKANVPGGASYKDHDTGVSPVFAGGVEYAITPEIATRLEYQW----------TNNIGD 65
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + + SLG++ F
Sbjct: 66 AHTIGTRPDNGLLSLGVSYRF 86
>gi|311277854|ref|YP_003940085.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308747049|gb|ADO46801.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 347
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 40/197 (20%)
Query: 62 HISRLYETHPLADTINRKTYNSL-----------LPNGLGIELGHNIQLEDFVFGINCHT 110
+ + +DT +N G GI G+ Q+ ++ +
Sbjct: 29 YGGAKFGWSHYSDTSANNDFNDNMRQATDFDTNSDNVGGGIFGGY--QINNW-LAVEGGY 85
Query: 111 TAAKD---DSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVE 165
+ + K G + LKA Y + DS +YG G G +
Sbjct: 86 DYLGNMQFNGNNGAAGGKMKSQGLQLSLKASYGLSDSWDLYGRAGAMGYRAETEAAGHST 145
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
D G +L +G +Y ++ Y+++ + + ++
Sbjct: 146 FD-----------TGVRPLLAVGTEYAFTPSLAGRLEYQWV----------SNVGNENQI 184
Query: 226 DRKGNAHIASLGINMHF 242
+A + GI F
Sbjct: 185 GMTADASSVTAGIVYRF 201
>gi|163854232|ref|YP_001642275.1| porin opacity type [Methylobacterium extorquens PA1]
gi|163665837|gb|ABY33204.1| porin opacity type [Methylobacterium extorquens PA1]
Length = 285
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 61/225 (27%), Gaps = 43/225 (19%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLP-------NGLGIELGHNIQLEDFVFGIN 107
SG Y+ ++ + HP D I + P + G G Q+ + +
Sbjct: 53 SGWYLRGDFTQSWYDHPRDDAILDPNDPGMPPLVGLRLSSETGYGGGVGYQINPW---LR 109
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGD-----------------VVLKAGYSVDSLLIYGMGG 150
T + ++ +R ++ V G + Y G
Sbjct: 110 VDATIDQRAASSFRGYSSRSVFETGYNLEAGKVDVLTGLVNVYADIG-TWYGFTPYVGAG 168
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGH-------------GSSVVLGIGLDYMVNYDI 197
G A S + G + L GL Y +
Sbjct: 169 VGFADKRMSRNYTQTTCLIDACDGSAGTGPRNAAFRANHSVMTFAWALTAGLSYDIGAGF 228
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S+ A+YRYI + + + + A +G+ F
Sbjct: 229 SVDAAYRYIDLGR--IRSGLDEFGGLTRVKDLTASEFRVGLRYRF 271
>gi|14578720|gb|AAK68967.1| major outer membrane protein [Erwinia persicina]
Length = 148
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + N+ + R G S + +G++Y V + + +Y+++
Sbjct: 4 YTRLGGMVWRADSTQNANGTRIRDHDTGVSPLAAVGVEYAVTKNWATRLAYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + S+G++ F
Sbjct: 58 ----NNIGDAGTVGARPDNSMLSVGVSYRF 83
>gi|218675816|ref|YP_002394635.1| Outer membrane protein [Vibrio splendidus LGP32]
gi|218324084|emb|CAV25231.1| Outer membrane protein [Vibrio splendidus LGP32]
Length = 196
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 55/184 (29%), Gaps = 21/184 (11%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G ++ + +DT G + G+ + + G+
Sbjct: 33 GAYVGGGLSVYQDSDTDGHGNL-DSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYK 86
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
++ GY+ D+ + + + G + + D
Sbjct: 87 NGAEKLSPTSISASANIGYTFDNTIRPFVLAGLSSVDLHANQAANYG-----------DD 135
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ G+G++Y ++L SV++ + + ++ D + S G
Sbjct: 136 SGTGFHFGVGVEYTPIEHLTLRL---ISQADAVSVDDYSYQGSLKNDDHTLAFNSVSFGG 192
Query: 239 NMHF 242
+ +F
Sbjct: 193 SYNF 196
>gi|14578746|gb|AAK68980.1| major outer membrane protein [Brenneria nigrifluens]
gi|14578748|gb|AAK68981.1| major outer membrane protein [Brenneria nigrifluens]
gi|14578750|gb|AAK68982.1| major outer membrane protein [Brenneria nigrifluens]
Length = 145
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D+S + + G S + GL+Y ++ + + Y+++ N D V
Sbjct: 15 DSSDDLGHSNNDTGVSPLAAAGLEYAIDKNWATRLEYQWV----------NNIGDAATVG 64
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 65 GRPDNGLLSVGVSYRF 80
>gi|66047700|ref|YP_237541.1| OmpW [Pseudomonas syringae pv. syringae B728a]
gi|63258407|gb|AAY39503.1| OmpW [Pseudomonas syringae pv. syringae B728a]
Length = 228
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D+ L D + D + +G+DYM+ ++ L+A
Sbjct: 128 KFQPYAGVGINYTTFFDTDLTGNRKDQGFSNLKLKDS--VGLAGQLGMDYMITDNVLLNA 185
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAH--IASLGINMHF 242
S Y+ + + + V + + + +G+ F
Sbjct: 186 SVWYVDIDTKATVDGPSALAVGKTKVDVDIDPWVYMVGVGYKF 228
>gi|14578662|gb|AAK68938.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 AVATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|303327620|ref|ZP_07358061.1| adhesin/virulence factor Hek [Desulfovibrio sp. 3_1_syn3]
gi|302862560|gb|EFL85493.1| adhesin/virulence factor Hek [Desulfovibrio sp. 3_1_syn3]
Length = 215
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 59/185 (31%), Gaps = 16/185 (8%)
Query: 69 THPLADTINRKTYNSLLPNGLG--IELGHNI---QLEDFVFGINCHTTAA-----KDDST 118
T ++ + T S LG + +G++ Q I +
Sbjct: 36 TGNISRPYSDMTDESYSQFTLGGALAVGYDFYPQQQIPLRAEIEFALRGNSEKSWDSEFG 95
Query: 119 FYRLKEKYFI-YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ K + L Y + + + GA + + +E + +
Sbjct: 96 GSGVSTKGLWNTSTLFLNLYYDIQTDTPFVPYIGAGAGLAFNYVEYTVHSDGFGGSASEN 155
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ +G G+ Y N + ++ YR++ + V+++ K + + + LG
Sbjct: 156 FTNFAWNVGAGVAYNFNENFAVDLGYRFMMMGYNEVSSNGLKISNQPYNNE-----FMLG 210
Query: 238 INMHF 242
+ F
Sbjct: 211 LRFTF 215
>gi|188592265|ref|YP_001796863.1| outer membrane protein, ompa motif [Cupriavidus taiwanensis LMG
19424]
gi|170938639|emb|CAP63626.1| putative outer membrane protein, OmpA motif [Cupriavidus
taiwanensis LMG 19424]
Length = 204
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 59/210 (28%), Gaps = 28/210 (13%)
Query: 34 IDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIEL 93
I + G W Y+G + + ++ L +G
Sbjct: 21 IGATAPEARAQQLASPADGFW---YIGGDLGYTRQKFSTDRPGWTGVSSNNL--AVGFRG 75
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL-KAGYSVDSLLIYGMGGFG 152
G+ Q +V + ++ + FI G G+ + +G
Sbjct: 76 GY--QFSRYV-SVESTVSSLGAVEAESGGSKDKFIIGAWTASVVGHLPVTERFSLLGIAS 132
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+V VES N + LG+G Y + + L +Y S
Sbjct: 133 VGWVDGDRSGDVESRNRSAGL---------LTLGVGAAYAFSPNWRLRG--QYTNFGKLS 181
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SN D + +LG++ F
Sbjct: 182 WKGSN--------DAAVKSQTFTLGVDYMF 203
>gi|226942812|ref|YP_002797885.1| OmpW family outer membrane porin [Azotobacter vinelandii DJ]
gi|226717739|gb|ACO76910.1| OmpW family outer membrane porin [Azotobacter vinelandii DJ]
Length = 224
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G Y+ ++ L K + D + +G+DYM+ + L+A R
Sbjct: 131 PYVGVGLNYTYIFETKLGKAAEGKGFSGLDMQDS--IGLAAQVGVDYMLTDTLMLNAQVR 188
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YI + N VD N + + + F
Sbjct: 189 YIDIESKATTYLND--SKVTVDVDVNPWVYMVALGYKF 224
>gi|320577076|gb|ADW54047.1| outer membrane protein A [Sodalis glossinidius]
Length = 171
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 19/143 (13%)
Query: 104 FGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDS 159
G + K + K Y + D L IY G ++
Sbjct: 3 LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWR 57
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ K DN + G S + +GL+Y + + Y+++ N
Sbjct: 58 ADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNI 107
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 108 GDAGTVGTRPDNSMLSVGVSYRF 130
>gi|24375049|ref|NP_719092.1| OmpA family protein [Shewanella oneidensis MR-1]
gi|24349795|gb|AAN56536.1|AE015790_7 OmpA family protein [Shewanella oneidensis MR-1]
Length = 370
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 52/183 (28%), Gaps = 20/183 (10%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAA 113
+ YVG + H D + Y I G+ D+ FG
Sbjct: 31 TPWYVGAGLGVNNYEHIATDNGDDNPY------AWDIFAGY--MFNDY-FGAEIGYRDLG 81
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D T + + G + G + + G + +S ++
Sbjct: 82 SADWTTGGISNDAGVKGATLGLVGVWPLGNRWSLSAEAGAMYYTLENS-------QHTGT 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ + + +G G+ Y ++ L A Y RY N A S+ ++
Sbjct: 135 TSSSYSSNDFAPYVGAGVGYNFTDNLKLQAKYRRYENLDDTDFNTIEADSNYWGLELSYR 194
Query: 231 AHI 233
Sbjct: 195 FGT 197
>gi|328953107|ref|YP_004370441.1| hypothetical protein Desac_1404 [Desulfobacca acetoxidans DSM
11109]
gi|328453431|gb|AEB09260.1| hypothetical protein Desac_1404 [Desulfobacca acetoxidans DSM
11109]
Length = 240
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 46/189 (24%), Gaps = 20/189 (10%)
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA----------AKDDSTF 119
+ LG++ G + + + T
Sbjct: 56 GRYDNPFILGGLKVGTWFVKEGFLGYDYPDWMKYLGFHLDFSYHRLNFSRQLISGTGVTI 115
Query: 120 YRLKEKYFIYGDVVLKAGY------SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + G+ L Y G G + + + +
Sbjct: 116 ESEGYAATLAFMFTGRYGFLPDQDVPFGRLQPYISVGPGILFSGQKATAGTGAASIDTP- 174
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
++V+ G+ Y ++SL A YR+ N + V H
Sbjct: 175 -SNSTTDIALVVDAGVRYYALKNVSLDAFYRFRWAEPK--YNYTVLGNTLDVKPDYQLHS 231
Query: 234 ASLGINMHF 242
+G+ HF
Sbjct: 232 FQIGVAYHF 240
>gi|209695291|ref|YP_002263220.1| outer membrane protein A [Aliivibrio salmonicida LFI1238]
gi|208009243|emb|CAQ79504.1| outer membrane protein A [Aliivibrio salmonicida LFI1238]
Length = 367
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 61/196 (31%), Gaps = 37/196 (18%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y+G I + ++ G G+ LG+ +L ++ I
Sbjct: 54 YIGGKIGWTHFSNGCESQNLDC---DKEAMGGGVFLGY--KLNEW-LAIEGGYDYLGKAK 107
Query: 115 -----DDSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGM-GGFGGAYVIDSSLEKVES 166
D G ++ LKA Y + D+ ++G GG G +
Sbjct: 108 AIYPSLDDPSIDAPYSAKFQGIELGLKADYYLNDNWNVFGKVGGLGWRADKKGEELNYDV 167
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ S++LG GL+Y + + Y++ SV N
Sbjct: 168 EGRDQ--------DISLMLGAGLEYRLTKQLKTRFEYQWFD----SVGGENTGGS----- 210
Query: 227 RKGNAHIASLGINMHF 242
N + ++G+ F
Sbjct: 211 ---NINFITIGLTYSF 223
>gi|54295257|ref|YP_127672.1| hypothetical protein lpl2340 [Legionella pneumophila str. Lens]
gi|53755089|emb|CAH16580.1| hypothetical protein lpl2340 [Legionella pneumophila str. Lens]
Length = 242
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 28/147 (19%)
Query: 95 HNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
++ + F I + V G+ G
Sbjct: 121 YDYTSNNVNFLIEGDMYFNPVSTWLIPF---------VTAGLGF-----------GVAYV 160
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSS-VVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ D +L ++ + + FD LG GL VN + S++ Y YI
Sbjct: 161 HYDDYALPGIDPV---SERHHFDSSIKGIYQLGAGLLVPVNPNWSINLRYAYIHMGKVH- 216
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINM 240
+ + ++ N +GIN
Sbjct: 217 ---TTPNSLGPIELVLNNQNILVGINY 240
>gi|86144751|ref|ZP_01063083.1| hypothetical protein MED222_10078 [Vibrio sp. MED222]
gi|85837650|gb|EAQ55762.1| hypothetical protein MED222_10078 [Vibrio sp. MED222]
Length = 196
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 55/184 (29%), Gaps = 21/184 (11%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G ++ + +DT G + G+ + + G+
Sbjct: 33 GAYVGGGLSVYQDSDTDGHGNL-DSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYK 86
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
++ GY+ D+ + + + G + + D
Sbjct: 87 NGAEKLSPTSISASANIGYTFDNTIRPFVLAGLSSVDLHANQAANYG-----------DD 135
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ G+G++Y ++L SV++ + + ++ D + S G
Sbjct: 136 SGTGFHFGVGVEYTPIEHLTLRL---ISQADAVSVDDYSYQGSLKNDDHTLAFNSVSFGG 192
Query: 239 NMHF 242
+ +F
Sbjct: 193 SYNF 196
>gi|240141693|ref|YP_002966173.1| hypothetical protein MexAM1_META1p5294 [Methylobacterium extorquens
AM1]
gi|240011670|gb|ACS42896.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 285
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/225 (14%), Positives = 61/225 (27%), Gaps = 43/225 (19%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLP-------NGLGIELGHNIQLEDFVFGIN 107
SG Y+ ++ + HP D I + P + G G Q+ + +
Sbjct: 53 SGWYLRGDFTQSWYDHPRDDAILDPNDPGMPPLVGLRLSSETGYGGGVGYQINPW---LR 109
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGD-----------------VVLKAGYSVDSLLIYGMGG 150
T + ++ +R ++ V G + Y G
Sbjct: 110 VDATIDQRAASSFRGYSSRSVFETGYNLEAGKVDVLTGLVNVYADIG-TWYGFTPYVGAG 168
Query: 151 FGGAY-------------VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G A + + + + L GL Y +
Sbjct: 169 VGFADKRMSRNYTQTTCLIDGCDGSAGTGPRNAAFRANHSVMTFAWALTAGLSYDIGAGF 228
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S+ A+YRYI + + + + A +G+ F
Sbjct: 229 SVDAAYRYIDLGR--IRSGLDEFGGLTRVKDLTASEFRVGLRYRF 271
>gi|289669429|ref|ZP_06490504.1| membrane protein [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 124
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 29/97 (29%), Gaps = 6/97 (6%)
Query: 133 VLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ GY++ L Y G S +++ ++ G GIGL
Sbjct: 2 RGRIGYALGEHGDYLAYVTAGVARGEFDHSFNSSNTANSFTSSGGD---SADGYQAGIGL 58
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
++ ++S+ Y + + +
Sbjct: 59 QRWLSDNVSVGVEYLFTRLQDDATRVRVGPGTAPATN 95
>gi|320577060|gb|ADW54039.1| outer membrane protein A [Sodalis glossinidius]
Length = 99
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 10/72 (13%)
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ G S + +GL+Y + + Y+++ N D V + +
Sbjct: 1 AGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNIGDAGTVGTRPD 50
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 51 NSMLSVGVSYRF 62
>gi|254781128|ref|YP_003065541.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040805|gb|ACT57601.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 225
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 58/155 (37%), Gaps = 18/155 (11%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
GL+++ + + + + G+ +G + Q V+G + +
Sbjct: 55 GLYVAADFSKIDHQSPVRLQNLSLN-----GVSIGLDGQDGTLVYGASLGVEGFHLEPRG 109
Query: 120 YRLKEKYFIYGDVVLKAGYSVDS--------LLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+K + G ++ + G++ D+ LIYG GG A + + +
Sbjct: 110 GIDGDK--VAGTLLFRTGFTFDNNNSSILQNTLIYGFGG---ARIRNIMSVESADTAKST 164
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ V+G+G++ + +S+ YRY+
Sbjct: 165 IRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYV 199
>gi|157377581|ref|YP_001476181.1| outer membrane protein, putative [Shewanella sediminis HAW-EB3]
gi|157319955|gb|ABV39053.1| outer membrane protein, putative [Shewanella sediminis HAW-EB3]
Length = 182
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 30/187 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G + + D I +++ GLGI G+N FGI
Sbjct: 26 GFYLGGQV----NHTSVEDNIGTLDESAI---GLGIYGGYNFNDS---FGIETSIFLTDS 75
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
L+ + V++ ++ DS+ Y G V S +
Sbjct: 76 LVDEMDLRI-AAVTISPVIRHAFT-DSVTGYLKAGL-----------VVNKTYSNDDGVD 122
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
D G+ + G G+D + ++L SY N +D+
Sbjct: 123 EDYRGTGWLFGAGVDVTLTESLALRVSYEMSETEPEYSELENYYADISLKQFG------- 175
Query: 236 LGINMHF 242
+G++ F
Sbjct: 176 VGLHYRF 182
>gi|14578756|gb|AAK68985.1| major outer membrane protein [Erwinia tracheiphila]
gi|14578758|gb|AAK68986.1| major outer membrane protein [Erwinia tracheiphila]
Length = 147
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 10/68 (14%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S + IG +Y + + + Y+++ N D V + + +
Sbjct: 26 GDHDTGVSPLAAIGAEYALTKNWATRLDYQWV----------NNIGDANTVGTRPDNGML 75
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 76 SLGVSYRF 83
>gi|90414007|ref|ZP_01221991.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
3TCK]
gi|90324929|gb|EAS41450.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
3TCK]
Length = 327
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 46/151 (30%), Gaps = 19/151 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + + + G G+ LG+N + + F + T +
Sbjct: 26 WYAGARVGGTSYSDFSGLGPAQIDKED---WGGGVFLGYN--IVPW-FAVEGGYTYLGEA 79
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
D+V K ++V + + ++ G + S V D
Sbjct: 80 DIKGTNTSIEQQGIDLVGKFTWNVTNSIDLFAKAGGFYYFADSSGPIDVSDDGIIG---- 135
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G+G +Y N ++S Y+Y
Sbjct: 136 --------TAGVGAEYFFNKNLSARLEYQYY 158
>gi|71066683|ref|YP_265410.1| OmpA family protein [Psychrobacter arcticus 273-4]
gi|71039668|gb|AAZ19976.1| possible OmpA family protein [Psychrobacter arcticus 273-4]
Length = 213
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 47/155 (30%), Gaps = 23/155 (14%)
Query: 60 GLHISRLYETHPLADT--------INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G + Y + + P G+ G+N FG+
Sbjct: 55 GAQAAVSYGNGYTGQPYVGAKVGQFDLDVDGAEDPTAYGVYAGYNFDPN---FGMEAEFV 111
Query: 112 AAKDDS--TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ D + Y YG Y+ + +Y G G A VE N+
Sbjct: 112 GSDDADYRGGDINAKSYGAYGTYR----YAFPNTGLYAKGKLGVAKTE------VERANT 161
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+S+ G+GL Y VN + S+ A Y
Sbjct: 162 TANAFNGTDKDTSLAGGLGLGYSVNPNFSVEAEYD 196
>gi|320577086|gb|ADW54052.1| outer membrane protein A [Sodalis glossinidius]
Length = 173
Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 19/143 (13%)
Query: 104 FGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDS 159
G + K + K Y + D L IY G ++
Sbjct: 3 LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWR 57
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ K DN + G S + +GL+Y + + Y+++ N
Sbjct: 58 ADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNI 107
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 108 GDAGTVGTRPDNSMLSVGVSYRF 130
>gi|197250348|ref|YP_002145288.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197214051|gb|ACH51448.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 219
Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 52/181 (28%), Gaps = 27/181 (14%)
Query: 56 GNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVF 104
G Y+ + + + + G G+ +G++
Sbjct: 25 GIYITGKAGTSVVNVYGINSTFSQDKIVNGHATLPDRTKGVFGGGVAIGYDFYDPFQLPV 84
Query: 105 GINCHTTAAKDDSTFYR-----------LKEKYFIYGDVVLKAGY----SVDSLLIYGMG 149
+ TT + + K + + GY + + Y
Sbjct: 85 RLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQVRMTTYMVNGYYDFHNSTAFTPYISA 144
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G G A+V S+ + N + + GIG Y V +I + ASY+YI
Sbjct: 145 GVGLAHVKLSN-NTIPVGFGINETLSASKNNFAWGAGIGAKYAVTDNIMIDASYKYINAG 203
Query: 210 I 210
Sbjct: 204 K 204
>gi|89055469|ref|YP_510920.1| outer membrane protein, putative [Jannaschia sp. CCS1]
gi|88865018|gb|ABD55895.1| outer membrane protein putative [Jannaschia sp. CCS1]
Length = 188
Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 41/155 (26%), Gaps = 21/155 (13%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
WSG Y G + D + T N +G G+ D VFG+
Sbjct: 24 TDWSGFYAGGQLEFATADL---DNMAGTTLNEGQGLMIGASGGYRFDGGDVVFGVTGAAL 80
Query: 112 AAKDD----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ ++ GY + +L+ G G
Sbjct: 81 FGSTSLEPVVPAATPDPTLDMLLRAGIEIGYDLGPVLVTGGLGQTF-------------- 126
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
IG DYMV+ +I + A
Sbjct: 127 GVMTDATNSRRTEFGSYFAIGADYMVSDEIMVGAE 161
>gi|226942814|ref|YP_002797887.1| OmpW family outer membrane porin [Azotobacter vinelandii DJ]
gi|226717741|gb|ACO76912.1| OmpW family outer membrane porin [Azotobacter vinelandii DJ]
Length = 226
Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G Y+ ++ L K + D + +G+DYM+ + L+A R
Sbjct: 133 PYVGVGLNYTYIFETKLGKAAEGKGFSGLDMQDS--IGLAAQVGVDYMLTDTLMLNAQVR 190
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YI + N VD N + + + F
Sbjct: 191 YIDIESKATTYLND--SKVTVDVDVNPWVYMVALGYKF 226
>gi|260467075|ref|ZP_05813255.1| surface antigen msp4 family protein [Mesorhizobium opportunistum
WSM2075]
gi|259029184|gb|EEW30480.1| surface antigen msp4 family protein [Mesorhizobium opportunistum
WSM2075]
Length = 260
Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 70/236 (29%), Gaps = 30/236 (12%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH-PLADTINRKTYNSLLP----N 87
D + + SG Y+ +S L E + D T N+ +
Sbjct: 24 AADYDPPIYVDQAPDYVPVEVGSGWYLRGDVSYLAEKNFKNGDFTFPSTINNESFSQSED 83
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG------YSVD 141
+G D++ + + +S + + + G Y+
Sbjct: 84 AFFGSVGFGYHFNDYLR-ADLNFGYLPGNSANASYNDSAVVTSPTLPTVGSASLKNYAFS 142
Query: 142 SLL-------------IYGMGGFGGAY----VIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
+L Y G G + + ++ + N+ + + + +
Sbjct: 143 GMLNGYVDLGTYVGITPYVGAGVGVVRSTRKLSATYIDNNDPANNLTQQDNKNQYSLAYT 202
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
L GL Y V ++S+ Y+Y + + + V + + H LG+
Sbjct: 203 LNAGLAYQVTKNVSVDLGYQYFSAPDAEYVTAESLTSF-PVKKGISNHQVKLGLRY 257
>gi|254564201|ref|YP_003071296.1| hypothetical protein METDI5894 [Methylobacterium extorquens DM4]
gi|254271479|emb|CAX27494.1| conserved hypothetical protein; omp like [Methylobacterium
extorquens DM4]
Length = 285
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 32/225 (14%), Positives = 61/225 (27%), Gaps = 43/225 (19%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLP-------NGLGIELGHNIQLEDFVFGIN 107
SG Y+ ++ + HP D I + P + G G Q+ + +
Sbjct: 53 SGWYLRGDFTQSWYDHPRDDAILDPNDPGMPPLVGLRLSSETGYGGGVGYQINPW---LR 109
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGD-----------------VVLKAGYSVDSLLIYGMGG 150
T + ++ +R ++ V G + Y G
Sbjct: 110 VDATIDQRAASSFRGYSSRSVFETGYNLEAGKVDVLTGLVNVYADIG-TWYGFTPYVGAG 168
Query: 151 FGGAY-------------VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G A + + + + L GL Y +
Sbjct: 169 VGFADKRMSRNYTQTTCLIDGCDGSAGTGPRNAAFRANHSVMTFAWALTAGLSYDIGAGF 228
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S+ A+YRYI + + + + A +G+ F
Sbjct: 229 SVDAAYRYIDLGR--IRSGLDEFGGLTRVKDLTASEFRVGLRYRF 271
>gi|37624594|gb|AAQ96093.1| outer membrane protein II [Serratia plymuthica]
gi|37624598|gb|AAQ96095.1| outer membrane protein II [Serratia plymuthica]
Length = 162
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+++ + G S + +G++Y + + + Y+++ + D
Sbjct: 16 ADSKANYGNGTRLSDHDTGVSPLAAVGVEYALTKNWATRLDYQFV----------SNIGD 65
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + SLG++ F
Sbjct: 66 AGTVGARPDNTMLSLGVSYRF 86
>gi|298488878|ref|ZP_07006902.1| Outer membrane protein OprG [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298156553|gb|EFH97649.1| Outer membrane protein OprG [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 228
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D+ L D + D + +G+DYM+ ++ ++A
Sbjct: 128 KFQPYAGVGINYTTFFDTDLTGNRKDQGFSNLKLKDS--VGLAAQLGMDYMITDNVLVNA 185
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAH--IASLGINMHF 242
S Y+ + + + V + N + +G+ F
Sbjct: 186 SVWYVDIDTKATVDGPSALAVGKTKVDVNIDPWVYMVGVGYKF 228
>gi|262403402|ref|ZP_06079961.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262350394|gb|EEY99528.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 332
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 60/188 (31%), Gaps = 38/188 (20%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLE-DFVFGINCHTTAAKD 115
VG+ + + + YN P G+ G + G +
Sbjct: 26 VGVKGGYQW--------VLDENYNHSNPESAILGLYGGLQFTPSWSWDLG----YQYHDE 73
Query: 116 DSTFYRLKEKYFIYGDVVLKA-GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ L+ Y D+L +YG G + + L +
Sbjct: 74 LKADATSVNVKTWLIESALRYDWYLRDNLSLYGRLGAAYWDMEKTKL----------SSS 123
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ D G S + IG++Y N ++ LS Y+YI S+ SN K ++H
Sbjct: 124 KSDATGFSPLGEIGINYHFNPNVRLSTGYQYID----SIGKSNTG--------KYDSHGL 171
Query: 235 SLGINMHF 242
+ + F
Sbjct: 172 LVSLTYTF 179
>gi|153833224|ref|ZP_01985891.1| outer membrane protein OmpA [Vibrio harveyi HY01]
gi|148870495|gb|EDL69410.1| outer membrane protein OmpA [Vibrio harveyi HY01]
Length = 326
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/186 (11%), Positives = 46/186 (24%), Gaps = 32/186 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + L D + G G+ +G++ + G+
Sbjct: 25 YIGGKVG----MTTLDDACYLNSPCDDDAFGAGMHIGYDFTD---IIGLEYGVDYLG--D 75
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
K + + + + + D
Sbjct: 76 YKANFKSGANTVDTIDGDLW---------ALTLAPKFNWHLNDTWNLFAKIGGAYMISGD 126
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+G +Y ++ + S+ A Y RY ++ +A+ +
Sbjct: 127 EKDFVPTGSLGAEYTIDKNWSVRAEYQRYQDISDDVLD-------------DMDANFFGI 173
Query: 237 GINMHF 242
G N F
Sbjct: 174 GFNYKF 179
>gi|157376762|ref|YP_001475362.1| OmpA domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157319136|gb|ABV38234.1| OmpA domain protein transmembrane region-containing protein
[Shewanella sediminis HAW-EB3]
Length = 184
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 63/201 (31%), Gaps = 34/201 (16%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+G YVG + + + K +S G+G G+N ++
Sbjct: 16 ASTNALAANDHTGFYVGGSLGQ----------LKLKAGDSESGVGIGAYGGYN--FNEW- 62
Query: 104 FGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSL 161
FG+ + + + L F + K Y +D +YG G V+
Sbjct: 63 FGLEANMFVSGDLGDSRTDLGAGTFAF---TPKFTYQIDDTFSVYGKVGIASMAVVAR-- 117
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ D G G+G++ + ++++ Y +++
Sbjct: 118 --------PDYLRNEDFTGFGWAYGVGVNASMTENLNIRLGYD------VVTGELDSEYS 163
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + +LGI+ F
Sbjct: 164 NGAQNIDTDISNFALGIHYQF 184
>gi|209964069|ref|YP_002296984.1| heat resistant agglutinin 1, putative [Rhodospirillum centenum SW]
gi|209957535|gb|ACI98171.1| heat resistant agglutinin 1, putative [Rhodospirillum centenum SW]
Length = 217
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 52/204 (25%), Gaps = 32/204 (15%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH----- 109
SG Y+ + + + D GI G+ I + +
Sbjct: 30 SGPYIRGSLGYSWSSEDEIDYS----------PLWGIGAGYRI-NPNLRVDLTADWRDRY 78
Query: 110 -TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD---------SLLIYGMGGFGGAYVIDS 159
+ + +++ A Y + Y G G +
Sbjct: 79 IVEGGRGFAAGGLPINSEVDNRTLMVNAYYDFGAFDLMGNRQQVRPYLGAGIGLSTTKVD 138
Query: 160 SLEKVESD-NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
++ + +D N D S L G + YRY+ + ++
Sbjct: 139 DVDVIIADQNRLERFFGSDDDQFSWQLMAGAQVETGNGLFFDLGYRYVDLGKVQLTSTTG 198
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+D +AH + F
Sbjct: 199 A-----LDEDLSAHELVATLGYRF 217
>gi|24375951|ref|NP_719994.1| outer membrane protein, putative [Shewanella oneidensis MR-1]
gi|24350939|gb|AAN57438.1|AE015879_8 outer membrane protein, putative [Shewanella oneidensis MR-1]
Length = 188
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 58/201 (28%), Gaps = 30/201 (14%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
V Q +G YVG L ++ G G+ G+N ++
Sbjct: 16 VAGQALAATDTTGFYVGG---------ALNRVTVDVLDDAETGTGFGVYGGYN--FNEW- 63
Query: 104 FGINCHTTAAKD--DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
FG+ + A D D L+ D Y G +
Sbjct: 64 FGLEANLFATGDLGDKDVDISAGALTFTPKFTLQIN---DMFSAYAKVGVASMAMNVD-- 118
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
D G G+G++ V +++ SY + + + + +
Sbjct: 119 ---------GDGFDEDFTGFGWTYGVGVNAAVTERLNVRLSYDVTSGDLDA--DHHYVNY 167
Query: 222 VERVDRKGNAHIASLGINMHF 242
V D + ++G++ F
Sbjct: 168 VNVKDIDTDIKQLAIGVHYQF 188
>gi|320577106|gb|ADW54062.1| outer membrane protein A [Sodalis glossinidius]
Length = 157
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 131 DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ K Y + D L IY G ++ + K DN + G S + +GL
Sbjct: 10 SLAAKLSYPLTDDLDIYTRLG----GMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVGL 65
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y + + Y+++ N D V + + + S+G++ F
Sbjct: 66 EYAWTKNWATRLDYQWV----------NNIGDAGTVGTRPDNSMLSVGVSYRF 108
>gi|118594362|ref|ZP_01551709.1| hypothetical protein MB2181_01800 [Methylophilales bacterium
HTCC2181]
gi|118440140|gb|EAV46767.1| hypothetical protein MB2181_01800 [Methylophilales bacterium
HTCC2181]
Length = 229
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 43/150 (28%), Gaps = 7/150 (4%)
Query: 100 EDFVFGINCHTTAAKDD---STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+++ GI D + + ++ V + A +
Sbjct: 80 SNYLVGIGFDYNFTDLDIGRPLIDSNPAESTVTFELTNVMNLYVKPQFMISDTSQIYAKL 139
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS---- 212
+ + +D + G + +G G M+N ++SL Y +
Sbjct: 140 AYTRADLESNDAVVDFIGNTEPSLDGYSIGGGFANMINDNVSLFIEANYFNYGEEDTTYR 199
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S V + + A +GI F
Sbjct: 200 YDGSIGGLTSVGVASDIDGYNAKIGIAYLF 229
>gi|94495975|ref|ZP_01302554.1| OmpW family protein [Sphingomonas sp. SKA58]
gi|94424667|gb|EAT09689.1| OmpW family protein [Sphingomonas sp. SKA58]
Length = 221
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 48/185 (25%), Gaps = 28/185 (15%)
Query: 82 NSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY---------RLKEKYFIYGDV 132
N +GL G + +++ V T D + + G +
Sbjct: 41 NEKSGSGLPAFPGEKVSIDNAV-APEIDVTWMASDHIGFELIAATTKHSASGRTGTTGSI 99
Query: 133 VLKAGYSV---------------DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
K + + Y G + K
Sbjct: 100 -GKLASTWVLPPTLTAQYHFLPDAPVRPYVGAGVNYTLFYSEDASGALESAAGQTKVHMS 158
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G+D +N + L+ +YI + S + V++V + + +G
Sbjct: 159 DS-FGWAAQAGVDIDLNDRLFLNIDVKYIDIDTTA-RLSTTAAGVQKVHVDLDPLVFGVG 216
Query: 238 INMHF 242
+ M F
Sbjct: 217 VGMRF 221
>gi|294635962|ref|ZP_06714405.1| outer membrane protein OprG [Edwardsiella tarda ATCC 23685]
gi|291090719|gb|EFE23280.1| outer membrane protein OprG [Edwardsiella tarda ATCC 23685]
Length = 213
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 38/107 (35%), Gaps = 3/107 (2%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + D L Y G D+S ++ + + V GLDYMV+
Sbjct: 110 FGRAEDKLRPYLGVGVNYTTFFDNSFDQNAKNLGLHDLQATSSW--GVAGQAGLDYMVSE 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++AS YI V ++ D + + N + G F
Sbjct: 168 NWMINASVWYINIDTK-VKFRDSAGDQSSIKTEINPWVFMFGAGYRF 213
>gi|148253342|ref|YP_001237927.1| hypothetical protein BBta_1818 [Bradyrhizobium sp. BTAi1]
gi|146405515|gb|ABQ34021.1| hypothetical protein BBta_1818 [Bradyrhizobium sp. BTAi1]
Length = 257
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/223 (13%), Positives = 59/223 (26%), Gaps = 37/223 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTY-------NSLLPNGLGIEL-GHNIQLEDFV---- 103
G Y+ I + Y + + GI G + +
Sbjct: 19 GWYLRGDIGFSNQKVKDVHYTRESAYTPMTSFNQTSAFDTAGIYGVGVGYRFNSWFRADI 78
Query: 104 ---FGINCHTTAAKDDSTFYRL------------KEKYFIYGDVVLKAGYSVDSLLIYGM 148
+ N + + K ++ + + + G + + +
Sbjct: 79 TGQYRGNSNFKGTDRFNATANGVPYSGIDNYSASKSEWLVLANAYVDLG-TWWCITPFVG 137
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKG-----RFDGHGSSVVLGIGLDYMVNYDISLSASY 203
G GGA V ++ ++ NA + GL Y VN ++ L +Y
Sbjct: 138 AGVGGARVTIANFTDTGINSFTNAPSLASAPTSSKWNFAWAAHAGLAYNVNPNLVLELAY 197
Query: 204 RYIPHHIHSVNNSNAKSDVERVDR----KGNAHIASLGINMHF 242
Y+ + +H LG+ +F
Sbjct: 198 SYVDMGEGRTGVLTTYDGQTTGNIFKFKDITSHDLKLGLRWNF 240
>gi|39937376|ref|NP_949652.1| hypothetical protein RPA4316 [Rhodopseudomonas palustris CGA009]
gi|39651234|emb|CAE29757.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 291
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/267 (11%), Positives = 65/267 (24%), Gaps = 48/267 (17%)
Query: 22 HSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTY 81
+ A L + Y + G Y+ I + + Y
Sbjct: 9 AAGAASLVASAAMAADMPIAPPPAYAPPPTEDFGGWYLRGDIGFSNQQVKDVRHSDPTRY 68
Query: 82 -------NSLLPNGLGIEL-GHNIQLEDFV-------FGINCHTTAAKDDSTFYRL---- 122
+ + GI G Q ++ + + +
Sbjct: 69 TQLTSFDQTTTFDTAGIFGLGVGYQFNNWFRADLTGQYRGKSNFKGTDTFTATNTGFPYS 128
Query: 123 --------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
K + + + G + + + G G A V S+ V S+N G
Sbjct: 129 GVDNYSASKSELLFLANAYVDLG-TWWCITPFIGAGVGAARVTISNFTDVGSNNLFVGAG 187
Query: 175 ---------------RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ GL Y ++ ++++ +Y Y+ + +
Sbjct: 188 PTAIYGTYPSYALAGSGSQWNFAWAAHAGLAYKLSPNMTMELAYSYVDLGKGTTASDLRA 247
Query: 220 SDVERVDRKGNA-----HIASLGINMH 241
D H LG+ +
Sbjct: 248 YDSATRGNSFKFNNITSHDLKLGVRWN 274
>gi|28867907|ref|NP_790526.1| outer membrane protein OmpW [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213969271|ref|ZP_03397409.1| outer membrane protein OmpW [Pseudomonas syringae pv. tomato T1]
gi|301381775|ref|ZP_07230193.1| outer membrane protein W [Pseudomonas syringae pv. tomato Max13]
gi|302061025|ref|ZP_07252566.1| outer membrane protein W [Pseudomonas syringae pv. tomato K40]
gi|302130523|ref|ZP_07256513.1| outer membrane protein W [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28851143|gb|AAO54221.1| outer membrane protein OmpW [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213925949|gb|EEB59506.1| outer membrane protein OmpW [Pseudomonas syringae pv. tomato T1]
gi|331018215|gb|EGH98271.1| outer membrane protein W [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 228
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 6/104 (5%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVNYDISLS 200
Y G D + SD + +G+DYM+ ++ ++
Sbjct: 128 RFQPYAGVGINYTTFFD---NDLTSDRKSQGFSNLKLKDSVGLAAQLGMDYMITDNVLVN 184
Query: 201 ASYRYIPHHIHSVNNSNAKSDV--ERVDRKGNAHIASLGINMHF 242
AS Y+ + + + + V +VD + + +G+ F
Sbjct: 185 ASVWYVDINTEATVDGPSALAVGQTKVDVDIDPWVYMVGVGYKF 228
>gi|289675567|ref|ZP_06496457.1| outer membrane protein W [Pseudomonas syringae pv. syringae FF5]
gi|330899676|gb|EGH31095.1| outer membrane protein W [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330940971|gb|EGH43902.1| outer membrane protein W [Pseudomonas syringae pv. pisi str. 1704B]
gi|330976709|gb|EGH76750.1| outer membrane protein W [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 228
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D+ L + + D + +G+DYM+ ++ L+A
Sbjct: 128 KFQPYAGVGINYTTFFDTDLTGNRKNQGFSNLKLKDS--VGLAGQLGMDYMITDNVLLNA 185
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAH--IASLGINMHF 242
S Y+ + + + V + + + +G+ F
Sbjct: 186 SVWYVDIDTKATVDGPSALAVGKTKVDVDIDPWVYMVGVGYKF 228
>gi|14578696|gb|AAK68955.1| major outer membrane protein [Brenneria lupinicola]
Length = 146
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 10/89 (11%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
Y + + G S + +GL+Y + + Y+++
Sbjct: 3 VYTRLGGFFWRADSHDDVTGRGGNDTGISPLAAVGLEYAATKNWATRLDYQWV------- 55
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + S+G++ F
Sbjct: 56 ---NNIGDAGTVGGRPDNGMLSVGVSYRF 81
>gi|14578764|gb|AAK68989.1| major outer membrane protein [Brenneria rubrifaciens]
Length = 147
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 28/90 (31%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ D G S + +G++Y + + ++ Y+++
Sbjct: 4 YTRLGGIVWRADSHAAQSGVDRNNDDTGVSPLAALGIEYAFDKNWAVRVGYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D V + + S G++ F
Sbjct: 58 ----SNIGDAGTVGARPDNMFMSAGVSYRF 83
>gi|37624596|gb|AAQ96094.1| outer membrane protein II [Serratia plymuthica]
Length = 162
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + + G S + +G++Y + + + Y+++ + D
Sbjct: 16 ADSKVNYGNGTRLSDHDTGVSPLAAVGVEYALTKNWATRLDYQFV----------SNIGD 65
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + SLG++ F
Sbjct: 66 AGTVGARPDNTMLSLGVSYRF 86
>gi|330877585|gb|EGH11734.1| outer membrane protein W [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 228
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 6/104 (5%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVNYDISLS 200
Y G D + SD + +G+DYM+ ++ ++
Sbjct: 128 RFQPYAGVGINYTTFFD---NDLTSDRKSQGFSNLKLKDSVGLAAQLGMDYMITDNVLVN 184
Query: 201 ASYRYIPHHIHSVNNSNAKSDV--ERVDRKGNAHIASLGINMHF 242
AS Y+ + + + V +VD + + +G+ F
Sbjct: 185 ASVWYVDIDTKATVDGPSALAVGQTKVDVDIDPWVYMVGVGYKF 228
>gi|320577112|gb|ADW54065.1| outer membrane protein A [Sodalis glossinidius]
Length = 199
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 19/143 (13%)
Query: 104 FGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDS 159
G + K + K Y + D L IY G ++
Sbjct: 3 LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWR 57
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ K DN + G S + +GL+Y + + Y+++ N
Sbjct: 58 ADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYTWTKNWATRLDYQWV----------NNI 107
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 108 GDAGTVGTRPDNSMLSVGVSYRF 130
>gi|14578744|gb|AAK68979.1| major outer membrane protein [Brenneria nigrifluens]
Length = 145
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D+S + + G S + GL+Y ++ + + Y+++ N D V
Sbjct: 15 DSSDDLGHSNNDTGVSPLAAAGLEYAIDKNWATRLEYQWV----------NNIGDAATVG 64
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 65 GRPDNGLLSVGVSYRF 80
>gi|320577110|gb|ADW54064.1| outer membrane protein A [Sodalis glossinidius]
Length = 174
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 47/150 (31%), Gaps = 20/150 (13%)
Query: 97 IQLEDFVFGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFG 152
Q + G + K + K Y + D L IY G
Sbjct: 4 YQANPY-LGFEPGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG-- 59
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
++ + K DN + G S + +GL+Y + + Y+++
Sbjct: 60 --GMVWRADSKGAYDNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV------ 111
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + S+G++ F
Sbjct: 112 ----NNIGDAGTVGTRPDNSMLSVGVSYRF 137
>gi|294789631|ref|ZP_06754865.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
gi|294482432|gb|EFG30125.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
Length = 185
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 63/201 (31%), Gaps = 32/201 (15%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+ ++G VG +I + + T N++L +G ++G + V
Sbjct: 14 IPAAAMAADTFTGASVGTNIETTKYKIKNSIS-GENTRNAVLKGDVGFDMG-----NNLV 67
Query: 104 FGINCHTTAAKDDS-TFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSL 161
+ K D+ +K + + GY V L+ Y + +
Sbjct: 68 GAVEAKANLNKSDAFDTNGVKISQKDKYSIGYQQGYRVTKDLMPYAKAEYINSKFD---- 123
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
D + +G+G Y V ++ L A Y + + + + S
Sbjct: 124 ---------------DARANGYGVGMGAKYAVTDNVELGAEYVHSRLKGSRLKGNGSAS- 167
Query: 222 VERVDRKGNAHIASLGINMHF 242
D K + S G+ F
Sbjct: 168 ----DLKLRGNTVSAGVAYRF 184
>gi|170741255|ref|YP_001769910.1| porin opacity type [Methylobacterium sp. 4-46]
gi|168195529|gb|ACA17476.1| porin opacity type [Methylobacterium sp. 4-46]
Length = 297
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 54/223 (24%), Gaps = 39/223 (17%)
Query: 56 GNYVGLHISRLYETHPL---------ADTINRKTYNSLLPNGLGIELGHNIQLEDFV--- 103
G Y+ + A KT L + I G Q ++
Sbjct: 46 GWYLRGDVGVGITDLRQTIAEDVTVPAKPYKYKTIQDHLSDQFFIGAGVGYQFNPWLRAD 105
Query: 104 ----FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF-------- 151
+ D + + D K V +Y G
Sbjct: 106 ITGEYRSQADWRFVSKDVSPGVGPGQNLYNRD-TGKLSTVVSLANVYADLGTWYGVTPFI 164
Query: 152 -GGAYVIDSSLEKVESDNSKNAKGRFD------GHGSSVVLGIGLDYMVNYDISLSASYR 204
G V V + +A G F + + GL Y V+ ++ L +YR
Sbjct: 165 GAGVGVAHHMFGSVTDEGLGDAAGGFGYGPSNAKTNLAWAVHAGLGYAVSPNLKLELAYR 224
Query: 205 YIPHHIHSVNN-------SNAKSDVERVDRKGNAHIASLGINM 240
Y+ N + +H +G+
Sbjct: 225 YLNMGEARSGRLDCFPGCVNPPLSTVYTLKDIESHDIKIGMRW 267
>gi|260776687|ref|ZP_05885582.1| hypothetical protein VIC_002073 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607910|gb|EEX34175.1| hypothetical protein VIC_002073 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 192
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 7/177 (3%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
A N Q + + +G Y+G I + L ++ + L + +G+N +L
Sbjct: 20 AKNVDVQQAERGYLENGWYLGADI----ISTDLDSEFRGQSLQEVSSTSLALSVGYNFKL 75
Query: 100 -EDFVFGINCHTT-AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
E V G+ + K D L+ + + ++++ Y + G Y+
Sbjct: 76 TEALVVGLEGEYSNYGKFDLVDVPLQAVAGLTVRSTDISAFAINLKPKYFVSG-SDFYLG 134
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ + + + G+ Y +N + LSA YR I +
Sbjct: 135 GTLGFGTYHAEIETDQVNDSASDTGFTYGVEAGYALNNNWLLSAGYRSSSTDIDGFD 191
>gi|7327635|gb|AAF45029.2|AF146597_1 putative outer membrane protein [Aeromonas hydrophila]
Length = 344
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 50/184 (27%), Gaps = 24/184 (13%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + +G+N FG A +
Sbjct: 28 YFGAGAGAAHFNGLNKIGGGGYA-GTEDAAAANAFVGYNFTEN---FGTEFGYQYAGRGN 83
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T E + + + GG A+
Sbjct: 84 TDGLRYENQGATLSGIARLPLG-GDFSAFAEGGAYWAHTDGL---------------GTS 127
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
S + G+G+ Y VN + L A YRY+ V + +A + V K N +A+L
Sbjct: 128 DTKVSPLAGLGVTYKVNDALDLQARYRYMW----DVADLHAGDAPDDVRYKSNQSVATLE 183
Query: 238 INMH 241
H
Sbjct: 184 AVYH 187
>gi|26987243|ref|NP_742668.1| OmpW family protein [Pseudomonas putida KT2440]
gi|24981884|gb|AAN66132.1|AE016241_9 outer membrane protein OprG [Pseudomonas putida KT2440]
Length = 227
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D L + + D + +G+DYM+ ++ ++A
Sbjct: 127 RFQPYAGVGINYTLFFDEDLSSARKEQGFSNLKLQDS--VGIAGQLGMDYMLTDNLLVNA 184
Query: 202 SYRYIPHHIHSVNNSNA--KSDVERVDRKGNAHIASLGINMHF 242
S Y+ + N +VD + + +G+ F
Sbjct: 185 SVWYVDIDTKASVNGPTALGYSKTKVDVDVDPWVYMVGLGYKF 227
>gi|14578698|gb|AAK68956.1| major outer membrane protein [Brenneria lupinicola]
Length = 146
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 10/86 (11%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
L + + + G S + +GL+Y + + Y+++
Sbjct: 6 RLGGLVWGDENQPNSGGISNHDTGISPLAAVGLEYAATKNWATRLDYQWV---------- 55
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
N + V + + + S+G++ F
Sbjct: 56 NNIGEAGTVGGRPDNGMLSVGVSYRF 81
>gi|212710712|ref|ZP_03318840.1| hypothetical protein PROVALCAL_01779 [Providencia alcalifaciens DSM
30120]
gi|212686409|gb|EEB45937.1| hypothetical protein PROVALCAL_01779 [Providencia alcalifaciens DSM
30120]
Length = 213
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G D L Y G + D D + G+DY +
Sbjct: 111 FGSKEDKLRPYLGAGLNYTFFFDEKFNSTGKDAKLSDLDLSSSW--GFAAQAGMDYNLTD 168
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+AS ++ ++ + +++D + + + G+ F
Sbjct: 169 NWMLNASVWWMNIETDVKFKADGQQ--QKIDTRLDPFVFMFGVGYRF 213
>gi|170729161|ref|YP_001763187.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169814508|gb|ACA89092.1| OmpA domain protein transmembrane region-containing protein
[Shewanella woodyi ATCC 51908]
Length = 182
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 56/187 (29%), Gaps = 30/187 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G + GLG+ G+N FGI A
Sbjct: 26 GFYLGGQ-------ANQTSLEDNIGVLDESAKGLGVYGGYNFNDS---FGIEAGFFATDS 75
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
++ F V ++ ++ DS+ Y G + S + +
Sbjct: 76 FVDEVDVRMAAFSLSPV-IRHAFT-DSVTGYLKAGLVLNRI-----------YSDDDEVD 122
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
G+ + G G+D + ++L Y + N +D+ V
Sbjct: 123 ESYQGTGWLFGAGVDVTITESLALRVFYEINETEPENSELDNYYADISLVQYG------- 175
Query: 236 LGINMHF 242
+G++ F
Sbjct: 176 IGLHYRF 182
>gi|330964934|gb|EGH65194.1| outer membrane protein W [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 228
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 6/104 (5%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVNYDISLS 200
Y G D + SD + +G+DYM+ ++ ++
Sbjct: 128 RFQPYAGVGINYTTFFD---NDLTSDRKSQGFSNLKLKDSVGLAAQLGMDYMITDNVLVN 184
Query: 201 ASYRYIPHHIHSVNNSNAKSDV--ERVDRKGNAHIASLGINMHF 242
AS Y+ + + + + V +VD + + +G+ F
Sbjct: 185 ASVWYVDINTEATVDGPSALAVGQTKVDVDIDPWVYMVGVGYKF 228
>gi|325577896|ref|ZP_08148129.1| outer membrane protein P5 [Haemophilus parainfluenzae ATCC 33392]
gi|325160326|gb|EGC72453.1| outer membrane protein P5 [Haemophilus parainfluenzae ATCC 33392]
Length = 366
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 58/205 (28%), Gaps = 23/205 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNG--------LGIELGHNIQLEDFVFGINC 108
Y G + + + SL G+ G+ I L FG+
Sbjct: 28 FYAGAKAGQASFHDGIKANTDATNPRSLGFGTGYNRNSVTYGVFGGYQI-LNQNNFGLAV 86
Query: 109 HTTAAKDDSTFYRLKEKYFIYGD-----VVLKAGYSVDSLLIYGMG----GFGGAYVIDS 159
++ + +K Y + L G G GA ++ S
Sbjct: 87 ELGYDDFGRAKFKHNGITRFKHTNHGAHLSVKGSYDLGGLTSALEGLDFYGRAGAALVRS 146
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPHHIHSVNNSN 217
+ + ++ S V G +Y + +++L Y+++
Sbjct: 147 DYKVYNAKGARVHGAGEHSLRVSPVFAAGFEYALPSLPELALRLEYQWL---ARVGKLRT 203
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
++ VD + G++ F
Sbjct: 204 GATENSSVDYNPWIGSINAGLSYRF 228
>gi|149189798|ref|ZP_01868078.1| hypothetical protein VSAK1_12800 [Vibrio shilonii AK1]
gi|148836284|gb|EDL53241.1| hypothetical protein VSAK1_12800 [Vibrio shilonii AK1]
Length = 187
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 59/190 (31%), Gaps = 32/190 (16%)
Query: 55 SGNYVGLHISRLYET-HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
SG Y+G ++ + +T LG++ G++ + +FG +
Sbjct: 28 SGFYLGTYLGAMSAKNTDNVVNSKTETSVKSNFRSLGLKAGYDF---NSMFGAEMRHSRD 84
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K ++V DS+ +YG+ G + + + ++
Sbjct: 85 SGKIEKNSQGLAVDHQTALYGKVKFNVSDSIELYGLAGVNNIRLKQAGYKGNDN------ 138
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+S G+G Y + + + +H +AH
Sbjct: 139 ----KKTINSFSYGVGAQYNFTNSLGANLELMKLSNHKQ-----------------FDAH 177
Query: 233 IASLGINMHF 242
+LG+ F
Sbjct: 178 SINLGLAYKF 187
>gi|281192981|gb|ADA57643.1| outer membrane protein A precursor [Aeromonas hydrophila]
Length = 343
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 52/184 (28%), Gaps = 25/184 (13%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I +G+N FG A +
Sbjct: 28 YFGAGVGAAHFNG--LNKIEDVNTGEENSAAANAFVGYNFTEN---FGTEFGYQYAGRGN 82
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T E + + + GG A+
Sbjct: 83 TNGLRYENQGATLSGIARLPLG-GDFSAFAEGGAYWAHTDGL---------------GTS 126
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
S + G+G+ Y VN + L A YRY+ V + +A + V K N +A+L
Sbjct: 127 DTKVSPLAGLGVTYKVNDALDLQARYRYMW----DVADLHAGDAPDDVRYKSNQSVATLE 182
Query: 238 INMH 241
H
Sbjct: 183 AVYH 186
>gi|152999646|ref|YP_001365327.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|217974400|ref|YP_002359151.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|151364264|gb|ABS07264.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|217499535|gb|ACK47728.1| OmpA/MotB domain protein [Shewanella baltica OS223]
Length = 369
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 51/180 (28%), Gaps = 19/180 (10%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAA 113
+ YVG + H Y + G+ D+ FG
Sbjct: 31 TPWYVGAGLGVNNYEHIATQNGQDDPY------AWDVFAGY--MFNDY-FGAEIGFRDLG 81
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D T + + G + G + + G + +S N+
Sbjct: 82 NADWTSAGISNDAGVKGSTLGLVGIWPLANRWSLSAEAGAMYYSLENS-------QNTAG 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A ++ + LG G+ Y ++ L A YR + N A S+ ++
Sbjct: 135 ASTKYGSSDFAPYLGAGVGYNFTDNLKLQAKYRRYENLNDDYNIVEADSNYWGLELSYRF 194
>gi|293394381|ref|ZP_06638681.1| attachment invasion locus protein [Serratia odorifera DSM 4582]
gi|291423359|gb|EFE96588.1| attachment invasion locus protein [Serratia odorifera DSM 4582]
Length = 231
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 50/155 (32%), Gaps = 13/155 (8%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK 125
++ + + + G+ + + +D ++GI T +Y +K
Sbjct: 76 AAGESSISIGYAQSKIKDVDDHPKGVNAKYRYEFDD-LWGIIGSFTYTNLSYDYYDGGDK 134
Query: 126 YFI----YGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
Y + Y + + +YG+ G + S+ + + D
Sbjct: 135 VGDSDFDYYSLTAGPSYRFNDYVSVYGLLGLAHGKIKSSAYSRY-------YEAEGDESK 187
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+SV G+GL + + ASY Y +
Sbjct: 188 TSVAYGVGLQVNPWPNWIIDASYEYSKLDDAKIGT 222
>gi|12382095|gb|AAG53020.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 28/82 (34%), Gaps = 10/82 (12%)
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
N + G S + +G++Y V + + Y+++ N
Sbjct: 12 YRADATQTNPTYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNI 61
Query: 220 SDVERVDRKGNAHIASLGINMH 241
D V + + + S+G++
Sbjct: 62 GDAGTVGARPDNSMLSVGVSYR 83
>gi|14578742|gb|AAK68978.1| major outer membrane protein [Brenneria nigrifluens]
Length = 145
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 10/76 (13%)
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D+S + + G S + GL+Y ++ + Y+++ N D V
Sbjct: 15 DSSDDLGHSNNDTGVSPLAAAGLEYAIDKSWATRLEYQWV----------NNIGDAATVG 64
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 65 GRPDNGLLSVGVSYRF 80
>gi|62999040|gb|AAY25026.1| major outer membrane protein [Aeromonas hydrophila]
Length = 344
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 50/184 (27%), Gaps = 24/184 (13%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + +G+N FG A +
Sbjct: 28 YFGAGAGAAHFNGLNKIGGGGYA-GTEDAAAANAFVGYNFTEN---FGTEFGYQYAGRGN 83
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T E + + + GG A+
Sbjct: 84 TDGLRYENQGATLSGIARLPLG-GDFSAFAEGGAYWAHTDGL---------------GTS 127
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
S + G+G+ Y VN + L A YRY+ V + +A + V K N +A+L
Sbjct: 128 DTKVSPLAGLGVTYKVNDALDLQARYRYMW----DVADLHAGDAPDDVRYKSNQSVATLE 183
Query: 238 INMH 241
H
Sbjct: 184 AVYH 187
>gi|297521813|ref|ZP_06940199.1| outer membrane protein A [Escherichia coli OP50]
Length = 181
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 47/155 (30%), Gaps = 20/155 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 28 WYTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRM 82
Query: 115 -DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ K + K GY + D L IY G +D N
Sbjct: 83 PYKGSVENGAYKAQGV-QLTAKLGYPITDDLDIYTRLG----------GMVWRADTKSNV 131
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G+ G S V G++Y + +I+ Y++
Sbjct: 132 YGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTN 166
>gi|12382113|gb|AAG53029.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 28/81 (34%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADSTQSNPTYGRISNHDTGLSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+ ++ F
Sbjct: 64 AGTVGARSDNSMLSVRVSYRF 84
>gi|192293156|ref|YP_001993761.1| hypothetical protein Rpal_4796 [Rhodopseudomonas palustris TIE-1]
gi|192286905|gb|ACF03286.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 291
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/267 (11%), Positives = 65/267 (24%), Gaps = 48/267 (17%)
Query: 22 HSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTY 81
+ A L + Y + G Y+ I + + Y
Sbjct: 9 AAGAASLVASVAVAADMPIAPPPAYAPPPVEDFGGWYLRGDIGFSNQQVKDVRHSDPTRY 68
Query: 82 -------NSLLPNGLGIEL-GHNIQLEDFV-------FGINCHTTAAKDDSTFYRL---- 122
+ + GI G Q ++ + + +
Sbjct: 69 TQLTSFDQTTTFDTAGIFGLGVGYQFNNWFRADLTGQYRGKSNFKGTDTFTATNTGFPYS 128
Query: 123 --------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
K + + + G + + + G G A V S+ V S+N G
Sbjct: 129 GVDNYSASKSELLFLANAYVDLG-TWWCITPFIGAGVGAARVTISNFTDVGSNNLFVGAG 187
Query: 175 ---------------RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ GL Y ++ ++++ +Y Y+ + +
Sbjct: 188 PTAIYGTYPSYALAGSGSQWNFAWAAHAGLAYKLSPNMTMELAYSYVDLGKGTTASDLRA 247
Query: 220 SDVERVDRKGNA-----HIASLGINMH 241
D H LG+ +
Sbjct: 248 YDSATRGNSFKFNNITSHDLKLGVRWN 274
>gi|193213614|ref|YP_001999567.1| porin opacity type [Chlorobaculum parvum NCIB 8327]
gi|193087091|gb|ACF12367.1| porin opacity type [Chlorobaculum parvum NCIB 8327]
Length = 221
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 54/186 (29%), Gaps = 28/186 (15%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G +IS + + + + NG+ + D K D +
Sbjct: 61 GAYISISAGLGIPENAETQYSGEDEMDNGIALNGALGYDFGDARL--EAAVGYQKHDFKY 118
Query: 120 YRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
V+ A Y +D + Y M G G A++
Sbjct: 119 GDDDLS---LLTVMANAYYDIDTGSDITPYLMAGAGWAHIGM--------------PSDE 161
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ +G GL + + +L YRY+ + N N D K H L
Sbjct: 162 SDDVFAWQVGAGLGFKIADCTTLDLGYRYLRPNKFETNERNIG------DVKWAVHNIML 215
Query: 237 GINMHF 242
G+ +F
Sbjct: 216 GLRFNF 221
>gi|14578664|gb|AAK68939.1| major outer membrane protein [Erwinia amylovora]
Length = 149
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQTNPTYGRISNHDTGVFPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + S+G++ F
Sbjct: 64 AGTVGASPDNSMLSVGVSYRF 84
>gi|12382111|gb|AAG53028.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 28/81 (34%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + + Y+++ N D
Sbjct: 14 ADATQSNPTYGRISNHDTGISPLAAVGVEYAVTKNWATRLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+ ++ F
Sbjct: 64 AGTVGARSDNSMLSVRVSYRF 84
>gi|320577084|gb|ADW54051.1| truncated outer membrane protein A [Sodalis glossinidius]
Length = 110
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 10/76 (13%)
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
DN + G S + +GL+Y + + Y+++ N D V
Sbjct: 22 DNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNIGDAGTVG 71
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 72 TRPDNSMLSVGVSYRF 87
>gi|14578676|gb|AAK68945.1| major outer membrane protein [Erwinia psidii]
Length = 149
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + N+ + G S + +G++Y + + + Y+++
Sbjct: 4 YTRLGGMVWRADSTQNNNGIRISDHDTGVSPLAAVGVEYALTKNWATRLDYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + SLG+ F
Sbjct: 58 ----NNIGDANTVGTRPDNGMLSLGVFYRF 83
>gi|21672909|ref|NP_660974.1| hemagglutinin-related protein [Chlorobium tepidum TLS]
gi|21645964|gb|AAM71316.1| hemagglutinin-related protein [Chlorobium tepidum TLS]
Length = 209
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 59/191 (30%), Gaps = 27/191 (14%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G Y+ + + L LG+N +
Sbjct: 43 AGPYISGAVGLGLPEKLEVLGEGDEKVKMDSGIALAGALGYN--FNPVRL--EAEVGYHR 98
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D + + + V+ A Y +D+ + Y MGG G + S +K +
Sbjct: 99 HDISDDYEIDGHVSLLTVMANAYYDIDAGSGIKPYLMGGAGWGHTNVSVTDKSDDVFV-- 156
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+G G+ V ++ +L YRY+ + V+N K+ K
Sbjct: 157 -----------WQVGAGVGAEVAHNTTLDLGYRYVKPNDFLVDNGGPKA-------KWAI 198
Query: 232 HIASLGINMHF 242
H LG+ F
Sbjct: 199 HNIMLGLRYQF 209
>gi|209168782|gb|ACI42382.1| major outer membrane protein [Aeromonas hydrophila]
Length = 344
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 50/184 (27%), Gaps = 24/184 (13%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + +G+N FG A +
Sbjct: 28 YFGAGAGAAHFNGLNKIGGGGYA-GTEDAAAANAFVGYNFTEN---FGTEFGYQYAGRGN 83
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T E + + + GG A+
Sbjct: 84 TDGLRYENQGATLSGIARLPLG-GDFSAFAEGGAYWAHTDGL---------------GTS 127
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
S + G+G+ Y VN + L A YRY+ V + +A + V K N +A+L
Sbjct: 128 DTKVSPLAGLGVTYKVNDALDLQARYRYMW----DVADLHAGDAPDDVRYKSNQSVATLE 183
Query: 238 INMH 241
H
Sbjct: 184 AVYH 187
>gi|117617594|ref|YP_855822.1| major outer membrane protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559001|gb|ABK35949.1| major outer membrane protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 344
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 50/184 (27%), Gaps = 24/184 (13%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + +G+N FG A +
Sbjct: 28 YFGAGAGAAHFNGLNKIGGGGYA-GTEDAAAANAFVGYNFTEN---FGTEFGYQYAGRGN 83
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T E + + + GG A+
Sbjct: 84 TDGLRYENQGATLSGIARLPLG-GDFSAFAEGGAYWAHTDGL---------------GTS 127
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
S + G+G+ Y VN + L A YRY+ V + +A + V K N +A+L
Sbjct: 128 DTKVSPLAGLGVTYKVNDALDLQARYRYMW----DVADLHAGDAPDDVRYKSNQSVATLE 183
Query: 238 INMH 241
H
Sbjct: 184 AVYH 187
>gi|313496871|gb|ADR58237.1| OprG [Pseudomonas putida BIRD-1]
Length = 227
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D L + D + +G+DYM+ ++ ++A
Sbjct: 127 RFQPYAGVGINYTLFFDEDLSSARKQQGFSNLKLQDS--VGIAGQLGMDYMLTDNLLVNA 184
Query: 202 SYRYIPHHIHSVNNSNA--KSDVERVDRKGNAHIASLGINMHF 242
S Y+ + N +VD + + +G+ F
Sbjct: 185 SVWYVDIDTKASVNGPTALGYSKTKVDVDVDPWVYMVGLGYKF 227
>gi|328953590|ref|YP_004370924.1| hypothetical protein Desac_1905 [Desulfobacca acetoxidans DSM
11109]
gi|328453914|gb|AEB09743.1| hypothetical protein Desac_1905 [Desulfobacca acetoxidans DSM
11109]
Length = 284
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 52/208 (25%), Gaps = 25/208 (12%)
Query: 57 NYVGLHISRLYETHPLAD------TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
++G + + H + GI+LG+ ++ + FG+
Sbjct: 80 FFIGGFVGAGFIPHSTWTYRVGGINYSADAMKIDPGVTGGIKLGYFLESFPY-FGVEAEG 138
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAG-----------YSVDSLLIYGMGGFGGAYVIDS 159
+ L G L+ + + Y +
Sbjct: 139 SIGSQRQPSQTLAVNPPQAGATALRVPGQTLLAWTMAFHLLGRYGFYQDAEVPFGRLQ-- 196
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY-----IPHHIHSVN 214
V S+ L GL YM Y++ + V
Sbjct: 197 PYVGVGPGLVMLYAEADSAKNFSLELEAGLRYMFTKHFGGFLEYKFSKQWSVELESQQVF 256
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S R + H A +G+ HF
Sbjct: 257 LNTIGSASGRGVFDFDRHQAVVGLAYHF 284
>gi|14578700|gb|AAK68957.1| major outer membrane protein [Brenneria quercina]
Length = 146
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 10/89 (11%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
Y + + G S + +GL+Y V + + Y+++
Sbjct: 3 VYTRLGGFFWRADSHDDVTGRGGNDTGISPMGAVGLEYAVTKNWATRLDYQWV------- 55
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D V + + + S+G++ F
Sbjct: 56 ---SNIGDAGTVGGRPDNGMLSVGVSYRF 81
>gi|212283809|gb|ACJ23322.1| outer membrane protein OmpA [Vibrio parahaemolyticus]
Length = 301
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 21/176 (11%), Positives = 47/176 (26%), Gaps = 28/176 (15%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
L D + G G+ +G++ G+ D ++
Sbjct: 5 GMTTLDDACYLNSPCDDEAFGAGLHIGYDFTD---FIGLEYGVDFLGDYKANFKSGASTV 61
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
++D L + ++ S + + +
Sbjct: 62 D----------TIDGNLTALTLAPKFNWHLNDSWNLFAKIGGAYMMSEDEKDFVA-TGSL 110
Query: 188 GLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G +Y ++ + S+ A Y RY + +A+ +G+N F
Sbjct: 111 GAEYSIDRNWSVRAEYQRYQDMSDDVWD-------------DMDANFFGIGVNYKF 153
>gi|88861307|ref|ZP_01135938.1| outer membrane protein A [Pseudoalteromonas tunicata D2]
gi|88816686|gb|EAR26510.1| outer membrane protein A [Pseudoalteromonas tunicata D2]
Length = 358
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 51/187 (27%), Gaps = 24/187 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG R + +++ + N + G+ + G
Sbjct: 42 WYVGGEFGRKRQDDLCKKSLSSCDSSD---NAWSVFFGYEFSKHWALEGGYTDLGEYSTT 98
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
L V G + + G + ++ KN+ +F
Sbjct: 99 GLVNGLTNH-----AVTSMTGLEFAGVFRMPLTEQAGLFTKLGAMYY--DGEEKNSIAKF 151
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYI-PHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
D G S + G+GL Y ++ Y ++ + H+ +
Sbjct: 152 DDKGWSALFGLGLSYDFTQNLQGRVEYNFLHDLGDSEFAGDHG-------------HLTT 198
Query: 236 LGINMHF 242
LG+ F
Sbjct: 199 LGLAYRF 205
>gi|117921584|ref|YP_870776.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117613916|gb|ABK49370.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 373
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 56/191 (29%), Gaps = 25/191 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAA 113
+ YVG + H D + Y I G+ D+ FG
Sbjct: 31 TPWYVGAGLGVNNYEHIATDNGDDNPY------AWDIFAGY--MFNDY-FGAEIGYRDLG 81
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D T+ + + G + G + + G + + +
Sbjct: 82 SADWTYAGIGNDADVKGATLGLVGVWPLGNRWSLSAEAGAMYYTLEN-------NQRVGG 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ + + G G+ Y ++ L A YR +++++ + + V+ N
Sbjct: 135 VSSSYSENDFAPYFGAGVGYNFTDNLKLQAKYRRY----ENLDDNAGANAIVPVNADSNY 190
Query: 232 HIASLGINMHF 242
++ F
Sbjct: 191 WGLE--LSYRF 199
>gi|312885261|ref|ZP_07744938.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367068|gb|EFP94643.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 323
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 53/187 (28%), Gaps = 44/187 (23%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD-D 116
YVG + + + + G G+ + I + D
Sbjct: 23 YVGGKVGKSWMDDAC-VAGQPCDDED---STYGAYAGYEF---NQKIAIEGGIERLGNYD 75
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + + F + K V + +YG G
Sbjct: 76 KSAFNGNVQAF---TLAPKFSLPVTPDIALYGKVGGAYTKFDG----------------- 115
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
S + G+++ ++ +++ A Y+ A +D+ K + A+
Sbjct: 116 --KDDYSYLGAAGVEFNISSNVTARAEYQ-------------ALTDINNDVTKAMGNSAT 160
Query: 236 LGINMHF 242
+GI+ F
Sbjct: 161 IGISYKF 167
>gi|188026071|ref|ZP_02960769.2| hypothetical protein PROSTU_02737 [Providencia stuartii ATCC 25827]
gi|188021508|gb|EDU59548.1| hypothetical protein PROSTU_02737 [Providencia stuartii ATCC 25827]
Length = 216
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G D L Y G + D + G+DYM+
Sbjct: 114 FGSKEDKLRPYLGAGINYTFFFDEKFNSGAKQLGLSDLDLSSSW--GFAAQAGMDYMLTE 171
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+AS ++ N ++VD + + + G+ F
Sbjct: 172 NWMLNASLWWMDIDTDVKFKFNG--AQQKVDTRLDPFVFMFGVGYRF 216
>gi|12382055|gb|AAG53000.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + R G S + +G++Y V + + Y+++ N +
Sbjct: 14 ADATQTNPTYGRIRTPNAGVSPLAAVGVEYAVTKNWATRLDYQWV----------NNIGN 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G++ F
Sbjct: 64 AGTVGARPDNSMLSVGVSYRF 84
>gi|291326239|ref|ZP_06123701.2| outer membrane protein OprG [Providencia rettgeri DSM 1131]
gi|291315147|gb|EFE55600.1| outer membrane protein OprG [Providencia rettgeri DSM 1131]
Length = 216
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 3/107 (2%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G D L Y G + D + G+DYM+
Sbjct: 113 FGSKEDKLRPYLGAGVNYTFFFDEKFNSTGKTAGLSDLDLSSSW--GFAAQAGMDYMLTD 170
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+AS ++ V + +++D + + + G F
Sbjct: 171 NWMLNASVWWMNIET-DVKFKHETLGNQKIDTRLDPFVFMFGAGYRF 216
>gi|113971301|ref|YP_735094.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113885985|gb|ABI40037.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 372
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 57/191 (29%), Gaps = 25/191 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAA 113
+ YVG + H D + Y I G+ D+ FG
Sbjct: 31 TPWYVGAGLGVNNYEHIATDNGDDNPY------AWDIFAGY--MFNDY-FGAEIGYRDLG 81
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D T+ + + G + G + + G + + + +
Sbjct: 82 SADWTYAGIGNDADVKGATLGLVGVWPLGNRWSLSAEAGAMYYTLEN-------NQRVGS 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ + + G G+ Y ++ L A YR +++++ + + V+ N
Sbjct: 135 VSTSYSENDFAPYFGAGVGYNFTDNLKLQAKYRRY----ENLDDNAGANAIVPVNADSNY 190
Query: 232 HIASLGINMHF 242
++ F
Sbjct: 191 WGLE--LSYRF 199
>gi|156977475|ref|YP_001448381.1| hypothetical protein VIBHAR_06262 [Vibrio harveyi ATCC BAA-1116]
gi|156529069|gb|ABU74154.1| hypothetical protein VIBHAR_06262 [Vibrio harveyi ATCC BAA-1116]
Length = 334
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 21/186 (11%), Positives = 52/186 (27%), Gaps = 32/186 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + L D + G G+ +G++ + G+ D
Sbjct: 33 YIGGKVG----MTTLDDACYLNSPCDDDAFGAGMHIGYDFTD---IIGLEYGVDYLGDYK 85
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
++ ++D L + ++ + +
Sbjct: 86 ANFKSGANTVD----------TIDGDLWALTLAPKFNWHLNDTWNLFAKIGGAYMISGDE 135
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+G +Y ++ + S+ Y RY + ++ +A+ +
Sbjct: 136 KDLV-PTGSLGAEYTIDRNWSVRGEYQRYQGMSDNVID-------------DMDANFFGI 181
Query: 237 GINMHF 242
G+N F
Sbjct: 182 GVNYKF 187
>gi|120600357|ref|YP_964931.1| OmpA domain-containing protein [Shewanella sp. W3-18-1]
gi|146291711|ref|YP_001182135.1| OmpA domain-containing protein [Shewanella putrefaciens CN-32]
gi|120560450|gb|ABM26377.1| OmpA domain protein transmembrane region-containing protein
[Shewanella sp. W3-18-1]
gi|145563401|gb|ABP74336.1| OmpA domain protein transmembrane region-containing protein
[Shewanella putrefaciens CN-32]
gi|319424943|gb|ADV53017.1| OmpA domain-containing protein [Shewanella putrefaciens 200]
Length = 192
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 53/188 (28%), Gaps = 31/188 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG + L ++ + +G+ + +
Sbjct: 35 GIYVGANYGYL--------KVDGADDFDDNSDVFQGLVGYRF---NQYLALEG--GYINF 81
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
L + LK + + D + +Y G +
Sbjct: 82 GKYGNNLAKAETDGYTAGLKVMFPIVDRVELYAKAGQLWYSTDYKVVGFSG--------- 132
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ V G G+ + V ++A Y + I++ N +N + + + A
Sbjct: 133 --NKDDEGVFAGAGVAFKVTDRFLINAEYTWYDAEINADNVANG------ANTETDFKQA 184
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 185 SLGVEYRF 192
>gi|330959958|gb|EGH60218.1| outer membrane protein W [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 228
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 34/103 (33%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D+ L + + D + +G+DYM+ + ++A
Sbjct: 128 RFQPYAGVGINYTTFFDNDLTSDRKNQGFSNLKLKDS--VGLAAQLGMDYMITDKVLVNA 185
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAH--IASLGINMHF 242
S Y+ + + + V R + + +G+ F
Sbjct: 186 SVWYVDIDTQATVDGPSALAVGRTKVDVDIDPWVYMVGVGYKF 228
>gi|14578684|gb|AAK68949.1| major outer membrane protein [Brenneria rubrifaciens]
Length = 147
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ D G S + +G++Y + + ++ Y++I
Sbjct: 4 YTRLGGIVWRADSHAAQSGVDRNNDDTGVSQLAALGIEYAFDKNWAVRVDYQWI------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D V + + S G++ F
Sbjct: 58 ----SNIGDAGTVGARPDNMFMSAGVSYRF 83
>gi|330830630|ref|YP_004393582.1| major outer membrane protein OmpAI [Aeromonas veronii B565]
gi|328805766|gb|AEB50965.1| Major outer membrane protein OmpAI [Aeromonas veronii B565]
Length = 339
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 37/150 (24%), Gaps = 21/150 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + +G+N FG +
Sbjct: 28 YFGAGVGA--THFNGLNKLESTNVGQEDAAAANAFMGYNFTEN---FGTELGYQYTGRGN 82
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T E + + + ++ GG +
Sbjct: 83 TDGNRYESQGATLSGIARMPVG-NDFSLFAEGGAYWGHTDGL---------------GTS 126
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
S + G G+ Y VN + L A YRY+
Sbjct: 127 DTKVSPLAGAGVTYKVNDALDLQARYRYMW 156
>gi|269963248|ref|ZP_06177582.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832053|gb|EEZ86178.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 185
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 56/203 (27%), Gaps = 33/203 (16%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF 102
+V Q + SG Y+G + T + + N +G Q
Sbjct: 13 SVCAQANGSQDVSGFYLGGGVGN--NTFSDDNPFTKVDDNGTAFKIIGG-----YQFNRI 65
Query: 103 VFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSL 161
V + T D + V GYS + L + G G V +
Sbjct: 66 V-AVEAQYTNYGDFKIVDTAYDLGASNVSVAANIGYSFINGLRPFATFGLGYMSVDIPTT 124
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYM--VNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + + + +G GL+Y +I+ +Y +++ K
Sbjct: 125 DNEDDLSLR--------------IGAGLEYTPIQLENITFRVAY--------EMDHFTVK 162
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+D G F
Sbjct: 163 PKGSSLDTDVQIGSFYAGATYKF 185
>gi|255067489|ref|ZP_05319344.1| putative outer membrane protein X [Neisseria sicca ATCC 29256]
gi|255048284|gb|EET43748.1| putative outer membrane protein X [Neisseria sicca ATCC 29256]
Length = 178
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 40/202 (19%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE--D 101
G ++G GL + + + N + + +N Q +
Sbjct: 13 ASAITFADGSFTGA--GLEVGAGATKSDVRN----VNLNEKTKGDVAVRGSYNTQFGQSN 66
Query: 102 FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSS 160
++ G+ K K + +V GY + D+ L YG G+ +
Sbjct: 67 WIGGVEA---GVKPLHRKIAGNAKQKVDANVSYVQGYRLTDNALAYGKVGYHYGRFNNL- 122
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
G + + + G+G Y V ++ + A + + ++
Sbjct: 123 -------------GAKRNNMNGLGYGVGAKYAVTPNVEVGAEWEQTRYKKDNL------- 162
Query: 221 DVERVDRKGNAHIASLGINMHF 242
K + + + F
Sbjct: 163 -------KVHNNSYMATVGYRF 177
>gi|114048539|ref|YP_739089.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113889981|gb|ABI44032.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 372
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 57/191 (29%), Gaps = 25/191 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAA 113
+ YVG + H D + Y I G+ D+ FG
Sbjct: 31 TPWYVGAGLGVNNYEHIATDNGDDNPY------AWDIFAGY--MFNDY-FGAEIGYRDLG 81
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D T+ + + G + G + + G + + + +
Sbjct: 82 SADWTYAGIGNDADVKGATLGLVGVWPLGNRWSLSAEAGAMYYTLEN-------NQRVGS 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ + + G G+ Y ++ L A YR +++++ + + V+ N
Sbjct: 135 VSTSYSENDFAPYFGAGVGYNFTDNLKLQAKYRRY----ENLDDNAGANAIVPVNADSNY 190
Query: 232 HIASLGINMHF 242
++ F
Sbjct: 191 WGLE--LSYRF 199
>gi|254286478|ref|ZP_04961435.1| outer membrane protein OmpA [Vibrio cholerae AM-19226]
gi|150423427|gb|EDN15371.1| outer membrane protein OmpA [Vibrio cholerae AM-19226]
Length = 321
Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 52/186 (27%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + + + ++ LG Q + + +
Sbjct: 24 YVGGKVGKSWLDDACLTGQSCEDDDQVVGAFLG------YQANKW-LSLEAGYDYLGKFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
EK + K + + +YG G
Sbjct: 77 AAGLNDEKVQAV-TLAPKLSIPLTEGIALYGKVGGAYVDYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S + GL++ N+++++ Y+ +D+ + A A+L
Sbjct: 117 SKDDYSYLGAAGLEFNTNHNVTMRLEYQ-------------NLTDINNDIVRARAETATL 163
Query: 237 GINMHF 242
GI F
Sbjct: 164 GIAYKF 169
>gi|307611275|emb|CBX00934.1| hypothetical protein LPW_26361 [Legionella pneumophila 130b]
Length = 242
Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 41/147 (27%), Gaps = 28/147 (19%)
Query: 95 HNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
++ + F I + V G+ G
Sbjct: 121 YDYTSNNVNFLIEGDMYFNPVSTWLIPF---------VTAGLGF-----------GVAYV 160
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSS-VVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ D +L ++ + + FD LG GL VN + S++ Y YI
Sbjct: 161 HYDDYALPGIDPV---SERHHFDSSIKGIYQLGAGLLVPVNPNWSINLRYAYIHMGKVH- 216
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINM 240
+ + + N +GIN
Sbjct: 217 ---TTPNSLGPIGLVLNNQNILVGINY 240
>gi|296157513|ref|ZP_06840348.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
gi|295892285|gb|EFG72068.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
Length = 160
Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 58/207 (28%), Gaps = 50/207 (24%)
Query: 36 LFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH 95
L N A ++G Y+G + ++ + S G G+
Sbjct: 3 LSNLAHAQSVQPLSSASQFAGPYLGFKVG-----VNSSNASGVISKASHTTVFPGFTAGY 57
Query: 96 NIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
N ++ F+ G A K+ G + K G + +L Y GF
Sbjct: 58 NFDIDRFIVGAEA---FADLHHGSTTYKD-----GGIDAKFGMPFNQILPYVRIGF---- 105
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
G G+G++Y IS + + +
Sbjct: 106 -----------------TGDDPDTRFHW--GLGIEYKFARHISAIGEW--------TTDT 138
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
SN K + ++G+ HF
Sbjct: 139 SNHDGT------KRTNNSFTIGLQYHF 159
>gi|14578734|gb|AAK68974.1| major outer membrane protein [Brenneria salicis]
gi|14578736|gb|AAK68975.1| major outer membrane protein [Brenneria salicis]
Length = 147
Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 12/91 (13%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSV--VLGIGLDYMVNYDISLSASYRYIPHHIH 211
Y + ++ + + V + IG++Y + D + Y+++
Sbjct: 3 VYTRLGGMVWRTDSHAAQGGFDRNNDDTGVFSLAAIGVEYAFDRDWAARVDYQWV----- 57
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D V + + + S+GI+ HF
Sbjct: 58 -----SNIGDAGTVGARPDNLMMSVGISYHF 83
>gi|326559314|gb|EGE09741.1| Opa-like protein A [Moraxella catarrhalis 7169]
gi|326569951|gb|EGE19998.1| Opa-like protein A [Moraxella catarrhalis BC1]
Length = 233
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 59/202 (29%), Gaps = 27/202 (13%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG------INCH 109
G YV + D G GI G + L + IN
Sbjct: 44 GYYVQADLGYSNLEAKYNDNRPNDNKLEDKGLGYGISFGKDTDLARYALDYKNYGKINSS 103
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY-----GMGGFGGAYVIDSSLEKV 164
T +T + + L A Y D++ + G S++
Sbjct: 104 YTYQPQTNTSITSSGELKAQ-SLGLSAIYDFDTVSGFTPYAGARVGINQIKSTVSTVTTT 162
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA--SYRYIPHHIHSVNNSNAKSDV 222
+ S+ + + + G Y +N +S+ A Y Y+ K D
Sbjct: 163 AAAQSRTTHSQKQENKVGFGVLAGAQYAINPQLSVDAGVEYNYL-----------GKYDK 211
Query: 223 ERVDRKGNAHI--ASLGINMHF 242
D K AH A +G+ +F
Sbjct: 212 LDTDSKLKAHQYGAKVGLRYNF 233
>gi|163866750|gb|ABY47335.1| putative outer membrane protein [Aeromonas hydrophila]
Length = 339
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 37/150 (24%), Gaps = 21/150 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + +G+N FG +
Sbjct: 28 YFGAGVGA--THFNGLNKLESTNVGQEDAAAANAFMGYNFTEN---FGTELGYQYTGRGN 82
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T E + + + ++ GG +
Sbjct: 83 TDGNRYESQGATLSGIARMPVG-NDFSLFAEGGAYWGHTDGL---------------GTS 126
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
S + G G+ Y VN + L A YRY+
Sbjct: 127 DTKVSPLAGAGVTYKVNDALDLQARYRYMW 156
>gi|320577094|gb|ADW54056.1| outer membrane protein A [Sodalis glossinidius]
Length = 165
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 10/76 (13%)
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
DN + S + +GL+Y + + Y+++ N DV V
Sbjct: 23 DNGNAGRISDHDTSISPMAAVGLEYSWTKNWATRLDYQWV----------NNIGDVGTVG 72
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 73 TRPDNSVLSVGMSYRF 88
>gi|14578690|gb|AAK68952.1| major outer membrane protein [Brenneria rubrifaciens]
Length = 147
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ D G S + +G++Y + + ++ +Y++I
Sbjct: 4 YTRLGGIVWRADSHAAQSGVDRNNDDTGVSPLAALGIEYAFDKNWAVRVNYQWI------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D V + + S G++ F
Sbjct: 58 ----SNIGDAGTVGARPDNMFMSAGVSYRF 83
>gi|52425216|ref|YP_088353.1| hypothetical protein MS1161 [Mannheimia succiniciproducens MBEL55E]
gi|52307268|gb|AAU37768.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 226
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/198 (12%), Positives = 43/198 (21%), Gaps = 36/198 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YV + D ++ K G D + +
Sbjct: 53 WYVQGDVGYSKIKASGMDDLDFKDNVFDQRISAG------YDFGDIRLAV--DYSHIGKA 104
Query: 117 STFYRLKEKYFIYGDV-----VLKAG----YSVD---SLLIYGMGGFGGAYVIDSSLEKV 164
Y L G Y + SL+ Y +
Sbjct: 105 KDHYTLFRGEQWETSGSTSVETNSFGISAIYDFNLNTSLMPYVGVRLSENSLKFEDHW-- 162
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
DNS + G+ Y + ++ L+ Y
Sbjct: 163 -RDNSASESYSETKTKFGYGALAGVQYHLTDNLLLNVGVEYNRLGKVE------------ 209
Query: 225 VDRKGNAHIASLGINMHF 242
+ K + + A G+ +F
Sbjct: 210 -EVKIHQYSAKAGLRYNF 226
>gi|229522162|ref|ZP_04411579.1| outer membrane protein A precursor [Vibrio cholerae TM 11079-80]
gi|229341087|gb|EEO06092.1| outer membrane protein A precursor [Vibrio cholerae TM 11079-80]
Length = 321
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 53/186 (28%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + + + ++ LG Q + + +
Sbjct: 24 YVGGKVGKSWLDDACLAGQSCEDDDQVVGAFLG------YQANKW-LSLEAGYDYLGKFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
EK + K + + +YG G
Sbjct: 77 AAGLNDEKVQAV-TLAPKLSIPLTEGIALYGKVGGAYVDYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S + GL++ N+++++ Y+ +D+ + +A A+L
Sbjct: 117 SKDDYSYLGAAGLEFNTNHNVTMRLEYQ-------------NLTDINNDTLRASAETATL 163
Query: 237 GINMHF 242
GI F
Sbjct: 164 GIAYKF 169
>gi|160874266|ref|YP_001553582.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160859788|gb|ABX48322.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|315266500|gb|ADT93353.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 369
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 50/182 (27%), Gaps = 19/182 (10%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAA 113
+ YVG + H Y + G+ D+ FG
Sbjct: 31 TPWYVGAGLGVNNYEHIATQNGQDDPY------AWDVFAGY--MFNDY-FGAEIGFRDLG 81
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D T + G + G + + G + +S + S
Sbjct: 82 NADWTNGATSNDAGVKGSTLGLVGIWPLANRWSLSAEAGAMYYSLENSQNNGITS----- 136
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
++ + + LG G+ Y ++ L A YR + N A S+ ++
Sbjct: 137 --SKYSTNDFAPYLGAGVGYNFTDNLKLQAKYRRYENLNDDYNIVEADSNYWGLELSYRF 194
Query: 232 HI 233
Sbjct: 195 GS 196
>gi|320577092|gb|ADW54055.1| outer membrane protein A [Sodalis glossinidius]
Length = 159
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 131 DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ K Y + D L IY G ++ + K DN + G S + +GL
Sbjct: 21 SLAAKLSYPLTDDLDIYTRLG----GMVWRADSKGAYDNGNAGRVSDHDTGVSPLTAVGL 76
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y + + Y+++ N D V + + + S+G++ F
Sbjct: 77 EYAWTKNWATRLDYQWV----------NNIGDAGTVGTRPDNSMLSVGVSYRF 119
>gi|270157433|ref|ZP_06186090.1| putative outer surface protein [Legionella longbeachae D-4968]
gi|289164174|ref|YP_003454312.1| outer membrane protein [Legionella longbeachae NSW150]
gi|269989458|gb|EEZ95712.1| putative outer surface protein [Legionella longbeachae D-4968]
gi|288857347|emb|CBJ11175.1| putative outer membrane protein [Legionella longbeachae NSW150]
Length = 213
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 59/200 (29%), Gaps = 29/200 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSL---LPNGLGIELGHNIQLEDFVFGINCHTTA 112
G Y + Y + + ++ +G LG+ Q + I
Sbjct: 24 GWYSSVFGGYAYIPGYTSKFDSGFFFSDTAYRNGYNVGGRLGY--QSNPLRYEIEYTYLQ 81
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYS----------VDSLLIYGMGGFGGAYVIDSSLE 162
A + + G+ G + + ++ + G G AY+ +S
Sbjct: 82 ADTKKFDVFYIPQVGVSGNTHANIGMANIYYDFADVILPTISPFLGVGIGYAYIQNSLDS 141
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ + GL Y + +L+ASYRY+ A S
Sbjct: 142 T---GPFGAIFFNQNNGVFAYQGTAGLTYNFAENWALNASYRYL-----------ATSSS 187
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ R + + +GI F
Sbjct: 188 DTFGRTFQSQMGDVGIVYRF 207
>gi|84386628|ref|ZP_00989654.1| outer membrane protein P1 precursor [Vibrio splendidus 12B01]
gi|84378434|gb|EAP95291.1| outer membrane protein P1 precursor [Vibrio splendidus 12B01]
Length = 411
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G G Y +N + L A Y YI +N S + + +AH + N F
Sbjct: 353 IGAGATYALNKNWELRAYYDYIDLDEPELNYSKGQVINVQGAYDNSAHFFGMQANYRF 410
>gi|304412567|ref|ZP_07394172.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307303583|ref|ZP_07583336.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|304349043|gb|EFM13456.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306912481|gb|EFN42904.1| OmpA/MotB domain protein [Shewanella baltica BA175]
Length = 369
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 50/182 (27%), Gaps = 19/182 (10%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAA 113
+ YVG + H Y + G+ D+ FG
Sbjct: 31 TPWYVGAGLGVNNYEHIATQNGQDDPY------AWDVFAGY--MFNDY-FGAEIGFRDLG 81
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D T + G + G + + G + +S + S
Sbjct: 82 NADWTNGATSNDAGVKGSTLGLVGIWPLANRWSLSAEAGAMYYSLENSQNNGITS----- 136
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
++ + + LG G+ Y ++ L A YR + N A S+ ++
Sbjct: 137 --SKYSTNDFAPYLGAGVGYNFTDNLKLQAKYRRYENLNDDYNIVEADSNYWGLELSYRF 194
Query: 232 HI 233
Sbjct: 195 GS 196
>gi|163758783|ref|ZP_02165870.1| putative heat resistant agglutinin 1 signal peptide protein
[Hoeflea phototrophica DFL-43]
gi|162284073|gb|EDQ34357.1| putative heat resistant agglutinin 1 signal peptide protein
[Hoeflea phototrophica DFL-43]
Length = 241
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 61/213 (28%), Gaps = 30/213 (14%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIE------------LGHNIQLEDF 102
+G Y+ + +T A + + G G+ LG D+
Sbjct: 29 TGWYLRGDLGYSVDTSGGATSYRVFNAGPPVSYGTGLFNGSSISSDWSGSLGFGYSFTDY 88
Query: 103 V---------FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
+ G T A D + + A +D G + G
Sbjct: 89 LRSDLTLDYSTGTFGSGTGAGADCAGQCANVNGQDFEQYTVMANAYIDLGTYAGFTPYVG 148
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY------IP 207
A S + D + + D + L GL Y ++ ++ L Y+Y
Sbjct: 149 AGAGVSRVSW---DPISSTQSGEDDWRFTYALMGGLSYDISKNLKLDLGYKYSKVNSGTQ 205
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ + N + + + D H +G+
Sbjct: 206 FNFTTANVALGATGGQAEDDGIEKHEVRVGLRY 238
>gi|329120556|ref|ZP_08249219.1| surface protein A [Neisseria bacilliformis ATCC BAA-1200]
gi|327460780|gb|EGF07114.1| surface protein A [Neisseria bacilliformis ATCC BAA-1200]
Length = 231
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 45/178 (25%), Gaps = 13/178 (7%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YV + + + G++ DF T K
Sbjct: 63 GFYVQGDLGHATVKYKED-----GDSWKTKGFSPRLSAGYD--FGDFRVA--ADYTHYKK 113
Query: 116 DSTFYRLKEKYFIYGDVVLKAG----YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + G Y D+ + SLE E+
Sbjct: 114 YDETLTDQFGTDHFEAKARSIGVSGIYDFDTGTPVKPYVGARIGINRISLEATETAPGFY 173
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K + + G+ Y ++ +I+L A YRY ++ V K
Sbjct: 174 EKESYSKTKLGLGAMAGVSYDISDNIALDAGYRYNHWGKFDGVKVHSNEFHGGVRVKF 231
>gi|222053440|ref|YP_002535802.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221562729|gb|ACM18701.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 455
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 17/166 (10%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G+ Y + + + GI G+N G + + T
Sbjct: 26 GVEPGAFYLSPIVGGYTFDGKQHLETQPVGGIRAGYNFTKH---LGAEALFDYTRTEGTR 82
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
K ++ YG L + + L+ Y G+ G + + K+
Sbjct: 83 SSTKTDFYRYGADALLHIFPDNRLVPYIAAGYSGMSLDSNDGTKLTRGVFD--------- 133
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
G G+ Y ++ +L +R++ + SN + ++ V
Sbjct: 134 -----YGPGIKYFISDTWALRGDFRHLIFKHEGDSYSNYEYNLGLV 174
>gi|95928671|ref|ZP_01311418.1| hypothetical protein Dace_2979 [Desulfuromonas acetoxidans DSM 684]
gi|95135461|gb|EAT17113.1| hypothetical protein Dace_2979 [Desulfuromonas acetoxidans DSM 684]
Length = 225
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 24/198 (12%), Positives = 53/198 (26%), Gaps = 12/198 (6%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G +V IS + + + +G++ + + +V G + T
Sbjct: 29 GPFVEAGISGSKTKTDVDFPNWFQADIDDDSVNGKVAIGYDQRFDRYVLGAKLYYTLGDQ 88
Query: 116 DSTFYRLKEKYFIYGDVVL-----KAGYSVDSLLIYGMGGFGGAYVIDSSLEK--VESDN 168
+S + + + G + +++ F +
Sbjct: 89 ESGSTTQRFRDTEEVSTLSFELDNSWGIELQPGIVFSEATFAYLSFGYARTTGEWTLDRP 148
Query: 169 SKNAKGRFDGHGSSVVLGIGLD----YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + LG G+ V + A + I + S + A S
Sbjct: 149 YYQDRYSGHVDFNGYSLGAGIKQKLFQNVTSHLYGFAEVQKIWYQQESTSAIIAGSSFVD 208
Query: 225 VDRKGNAHIASLGINMHF 242
D ++GI F
Sbjct: 209 -DYDPEILTITIGIGWQF 225
>gi|308273873|emb|CBX30473.1| hypothetical protein N47_K27130 [uncultured Desulfobacterium sp.]
gi|308275118|emb|CBX31717.1| hypothetical protein N47_E52290 [uncultured Desulfobacterium sp.]
Length = 355
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 43/157 (27%), Gaps = 18/157 (11%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G + T + GI LG++I +G+ D
Sbjct: 26 GERQGAITVTPNIGWYFFEGDQKLDDGITSGINLGYSITKN---WGVEGSINYIDSDRKG 82
Query: 120 YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+R E + + L+ Y G GG +
Sbjct: 83 FRDSEVTGYLYKLDALYNITKFGKLVPYLAAGAGGITLD--------------PSKGNTE 128
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ G GL Y + DI+L R++ S NN
Sbjct: 129 TDFLLNYGAGLKYFITDDIALRGDVRHVLPFNESQNN 165
>gi|37624584|gb|AAQ96088.1| outer membrane protein II [Klebsiella pneumoniae]
gi|37624588|gb|AAQ96090.1| outer membrane protein II [Klebsiella pneumoniae]
gi|37624590|gb|AAQ96091.1| outer membrane protein II [Klebsiella pneumoniae]
Length = 162
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + S G S V G+++ V DI+ Y+++ N D
Sbjct: 17 DSKGNYASTGVSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWV----------NNIGD 66
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + SLG++ F
Sbjct: 67 AGTVGTRPDNGMLSLGVSYRF 87
>gi|183179549|ref|ZP_02957760.1| outer membrane protein OmpA [Vibrio cholerae MZO-3]
gi|183012960|gb|EDT88260.1| outer membrane protein OmpA [Vibrio cholerae MZO-3]
Length = 321
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 52/186 (27%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + + + ++ LG Q + + +
Sbjct: 24 YVGGKVGKSWLDDACLAGQSCEDDDQVVGAFLG------YQANKW-LSLEAGYDYLGKFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
EK + K + + +YG G
Sbjct: 77 AAGLNDEKVQAV-TLAPKLSIPLTEGIALYGKVGGAYVDYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S + GL++ N+++++ Y+ +D+ + A A+L
Sbjct: 117 SKDDYSYLGAAGLEFNTNHNVTMRLEYQ-------------NLTDINNDIVRARAETATL 163
Query: 237 GINMHF 242
GI F
Sbjct: 164 GIAYKF 169
>gi|14578674|gb|AAK68944.1| major outer membrane protein [Erwinia psidii]
Length = 149
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + N+ + G S + +G++Y + + + Y+++
Sbjct: 4 YTRLGGMVWRADSTQNNNGIRISDHDTGVSPLAAVGVEYALTKNWATRLDYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + SLG+ F
Sbjct: 58 ----NNIGDANTVGTRPDNGMLSLGVFYRF 83
>gi|78186190|ref|YP_374233.1| outer surface protein, putative [Chlorobium luteolum DSM 273]
gi|78166092|gb|ABB23190.1| outer surface protein, putative [Chlorobium luteolum DSM 273]
Length = 195
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 48/156 (30%), Gaps = 20/156 (12%)
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
G + ++ ++ +S+ + G+ + + S Y
Sbjct: 60 TGYTLTGAVGLRSGEYRLEGELGYQENGIESSGDDVSI-LSFLGNGYIDFEMASSSFTPY 118
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
GFG A V DS + G D + LG G+ Y ++ + YRY+
Sbjct: 119 LTAGFGLASVDDS-----------SGPGSVDDTVFAWQLGAGVGYRFADNMLVDVRYRYL 167
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + H +G+ + F
Sbjct: 168 GTGDPEL--------AGGREYSIDTHNFMVGLRVEF 195
>gi|42768700|gb|AAS45565.1| putative outer membrane protein [Aeromonas hydrophila]
Length = 344
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 51/182 (28%), Gaps = 24/182 (13%)
Query: 61 LHISRLYETHPLADTINRKTY-NSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
L + I Y + +G+N FG A +T
Sbjct: 29 LRAGAGAAHFNGLNKIGGGGYAGTEDAAAANAFVGYNFTEN---FGTEFGYQYAGRGNTD 85
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
E + + + GG A+
Sbjct: 86 GLRYENQGATLSGIARLPLG-GDFSAFAEGGAYWAHTDGL---------------GTSDT 129
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
S + G+G+ Y VN + L A YRY+ V + +A + V K N +A+L
Sbjct: 130 KVSPLAGLGVTYKVNDALDLQARYRYMW----DVADLHAGDAPDDVRYKSNQSVATLEAV 185
Query: 240 MH 241
H
Sbjct: 186 YH 187
>gi|261365686|ref|ZP_05978569.1| putative outer membrane insertion C- signal [Neisseria mucosa ATCC
25996]
gi|288565777|gb|EFC87337.1| putative outer membrane insertion C- signal [Neisseria mucosa ATCC
25996]
Length = 178
Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 56/202 (27%), Gaps = 40/202 (19%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE--D 101
G ++G GL + + + N + + +N Q +
Sbjct: 13 ASAITFADGSFTGA--GLEVGAGATKSDVRN----VNLNEKTKGDVAVRGSYNTQFGQSN 66
Query: 102 FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSS 160
++ G+ K K + +V GY D ++ YG G+ +
Sbjct: 67 WIGGVEA---GVKPLHRKIAGNAKQKVDANVSYVQGYRFNDDVMAYGKVGYHYGRFDNL- 122
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
G + + + G+G Y + ++ + A + +
Sbjct: 123 -------------GAKRNNMNGLGYGVGAKYAIAPNVEVGAEWEQTRYKKD--------- 160
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D K + + + F
Sbjct: 161 -----DLKVHNNSYMATVGYRF 177
>gi|294011226|ref|YP_003544686.1| OOP-family protein [Sphingobium japonicum UT26S]
gi|292674556|dbj|BAI96074.1| OOP-family protein [Sphingobium japonicum UT26S]
Length = 360
Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 51/197 (25%), Gaps = 22/197 (11%)
Query: 57 NYVGLHISR--------LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC 108
YVG+ + N + +G++ F
Sbjct: 26 WYVGIDSGVVLVEDQDITFTPGNAGAASNTVGVDYHKGFDGDAVIGYD--FGGFRLEAEA 83
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
A+ D +G + ++ LL +G G V
Sbjct: 84 GYKRAEVDLDKSG-------FGGAASALSFMLNGLLDFGPDD--GLQGFVGGGVGVSRGK 134
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI---PHHIHSVNNSNAKSDVERV 225
N G + G+ Y + ++ +S YR+ + + V
Sbjct: 135 LANDLVNDSDTGFAWQAIAGVRYPLTTNVDVSLKYRFFNQDDIKLVPAYTTIGGPAGSSV 194
Query: 226 DRKGNAHIASLGINMHF 242
D K H LG+ +F
Sbjct: 195 DTKLRTHSLLLGLTYNF 211
>gi|255319613|ref|ZP_05360823.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262378987|ref|ZP_06072144.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255303297|gb|EET82504.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262300272|gb|EEY88184.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 451
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 1/113 (0%)
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
K + G V +L E D + + FD L +G +
Sbjct: 265 AATAKINHKFADGAGVVTGRALLQEVRARNLTGKEGDKDRVPEPYFDETELGWGLAVGAN 324
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN-AHIASLGINMHF 242
+ ++L+A Y ++ + + + + + + N + SLG F
Sbjct: 325 FKPTDQLTLNADYSHVKGDDKFLLYTENRYTAKGDNIELNEFNAVSLGATYKF 377
>gi|114704948|ref|ZP_01437856.1| probable heat resistant agglutinin 1 protein [Fulvimarina pelagi
HTCC2506]
gi|114539733|gb|EAU42853.1| probable heat resistant agglutinin 1 protein [Fulvimarina pelagi
HTCC2506]
Length = 300
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 51/196 (26%), Gaps = 19/196 (9%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
+ Y T Y +G L ++ F + ++
Sbjct: 103 VGIGYRLTDFLRTDVTFGYAKTDFDGGSRRLDSCYEMGRNTFDPPFDSDELDCRASLSGS 162
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES------------DNSK 170
+ Y + + G V Y G G A V ++ S +
Sbjct: 163 VQTYDLMANAYADLGTYVG-FTPYVGAGVGAAQVNYEDVDGGASCSYDGSDCDPSFADFT 221
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH-HIHSVNNSNAKSDVERV---- 225
+ + L G+ Y ++ + L YRY+ + N D ++
Sbjct: 222 GSYKGESSWRFAYALMGGVSYDLSQSLKLDLGYRYLNIDGGDMYSFDNDVVDAQKFGFSA 281
Query: 226 -DRKGNAHIASLGINM 240
D H G+
Sbjct: 282 EDDGFERHTIRAGVRY 297
>gi|71281689|ref|YP_269451.1| putative outer membrane protein [Colwellia psychrerythraea 34H]
gi|71147429|gb|AAZ27902.1| putative outer membrane protein [Colwellia psychrerythraea 34H]
Length = 200
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 64/190 (33%), Gaps = 29/190 (15%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY----- 120
+ L ++ Y S G G+ I + +F I +F
Sbjct: 27 GWYIGALYNSQTISIYQSREFKSAGAIAGYKI---NDIFSIETRLHKGTSGYSFNLLEPG 83
Query: 121 ----RLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKG- 174
+ K+ G ++ KA YS+ +Y + G+ ++LE + +
Sbjct: 84 FEDKKYKQDLDYQGHILAKASYSITEAFNVYALAGYTKTKTEITTLEFHTDLSGNTSVTY 143
Query: 175 --RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
++ + G+GL+Y + S+ Y+ D ++ + G+
Sbjct: 144 PHQYSENTDGFSYGVGLNYQIYNQFSVFVDYQ-------------VLPDFDKYQKSGSWD 190
Query: 233 IASLGINMHF 242
+LG+N F
Sbjct: 191 SLNLGVNYSF 200
>gi|152993437|ref|YP_001359158.1| hypothetical protein SUN_1854 [Sulfurovum sp. NBC37-1]
gi|151425298|dbj|BAF72801.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 357
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 62/188 (32%), Gaps = 14/188 (7%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG +Y D+ + GI L Q D+ + T +
Sbjct: 182 FYVGA--GTIYNRTYSVDSGWFDDGIATQDETGGISLIAGYQFNDY-LALETRITTTFYE 238
Query: 117 STFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEK-VESDNSKNAKG 174
+ L + LK Y V D+ +YG+ GFG V S + + K
Sbjct: 239 RNYADLTAY-----SMFLKPQYPVTDTFSVYGLLGFGKVKVEGSKGDSFPGAHTDMIGKT 293
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
D GIG+ Y V + S+ A Y + +S S V K +
Sbjct: 294 ILDDTQFQW--GIGVSYNVTDNFSIFA--DYTSLANDADIDSTLYSYDPAVYHKLSVDGV 349
Query: 235 SLGINMHF 242
++G+ F
Sbjct: 350 TVGLLYSF 357
>gi|254249287|ref|ZP_04942607.1| Opacity protein [Burkholderia cenocepacia PC184]
gi|124875788|gb|EAY65778.1| Opacity protein [Burkholderia cenocepacia PC184]
Length = 254
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 70/247 (28%), Gaps = 36/247 (14%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
L+++ + A + +P D +G Y I ++
Sbjct: 26 TLALLFSGAAFADTVAVPETKKTAELGD-------------AGYYATGRIIGAFDNAVNM 72
Query: 74 DTINRKTYNSLLPNGLGIEL----GHNIQLEDFVFGINCHTTAAKDDSTF---YRLKEKY 126
+ + + + + G + G Q + + + ++
Sbjct: 73 ELTSPRVASRVGGPDTGSNVTGSLGLGYQFGNG-WRAEGEYVFKRTNNFTSYWAPFDANA 131
Query: 127 FIYGDVVLKA---GY---SVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ + GY + +YG G G A V + ++
Sbjct: 132 NEFHVSAQRLMLNGYKDFDLGRGFSVYGTLGIGVAIVSADGWQTNDTRR----FASKTQT 187
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD----RKGNAHIAS 235
+ G G+ Y +N S+ YRY+ + + V D K +++
Sbjct: 188 NLAYSAGAGVSYAINKRFSIDLGYRYVDMGNVETGFNTFANRVNARDEQLKSKLSSNEVF 247
Query: 236 LGINMHF 242
+G+ F
Sbjct: 248 IGLRGRF 254
>gi|37624586|gb|AAQ96089.1| outer membrane protein II [Klebsiella pneumoniae]
Length = 162
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + S G S V G+++ V DI+ Y+++ N D
Sbjct: 17 DSKGNYASTGVSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWV----------NNIGD 66
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + SLG++ F
Sbjct: 67 AGTVGTRPDNGMLSLGVSYRF 87
>gi|14578752|gb|AAK68983.1| major outer membrane protein [Erwinia tracheiphila]
Length = 146
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ S + + S + IG +Y + + + Y+++ N
Sbjct: 8 GGMVWTPNSTQNIGTRIGDHDTVVSPLAAIGAEYALTKNWATRLDYQWV----------N 57
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
D V + + + LG++ F
Sbjct: 58 NIGDANTVGTRPDNGMLILGVSYRF 82
>gi|229513857|ref|ZP_04403319.1| outer membrane protein A precursor [Vibrio cholerae TMA 21]
gi|262192122|ref|ZP_06050283.1| outer membrane protein A precursor [Vibrio cholerae CT 5369-93]
gi|297580859|ref|ZP_06942784.1| outer membrane protein OmpA [Vibrio cholerae RC385]
gi|229349038|gb|EEO13995.1| outer membrane protein A precursor [Vibrio cholerae TMA 21]
gi|262031971|gb|EEY50548.1| outer membrane protein A precursor [Vibrio cholerae CT 5369-93]
gi|297534685|gb|EFH73521.1| outer membrane protein OmpA [Vibrio cholerae RC385]
Length = 321
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 53/186 (28%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + + + ++ LG Q + + +
Sbjct: 24 YVGGKVGKSWLDDACLAGQSCEDDDQVVGAFLG------YQANKW-LSLEAGYDYLGKFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
EK + K + + +YG G
Sbjct: 77 ADGLANEKVQAV-TLAPKLSIPLTEGIALYGKVGGAYVDYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S + GL++ N+++++ Y+ +D+ + +A A+L
Sbjct: 117 SKDDYSYLGAAGLEFNTNHNVTMRLEYQ-------------NLTDINNDTLRASAETATL 163
Query: 237 GINMHF 242
GI F
Sbjct: 164 GIAYKF 169
>gi|145590250|ref|YP_001156847.1| hypothetical protein Pnuc_2072 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048656|gb|ABP35283.1| hypothetical protein Pnuc_2072 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 231
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 31/241 (12%), Positives = 63/241 (26%), Gaps = 16/241 (6%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEY-GIWSGN--YVGLHI 63
L ++F+ V + + D + +A + + Y G+ G Y+ L
Sbjct: 2 KRLISLLFILFSVGALAQSTDSQKKSFEGFYAQAGVGYQTTNITYSGVVPGAPSYISLSP 61
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS--TFYR 121
+ TY+ +G + V G + T +
Sbjct: 62 GSSPSHGITGNVGAGYTYSINDRFSIGAGAEY-----YPVVGPPGNYTLTSCTPGCSTGN 116
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
++ + G SV + G + + S
Sbjct: 117 GSYHTQNMYNLFVTPGISVGN------DGLAYLKAGYTRTSVKTMVQGALPIAGTVSNPS 170
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
GIG + +I A Y Y + + A + + + +G+
Sbjct: 171 GPSFGIGYKQYIAGNIYGFAEYNYQIYQKTTTIFQGASGLLLYNSNQSSVQNLLVGLGYK 230
Query: 242 F 242
F
Sbjct: 231 F 231
>gi|254417815|ref|ZP_05031539.1| OmpA family protein [Brevundimonas sp. BAL3]
gi|196183992|gb|EDX78968.1| OmpA family protein [Brevundimonas sp. BAL3]
Length = 384
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 24/216 (11%), Positives = 56/216 (25%), Gaps = 30/216 (13%)
Query: 56 GNYVGLHISR---LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
G Y + + T Y LG+ ++ + +
Sbjct: 26 GWYGAIDAGYHMIDDINAESSTTGANWNYEVNDGWAAFARLGYRF-NPNWRVELEGGYRS 84
Query: 113 AKDDSTFYRLKE---------------------KYFIYGDVVLKAGYSVDSLLIYGMGGF 151
+ + +V+ GY + + G
Sbjct: 85 GDIGTVRAVSGTQGLCNLTPATGGCFSPEGDIESTTLMANVIYDFGYEAWGIRPFVGLGA 144
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----P 207
G +V ++ + ++ + + GL + V ++ +YRY+
Sbjct: 145 GVNHVNTDTVGNLRANRGASFGADDSSTEFAAQAIAGLAWAVGDRTNIDLTYRYLTGDAS 204
Query: 208 HHIHSVNNSNAKSDVERVDRKGN-AHIASLGINMHF 242
+V + D + +H +LG+ F
Sbjct: 205 FASTTVGTGVGATSFGEWDGDYDQSHTVTLGLRYSF 240
>gi|161089250|gb|ABX57670.1| outer membrane protein A [Klebsiella pneumoniae]
gi|161089252|gb|ABX57671.1| outer membrane protein A [Klebsiella pneumoniae]
Length = 173
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + S G S V G+++ V DI+ Y+++ N D
Sbjct: 24 DSKGNYASTGVSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWV----------NNIGD 73
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + SLG++ F
Sbjct: 74 AGTVGTRPDNGMLSLGVSYRF 94
>gi|148975589|ref|ZP_01812460.1| hypothetical protein VSWAT3_03476 [Vibrionales bacterium SWAT-3]
gi|145965017|gb|EDK30268.1| hypothetical protein VSWAT3_03476 [Vibrionales bacterium SWAT-3]
Length = 211
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 21/198 (10%)
Query: 55 SGNYVGLHISRLYETHP--LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
SG Y+G I + ++ T T+ + N + G+ + + + T
Sbjct: 25 SGLYLGGAIGTVDFEDDDLVSSTTEPVTFEAED-NSYRLIAGYKF---NRIVSLEVQYTD 80
Query: 113 AKDDSTFYRLKEKYFIYGD-----VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
D + V GY+ D+ + +G+ G + + +
Sbjct: 81 YGDLVAKNHADKTEGFTWTPQTVSVAANLGYTFDNGMRPFGIIGLSSIDLDMKN-----A 135
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
D S+ + FD G+ V G+G++Y +SL Y + + + +
Sbjct: 136 DGSRPSGSDFDDTGTGVRFGVGVEYTPPKLSALSLRLGYEADAFTLETYE--GDFWNRRK 193
Query: 225 VDRKGNAHIASLGINMHF 242
V++ LG +F
Sbjct: 194 VEKDIVLESFYLGATYNF 211
>gi|284008970|emb|CBA75863.1| heat resistant agglutinin 1 [Arsenophonus nasoniae]
Length = 226
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 45/154 (29%), Gaps = 19/154 (12%)
Query: 79 KTYNSLLPNGLGIELGHNI---------QLEDFVFGINCHTTAAKDDSTFYRLKEKYFI- 128
+ G G+ LG++ DF + D F+
Sbjct: 61 GDNHRTAVFGAGLTLGYDFYEKFNLPVRTELDFTSRAKADYNYSGYDENFFPGNTTVKNK 120
Query: 129 --YGDVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLE----KVESDNSKNAKGRFDGH 179
++L A Y + Y G G AY+ + V S +
Sbjct: 121 IELNTLMLNAYYDFKNSTDFTPYLSAGLGYAYISQKTSNIFKINVNSLTIPLWSRSHATN 180
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ G G+ Y +N D S SY+Y+ V
Sbjct: 181 NFAWSAGTGIKYSINQDFSFDLSYKYLDAGQAEV 214
>gi|14578704|gb|AAK68959.1| major outer membrane protein [Brenneria quercina]
Length = 146
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 34/92 (36%), Gaps = 11/92 (11%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ + S ++ + D G S + +GL+Y V + + Y+++
Sbjct: 1 LTFYTLQGGIYWRANSHDTLTSHDGND-TGISPMGEVGLEYAVTKNWATRLDYQWV---- 55
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D V + + + S+G++ F
Sbjct: 56 ------SNIGDAGTVGGRPDNGMLSVGVSYRF 81
>gi|262402916|ref|ZP_06079476.1| outer membrane protein W precursor [Vibrio sp. RC586]
gi|262350415|gb|EEY99548.1| outer membrane protein W precursor [Vibrio sp. RC586]
Length = 247
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + ++ Y G D + D + G+DYM+N
Sbjct: 145 FGEANSTIRPYVGAGLNYTTFFDEGFNSSGEGAGLSDLKLDDSW--GLAANAGVDYMLND 202
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + A D + D K N + + F
Sbjct: 203 SWFLNASVWYANIETTATYKAGA--DAKSTDVKINPWVFMIAGGYKF 247
>gi|149911588|ref|ZP_01900201.1| outer membrane protein OmpA [Moritella sp. PE36]
gi|149805367|gb|EDM65379.1| outer membrane protein OmpA [Moritella sp. PE36]
Length = 303
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 53/187 (28%), Gaps = 45/187 (24%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G + T + N+ + +G+ G+N + + ++
Sbjct: 27 GWYLGGKLG---ATVLDIEAANQTSDPDPSTASMGVVAGYNF---NDFLSVESDLSSFGK 80
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
++ ++ + + D +Y G +
Sbjct: 81 FKQGAEPEKLVAFSTYLLGRY-HVSDRAALYAKVGNSIIGNDLNLSG------------- 126
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
GIGL Y ++ + L YR + + + + + S
Sbjct: 127 ----------GIGLKYQISQQLELDTGYR---------------LIGDVPNTEDDLYEFS 161
Query: 236 LGINMHF 242
+GIN F
Sbjct: 162 VGINYKF 168
>gi|152982234|ref|YP_001355249.1| hypothetical protein mma_3559 [Janthinobacterium sp. Marseille]
gi|151282311|gb|ABR90721.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 198
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 22/192 (11%), Positives = 54/192 (28%), Gaps = 22/192 (11%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-----EDFVFGINCHT 110
G Y+G + R + ++ + G + G+ +V
Sbjct: 24 GAYIGFNAGRANQKISVSGDEGSGSVKDNS-TGYKLYGGYEFNQYFGVQGGYVNLGKGKI 82
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
A DD + +Y + + ++ G V + + +
Sbjct: 83 AYADDDVQGNFSSKVRSLYIAATATLPVN-NQFAVFAKLGVSRNRVKIADVYT---EAGV 138
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
++ ++GIG Y + ++ Y + ++
Sbjct: 139 AGYVSESDTRTTPLIGIGAAYNFSKKLAAVLEYE--NFGKVAKDDG----------VNLK 186
Query: 231 AHIASLGINMHF 242
A++ S+G+ F
Sbjct: 187 ANLFSVGLRYKF 198
>gi|14578702|gb|AAK68958.1| major outer membrane protein [Brenneria quercina]
Length = 146
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 10/89 (11%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
Y+ ++ + G S + +GL+Y V + + Y+++
Sbjct: 3 VYIRLGGFFWRADSHADVTGRGGNDTGISPMGAVGLEYAVTKNWATRLDYQWV------- 55
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ V + + + S+G++ F
Sbjct: 56 ---SNIGCAGTVGGRPDNGMLSVGVSYRF 81
>gi|332532064|ref|ZP_08407947.1| hypothetical protein PH505_ac00200 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038405|gb|EGI74849.1| hypothetical protein PH505_ac00200 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 215
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 63/206 (30%), Gaps = 37/206 (17%)
Query: 56 GNYVGLHIS------RLYETHPLADTINRKTYNSLLPNGLGIELGHNI-----QLEDFVF 104
G Y G+ I ++ R Y L +G + L V+
Sbjct: 28 GYYQGIGIGSTQIDVYESDSIQFTTLYGRFGYQFSRYFALEGRIGFGLNDESTPLNGIVY 87
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGG-------AYV 156
N + + + + + +KA Y + ++ GG+G +
Sbjct: 88 TQNPQDGSLSSEFIKSEIDSSLDLQTSIFVKANYPISSRADVFLFGGYGRNKLSYNEGDL 147
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + +D + + V G G+D+ + +SA Y+Y +
Sbjct: 148 KNLAESITGTDTNSTLITEQNYDEGGVTYGTGIDFRLTQRWQVSAEYQYFDTN------- 200
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+G+ + +L +N F
Sbjct: 201 -----------EGDIYALNLSVNYRF 215
>gi|160899400|ref|YP_001564982.1| opacity protein and related surface antigens-like protein [Delftia
acidovorans SPH-1]
gi|160364984|gb|ABX36597.1| Opacity protein and related surface antigens-like protein [Delftia
acidovorans SPH-1]
Length = 268
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 8/102 (7%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG G G A++ S N + + LG G+ Y +S+ YR
Sbjct: 171 VYGTAGLGLAHLQSSGW----QGNPNRQYFSDSQNNLAYALGFGVSYSPIQKVSIDLGYR 226
Query: 205 YIPHHIHSVNNSN----AKSDVERVDRKGNAHIASLGINMHF 242
Y+ +N E++ K ++ S+G+ F
Sbjct: 227 YVGMGKTHSGANNFTNVRGLQDEQMRAKLSSSEISVGLRYSF 268
>gi|310816462|ref|YP_003964426.1| hypothetical protein EIO_2017 [Ketogulonicigenium vulgare Y25]
gi|308755197|gb|ADO43126.1| hypothetical protein EIO_2017 [Ketogulonicigenium vulgare Y25]
Length = 88
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 11/99 (11%)
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
++YG G+ + V + + D V G G +Y N +L Y
Sbjct: 1 MVYGFVGYTRSEVDYVTTGAINLD--------ETVSLDGVTAGFGGEYAFNDSWALRGEY 52
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + A + + H S+G+ F
Sbjct: 53 AYSGYGKEELI---APAGGRVTNASIELHTISVGVTYSF 88
>gi|148475217|dbj|BAF63174.1| major outer membrane protein OmpAI [Aeromonas veronii]
Length = 340
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 49/179 (27%), Gaps = 21/179 (11%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + +G+N FG A +
Sbjct: 28 YFGAGVGAAHFNGLNKIDGGGYA-GTEDAAAANAFMGYNFTEN---FGTEFGYQYAGRGN 83
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T E + + + ++ GG A+
Sbjct: 84 TEGLRYENQGATLSGIARMPVG-NDFSLFAEGGAYWAHTDGL---------------GIS 127
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYI-PHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
S + G G+ Y V+ + L A YRY+ +V+ ++ KS+ + H
Sbjct: 128 DTKVSPLAGAGVTYKVSDALDLQARYRYMWDVADLNVDGTHYKSNQSVATLEAVYHPFR 186
>gi|170744188|ref|YP_001772843.1| hypothetical protein M446_6134 [Methylobacterium sp. 4-46]
gi|168198462|gb|ACA20409.1| hypothetical protein M446_6134 [Methylobacterium sp. 4-46]
Length = 209
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 48/161 (29%), Gaps = 19/161 (11%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
DE WSG+Y L ++ K + S +G E G Q V+G++
Sbjct: 53 GDEETRWSGSYAALSTGFA--------AVSSKHFGSSAGPTVGFEGGRMWQEGRLVYGVS 104
Query: 108 CHTTAAKDDSTFYRLKE-----KYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSL 161
+ G + +K G + +L+Y G +
Sbjct: 105 GGFDFLSALGGGAAPGFGGLAYSRDLAGGLEVKVGALLTPDVLVYAKAGAVAVHETLRVG 164
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
S + +G+++ V +S++
Sbjct: 165 PTAVSR-----SFAREDLAVRPEARVGVEWAVTDRLSVAVE 200
>gi|289163388|ref|YP_003453526.1| hypothetical protein LLO_0043 [Legionella longbeachae NSW150]
gi|288856561|emb|CBJ10366.1| hypothetical protein LLO_0043 [Legionella longbeachae NSW150]
Length = 385
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 5/108 (4%)
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVE----SDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
++ Y GG G ++ S ++ + A + +G GLD++
Sbjct: 275 FNFSKFSPYVNGGLGVSFNEARSFDETALPGITPRVSPAYANHTLTQFTYHVGAGLDFLF 334
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK-GNAHIASLGINM 240
+ SA Y + S E + + G+
Sbjct: 335 MPNWLFSAGYEFESFGDFSSGKGQYTWAGESLRLDSYQTNTLLFGVTY 382
>gi|14578754|gb|AAK68984.1| major outer membrane protein [Erwinia tracheiphila]
gi|14578762|gb|AAK68988.1| major outer membrane protein [Erwinia tracheiphila]
Length = 149
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ G S + IG +Y + + + Y+++ N
Sbjct: 14 ANSTQNKLTVLDIGDHDTGVSPLAAIGAEYALTKNWATRLDYQWV----------NNIGG 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + SLG++ F
Sbjct: 64 ANTVGTRPDNGMLSLGVSYRF 84
>gi|319781036|ref|YP_004140512.1| hypothetical protein Mesci_1302 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166924|gb|ADV10462.1| hypothetical protein Mesci_1302 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 285
Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 63/261 (24%), Gaps = 55/261 (21%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIE 92
D + + SG Y+ + + P I
Sbjct: 24 AADYDPPIYVDQAPDYVPVEVGSGWYLRGDLGYAFNKPYEFSETPAGLVTDTSPLSGSIG 83
Query: 93 LGH---NIQLEDFVFGIN------------------CHTTAAKDDSTFYRLKEK------ 125
+G+ + + FG+ T+ S F +
Sbjct: 84 MGYHFNDYFRGELNFGLLPTSKFASKFDSTCDGTQTVTVTSGGSTSAFAGPSTRGCEGSN 143
Query: 126 ------YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS------------------- 160
Y + + G V Y GG G AY
Sbjct: 144 DGNNKAYDVMASAFVDLGTYVG-FTPYVGGGVGIAYSTYKYAQGARNCQNSSTTSGTTTT 202
Query: 161 -LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
E + + + LG G Y V+ ++++ Y+Y ++A
Sbjct: 203 IFECDDPNGYDGTTQSEKQFSFAYTLGAGFAYQVSKNVAVDVGYQYTALPSAKYVTADAV 262
Query: 220 SDVERVDRKGNAHIASLGINM 240
+ E + + H +G+
Sbjct: 263 GNPE-FKKGLDYHQVKVGLRY 282
>gi|270158371|ref|ZP_06187028.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|269990396|gb|EEZ96650.1| conserved hypothetical protein [Legionella longbeachae D-4968]
Length = 303
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 5/108 (4%)
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVE----SDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
++ Y GG G ++ S ++ + A + +G GLD++
Sbjct: 193 FNFSKFSPYVNGGLGVSFNEARSFDETALPGITPRVSPAYANHTLTQFTYHVGAGLDFLF 252
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK-GNAHIASLGINM 240
+ SA Y + S E + + G+
Sbjct: 253 MPNWLFSAGYEFESFGDFSSGKGQYTWAGESLRLDSYQTNTLLFGVTY 300
>gi|154252136|ref|YP_001412960.1| OmpA domain-containing protein [Parvibaculum lavamentivorans DS-1]
gi|154156086|gb|ABS63303.1| OmpA domain protein transmembrane region-containing protein
[Parvibaculum lavamentivorans DS-1]
Length = 184
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 60/215 (27%), Gaps = 42/215 (19%)
Query: 3 FNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLH 62
N + + V + ++ + N +Q G YVG
Sbjct: 5 LNKMKTALRTICAAGVALGLAGFASAASAQETETRGNIYNQTHFQP-------GLYVGGG 57
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
+ + G + V G T D T +
Sbjct: 58 LGWGWSDD-------------DDDWTWKGIAGWRLNQYLAVQGFYADLT----DITVAGV 100
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
+G +L + D++ IYG GG N D +S
Sbjct: 101 SSDVDTFGAELLASFPVSDTMAIYGKGGL---------------HNYDEVGSGRD---TS 142
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ G G+D+ ++ ++SL + + V+ ++
Sbjct: 143 WLAGAGVDFALSDNMSLRTEWTHYDLDSDDVDEAS 177
>gi|294671105|ref|ZP_06735960.1| hypothetical protein NEIELOOT_02813 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307213|gb|EFE48456.1| hypothetical protein NEIELOOT_02813 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 193
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 24/192 (12%), Positives = 50/192 (26%), Gaps = 27/192 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+ + + G++ DF T K
Sbjct: 24 GFYIQGDAGHASVKGK-----AYGESVTAKGFSPRLSGGYD--FGDFRVA--ADYTHYKS 74
Query: 116 DSTFYRLKEKYFI-----YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
++ + + A Y + + S + E ++
Sbjct: 75 HKESGKISSSTNYDAKAKFQSFGVSAIYDIHLQSPVKPYVGARIGLNRVSFDTTEYSSNF 134
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ + + + G+ Y +N +I+L A YRY K +
Sbjct: 135 IERYETRKTKTGLGVMTGIGYDINQNIALDAGYRYNHWGKFD-------------GVKVH 181
Query: 231 AHIASLGINMHF 242
H S G+ + +
Sbjct: 182 THEVSAGVRIKY 193
>gi|144900096|emb|CAM76960.1| outer surface protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 211
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 21/190 (11%), Positives = 50/190 (26%), Gaps = 9/190 (4%)
Query: 57 NYVGLHISRLYETHPL----ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
Y+G + +T + T S G G++
Sbjct: 25 WYMGADAGVTFLEDADISGRDNTGSTWTDTSGNKAGYGLQAHGGYDFGGPRLEAEVAYRG 84
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ D + ++ +K + V + I + E +
Sbjct: 85 SSLD-SLAKVTQKVSGDTSALSFMTNGVYQFMPNSNWHPFIGAGIGVARVNAEWKVNGER 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ G+ Y ++ +++A YRY + +++ + + H
Sbjct: 144 VLNDSEWTFAYQGFAGVAYDIDKKWAVNAQYRYFATSDVKLTDTDGGTGT----FGYHNH 199
Query: 233 IASLGINMHF 242
G+ F
Sbjct: 200 AILAGLTYKF 209
>gi|262275699|ref|ZP_06053508.1| outer membrane protein A precursor [Grimontia hollisae CIP 101886]
gi|262219507|gb|EEY70823.1| outer membrane protein A precursor [Grimontia hollisae CIP 101886]
Length = 331
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 59/189 (31%), Gaps = 37/189 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y+G + L D G+ LG++ L + F I
Sbjct: 28 FYLGGRLG----VSTLNDACTTGNCGDNDDVAGGLILGYD--LGN-KFSIESTYDYLGRF 80
Query: 116 DSTFYRLKEKYFIYGDVVL--KAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
++ F + L K SV L IYG G + +
Sbjct: 81 NTAFQGANAGAGDLTALTLAPKFNVSVTELTDIYGKLGVAWW-------------DWSSK 127
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G D SV+ +G+D+ N +++ Y+YIP N+ + H
Sbjct: 128 AGTGDVDDYSVMAALGVDHRANDLVNVRLEYQYIPDMNKEYFNA-------------DNH 174
Query: 233 IASLGINMH 241
+ + G+ H
Sbjct: 175 LITAGVTFH 183
>gi|323495404|ref|ZP_08100481.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
gi|323310327|gb|EGA63514.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
Length = 324
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 20/188 (10%), Positives = 51/188 (27%), Gaps = 42/188 (22%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKD 115
YVG + + + + G +G+ I
Sbjct: 23 LYVGGKVGKSWLDDACTAATANCDD---DASTAGAFVGYEMWDF----LSIEGGYDYLGK 75
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+T +K + + K + + + +YG G +
Sbjct: 76 FTTDGLNDDKVEAF-TLAPKLNLPITNDISLYGKFGGAYVKYGN---------------- 118
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+S + G+++ + ++++ Y+ +D + + A
Sbjct: 119 ---KEDASYMGAAGVEFDSHENVTVRVEYQ-------------TITDANNEQVRAMGNSA 162
Query: 235 SLGINMHF 242
+LG+ F
Sbjct: 163 TLGVVYKF 170
>gi|95930146|ref|ZP_01312885.1| OmpA-like transmembrane region [Desulfuromonas acetoxidans DSM 684]
gi|95133840|gb|EAT15500.1| OmpA-like transmembrane region [Desulfuromonas acetoxidans DSM 684]
Length = 196
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 58/191 (30%), Gaps = 28/191 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQL--EDFVFGINCHTTA 112
G YVG + + D+ N GI G+ ++ FV G
Sbjct: 30 GFYVGA---AAVGSGVVVDSGGNTDKLDGDSNFSGGIYAGYKHRIFKGMFVAG-EAFYHD 85
Query: 113 AKDDSTFYRL-KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D TF + + V GY DS +YG+ G + + SD+
Sbjct: 86 TSQDETFSDGDRLELDSQYGVKTHIGYEWDSWSVYGILGAAALDYEITQNGEQTSDDHFR 145
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A +LG G Y N IS + + S ++
Sbjct: 146 A-----------LLGGGASYQYNEKISTNLE---------VTTCGDEISIAGDKNKTMGL 185
Query: 232 HIASLGINMHF 242
LG++ HF
Sbjct: 186 VTLRLGVSYHF 196
>gi|126173289|ref|YP_001049438.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125996494|gb|ABN60569.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 363
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 50/182 (27%), Gaps = 19/182 (10%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAA 113
+ YVG + H Y + G+ D+ FG
Sbjct: 25 TPWYVGAGLGVNNYEHIATQNGQDDPY------AWDVFAGY--MFNDY-FGAEIGFRDLG 75
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D T + G + G + + G + +S + S
Sbjct: 76 NADWTNGATSNDAGVKGSTLGLVGIWPLANRWSLSAEAGAMYYSLENSQNNGITS----- 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
++ + + LG G+ Y ++ L A YR + N A S+ ++
Sbjct: 131 --SKYSTNDFAPYLGAGVGYNFTDNLKLQAKYRRYENLNDDYNIVEADSNYWGLELSYRF 188
Query: 232 HI 233
Sbjct: 189 GS 190
>gi|37624574|gb|AAQ96083.1| outer membrane protein II [Klebsiella oxytoca]
gi|37624576|gb|AAQ96084.1| outer membrane protein II [Klebsiella oxytoca]
gi|37624578|gb|AAQ96085.1| outer membrane protein II [Klebsiella oxytoca]
gi|37624580|gb|AAQ96086.1| outer membrane protein II [Klebsiella oxytoca]
gi|37624582|gb|AAQ96087.1| outer membrane protein II [Klebsiella oxytoca]
Length = 162
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + S G S V GL++ V DI+ Y+++ N D
Sbjct: 17 DSKGNYASTGVSRSEHDTGVSPVFAGGLEWAVTRDIATRLEYQWV----------NNIGD 66
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + SLG++ F
Sbjct: 67 AGTVGTRPDNGMLSLGVSYRF 87
>gi|294788472|ref|ZP_06753715.1| hypothetical protein HMPREF9021_00863 [Simonsiella muelleri ATCC
29453]
gi|294483903|gb|EFG31587.1| hypothetical protein HMPREF9021_00863 [Simonsiella muelleri ATCC
29453]
Length = 348
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 53/188 (28%), Gaps = 34/188 (18%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG---INCHTTAAKD 115
+G+H + NR YN G ++G +Q +V G
Sbjct: 190 IGMHTEHMDANGKQPAFYNRGIYNDSSRTVTG-QVGVGLQFNPYVGGEVYFEGGKNKKYT 248
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+T K + G L G + D + I+ G +
Sbjct: 249 STTGTEQKVNRRVLGS-RLILGTNADAKVRIFTKVGVAAVH------------------- 288
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
D V G+G Y + S+ Y + V N + +H
Sbjct: 289 -QDDFHPQWVWGLGSSYKITDKTSIRVDYDHNIKRSPHVYYDNMRFS--------KSHYF 339
Query: 235 SLGINMHF 242
LG+ HF
Sbjct: 340 GLGLQHHF 347
>gi|152994028|ref|YP_001359749.1| hypothetical protein SUN_2458 [Sulfurovum sp. NBC37-1]
gi|151425889|dbj|BAF73392.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 199
Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 70/192 (36%), Gaps = 35/192 (18%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-----EDFVFGINCHT 110
G YVGL ++ + T + N L +++G+ + FG+N
Sbjct: 38 GIYVGLAFGNIFVN-------DDYTDEEISSNALVLQIGYQYNKYIAFEGRYNFGLNTSY 90
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + +G +K Y + + +Y + G+GG + +
Sbjct: 91 KPGSTGNIIDDYNDDVSSWGTY-IKPMYPIGNFTLYALLGYGGLMLKNLEKG-------- 141
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
D + S+ G+G Y ++ ++SL A Y ++ ++ D +
Sbjct: 142 ------DAYESAFQWGLGAKYNLSENLSLFADYIFL--------YNDTGFDYRAQLDDID 187
Query: 231 AHIASLGINMHF 242
+ I +LG++ F
Sbjct: 188 SDIWTLGVSYKF 199
>gi|14578718|gb|AAK68966.1| major outer membrane protein [Erwinia rhapontici]
Length = 149
Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 30/89 (33%), Gaps = 10/89 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + N+ + G S + +G++Y V + + Y+++
Sbjct: 4 YTRLGGMVWRAELNPNANGTRISEPDTGVSPLAAVGVEYAVTKNWATRLDYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMH 241
N D V + + S+G++
Sbjct: 58 ----NNIGDAGTVGASPDNSMLSVGVSYR 82
>gi|262395084|ref|YP_003286938.1| outer membrane protein A [Vibrio sp. Ex25]
gi|262338678|gb|ACY52473.1| outer membrane protein A precursor [Vibrio sp. Ex25]
Length = 187
Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 57/187 (30%), Gaps = 29/187 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG + + + + I+ + ++ +
Sbjct: 30 GVYVGANYGY----------LKVDGQDDFDDDSDAIQGLVGYRFNPYLALEGGYIDFGSY 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + + + A + D + +Y GG + A +
Sbjct: 80 GNNLANAETD-GYTAALKVTAPIA-DRVDLYAKGGQMWYSTDYNV-----------AGFQ 126
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ V G G+ + V + ++A Y + +++ N +N K + + AS
Sbjct: 127 GNKDDEGVFAGAGVGFKVTDNFLVNAEYMWYDVELNAENVANG------ASTKTDFNQAS 180
Query: 236 LGINMHF 242
LG+ F
Sbjct: 181 LGVEYRF 187
>gi|153213818|ref|ZP_01949026.1| outer membrane protein OmpA [Vibrio cholerae 1587]
gi|229524210|ref|ZP_04413615.1| outer membrane protein A precursor [Vibrio cholerae bv. albensis
VL426]
gi|124115742|gb|EAY34562.1| outer membrane protein OmpA [Vibrio cholerae 1587]
gi|229337791|gb|EEO02808.1| outer membrane protein A precursor [Vibrio cholerae bv. albensis
VL426]
Length = 321
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 53/186 (28%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + + + ++ LG Q + + +
Sbjct: 24 YVGGKVGKSWLDDACLAGQSCEDDDQVVGAFLG------YQANKW-LSLEAGYDYLGKFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
EK + K + + +YG G
Sbjct: 77 AAGLNDEKVQAV-TLAPKLSIPLTEGIALYGKVGGAYVDYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S + GL++ N+++++ Y+ +D+ + +A A+L
Sbjct: 117 SKDDYSYLGAAGLEFNTNHNVTMRLEYQ-------------NLTDINNDTLRASAETATL 163
Query: 237 GINMHF 242
GI F
Sbjct: 164 GIAYKF 169
>gi|148555915|ref|YP_001263497.1| hypothetical protein Swit_3008 [Sphingomonas wittichii RW1]
gi|148501105|gb|ABQ69359.1| hypothetical protein Swit_3008 [Sphingomonas wittichii RW1]
Length = 172
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 50/173 (28%), Gaps = 26/173 (15%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF-GINCHTTAA 113
+G YVG + T G G+N+ + F G+ +
Sbjct: 24 AGPYVGGGV-----TLDNVQGSGALEGVGFSGVGATAFAGYNLPVGASTFAGVEANIDLN 78
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D+ + V + GY + DS +Y G+ +
Sbjct: 79 TADAGG----IEAKWGWGVGARFGYKLNDSTALYARAGYARGKIEVLGS----------- 123
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
G G V G GL+ V +SL A + + +NN V
Sbjct: 124 ----SGWGDGVRYGAGLETRVTDSVSLRAEFTQTNYESDIINNQGTLGIVFGF 172
>gi|269965193|ref|ZP_06179327.1| putative outer membrane protein A [Vibrio alginolyticus 40B]
gi|269830179|gb|EEZ84406.1| putative outer membrane protein A [Vibrio alginolyticus 40B]
Length = 187
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 22/183 (12%), Positives = 59/183 (32%), Gaps = 25/183 (13%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G+++ Y + + + ++ +G + ++ + +
Sbjct: 30 GVYVGANYGYLKVDGQDDFDDDSDVIQGLVG------YRFNPYLALEGGYIDFGSYGNNL 83
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ + + A + D + +Y GG A + +
Sbjct: 84 ANAETD-GYTAALKVTAPIA-DRVDLYAKGGQMWYSTDYDV-----------AGFQGNKD 130
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
V G G+ + V + ++A Y + +++ N +N + + + + ASLG+
Sbjct: 131 DEGVFAGAGVGFKVTDNFLVNAEYMWYDVELNAENVANG------ANTETDFNQASLGVE 184
Query: 240 MHF 242
F
Sbjct: 185 YRF 187
>gi|229528782|ref|ZP_04418172.1| outer membrane protein A precursor [Vibrio cholerae 12129(1)]
gi|229332556|gb|EEN98042.1| outer membrane protein A precursor [Vibrio cholerae 12129(1)]
gi|327484732|gb|AEA79139.1| Outer membrane protein A precursor [Vibrio cholerae LMA3894-4]
Length = 321
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 52/186 (27%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + + + ++ LG Q + + +
Sbjct: 24 YVGGKVGKSWLDDACLAGQSCEDDDQVVGAFLG------YQANKW-LSLEAGYDYLGKFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
EK + K + + +YG G
Sbjct: 77 AVGLNDEKVQAV-TLAPKLSIPLTEGIALYGKVGGAYVDYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S + GL++ N+++++ Y+ +D+ + A A+L
Sbjct: 117 SKDDYSYLGAAGLEFNTNHNVTMRLEYQ-------------NLTDINNDIVRARAETATL 163
Query: 237 GINMHF 242
GI F
Sbjct: 164 GIAYKF 169
>gi|254418948|ref|ZP_05032672.1| OmpA family protein [Brevundimonas sp. BAL3]
gi|196185125|gb|EDX80101.1| OmpA family protein [Brevundimonas sp. BAL3]
Length = 385
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 25/216 (11%), Positives = 55/216 (25%), Gaps = 30/216 (13%)
Query: 56 GNYVGLHISR---LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
G Y + + T Y LG+ ++ + +
Sbjct: 27 GWYGAIDAGYHMIDDINAESSTTGANWNYEVNDGWAAFARLGYRF-NPNWRVELEGGYRS 85
Query: 113 AKDDSTFYRLKEKY---------------------FIYGDVVLKAGYSVDSLLIYGMGGF 151
+ + + +V+ GY + + G
Sbjct: 86 GDIGTVRAVSGTQGLCNLTPATGGCFSPEGDIESATLMANVIYDFGYEAWGIRPFVGLGA 145
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----P 207
G V + + ++ D + GL + V ++ +YRY+
Sbjct: 146 GVNRVTTDTNGNLRANRGATFTADDDSTEFAAQAIAGLAWAVGDRTNIDLTYRYLTGDAS 205
Query: 208 HHIHSVNNSNAKSDVERVDRKGN-AHIASLGINMHF 242
+V + D + +H +LG+ F
Sbjct: 206 FASTTVGTGVGATSFGEWDGDYDQSHTVTLGLRYSF 241
>gi|94497343|ref|ZP_01303914.1| OmpA/MotB [Sphingomonas sp. SKA58]
gi|94423206|gb|EAT08236.1| OmpA/MotB [Sphingomonas sp. SKA58]
Length = 358
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 48/195 (24%), Gaps = 17/195 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN------IQLEDFVFGINCHT 110
YVG+ L T + + G++ F
Sbjct: 26 WYVGVDAGVL-LVEDQDLTFDAVPPGGAAVPSIDYHKGYDFDANIGYDFGGFRLEAEAAY 84
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
AK D + ++ LL +G G V
Sbjct: 85 KRAKIDFDKTGGGFGGAASA-----LSFMLNGLLDFGPDD--GLQGFVGGGVGVSRGKLA 137
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV---NNSNAKSDVERVDR 227
+ G + G+ Y V ++ +S YR+ + S +
Sbjct: 138 SDIVNDSDTGFAWQAIAGVRYPVTNNVDVSLKYRFFNQDDIKLIPAYQSIYGQAGSNAET 197
Query: 228 KGNAHIASLGINMHF 242
K H LG+ +F
Sbjct: 198 KLRTHSLLLGLTYNF 212
>gi|89899133|ref|YP_521604.1| OmpW [Rhodoferax ferrireducens T118]
gi|89343870|gb|ABD68073.1| OmpW [Rhodoferax ferrireducens T118]
Length = 233
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 40/120 (33%), Gaps = 5/120 (4%)
Query: 128 IYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVL 185
+ V+ + ++ V ++ Y G + D + + + + S +
Sbjct: 114 WFPTVLARYTFTGVPTVRPYVGVGVTYTFFTDEEVTTGYTAALQGSSSSMKLEDSWSPYV 173
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV---ERVDRKGNAHIASLGINMHF 242
+G++Y ++ + ++ Y + + RVD K I + I F
Sbjct: 174 RLGVEYPIDKNWIVNVEYSTFQIKSTATVVTQTPGLGPIPRRVDIKDTPQIFGVTIGYRF 233
>gi|15642211|ref|NP_231844.1| outer membrane protein OmpA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586239|ref|ZP_01676029.1| outer membrane protein OmpA [Vibrio cholerae 2740-80]
gi|121726579|ref|ZP_01679828.1| outer membrane protein OmpA [Vibrio cholerae V52]
gi|147673624|ref|YP_001217730.1| outer membrane protein OmpA [Vibrio cholerae O395]
gi|153817076|ref|ZP_01969743.1| outer membrane protein OmpA [Vibrio cholerae NCTC 8457]
gi|153820798|ref|ZP_01973465.1| outer membrane protein OmpA [Vibrio cholerae B33]
gi|153825329|ref|ZP_01977996.1| outer membrane protein OmpA [Vibrio cholerae MZO-2]
gi|153829325|ref|ZP_01981992.1| outer membrane protein OmpA [Vibrio cholerae 623-39]
gi|227082337|ref|YP_002810888.1| outer membrane protein OmpA [Vibrio cholerae M66-2]
gi|229507710|ref|ZP_04397215.1| outer membrane protein A precursor [Vibrio cholerae BX 330286]
gi|229512095|ref|ZP_04401574.1| outer membrane protein A precursor [Vibrio cholerae B33]
gi|229519230|ref|ZP_04408673.1| outer membrane protein A precursor [Vibrio cholerae RC9]
gi|229607214|ref|YP_002877862.1| outer membrane protein A precursor [Vibrio cholerae MJ-1236]
gi|254225790|ref|ZP_04919395.1| outer membrane protein OmpA [Vibrio cholerae V51]
gi|254849343|ref|ZP_05238693.1| outer membrane protein OmpA [Vibrio cholerae MO10]
gi|255747088|ref|ZP_05421033.1| outer membrane protein A precursor [Vibrio cholera CIRS 101]
gi|262161368|ref|ZP_06030478.1| outer membrane protein A precursor [Vibrio cholerae INDRE 91/1]
gi|262167761|ref|ZP_06035463.1| outer membrane protein A precursor [Vibrio cholerae RC27]
gi|298500409|ref|ZP_07010214.1| outer membrane protein OmpA [Vibrio cholerae MAK 757]
gi|2641145|gb|AAB86826.1| putative outer membrane porin [Vibrio cholerae O395]
gi|9656770|gb|AAF95357.1| outer membrane protein OmpA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121549505|gb|EAX59531.1| outer membrane protein OmpA [Vibrio cholerae 2740-80]
gi|121631032|gb|EAX63411.1| outer membrane protein OmpA [Vibrio cholerae V52]
gi|125621696|gb|EAZ50025.1| outer membrane protein OmpA [Vibrio cholerae V51]
gi|126512344|gb|EAZ74938.1| outer membrane protein OmpA [Vibrio cholerae NCTC 8457]
gi|126521590|gb|EAZ78813.1| outer membrane protein OmpA [Vibrio cholerae B33]
gi|146315507|gb|ABQ20046.1| outer membrane protein OmpA [Vibrio cholerae O395]
gi|148875166|gb|EDL73301.1| outer membrane protein OmpA [Vibrio cholerae 623-39]
gi|149741013|gb|EDM55082.1| outer membrane protein OmpA [Vibrio cholerae MZO-2]
gi|227010225|gb|ACP06437.1| outer membrane protein OmpA [Vibrio cholerae M66-2]
gi|227014109|gb|ACP10319.1| outer membrane protein OmpA [Vibrio cholerae O395]
gi|229343919|gb|EEO08894.1| outer membrane protein A precursor [Vibrio cholerae RC9]
gi|229352060|gb|EEO17001.1| outer membrane protein A precursor [Vibrio cholerae B33]
gi|229355215|gb|EEO20136.1| outer membrane protein A precursor [Vibrio cholerae BX 330286]
gi|229369869|gb|ACQ60292.1| outer membrane protein A precursor [Vibrio cholerae MJ-1236]
gi|254845048|gb|EET23462.1| outer membrane protein OmpA [Vibrio cholerae MO10]
gi|255735490|gb|EET90890.1| outer membrane protein A precursor [Vibrio cholera CIRS 101]
gi|262023826|gb|EEY42525.1| outer membrane protein A precursor [Vibrio cholerae RC27]
gi|262028679|gb|EEY47333.1| outer membrane protein A precursor [Vibrio cholerae INDRE 91/1]
gi|297541102|gb|EFH77156.1| outer membrane protein OmpA [Vibrio cholerae MAK 757]
Length = 321
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 52/186 (27%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + + + ++ LG Q + + +
Sbjct: 24 YVGGKVGKSWLDDACLAGQSCEDDDQVVGAFLG------YQANKW-LSLEAGYDYLGKFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
EK + K + + +YG G
Sbjct: 77 AAGLNDEKVQAV-TLAPKLSIPLTEGIALYGKVGGAYVDYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S + GL++ N+++++ Y+ +D+ + A A+L
Sbjct: 117 SKDDYSYLGAAGLEFNTNHNVTMRLEYQ-------------NLTDINNDIVRARAETATL 163
Query: 237 GINMHF 242
GI F
Sbjct: 164 GIAYKF 169
>gi|307294285|ref|ZP_07574129.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
gi|306880436|gb|EFN11653.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
Length = 358
Score = 44.0 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 48/185 (25%), Gaps = 22/185 (11%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
+ T P D ++++ F A+ D
Sbjct: 47 GNAGVASNTIPNVDYHKGFDGDAVIG----------YDFGGFRLEAEAGYKRAEVDLDKS 96
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+G + ++ LL +G G V N G
Sbjct: 97 G-------FGGAASALSFMLNGLLDFGPDD--GLQGFVGGGVGVSRGKLANDLVNDSDTG 147
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYI---PHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ G+ Y + ++ +S YR+ + + VD K H +G
Sbjct: 148 FAWQAIAGVRYPLTSNLDVSLKYRFFNQDDIKLVPAYTTIGGPAGSSVDTKLRTHSLLMG 207
Query: 238 INMHF 242
+ +F
Sbjct: 208 LTYNF 212
>gi|296113973|ref|YP_003627911.1| Opa-like protein A [Moraxella catarrhalis RH4]
gi|295921667|gb|ADG62018.1| Opa-like protein A [Moraxella catarrhalis RH4]
Length = 235
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 59/203 (29%), Gaps = 27/203 (13%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG------INCH 109
G YV + D G GI G + L + IN
Sbjct: 44 GYYVQADLGYSNLEAKYNDNRPNDNKLEDKGLGYGISFGKDTDLARYALDYTNYGKINSS 103
Query: 110 TTAAKDDSTFYRLKEKYFIYG-DVVLKAGYSVDSLLIY-----GMGGFGGAYVIDSSLEK 163
T +T + + + L A Y D++ + G S++
Sbjct: 104 YTYQPQTNTNTSITSSGELKAQSLGLSAIYDFDTVSGFTPYAGARVGINQIKSTVSTVTT 163
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA--SYRYIPHHIHSVNNSNAKSD 221
S S+ + + + G Y +N +S+ A Y Y+ K D
Sbjct: 164 TTSAQSRTTHSQKQENKVGFGVLAGAQYAINPQLSVDAGVEYNYL-----------GKYD 212
Query: 222 VERVDRKGNAHI--ASLGINMHF 242
D K AH +G+ +F
Sbjct: 213 KLDTDSKLKAHQYGVKVGLRHNF 235
>gi|167031565|ref|YP_001666796.1| OmpW family protein [Pseudomonas putida GB-1]
gi|166858053|gb|ABY96460.1| OmpW family protein [Pseudomonas putida GB-1]
Length = 227
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D L + D + +G+DYM+ ++ ++A
Sbjct: 127 KFQPYAGVGINYTLFFDEDLSSARKQQGFSNLKLQDS--IGIAGQLGMDYMITDNLLVNA 184
Query: 202 SYRYIPHHIHSVNNSNA--KSDVERVDRKGNAHIASLGINMHF 242
S Y+ + N +VD + + +G+ F
Sbjct: 185 SVWYVDIDTKASVNGPTALGYSKTKVDVDVDPWVYMVGLGYKF 227
>gi|6735516|emb|CAB69081.1| outer membrane protein [Pseudomonas putida]
Length = 230
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 75/242 (30%), Gaps = 22/242 (9%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG-LHI 63
A+ + ++ + + ++Y Y + +G L++
Sbjct: 7 KKLAMSILATSFVLGGASAWSGEIYSTETAGYNQGDWVASFNMSKVYVDET---LGSLNV 63
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK 123
+ + ++ + + + +N+ L+ FV GI + S +
Sbjct: 64 GGA----TVPNAAVSIGNDTTVSFDISYFISNNVALDFFV-GIPAKAKFQGEKSISALGR 118
Query: 124 EKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
YG +L Y D L Y G G + D + + S +
Sbjct: 119 VSEVDYGPAILSLQYHFDNFERLYPYVGLGVGRVFFFDKTDGALTSFDI--------KDK 170
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ + +GL Y L++ RYIP A +++ I SLG +
Sbjct: 171 WAPAVQVGLRYDFGNSWMLNSDVRYIPFKTDVSGTLGAAPVSTKIEIDP--FILSLGASY 228
Query: 241 HF 242
F
Sbjct: 229 KF 230
>gi|94314805|ref|YP_588014.1| OmpW family outer membrane protein [Cupriavidus metallidurans CH34]
gi|93358657|gb|ABF12745.1| outer membrane protein, OmpW family [Cupriavidus metallidurans
CH34]
Length = 245
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 11/102 (10%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y G ++ ++ + D L +G+DY V + L+
Sbjct: 155 GTFRPYVGAGV--------NVTRIWGADIAGNTLGLDRWSVGPALQVGMDYKVTKNWFLN 206
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ I + N + + + + N + S G+ F
Sbjct: 207 VDVKKIWISSNVYANGTGQ---KVSNVQLNPWLFSAGVGYRF 245
>gi|197335419|ref|YP_002157050.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197316909|gb|ACH66356.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 206
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 53/192 (27%), Gaps = 20/192 (10%)
Query: 55 SGNYVGLHIS-RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
SG Y G+ Y N N + LG+ Q V GI T
Sbjct: 31 SGFYAGVGFGSFGYSEEDSWGYNNNPISAEADGNSTKVYLGY--QFNKIV-GIEGTYTDY 87
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ GY+ + + +G+ G + S
Sbjct: 88 GTAKAKVGNYSMKPSSISLAANLGYTFKNGIRPFGLVGMSSLDLNQS------------E 135
Query: 173 KGRFDGHGSSVVLGIGLDY--MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ D G++ G G++Y + A+Y + + ++ + +
Sbjct: 136 ELLTDDSGAAFKFGFGVEYTPKALGGVQFRAAYEMDMYAVEYLDYQSGAGLTTETNL-YA 194
Query: 231 AHIASLGINMHF 242
+G + F
Sbjct: 195 LDSLYVGASYKF 206
>gi|59712862|ref|YP_205638.1| hypothetical protein VF_2255 [Vibrio fischeri ES114]
gi|59480963|gb|AAW86750.1| hypothetical protein VF_2255 [Vibrio fischeri ES114]
Length = 206
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 20/192 (10%)
Query: 55 SGNYVGLHIS-RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
SG Y G+ Y N N + LG+ Q V GI T
Sbjct: 31 SGFYAGVGFGSFGYSEEDSWGYSNNPISAEADGNSTKVYLGY--QFNKIV-GIEGTYTNY 87
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + GY+ + + +G+ G + S
Sbjct: 88 GEAKAKVGNYSMKPSSISLAANLGYTFKNGIRPFGLVGMSSLDLNQS------------E 135
Query: 173 KGRFDGHGSSVVLGIGLDY--MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ D G++ G G++Y + A+Y + + ++ + +
Sbjct: 136 ELLTDDSGAAFKFGFGVEYTPKALGGVQFRAAYEMDMYAVEYLDYQSGSGLTTETNL-YA 194
Query: 231 AHIASLGINMHF 242
LG + F
Sbjct: 195 LDSLYLGASYKF 206
>gi|262404049|ref|ZP_06080604.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262349081|gb|EEY98219.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 335
Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 75/238 (31%), Gaps = 59/238 (24%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
LF + FL++ + + ++ K +D+ +Y IW G Y GL S
Sbjct: 2 KIKILFIINFLAVNSWAATGSSPFFMGVKYGYQLASDDAYKYSTPTGSIW-GIYAGLQFS 60
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
+ +G+ E +N T+ ++
Sbjct: 61 PSWSWD----------------------IGYQYHDE-----LNADMTSVTVNTWLIESAL 93
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
+Y Y D+L +YG G + + + + + G S +
Sbjct: 94 RYNW---------YLQDNLSLYGRFGAAYWNM----------EKMQPSLNQVSATGLSPL 134
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G+ Y + +SLS Y+YI S K ++H A + + F
Sbjct: 135 GEVGVSYNLTPRLSLSTGYQYIDRIGKSNTG------------KYDSHAALISLYYTF 180
>gi|222112451|ref|YP_002554715.1| ompw family protein [Acidovorax ebreus TPSY]
gi|221731895|gb|ACM34715.1| OmpW family protein [Acidovorax ebreus TPSY]
Length = 224
Score = 44.0 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 59/187 (31%), Gaps = 19/187 (10%)
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLED-----FVFGINCHTTAAKDDSTFYRLK 123
+ L++ T+ + + + G N L D G+ + D + K
Sbjct: 44 SGDLSEPSFPHTHVDVGADTA-LTGGINYMLTDHWALDLPVGLPFQHSFYGDGAIAGVGK 102
Query: 124 EKYFIYGDVVL----KAGYSVDSLLIYGMGGFGGAYV----IDSSLEKVESDNSKNAKGR 175
L + G + +L Y G + ++L V + N
Sbjct: 103 LGQTKVVPATLFAQYRFGEAQAALRPYLGLGVTYSKFFKNRSTAALTAVTGGSPANPTTA 162
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ +G + + L +Y Y + + S+ +S + + N ++ +
Sbjct: 163 HIDNKWGFTAQVGFVWNFSERWFLDVAY-YKSFLKTTAHLSSGQS----IGMRLNPNVVA 217
Query: 236 LGINMHF 242
+G+ F
Sbjct: 218 VGVGYRF 224
>gi|315122523|ref|YP_004063012.1| hypothetical protein CKC_03875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495925|gb|ADR52524.1| hypothetical protein CKC_03875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 229
Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 34/215 (15%), Positives = 72/215 (33%), Gaps = 12/215 (5%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
L+ +FL + A + Y + + A N W G+Y+ + ++
Sbjct: 17 KLLYSSLFLGFFSSSAMAANNSY-----EYYPPALNYQS----SIPKWKGSYISVDMANA 67
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
D++ S+ G + Q V+G + + +
Sbjct: 68 ALVGK--DSVGIIRDRSVHAALNKFTFGFDSQEGTLVYGASIGYENHFTNGQIVNAAFQN 125
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
++L++G++ D+ + L V S S + D V
Sbjct: 126 SAI-SLMLRSGFTFDNANSSLFQNTVIYGAVGVRLRDVSSLKSVADVLKLDLTKLDQVYA 184
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+G++ + +S+ A YR + ++ SNAK+
Sbjct: 185 VGIEKKLASMLSMHAEYRIVDSINSAMTLSNAKTG 219
>gi|320577088|gb|ADW54053.1| outer membrane protein A [Sodalis glossinidius]
Length = 155
Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 10/76 (13%)
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
DN + G S + +GL+Y + + Y+++ N D V
Sbjct: 57 DNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNIGDAGTVG 106
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 107 TRPDNSMLSVGVSYRF 122
>gi|14578730|gb|AAK68972.1| major outer membrane protein [Brenneria salicis]
gi|14578738|gb|AAK68976.1| major outer membrane protein [Brenneria salicis]
gi|14578740|gb|AAK68977.1| major outer membrane protein [Brenneria salicis]
Length = 147
Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 32/91 (35%), Gaps = 12/91 (13%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSV--VLGIGLDYMVNYDISLSASYRYIPHHIH 211
Y + ++ + + V + IG++Y + D + Y+++
Sbjct: 3 VYTRLGGMVWRTDSHAAQGGFDRNNDDTGVFSLAAIGVEYAFDRDWAARVDYQWV----- 57
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D V + + + S+GI+ F
Sbjct: 58 -----SNIGDAGTVGARPDNLMMSVGISYRF 83
>gi|148259194|ref|YP_001233321.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|146400875|gb|ABQ29402.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
Length = 361
Score = 44.0 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 22/205 (10%), Positives = 53/205 (25%), Gaps = 26/205 (12%)
Query: 55 SGNYVGLHISRL--------YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
+G YV L + + P D + +G+ F +
Sbjct: 29 TGPYVSLGLGYNIMGSRKVKSISTPYGDFASGARTLFHNGFTGEASVGYGFGNG-FRVEL 87
Query: 107 NCHT--------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ ++KY + + V + Y G G ++
Sbjct: 88 EGDYFHNQAAKVDGNGAQAVVSGTEQKYGFMANALYDFDVGVPYVYPYVGAGVGYQWLQW 147
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPH-HIHSVNN 215
+ + + + GL + + +S + YRY+ +
Sbjct: 148 RNAGVTGARFNGTPGA------FAYQAIAGLAFPIPAAPGLSATVEYRYMRTMGSDNYRA 201
Query: 216 SNAKSDVERVDRKGNAHIASLGINM 240
+ + V ++ +G+
Sbjct: 202 TVGATPVTMKVGDEGNNMLMVGLRY 226
>gi|91225116|ref|ZP_01260338.1| putative outer membrane protein A [Vibrio alginolyticus 12G01]
gi|91190059|gb|EAS76330.1| putative outer membrane protein A [Vibrio alginolyticus 12G01]
Length = 187
Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 22/183 (12%), Positives = 60/183 (32%), Gaps = 25/183 (13%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G+++ Y + + + ++ +G + ++ + +
Sbjct: 30 GVYVGANYGYLKVDGQDDFDDDSDVIQGLVG------YRFNPYLALEGGYIDFGSYGNNL 83
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ + + A + D + +Y GG + A + +
Sbjct: 84 ANAETD-GYTAALKVTAPIA-DRVDLYAKGGQMWYSTDYNV-----------AGFQGNKD 130
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
V G G+ + V + ++A Y + +++ N +N + + + + ASLG+
Sbjct: 131 DEGVFAGAGVGFKVTDNFLVNAEYMWYDVELNAENVANG------ANTETDFNQASLGVE 184
Query: 240 MHF 242
F
Sbjct: 185 YRF 187
>gi|325276585|ref|ZP_08142327.1| outer membrane protein W [Pseudomonas sp. TJI-51]
gi|324098264|gb|EGB96368.1| outer membrane protein W [Pseudomonas sp. TJI-51]
Length = 227
Score = 44.0 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D L + D + +G+DYM+ ++ ++A
Sbjct: 127 KFQPYAGVGINYTLFFDEDLSSARKQQGFSNLKLQDS--VGIAGQLGMDYMLTDNLLVNA 184
Query: 202 SYRYIPHHIHSVNNSNA--KSDVERVDRKGNAHIASLGINMHF 242
+ Y+ + N +VD + + +G+ F
Sbjct: 185 AVWYVDIDTKASVNGPTALGYSKTKVDVDVDPWVYMVGLGYKF 227
>gi|308271281|emb|CBX27889.1| hypothetical protein N47_G32130 [uncultured Desulfobacterium sp.]
Length = 403
Score = 43.6 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 40/132 (30%), Gaps = 18/132 (13%)
Query: 85 LPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSL 143
GI LG+++ +GI D Y + + L
Sbjct: 51 DGITPGINLGYDLTKN---WGIEGSFNYIDSDRKGYSDSSVSGYLYKMDGIYNITNFGKL 107
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
+ Y G GG + N G+ V G GL Y + +I+L
Sbjct: 108 VPYLAAGAGGITL--------------NPADGDTGNNFLVNYGAGLKYFLTDNIALRGDV 153
Query: 204 RYIPHHIHSVNN 215
R++ S NN
Sbjct: 154 RHVIPLNESNNN 165
>gi|192362340|ref|YP_001984114.1| OmpA-like transmembrane domain-containing protein [Cellvibrio
japonicus Ueda107]
gi|190688505|gb|ACE86183.1| OmpA-like transmembrane domain protein [Cellvibrio japonicus
Ueda107]
Length = 181
Score = 43.6 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 45/159 (28%), Gaps = 17/159 (10%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAA 113
SG Y+G + + ++ I G+N + + G+
Sbjct: 26 SGFYIGGSVGQSSLEAEFDTNAKLNEDDT----AYKIVAGYNFGVLPLLDLGVEVDYRDF 81
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + D+ AG + ++G G+ A V
Sbjct: 82 GKFKGSEAIGSADIVAVDLFGVAGLNFGPFGVFGKIGYSDADVDAVVENI---------- 131
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ S++ GIG + + ++L A Y
Sbjct: 132 -KASSSESNMAYGIGAKFQL-GSLALRAEYEKFDMDDVD 168
>gi|13473321|ref|NP_104888.1| hypothetical protein mll3877 [Mesorhizobium loti MAFF303099]
gi|14024070|dbj|BAB50674.1| mll3877 [Mesorhizobium loti MAFF303099]
Length = 257
Score = 43.6 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 59/233 (25%), Gaps = 27/233 (11%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGI 91
D + + SG Y+ +S L + D + + +
Sbjct: 24 AADYDPPIYADQAPDYVPVEVGSGWYLRGDVSYLAQKSFKNDDFAFTPASFDEKEDPIFA 83
Query: 92 ELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG------YSVDSLL- 144
+G D+ + + + + + Y+ +L
Sbjct: 84 SIGFGYHFNDY-LRADLNLGYLPGNKIGIGYDDSLSVVPPATSTVASADLKNYAYSLMLN 142
Query: 145 ------------IYGMGGFGGAYVIDSSLEKVESDNSKNA-----KGRFDGHGSSVVLGI 187
Y GG G ++N + + L
Sbjct: 143 AYVDLGTYVGITPYLGGGVGIVQSTRRLSANYFTNNGDPTDDFVQTDDKTKYSLAYTLNA 202
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
GL Y V+ ++S+ Y+Y + A V + + H LG+
Sbjct: 203 GLAYQVSKNVSVDLGYQYFSAPDAEY-VTAASLTSFPVHKGISNHQIKLGLRY 254
>gi|84389432|ref|ZP_00991238.1| outer membrane protein OmpW [Vibrio splendidus 12B01]
gi|84376947|gb|EAP93820.1| outer membrane protein OmpW [Vibrio splendidus 12B01]
Length = 213
Score = 43.6 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 35/107 (32%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D SL + D + IG+DYM+N
Sbjct: 111 FGQANSDFRPYVGAGINYTVFFDESLNANGKNAGLTDVSLDDSW--GLAANIGMDYMINE 168
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D L+AS Y + + D + D + + +G +F
Sbjct: 169 DWFLNASVWYADIGTTATYKTAT--DTFKTDVDIDPWVFMIGGGYNF 213
>gi|332704554|ref|ZP_08424642.1| porin opacity type [Desulfovibrio africanus str. Walvis Bay]
gi|332554703|gb|EGJ51747.1| porin opacity type [Desulfovibrio africanus str. Walvis Bay]
Length = 233
Score = 43.6 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 31/210 (14%), Positives = 60/210 (28%), Gaps = 28/210 (13%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGL-------GIELGHN-IQLEDFVFGIN 107
G Y + D T N++ + G+ LG + + + +
Sbjct: 29 GFYASVKAGAGVAQADDLDLEVMDTSNTVDVDDESDVVPVVGLALGWDFYKSSELPVRVE 88
Query: 108 CHTTAAKD-------DSTFYRLKEKYFIYGDVVLKA----GY----SVDSLLIYGMGGFG 152
T D D T +V GY + + G G
Sbjct: 89 LEYTHMNDADFSWQGDVTVLGFTTNERFEAEVSADVLMLNGYYDFRNRSRFTPFVQAGLG 148
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
A + + ++ + + +G G+ + + ++L ASYR+
Sbjct: 149 LAILKTDVKRITDGFDAGTE--KDTNVNFAADIGAGVGFALTEQLTLDASYRFAYLGPAG 206
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V+ A + + H LG+ F
Sbjct: 207 VDVELAF---YKTEADIWRHDMLLGLRYAF 233
>gi|326402347|ref|YP_004282428.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
gi|325049208|dbj|BAJ79546.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
Length = 361
Score = 43.6 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 22/205 (10%), Positives = 53/205 (25%), Gaps = 26/205 (12%)
Query: 55 SGNYVGLHISRL--------YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
+G YV L + + P D + +G+ F +
Sbjct: 29 TGPYVSLGLGYNIMGSRKVKSISTPYGDFASGARTLFHNGFTGEASVGYGFGNG-FRVEL 87
Query: 107 NCHT--------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ ++KY + + V + Y G G ++
Sbjct: 88 EGDYFHNQAAKVDGNGAQAVVSGTEQKYGFMANALYDFDVGVPYVYPYVGAGIGYQWLQW 147
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYIPH-HIHSVNN 215
+ + + + GL + + +S + YRY+ +
Sbjct: 148 RNAGVTGARFNGTPGA------FAYQAIAGLAFPIPAAPGLSATVEYRYMRTMGSDNYRA 201
Query: 216 SNAKSDVERVDRKGNAHIASLGINM 240
+ + V ++ +G+
Sbjct: 202 TVGATPVTMKVGDEGNNMLMVGLRY 226
>gi|14578732|gb|AAK68973.1| major outer membrane protein [Brenneria salicis]
Length = 147
Score = 43.6 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ D G S + IG++Y + D + Y+++
Sbjct: 4 YTRLGGMVWRTDSHAAQGGFDRNNDDTGVSPLAAIGVEYAFDRDWAARVDYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D V + + + S+GI F
Sbjct: 58 ----SNIGDAGTVGVRPDNLVMSVGIFYRF 83
>gi|296448060|ref|ZP_06889963.1| porin opacity type [Methylosinus trichosporium OB3b]
gi|296254417|gb|EFH01541.1| porin opacity type [Methylosinus trichosporium OB3b]
Length = 312
Score = 43.6 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 41/144 (28%), Gaps = 7/144 (4%)
Query: 97 IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD--SLLIYGMGGFGGA 154
+ L ++ FG+ A +++ R Y Y+ D Y + +
Sbjct: 169 VDLGNW-FGL-TPYVGAGVGASYVRTSGGVNYYKTSDGSP-YAADLSPTSGYPLAWYNIQ 225
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
++ + + + L G Y ++ + + YRY+
Sbjct: 226 NGNRENVNLPYAPQYWDRNLSKSSWKFAWALFAGASYDLSENFKIDIGYRYLNSGK--YT 283
Query: 215 NSNAKSDVERVDRKGNAHIASLGI 238
S +H +G+
Sbjct: 284 GLAGFSGATPKSYDLISHEVRVGV 307
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 24/234 (10%), Positives = 53/234 (22%), Gaps = 22/234 (9%)
Query: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
MNF G+ AL L + + A D+ P D E +G Y+
Sbjct: 1 MNFPGFRALLCCAALGVAAGGPARAADM--PFFSPPEAAIDTEAELG-------TGWYLR 51
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
+ I ++ + +G Q + +
Sbjct: 52 GDVGY--SNITSPQVIADIINSTARSGSISGSVGAGYQYNSW-LRTELALDRSVIRPNAT 108
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ +D+ Y G A ++ +
Sbjct: 109 GTPFWCPY----TAR---PLDTAARYDSSGVETAPSHPLGYAYDPNETCQARTTGNMSRI 161
Query: 181 SSVV---LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ + + +G + + + Y+ + D +
Sbjct: 162 TGLFNAYVDLGNWFGLTPYVGAGVGASYVRTSGGVNYYKTSDGSPYAADLSPTS 215
>gi|261211335|ref|ZP_05925623.1| outer membrane protein A precursor [Vibrio sp. RC341]
gi|260839290|gb|EEX65916.1| outer membrane protein A precursor [Vibrio sp. RC341]
Length = 322
Score = 43.6 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 55/186 (29%), Gaps = 41/186 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG I + + L D LG +G+ + + + +
Sbjct: 24 YVGGKIGKSW----LDDACQSGQPCDKDDTTLGAFVGY--EANKW-LSLEAGYDYLGKFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
EK + K + + +YG G
Sbjct: 77 AAGLADEKVKAI-TLAPKLSLPLTEGIALYGKVGGAFVDYG------------------- 116
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S + GL++ N+++++ Y+ N ++ +D+ R + A+L
Sbjct: 117 SKDDYSYLGAAGLEFNTNHNVTMRLEYQ---------NITDINNDIVRASGE----SATL 163
Query: 237 GINMHF 242
G+ F
Sbjct: 164 GVVYKF 169
>gi|114561917|ref|YP_749430.1| OmpA domain-containing protein [Shewanella frigidimarina NCIMB 400]
gi|114333210|gb|ABI70592.1| OmpA domain protein transmembrane region-containing protein
[Shewanella frigidimarina NCIMB 400]
Length = 191
Score = 43.6 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 54/184 (29%), Gaps = 27/184 (14%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G+++ Y + + N +L +G + ++ + S
Sbjct: 34 GVYVGANYGYLKVDGEDDFDDDNDVLQGLVG------YRFNKYLA---LEGSYIDFGSYG 84
Query: 120 YRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
L LK + + + +Y GG + +
Sbjct: 85 NNLSSAETDGYTAGLKVTLPIAERIELYAKGGQLWYSTDYDVVGFSG-----------NK 133
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
V G G+ + V ++A Y + I+ N SN D + + AS+G+
Sbjct: 134 DDEGVFAGAGVAFKVTDRFLINAEYTWYDAEINLDNVSNG------SDTETDFKQASIGV 187
Query: 239 NMHF 242
F
Sbjct: 188 EYRF 191
>gi|307296790|ref|ZP_07576608.1| OmpW family protein [Sphingobium chlorophenolicum L-1]
gi|306877703|gb|EFN08929.1| OmpW family protein [Sphingobium chlorophenolicum L-1]
Length = 220
Score = 43.6 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 2/102 (1%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y G + + +G+D +N + L+
Sbjct: 121 GKIRPYVGAGVNYTLFYNEKASNALEGAVGATRVHMSDS-FGWAGQVGVDIDLNERMFLN 179
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+YI + S A + V+RV + + + +G+ M F
Sbjct: 180 FDVKYIDIDTTA-RLSTAGAGVQRVKMELDPFVFGVGVGMKF 220
>gi|261251462|ref|ZP_05944036.1| outer membrane protein W precursor [Vibrio orientalis CIP 102891]
gi|260938335|gb|EEX94323.1| outer membrane protein W precursor [Vibrio orientalis CIP 102891]
Length = 215
Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + +L Y G D L + + D + G+DYM+N
Sbjct: 113 FGEAESNLRPYVGAGINYTVFFDEELNSTGTGAGLSNLSLDDSW--GLAANAGVDYMLND 170
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D L+AS Y + + + D + + +G F
Sbjct: 171 DWFLNASVWYADIETTAKYTAGGQ--EYSTDVTIDPWVFMIGGGYKF 215
>gi|218678361|ref|ZP_03526258.1| outer membrane protein [Rhizobium etli CIAT 894]
Length = 96
Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 8/74 (10%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
EA + G W G Y+G + + + + G + G+N
Sbjct: 31 PEAPVAQDAPVKPAGNWEGFYLGGAGTY--------NMGSFGSDRHTYGFGGQVFTGYNW 82
Query: 98 QLEDFVFGINCHTT 111
Q V+G+
Sbjct: 83 QQGQIVYGVESDLG 96
>gi|319957468|ref|YP_004168731.1| hypothetical protein Nitsa_1736 [Nitratifractor salsuginis DSM
16511]
gi|319419872|gb|ADV46982.1| hypothetical protein Nitsa_1736 [Nitratifractor salsuginis DSM
16511]
Length = 215
Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 53/187 (28%), Gaps = 12/187 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G + D L G I
Sbjct: 40 LYIGGGVGARSLYADKLDWGFDTILGQDKVADLFAVAGCRFHK---YLAIEGRI-----G 91
Query: 117 STFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+F+ Y + LK Y V + +YG+ G+G + N G
Sbjct: 92 KSFFERDYSDSWYASIFLKPIYDVTNDFSVYGLLGYGYTHAEKYDGHVPAP---ANEIGD 148
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
S G+G Y +N +L A Y ++ H+ D + K + +
Sbjct: 149 TIVSTGSFQWGLGASYDINEKWTLFADYVWMLHNKSIPPQKLYNYDPPKRWHKLSIDNIN 208
Query: 236 LGINMHF 242
+G+ HF
Sbjct: 209 IGLLYHF 215
>gi|260751226|gb|ACX48919.1| cellulase [Streptomyces sp. GS11]
gi|307574878|gb|ADN52664.1| cellulase [uncultured bacterium]
Length = 340
Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 51/192 (26%), Gaps = 46/192 (23%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV---FGIN--CHTTA 112
Y+G + + L D + LG++ +V +G++ TA
Sbjct: 42 YMGGKVGY----NSLNDACYLNEPCDDDSFAASMHLGYS--FNKYVAAEYGVDYLGDFTA 95
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + K + DS ++ G D
Sbjct: 96 NFKKPGLNTVDGDL-WALTLAPKFNLPLTDSWNLFAKVGAAYMMAGDEKDFVPTGS---- 150
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGN 230
+G +Y +NY+ SL A Y RY + +
Sbjct: 151 ---------------LGAEYQINYNWSLRAEYQRYQDMSDDVIE-------------DMD 182
Query: 231 AHIASLGINMHF 242
+ +G N F
Sbjct: 183 SDFFGIGFNYKF 194
>gi|196019022|ref|XP_002118912.1| hypothetical protein TRIADDRAFT_62899 [Trichoplax adhaerens]
gi|190577756|gb|EDV18602.1| hypothetical protein TRIADDRAFT_62899 [Trichoplax adhaerens]
Length = 193
Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 28/207 (13%), Positives = 53/207 (25%), Gaps = 45/207 (21%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC---------HTTAAKD 115
LA GIE G+ + E+F FG+ A
Sbjct: 3 YAKGEVGLAMPKKVDGDKLKKSVIFGIEGGYKM-NENFRFGLGIGMLNNVKPKDVPAGTT 61
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
L + Y D+ + Y G G + + S
Sbjct: 62 APKASSLFGEVNAYYDIG-----EFNGFTPYLTAGVGVSRNKLKNNVSSSSGGGTATLSS 116
Query: 176 FD--------------------GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ +G+G Y ++ + ++ +YRY
Sbjct: 117 TTPAGKKTGAGKIVTVGSDSKTKTNFAWNVGLGAMYNIDPEFAVDLTYRYRDLGKV---- 172
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
++ + K +H ++G+ F
Sbjct: 173 ------MKGDNDKLKSHNVTVGLVYKF 193
>gi|323498434|ref|ZP_08103430.1| outer membrane protein OmpA [Vibrio sinaloensis DSM 21326]
gi|323316507|gb|EGA69522.1| outer membrane protein OmpA [Vibrio sinaloensis DSM 21326]
Length = 322
Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 46/178 (25%), Gaps = 29/178 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKD 115
YVG + + T + LG G+ I
Sbjct: 23 FYVGGKAGKSWLDDACTSTTVDC---DTESSTLGAFAGYEMWDF----LSIEAGYDYLGR 75
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+K Y + K + D++ +YG G
Sbjct: 76 FDGEGLDNDKVEAY-TLAPKLNLPITDAISLYGKFGGAFVNYG----------------- 117
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
S + G+++ N +I++ Y+ + + + + S K +H
Sbjct: 118 --SEEDYSYLGAAGVEFDSNENIAVRLEYQTLTDINNDLVRAKGDSATLAFVYKFGSH 173
>gi|157370914|ref|YP_001478903.1| outer membrane protein W [Serratia proteamaculans 568]
gi|157322678|gb|ABV41775.1| OmpW family protein [Serratia proteamaculans 568]
Length = 223
Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 53/179 (29%), Gaps = 15/179 (8%)
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT-------AAKDDSTFYRLKEK 125
D + + ++++ LG+ G+ + G+ + +
Sbjct: 51 DDVLGQGSFSADNNTQLGLTFGYMVTDN---IGVELLAATPFRHKVGLNGGAVNGNIATV 107
Query: 126 YFIYGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
+ + ++ + G D L Y G D + D V
Sbjct: 108 HDLPPTLMAQYYFGDKQDKLRPYLGLGVNYTTFFDEKFNDNGKSAGLSNLSLKDSW--GV 165
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GLDY ++ L+ S ++ + +A + +D + + + G F
Sbjct: 166 AAQAGLDYNLDEHWMLNMSVWWMNIETKA-RFDDADGNHHSIDTRLDPWVFMFGAGYRF 223
>gi|84386140|ref|ZP_00989169.1| hypothetical protein V12B01_18141 [Vibrio splendidus 12B01]
gi|84378910|gb|EAP95764.1| hypothetical protein V12B01_18141 [Vibrio splendidus 12B01]
Length = 198
Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 50/184 (27%), Gaps = 19/184 (10%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G ++ + +D G + G+ + + G+
Sbjct: 33 GAYVGGGLSAYQGSDADGAPNL-DSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYK 86
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+ V GY+ D+ + + + G + + + G D
Sbjct: 87 NSTDKLSPTSISVSANVGYTFDNTIRPFVLAGLSSVDLNAN-----------SGAGYNDD 135
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ G+G++Y ++L + S + D + S G
Sbjct: 136 SGTGFHFGVGVEYTPVEHLTLRLISQ-ADAVSVDDYYIGNNSSFKTDDHTLAFNSVSFGG 194
Query: 239 NMHF 242
+ F
Sbjct: 195 SYDF 198
>gi|254497317|ref|ZP_05110125.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
gi|254353545|gb|EET12272.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
Length = 212
Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 18/157 (11%), Positives = 45/157 (28%), Gaps = 7/157 (4%)
Query: 88 GLGIELGHNIQLEDFV-FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
G+G+ + QL + + R + K + AG + +
Sbjct: 61 GIGVAAASDAQLSGVIDINGVADVNTYSYKVSHVRAEFKGKLIA-----AGCRIVQPYLS 115
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRY 205
G G G + D +++ + + + + +G G+ MV + + Y +
Sbjct: 116 GSLGVGFNHSHDYFPTTIDAVVYPPSYFNTNSNVSFAYTVGAGIQKMVTPNWQVGVGYEF 175
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + ++ F
Sbjct: 176 ADWGKNYLGGDGNLLGQGPGAPHLYTNELLFSLSYLF 212
>gi|93007277|ref|YP_581714.1| OmpA-like transmembrane region [Psychrobacter cryohalolentis K5]
gi|92394955|gb|ABE76230.1| OmpA-like transmembrane region [Psychrobacter cryohalolentis K5]
Length = 179
Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 44/147 (29%), Gaps = 20/147 (13%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + AD P G+ G+N FG+ + D
Sbjct: 36 YVGAKVGQFDLDVDGAD----------DPTAYGVYAGYNFDPN---FGMEAEFVGSDDAD 82
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ + Y+ + +Y G G A +
Sbjct: 83 YRGGDIDAKTYGAYGTYR--YAFPNTGLYAKGKLGVARTEIEATGTS-----PAGFYNGS 135
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYR 204
+S+ G+GL Y VN + S+ A Y
Sbjct: 136 NKDTSLAGGVGLGYSVNPNFSVEAEYD 162
>gi|220904106|ref|YP_002479418.1| heat resistant agglutinin 1 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868405|gb|ACL48740.1| heat resistant agglutinin 1 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 225
Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 55/179 (30%), Gaps = 15/179 (8%)
Query: 76 INRKTYNSLLPNGLGIEL-GHNI---QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG- 130
N G G++ Q+ I + S + G
Sbjct: 50 AGSGVDNYNQFTLGGAMALGYDFWPQQMLPLRAEIEFALRGNSEKSWSDGGSNLRDVKGV 109
Query: 131 ----DVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
+ + + L Y GG G A+ K + N A RF +
Sbjct: 110 WNNSTLFANLFWDFRNDSALTPYVGGGIGLAFNYTGYTFKDNNGNKFEADDRF--TNFAW 167
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
LG G+ Y +N +L ASYR++ + V+ S V + + +G+ F
Sbjct: 168 NLGAGVSYDINESFTLDASYRFVGLGYNEVS-STVNGIKYEVGNRPYNNEFMIGLRYGF 225
>gi|14578686|gb|AAK68950.1| major outer membrane protein [Brenneria rubrifaciens]
Length = 148
Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 29/90 (32%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ D G S + +G++Y + + ++ +Y+++
Sbjct: 4 YTRLGGIVWRADSHAAQSGVDRNNDDTGVSPLAALGIEYGFDKNWAVRVNYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D V + + S G++ F
Sbjct: 58 ----SNIGDAGTVGARPDNMFMSAGVSYRF 83
>gi|268597476|ref|ZP_06131643.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268551264|gb|EEZ46283.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
Length = 86
Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 13/90 (14%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
G + ++ + + + + G+ + + ++L A YRY
Sbjct: 10 GKNIKSTTYDNISPQTQNAHHQSDSIRRVGLGVIAGVGFDITPKLTLDAGYRYHNWGRLE 69
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 70 -------------NTRFKTHEASLGVRYRF 86
>gi|311696345|gb|ADP99218.1| OmpA domain protein transmembrane region-containing protein [marine
bacterium HP15]
Length = 192
Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 55/198 (27%), Gaps = 31/198 (15%)
Query: 46 YQDDEYGIWSGNYV-GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
Q + SG YV G + D N LL +G Q F F
Sbjct: 25 AQSNVERDQSGPYVSGSYGGYKSHGGEFEDE------NDLLGAAVG------YQFNPF-F 71
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ + + V + + DS +YG G
Sbjct: 72 ALEAEYIDFGNFGEDDVEGKLKGFGLSAVGRLPLT-DSFGVYGKAG-----------AFA 119
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + S +G G+D+ V ++ A Y + ++V+ + +
Sbjct: 120 SAFDVDAFNESETYDEVSPFVGAGVDFRVTPALTAFAEY-----NRYNVDIDKEDFNGQV 174
Query: 225 VDRKGNAHIASLGINMHF 242
+ +G+ F
Sbjct: 175 TNSGPEFDTGRVGLKYQF 192
>gi|269138879|ref|YP_003295580.1| outer membrane protein W [Edwardsiella tarda EIB202]
gi|267984540|gb|ACY84369.1| outer membrane protein W [Edwardsiella tarda EIB202]
gi|304558865|gb|ADM41529.1| Outer membrane protein W precursor [Edwardsiella tarda FL6-60]
Length = 214
Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 3/107 (2%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + D L Y G ++S ++ + + D V GLDYMV+
Sbjct: 111 FGRAEDKLRPYLGVGVNYTTFFNNSFDQNATSLGLHDLKATDSW--GVAGQAGLDYMVSE 168
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++AS YI V ++ + ++ N + G F
Sbjct: 169 NWMINASVWYINIDTK-VKFRDSADNQHSINTNINPWVFMFGAGYRF 214
>gi|260769389|ref|ZP_05878322.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
gi|260614727|gb|EEX39913.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
Length = 316
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 21/186 (11%), Positives = 50/186 (26%), Gaps = 40/186 (21%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G+ I + + + + G+ G+++ + + +
Sbjct: 23 YLGVKIGKSWLSEQCQSSEENC---VTDNPAYGLFAGYHV---NDTLALESSYEDLGTFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + + K + + D Y G A
Sbjct: 77 VKSLHSDTIRLL-TLAPKLTFPIVDDYRWYVKAGMAYANTSG------------------ 117
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S G++Y + ++L Y + +DV + + A++
Sbjct: 118 -HSDGSWFAATGVEYDLRPQMTLRVEY-------------SVATDVNDGTNRYTMNGAAV 163
Query: 237 GINMHF 242
GI F
Sbjct: 164 GIRYAF 169
>gi|282599634|ref|ZP_05971282.2| outer membrane protein OprG [Providencia rustigianii DSM 4541]
gi|282568020|gb|EFB73555.1| outer membrane protein OprG [Providencia rustigianii DSM 4541]
Length = 220
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G D L Y G + D + G+DYM++
Sbjct: 118 FGSKEDKLRPYLGAGINYTFFFDEKFNNTGKAAGLSDLDLSSSW--GFAAQAGMDYMLDE 175
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+AS ++ + + +VD + + + LG+ F
Sbjct: 176 NWMLNASVWWMNIETDVKFKAGGEQ--YKVDTRLDPFVFMLGVGYRF 220
>gi|119776561|ref|YP_929301.1| outer membrane protein [Shewanella amazonensis SB2B]
gi|119769061|gb|ABM01632.1| outer membrane protein, putative [Shewanella amazonensis SB2B]
Length = 189
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 49/189 (25%), Gaps = 25/189 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G YVG I + S G G G+N + FG+ + A
Sbjct: 25 TGFYVGGAI--------NQVKASGDGEGSSDGVGFGAYGGYNF---NEWFGLEANL-FAS 72
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D + K Y + + G V+
Sbjct: 73 GDLGEDGVDVGAGAL-TFTPKFTYHFNDTFSAFAKVGVASMAVVVDY-----------GP 120
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
D G + G+G++ + ++L SY +
Sbjct: 121 FDADYTGWGLTWGVGVNAALTEKLNLRLSYDETRGDLDEDGFWFDNDYYNGEIDNVKISQ 180
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 181 ISLGLHYQF 189
>gi|270262125|ref|ZP_06190397.1| outer membrane protein W [Serratia odorifera 4Rx13]
gi|270044001|gb|EFA17093.1| outer membrane protein W [Serratia odorifera 4Rx13]
Length = 218
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 53/179 (29%), Gaps = 15/179 (8%)
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT-------AAKDDSTFYRLKEK 125
D + + ++N+ LG+ G+ + G+ + + +
Sbjct: 46 DDVLGQGSFNADNNTQLGLTFGYMVTDN---IGVELLAATPFRHKVSLNGAAVNGNIATV 102
Query: 126 YFIYGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
+ ++ + G D L Y G D + D V
Sbjct: 103 RDLPPSLMAQYYFGDKQDKLRPYLGLGVNYTTFFDEKFNDNGKGAGLSNLSLKDSW--GV 160
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GLDY ++ L+ S ++ + +A + +D + + + G F
Sbjct: 161 AAQAGLDYNLDEHWMLNMSVWWMNIETKT-RFDDANGNHHSIDTRLDPWVFMFGAGYRF 218
>gi|117574268|gb|ABK41118.1| OlpA [Moraxella catarrhalis]
gi|117574270|gb|ABK41119.1| OlpA [Moraxella catarrhalis 7169]
Length = 215
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 59/202 (29%), Gaps = 27/202 (13%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG------INCH 109
G YV + D G GI G + L + IN
Sbjct: 26 GYYVQADLGYSNLEAKYNDNRPNDNKLEDKGLGYGISFGKDTDLARYALDYKNYGKINSS 85
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY-----GMGGFGGAYVIDSSLEKV 164
T +T + + L A Y D++ + G S++
Sbjct: 86 YTYQPQTNTSITSSGELKAQ-SLGLSAIYDFDTVSGFTPYAGARVGINQIKSTVSTVTTT 144
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA--SYRYIPHHIHSVNNSNAKSDV 222
+ S+ + + + G Y +N +S+ A Y Y+ K D
Sbjct: 145 AAAQSRTTHSQKQENKVGFGVLAGAQYAINPQLSVDAGVEYNYL-----------GKYDK 193
Query: 223 ERVDRKGNAHI--ASLGINMHF 242
D K AH A +G+ +F
Sbjct: 194 LDTDSKLKAHQYGAKVGLRYNF 215
>gi|90418983|ref|ZP_01226894.1| putative outer surface protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337063|gb|EAS50768.1| putative outer surface protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 282
Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 45/182 (24%), Gaps = 15/182 (8%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
D I ++ G G + + G+ A D TF
Sbjct: 107 YWSADLDGGDRIGACFDSATASGGAGGQAFCDSTSGASATGLELMANAYADLGTFVGFT- 165
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
G D + + GA + S + A +
Sbjct: 166 --PYVGAGAGAVKVKYDDVNVSDGCTLAGAACVGSFYNS------EGAYDGGSSWRFAYS 217
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVN------NSNAKSDVERVDRKGNAHIASLGI 238
L G+ Y ++ ++ + YR++ +N + + D H I
Sbjct: 218 LMAGVSYDISRNLKVDLGYRFLDVDGGDAYSYSGDVAANGQLGLSAEDDGFQRHSVQAAI 277
Query: 239 NM 240
Sbjct: 278 RY 279
>gi|37676931|ref|NP_937327.1| hypothetical protein VVA1271 [Vibrio vulnificus YJ016]
gi|320159022|ref|YP_004191400.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|326424294|ref|NP_762742.2| outer membrane protein [Vibrio vulnificus CMCP6]
gi|37201475|dbj|BAC97297.1| hypothetical protein [Vibrio vulnificus YJ016]
gi|319934334|gb|ADV89197.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|319999680|gb|AAO07732.2| Outer membrane protein [Vibrio vulnificus CMCP6]
Length = 193
Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 55/198 (27%), Gaps = 26/198 (13%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
+G Y+G + T N L + G+ + + GI
Sbjct: 19 AHADTKVNGFYLGAGAGSTEFDSDQSVT------GKADGNALKLIAGYQF---NRIVGIE 69
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
+ D + GY+ + L YG+ G + +S+
Sbjct: 70 AQYSKYGDVKFSTPQNTWTPTALSLNANLGYTFANGLRPYGIVGLSALDLSEST------ 123
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYM--VNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
K G+++ G+GL+Y ++ Y I + + N E
Sbjct: 124 ------KTLESDSGAAIHFGLGLEYAPPALNGLAFRVGYDAEIFGISTEYDLNGTKVTED 177
Query: 225 VDRKGNAHIASLGINMHF 242
V A G F
Sbjct: 178 VAYSLGA--FYAGATYKF 193
>gi|149377587|ref|ZP_01895326.1| OmpA domain protein transmembrane region-containing protein
[Marinobacter algicola DG893]
gi|149358129|gb|EDM46612.1| OmpA domain protein transmembrane region-containing protein
[Marinobacter algicola DG893]
Length = 192
Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 65/201 (32%), Gaps = 33/201 (16%)
Query: 44 VEYQDDEYGIWSGNYV-GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF 102
V QD+ SG Y+ G + D + G+ LG+ Q F
Sbjct: 23 VSAQDNTDRDSSGVYLSGSYGGYKSHGGEFDD----------ENDLFGVGLGY--QFNQF 70
Query: 103 VFGINCHT-TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
F + K K G ++ + + D+ +Y G + +
Sbjct: 71 -FALEAEYIDFGNFGDDDVDGKLKGTSLG-LMGRLPLT-DTFGVYAKAGAFASSFDVDAF 127
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
++ E+ + N +G G+D+ V ++ A Y + ++V+ +
Sbjct: 128 DESETYDEVNPF-----------VGAGVDFRVTEQLTAFAEY-----NRYNVDIDEDDFN 171
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + +G+ F
Sbjct: 172 GQVTNDGPDFDTGRVGMRFQF 192
>gi|315181920|gb|ADT88833.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
Length = 316
Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 21/186 (11%), Positives = 50/186 (26%), Gaps = 40/186 (21%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G+ I + + + + G+ G+++ + + +
Sbjct: 23 YLGVKIGKSWLSEQCQSSEENC---VTDNPAYGLFAGYHV---NDTLALESSYEDLGTFT 76
Query: 118 TFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + + K + + D Y G A
Sbjct: 77 VKSLHSDTIRLL-TLAPKLTFPIVDDYRWYAKAGMAYANTSG------------------ 117
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S G++Y + ++L Y + +DV + + A++
Sbjct: 118 -HSDGSWFAATGVEYDLRPQMTLRVEY-------------SVATDVNDGTNRYTMNGAAV 163
Query: 237 GINMHF 242
GI F
Sbjct: 164 GIRYAF 169
>gi|295097419|emb|CBK86509.1| Opacity protein and related surface antigens [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 203
Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 57/197 (28%), Gaps = 36/197 (18%)
Query: 57 NYVGLHISRLY------ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
Y G + + +T + + G G+ G+ Q+ + +
Sbjct: 28 WYSGAKFGWSHYFDTNMGSKAFENTYSDHFDFNHDNVGGGVYTGY--QITPW-LAVEGGY 84
Query: 111 TAAKD----DSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVE 165
+ + K + LKA Y++ IYG G G
Sbjct: 85 DYLGNMQIKGQHGAGAQMKTQGL-QMSLKASYALSSDWDIYGRAGAMGYRAESDVSGHNR 143
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ G + +G +Y N + + Y+++ + +V ++
Sbjct: 144 FE-----------TGVRPLAAVGTEYAFNKNWAGRLEYQWV----------SNVGNVNQI 182
Query: 226 DRKGNAHIASLGINMHF 242
+ + G++ F
Sbjct: 183 GVSSDLSSVTAGLSYRF 199
>gi|220935698|ref|YP_002514597.1| outer membrane protein W [Thioalkalivibrio sp. HL-EbGR7]
gi|219997008|gb|ACL73610.1| outer membrane protein W [Thioalkalivibrio sp. HL-EbGR7]
Length = 218
Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 7/104 (6%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
Y G ++ + + L G+D+ VN
Sbjct: 122 DFGQWRPYVGAGI-----NYTTFFDEKGKGNFAGADVSLKDSWGWALQAGMDFDVNDRWF 176
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ AS YI + + A D +VD + + +G + F
Sbjct: 177 VGASAYYIAIDTTATIRAGA--DTVKVDVDIDPWVLMVGGGLRF 218
>gi|170719743|ref|YP_001747431.1| OmpW family protein [Pseudomonas putida W619]
gi|169757746|gb|ACA71062.1| OmpW family protein [Pseudomonas putida W619]
Length = 227
Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D L + D + +G+DYM+ ++ ++A
Sbjct: 127 RFQPYAGIGINYTLFFDEDLSSARKQQGFSNLKLQDS--VGIAGQLGMDYMLTDNLLVNA 184
Query: 202 SYRYIPHHIHSVNNSNA--KSDVERVDRKGNAHIASLGINMHF 242
S Y+ + + + +V+ + + + +G+ F
Sbjct: 185 SVWYVDIDTKATVDGPSALGYSKTKVNVEVDPWVYMVGLGYKF 227
>gi|119774508|ref|YP_927248.1| outer membrane protein W [Shewanella amazonensis SB2B]
gi|119767008|gb|ABL99578.1| outer membrane protein OmpW, putative [Shewanella amazonensis SB2B]
Length = 213
Score = 43.3 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 28/107 (26%), Gaps = 5/107 (4%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D+ + +G DY N
Sbjct: 112 FGNANSAFRPYVGVGVNYTNFFDTEFTNDLDGALTDLSLS---TSVGWAAQVGFDYSFNK 168
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+AS Y N V D ++ S+G F
Sbjct: 169 NWMLNASVWYADISTDVKFNLGDTPVVVETDIDPWVYMVSVG--YKF 213
>gi|171463649|ref|YP_001797762.1| hypothetical protein Pnec_0960 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193187|gb|ACB44148.1| conserved hypothetical protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 243
Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 66/235 (28%), Gaps = 44/235 (18%)
Query: 42 NNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG----------- 90
+ Q + W G Y + + +++ + P+ +
Sbjct: 19 TSANAQSAKANAWEGFYGQVGVGYGMFNPSVSNGTASIPAGVVAPSAVAATTTATNINNI 78
Query: 91 ------IELGHNIQLE-DFVFGINCHT---------------TAAKDDSTFYRLKEKYFI 128
+ G+N + ++V G+ + + +
Sbjct: 79 STGLVNLAAGYNFAINSNYVLGLGVAYYPGASSSATSTMNIVAPSGTTFDSGQARYNVKN 138
Query: 129 YGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
V L GY +D+ L+Y G+ GA + S+ + + + LG+
Sbjct: 139 LYSVTLNPGYVIDNDRLVYAKVGYTGATIGLSTASVPYTIT----------NLTGYTLGL 188
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G MV I Y + + +++ KG +G F
Sbjct: 189 GYKQMVTASIYAFGEVNYAFYGNKTASSTAYGVIPVTTTIKGTGTDFLVGAGYRF 243
>gi|148358258|ref|YP_001249465.1| hypothetical protein LPC_0120 [Legionella pneumophila str. Corby]
gi|148280031|gb|ABQ54119.1| hypothetical protein LPC_0120 [Legionella pneumophila str. Corby]
Length = 260
Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 10/108 (9%), Positives = 25/108 (23%), Gaps = 3/108 (2%)
Query: 136 AGYSVDSLLIYGMG--GFGGAYVIDSSLEKVESDNSKNAKGRFDGH-GSSVVLGIGLDYM 192
G + + Y G G D + + + +G G+ M
Sbjct: 150 IGSAFTPVQPYLSGSFGIAFNNAHDYRTLSINQFLFPAPWFASNTTYAFAYSVGAGVQKM 209
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+N + + Y + + + ++
Sbjct: 210 LNRNWQVGVGYEFADLGKSYLGGDGVNITKGPRLTHLYNNQLLFSVSY 257
>gi|332967863|gb|EGK06959.1| hypothetical protein HMPREF0476_1953 [Kingella kingae ATCC 23330]
Length = 185
Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 49/185 (26%), Gaps = 27/185 (14%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
VG + + K N+ + + + D S
Sbjct: 27 VGAGVGIDTGVTNYTNVEGSKNSNATN-----LVGSYGFEFPDTPLVGQAELKYKLGSSK 81
Query: 119 FYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
K + G+ V + L+ Y G+ + + G F
Sbjct: 82 IDDAGTKSKHLWNANYVQGFRVTNDLMPYAKVGYATGKFTGT-----------DEDGAFS 130
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ G+G Y V ++ + A Y + + D K ++ ++G
Sbjct: 131 VRARGITYGVGAKYAVAPNVEVGAEYVRSNLKVRDCD----------SDCKVKSNNVNVG 180
Query: 238 INMHF 242
+ F
Sbjct: 181 VGYRF 185
>gi|320577114|gb|ADW54066.1| outer membrane protein A [Sodalis glossinidius]
Length = 126
Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 10/76 (13%)
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
DN + G S + +GL+Y + + Y+++ N D V
Sbjct: 43 DNGNAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWV----------NNIGDAGTVG 92
Query: 227 RKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 93 TRPDNSMLSVGVSYRF 108
>gi|288802114|ref|ZP_06407555.1| hypothetical protein HMPREF0660_00560 [Prevotella melaninogenica
D18]
gi|288335549|gb|EFC73983.1| hypothetical protein HMPREF0660_00560 [Prevotella melaninogenica
D18]
Length = 449
Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 14/103 (13%)
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
IY GG A +D + S +G G+D+ + I +
Sbjct: 59 WSIYAEGGLSWA-----------TDVWYQNLDAKRSYKLSPAVGGGIDFTIRPWIRIGGE 107
Query: 203 YRYIPHHIH-SVNNSNAKSDVERV--DRKGNAHIASLGINMHF 242
Y + + +N N +S +V + N H LG+ ++F
Sbjct: 108 YLWSRYRREQRFSNLNTQSMPVKVYGNYMMNFHNVKLGLQLNF 150
>gi|323494327|ref|ZP_08099439.1| outer membrane protein W [Vibrio brasiliensis LMG 20546]
gi|323311490|gb|EGA64642.1| outer membrane protein W [Vibrio brasiliensis LMG 20546]
Length = 234
Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D L + + D + +G+DYM+N
Sbjct: 132 FGEAESDIRPYVGAGINYTVFFDEELNGTGTAAGLSNLSLDDSW--GLAANVGVDYMLND 189
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D L+AS Y + + + D + + +G F
Sbjct: 190 DWFLNASVWYADIETTAKYTAGGQ--EYSTDVTIDPWVFMIGGGYKF 234
>gi|206562099|ref|YP_002232862.1| opacity family porin protein [Burkholderia cenocepacia J2315]
gi|198038139|emb|CAR54089.1| opacity family porin protein [Burkholderia cenocepacia J2315]
Length = 238
Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 70/246 (28%), Gaps = 36/246 (14%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
L+++ + A + P + D +G Y + ++ +
Sbjct: 11 LALLFSGAAFADTVAAPETKKTADAGD-------------AGYYATGRVIGAFDNAVNME 57
Query: 75 TINRKTYNSLLPNGLGIEL----GHNIQLEDFVFGINCHTTAAKDDSTF---YRLKEKYF 127
+ + + + G + G Q + + + ++
Sbjct: 58 LTSPRVASRVGGPETGSNVTGSLGLGYQFGNG-WRAEGEYVFKRTNNFTSYWAPFDANAN 116
Query: 128 IYGDVVLKA---GY---SVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ + GY + +YG G G A V + ++
Sbjct: 117 EFHVSAQRLMLNGYKDFDLGRGFSVYGTLGIGVAIVSADGWQTNDTRR----FASKTQTN 172
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD----RKGNAHIASL 236
+ G G+ Y +N S+ YRY+ + + + D K +++ +
Sbjct: 173 LAYSAGAGVSYAINKRFSIDLGYRYVDMGNIETGFNTFANRINARDEQLKSKLSSNEVFI 232
Query: 237 GINMHF 242
G+ F
Sbjct: 233 GLRGRF 238
>gi|148545789|ref|YP_001265891.1| OmpW family protein [Pseudomonas putida F1]
gi|148509847|gb|ABQ76707.1| OmpW family protein [Pseudomonas putida F1]
Length = 227
Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D L + D + +G+DY++ ++ ++A
Sbjct: 127 RFQPYAGVGINYTLFFDEDLSSARKQQGFSNLKLQDS--VGIAGQLGMDYLLTDNLLVNA 184
Query: 202 SYRYIPHHIHSVNNSNA--KSDVERVDRKGNAHIASLGINMHF 242
S Y+ + N +V+ + + +G+ F
Sbjct: 185 SVWYVDIDTKASVNGPTALGYSKTKVNVDVDPWVYMVGLGYKF 227
>gi|52840356|ref|YP_094155.1| hypothetical protein lpg0101 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54293064|ref|YP_125479.1| hypothetical protein lpl0101 [Legionella pneumophila str. Lens]
gi|54296096|ref|YP_122465.1| hypothetical protein lpp0115 [Legionella pneumophila str. Paris]
gi|52627467|gb|AAU26208.1| hypothetical protein lpg0101 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53749881|emb|CAH11263.1| hypothetical protein lpp0115 [Legionella pneumophila str. Paris]
gi|53752896|emb|CAH14331.1| hypothetical protein lpl0101 [Legionella pneumophila str. Lens]
Length = 260
Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 10/108 (9%), Positives = 25/108 (23%), Gaps = 3/108 (2%)
Query: 136 AGYSVDSLLIYGMG--GFGGAYVIDSSLEKVESDNSKNAKGRFDGH-GSSVVLGIGLDYM 192
G + + Y G G D + + + +G G+ M
Sbjct: 150 IGSAFTPVQPYLSGSFGIAFNNAHDYRTLSINQFLFPAPWFASNTTYAFAYSVGAGVQKM 209
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+N + + Y + + + ++
Sbjct: 210 LNRNWQVGVGYEFADLGKSYLGGDGVNITKGPRLTHLYNNQLLFSVSY 257
>gi|307608846|emb|CBW98242.1| hypothetical protein LPW_01011 [Legionella pneumophila 130b]
Length = 260
Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 10/108 (9%), Positives = 25/108 (23%), Gaps = 3/108 (2%)
Query: 136 AGYSVDSLLIYGMG--GFGGAYVIDSSLEKVESDNSKNAKGRFDGH-GSSVVLGIGLDYM 192
G + + Y G G D + + + +G G+ M
Sbjct: 150 IGSAFTPVQPYLSGSFGIAFNNAHDYRTLSINQFLFPAPWFASNTTYAFAYSVGAGVQKM 209
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+N + + Y + + + ++
Sbjct: 210 LNRNWQVGVGYEFADLGKSYLGGDGVNITKGPRLTHLYNNQLLFSVSY 257
>gi|170736597|ref|YP_001777857.1| porin opacity type [Burkholderia cenocepacia MC0-3]
gi|169818785|gb|ACA93367.1| porin opacity type [Burkholderia cenocepacia MC0-3]
Length = 238
Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 70/247 (28%), Gaps = 36/247 (14%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
L+++ + A + +P D +G Y I ++
Sbjct: 10 TLALLFSGAAFADTVAVPETKKTAELGD-------------AGYYATGRIIGAFDNAVNM 56
Query: 74 DTINRKTYNSLLPNGLGIEL----GHNIQLEDFVFGINCHTTAAKDDSTF---YRLKEKY 126
+ + + + + G + G Q + + + ++
Sbjct: 57 ELTSPRVASRVGGPDTGSNVTGSLGLGYQFGNG-WRAEGEYVFKRTNNFTSYWAPFDANA 115
Query: 127 FIYGDVVLKA---GY---SVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ + GY + +YG G G A V + ++
Sbjct: 116 NEFHVSAQRLMLNGYKDFDLGRGFSVYGTLGIGVAIVSADGWQTNDTRR----FASKTQT 171
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD----RKGNAHIAS 235
+ G G+ Y +N S+ YRY+ + + V D K +++
Sbjct: 172 NLAYSAGAGVSYAINKRFSIDLGYRYVDMGNVETGFNTFANRVNARDEQLKSKLSSNEVF 231
Query: 236 LGINMHF 242
+G+ F
Sbjct: 232 IGLRGRF 238
>gi|325204597|gb|ADZ00051.1| opacity protein [Neisseria meningitidis M01-240355]
Length = 222
Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 27/119 (22%), Gaps = 29/119 (24%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK----------------GRFDGHGSSV 183
D Y +V +K +
Sbjct: 117 FDKFKPYIGARVAYGHVKHQVHSVETKTTIVTSKPNGGPVPSSVTKPPYHQSHSISSLGL 176
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ G+ + + ++L YRY + + H SLG+ HF
Sbjct: 177 GVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGVRYHF 222
>gi|296106280|ref|YP_003617980.1| hypothetical protein lpa_01078 [Legionella pneumophila 2300/99
Alcoy]
gi|295648181|gb|ADG24028.1| hypothetical protein lpa_01078 [Legionella pneumophila 2300/99
Alcoy]
Length = 261
Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 26/201 (12%), Positives = 49/201 (24%), Gaps = 35/201 (17%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNG---------LGIELGHNIQLED-FVFG 105
G Y GL +I R + + + G+ + L G
Sbjct: 34 GFYAGLGTGFTTIFSTDEYSIVRPGFGVIRTGIHKVTNSAVLFSGQAGYGVMLNQKTYLG 93
Query: 106 INC-----------HTTAAKDDSTFYRLKEKYFIYGDVV------LKAGYS-VDSLLIYG 147
+ A + GY + L +
Sbjct: 94 GKGSIYYTPMENNNQISFASSRGPNELASGHDNFVRSLKPIYNIDAVLGYEIFPNFLPFV 153
Query: 148 MGGFGGAYVIDS-------SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
G A V + + ++ D + + +GIG +Y V+ + S
Sbjct: 154 EAGVSFANVKHRFVLEGAITNLVTGTVSNYTGGATSDNYNTGYNIGIGANYQVHKNWIFS 213
Query: 201 ASYRYIPHHIHSVNNSNAKSD 221
Y +++ N D
Sbjct: 214 GELVYHDLGTNNLTIPNFTPD 234
>gi|218709617|ref|YP_002417238.1| hypothetical protein VS_1627 [Vibrio splendidus LGP32]
gi|218322636|emb|CAV18807.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 190
Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 59/211 (27%), Gaps = 24/211 (11%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIE 92
K V GI G Y+G + + G +
Sbjct: 3 KSTYLLGLVGLVSLPTFAAGIEGGPYIGAGLG-----VYQDSDTDGGGSLDAENMGYSLY 57
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGF 151
G++ + + GI T D K V GY+ D+ + + + G
Sbjct: 58 GGYHF---NRIVGIELGYTDY-ADYEVVGTKVFSPTSLSVSANVGYTFDNSIRPFVLMGM 113
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + D + GIG++Y +++L + I
Sbjct: 114 SYVDLNARNGAL------------KDDSDAGFHFGIGVEYTPIDNLTLRLISQ--GDGIS 159
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S+ K +R +LG + +F
Sbjct: 160 VDEYSSNKGKNTITNRSLAISTVTLGASYNF 190
>gi|220904319|ref|YP_002479631.1| surface antigen msp4 family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868618|gb|ACL48953.1| surface antigen msp4 family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 223
Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 29/218 (13%), Positives = 66/218 (30%), Gaps = 16/218 (7%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPN----GLGIEL 93
+ + SG Y+GL I + T ++ + +++ + G G +
Sbjct: 8 TVALTMALAVPAFAQNSGFYLGLKFIDSIQSTGNVSTSKGASFFDTGDYSQNTVGGGAFV 67
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLK---------AGYSVDSLL 144
G++ + + + A ++ K+ + + + + +
Sbjct: 68 GYDFYPANDIP-LRAEIEYAIRTNSETDWDAKHGLDATLKGRWNLQTLFLNVYWDFHNDT 126
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+ GG + + + G G+ Y IS +YR
Sbjct: 127 AFTPYIGGGLGMGFIESRYKVEGQGYSGSSTDYNTVFAWNAGAGVSYAFTETISADLAYR 186
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + S A +V A+ SLG+ F
Sbjct: 187 FVGLGYYEHEKSFA-GQKAKVGMAPYANEFSLGVRFTF 223
>gi|325205644|gb|ADZ01097.1| opacity protein [Neisseria meningitidis M04-240196]
Length = 272
Score = 42.9 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 32/101 (31%), Gaps = 15/101 (14%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
IY GA V + K S + G V+ G+G + + ++L
Sbjct: 187 ETTIYTTAPTKGAKVGGTIPNKAISKPPYHESHSTSSLGLGVIAGVG--FDITPKLTLDT 244
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YRY + + H SLG+ HF
Sbjct: 245 GYRYHNWGRLE-------------NTRFKTHEVSLGVRYHF 272
>gi|300112985|ref|YP_003759560.1| hypothetical protein Nwat_0269 [Nitrosococcus watsonii C-113]
gi|299538922|gb|ADJ27239.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
Length = 422
Score = 42.9 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 18/191 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD- 115
Y+ L + T A +++S +G N + +G+ +
Sbjct: 244 GYLSLRGGVAFLTDRNAVP--EASFDSTSGPWPSGSIGMNF---NKHWGMELAGDYGRTQ 298
Query: 116 --DSTFYRLKEKYFIYGDVVLKAGYSV--DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
TF ++ V+ + Y + D L Y + G G + ++ S
Sbjct: 299 LRSPTFGKITGYPIWTISVLGRFRYPLLDDKLSPYILAGPGLGFAEIGDPDQPLSVTGLG 358
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G G+DY V Y+I+L+ + + N+ K + +
Sbjct: 359 GGQDNSIVA---IFGAGVDYFVGYNIALNLEVK-----RAAFFNTQVKINGQSETLSPEF 410
Query: 232 HIASLGINMHF 242
+ GI + F
Sbjct: 411 VSLTAGIRVFF 421
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 11/108 (10%)
Query: 104 FGINCHTTAAKDDSTFYRLKEKYF-----IYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+GI K + K+ G + + + L+ Y +
Sbjct: 87 WGIELAYDYIKTNLLQTSGKKAGDYAATTWLGQLRFRYPLLQERLVPYLLA-----GGGI 141
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
E ++ G D V+G G +Y + +I+L +Y
Sbjct: 142 GIGEFSGREDFSFTGGGSDTVPLG-VVGGGAEYFITDNIALGVEAKYY 188
>gi|226330263|ref|ZP_03805781.1| hypothetical protein PROPEN_04176 [Proteus penneri ATCC 35198]
gi|225201058|gb|EEG83412.1| hypothetical protein PROPEN_04176 [Proteus penneri ATCC 35198]
Length = 211
Score = 42.9 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D + D GLDY ++ + L+
Sbjct: 114 DKLRPYLGAGLNFTTFFDEKFNSAGKGAGLSDLDLKDSW--GFAAQAGLDYNLDKNWMLN 171
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
AS ++ + D + + + + + G+ F
Sbjct: 172 ASVWWMNIETDVKFKAGE--DRQSISTRLDPFVFMFGVGYRF 211
>gi|188994161|ref|YP_001928413.1| hypothetical protein PGN_0297 [Porphyromonas gingivalis ATCC 33277]
gi|188593841|dbj|BAG32816.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 235
Score = 42.9 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 21/182 (11%), Positives = 46/182 (25%), Gaps = 14/182 (7%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIE--LGHNIQLEDFVFGINCHTTAAKDDSTF 119
I + +G+G+E +N +F + +
Sbjct: 34 EIGGGFGAAQ---YFGDANRGLFGSSGVGLELVGRYNY---NFRWAFSAMLDWRTLRGNT 87
Query: 120 YRLKEKYFIYGDVVLKAGYSV------DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + K G + + L Y G S +
Sbjct: 88 DKSGNVFPDFAQADFKVGLTQLHVRSEFNFLPYSDGYKYLGTARLSPYVAAGLSLGFASG 147
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ + G+G+ Y + I++ Y + +++ KS K N
Sbjct: 148 AKGSAFAPGITAGMGVKYKLKPRINVGIEYSFTGLLTDALDALTDKSVWLEDPYKINDSW 207
Query: 234 AS 235
Sbjct: 208 VK 209
>gi|289208298|ref|YP_003460364.1| outer-membrane protein [Thioalkalivibrio sp. K90mix]
gi|288943929|gb|ADC71628.1| putative outer-membrane protein [Thioalkalivibrio sp. K90mix]
Length = 208
Score = 42.9 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 18/137 (13%)
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVE 165
+ T + D ++ ++ V + G V D++L+YG+ G+ V S
Sbjct: 89 DADATVSIDGEGTAGVEARHSYG--VTGRIGGLVSDNVLVYGLLGYQQTEVRSSVRGPGF 146
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ G + +G G++ + + Y + S +
Sbjct: 147 VN------GSDTDRINGPRIGAGVEVQRDTGWFMRGEVSYTAYSSESY---------GDL 191
Query: 226 DRKGNAHIASLGINMHF 242
+ A G+ F
Sbjct: 192 EIDPGATRVQFGLGYRF 208
>gi|296105611|ref|YP_003617311.1| hypothetical protein lpa_00150 [Legionella pneumophila 2300/99
Alcoy]
gi|295647512|gb|ADG23359.1| hypothetical protein lpa_00150 [Legionella pneumophila 2300/99
Alcoy]
Length = 260
Score = 42.9 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 10/108 (9%), Positives = 25/108 (23%), Gaps = 3/108 (2%)
Query: 136 AGYSVDSLLIYGMG--GFGGAYVIDSSLEKVESDNSKNAKGRFDGH-GSSVVLGIGLDYM 192
G + + Y G G D + + + +G G+ M
Sbjct: 150 IGSAFTPVQPYLSGSFGIAFNNAHDYRTLSINQFLFPAPWFASNTTYAFAYSVGAGVQKM 209
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+N + + Y + + + ++
Sbjct: 210 LNRNWQVGVGYEFADLGKSYLGGDGVNITKGPRLTHLYNNQLLFSVSY 257
>gi|225873020|ref|YP_002754479.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
gi|225791412|gb|ACO31502.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
Length = 446
Score = 42.9 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 38/162 (23%), Gaps = 10/162 (6%)
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
N N G I D+ I T + + V
Sbjct: 47 GANAPPGNCHCFAMHGGFFSAGIHFNDW-LSIEGKVTGGHSNDISALGQNLTLTTFTVGP 105
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ + YG FG A+ S N + +G GL+Y +
Sbjct: 106 RFTWHHGRFAPYGEALFGAAWGTGSYF------PRANGTSTTSASSVAYSVGGGLEYELT 159
Query: 195 YDISL---SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+++ A + + N V K
Sbjct: 160 PRMAVLLPDAEFLHTALPNGINGEQNTLEIGAGVVFKFGNRT 201
>gi|194333987|ref|YP_002015847.1| outer surface protein, putative [Prosthecochloris aestuarii DSM
271]
gi|194311805|gb|ACF46200.1| outer surface protein, putative [Prosthecochloris aestuarii DSM
271]
Length = 201
Score = 42.9 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 62/191 (32%), Gaps = 23/191 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y GL + + Y + +I +G G H ++L +F D+
Sbjct: 28 YAGLTVGKAYLNNS---SIKGSNREYSCDDGEGYCYAHGLELGNFRLEGEIGYQKNDFDA 84
Query: 118 TFYRLKEKYFIYG--DVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
++ ++ YS+ ++ G G A + D
Sbjct: 85 IEPGVRTANGDLSILSLLGNGYYSLSAQGSRVMPVISAGVGVANIEFEDEVNAVDD---- 140
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ +G GL Y ++ ++++ YRY + + + + ++
Sbjct: 141 -----SDLVLAYQVGAGLGYKLSESVTVTTMYRYFSTSDAGFDE-----EADDLHVDISS 190
Query: 232 HIASLGINMHF 242
H +G+ ++F
Sbjct: 191 HNIMMGVKVNF 201
>gi|268595126|ref|ZP_06129293.1| predicted protein [Neisseria gonorrhoeae 35/02]
gi|268548515|gb|EEZ43933.1| predicted protein [Neisseria gonorrhoeae 35/02]
Length = 138
Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++N + + G+ + + +++L A YRY
Sbjct: 66 NGAVTTYNTDPKTQNDYQSNSIRRVGLGVIAGIGFDITPNLTLDAGYRYHNWGRLE---- 121
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 122 ---------NTRFKTHEASLGVRYRF 138
>gi|149912563|ref|ZP_01901097.1| hypothetical protein RAZWK3B_01205 [Roseobacter sp. AzwK-3b]
gi|149812969|gb|EDM72795.1| hypothetical protein RAZWK3B_01205 [Roseobacter sp. AzwK-3b]
Length = 227
Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 56/205 (27%), Gaps = 24/205 (11%)
Query: 57 NYVGLHI-------SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC- 108
YVG+ L P++ +++ P G + FG+
Sbjct: 28 LYVGIQSVDNSTLSGTLPGGAPISQSVDWAGKPLDNPFYYGGRAIW-WMDNNIGFGLEGT 86
Query: 109 HTTAAKDDSTFYRLKEKYFIYGD----VVLKAGYSVD-------SLLIYGMGGFGGAYVI 157
H A L F D + Y GG G A
Sbjct: 87 HAKAYASSGDLAALGLSRFELSDGHNIITANVMKRWPGAFAKTPRFTPYVGGGVGVA--- 143
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ S ++ G ++ GL Y +N + +L + Y+ +
Sbjct: 144 -IPHVDAQVIGSPVRTFGYETTGLALRGLAGLKYELNENWALFSEYQVTWSDNDITIDPA 202
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
+ + H + GI+ +F
Sbjct: 203 PGQLAGKASVELVTHAVNFGISYNF 227
>gi|193213486|ref|YP_001999439.1| surface antigen msp4 family protein [Chlorobaculum parvum NCIB
8327]
gi|193086963|gb|ACF12239.1| surface antigen msp4 family protein [Chlorobaculum parvum NCIB
8327]
Length = 229
Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 54/183 (29%), Gaps = 11/183 (6%)
Query: 55 SGNYVGLHISRLYETHP--LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
+GNYV + + + + + + L +G+ + + D+
Sbjct: 25 AGNYVSANAGISWFGDAKLTDNADDEENFCVDLDSGIALTGAYGHDYGDYRIEAELGYQR 84
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAG---------YSVDSLLIYGMGGFGGAYVIDSSLEK 163
+ L + + Y ++ + GA S
Sbjct: 85 NDIAKSIDYLYGSVYDEYSMTGNMSVISLMGNAYYDINLTDDLELFLTAGAGAAFVSFND 144
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
V + + + LG GL Y V ++ L A YRY +++++ D
Sbjct: 145 VGDVDDDFRYDKVTATAFAYQLGAGLSYKVAENLRLEARYRYFATADFTIDDTANFWDDY 204
Query: 224 RVD 226
D
Sbjct: 205 AED 207
>gi|188591914|ref|YP_001796512.1| ompw family virulence-related outer membrane signal peptide protein
[Cupriavidus taiwanensis LMG 19424]
gi|170938288|emb|CAP63273.1| putative virulence-related OUTER MEMBRANE SIGNAL PEPTIDE PROTEIN,
OmpW family [Cupriavidus taiwanensis LMG 19424]
Length = 213
Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 34/102 (33%), Gaps = 13/102 (12%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y G ++ +N N + D L IG+DY + + L+
Sbjct: 125 GTFRPYIGAGLNFTHI--------WGENIANNALQLDSWSVGPALQIGMDYKLTKNWFLN 176
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A +++ DV+ + + S+G+ F
Sbjct: 177 A-----DIKKIWLSSDVKAGDVKVSKVSLDPWLFSMGVGYRF 213
>gi|27382517|ref|NP_774046.1| hypothetical protein bll7406 [Bradyrhizobium japonicum USDA 110]
gi|27355689|dbj|BAC52671.1| bll7406 [Bradyrhizobium japonicum USDA 110]
Length = 300
Score = 42.5 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 29/220 (13%), Positives = 63/220 (28%), Gaps = 36/220 (16%)
Query: 56 GNYVGLHIS-----RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF----VFG- 105
G Y+ I +A + T + +LG + ++ V G
Sbjct: 65 GWYLRGDIGMTNQRAKSIEATVAPGFTKTTEGLGFDSSPLFDLGVGYRFNNWFRADVIGQ 124
Query: 106 --INCHTTAAKD--------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
+ A + + K ++ + + + G + + + G GG+Y
Sbjct: 125 YRGKANLHGADNVIGPGFVGSDNYSGSKSEWVVMANAYVDLG-TWWCITPFIGAGVGGSY 183
Query: 156 VIDSSL----------EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
S S + GL Y VN ++ +Y Y
Sbjct: 184 NKISGFRDDGIAYLAALTPTPSASVAYFADSGKWNFAWAAHAGLAYKVNPGFTVELAYSY 243
Query: 206 IPHHIHS-----VNNSNAKSDVERVDRKGNAHIASLGINM 240
+ + + +++A ++ +H LG+
Sbjct: 244 MNLGDAAPGNFRLFDNSASGPTSIKLKELTSHDLKLGVRW 283
>gi|254672130|emb|CBA04884.1| Opacity protein and related surface antigens [Neisseria
meningitidis alpha275]
Length = 224
Score = 42.5 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 27/119 (22%), Gaps = 29/119 (24%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK----------------GRFDGHGSSV 183
D Y +V +K +
Sbjct: 119 FDKFKPYIGARVAYGHVKHQVHSVETKTTIVTSKPNGGPVPSSVTKPPYHQSHSISSLGL 178
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ G+ + + ++L YRY + + H SLG+ HF
Sbjct: 179 GVIAGVGFDITPKLTLDTGYRYHNWGRLK-------------NTRFKTHEVSLGMRYHF 224
>gi|54295459|ref|YP_127874.1| hypothetical protein lpl2545 [Legionella pneumophila str. Lens]
gi|53755291|emb|CAH16785.1| hypothetical protein lpl2545 [Legionella pneumophila str. Lens]
Length = 283
Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 64/249 (25%), Gaps = 45/249 (18%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFN------EADNNVEYQDDEYGIWSGNY 58
+ LF I+ + + + + A N V+ D GI
Sbjct: 2 KHMVLFLSALNMIISSSFAGTGGVASSSPTNQTGFFVGLGGAYNRVQINSDTSGI----- 56
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL--EDFVFGINCHTTAAKDD 116
L+ + L + N+ G+ D+++G+ ++
Sbjct: 57 --LNAISGFPPTGLFWGGTGEYSNTKQAFAPEARAGYFQPFKHSDWIWGLEFLYQYSRIK 114
Query: 117 STFYRLKEKYFIYGD------------------VVLK--------AGYSVDSLLIYGMGG 150
T Y Y + ++ G++ ++ IY G
Sbjct: 115 KTAYGGTMAPGTYINMINPNENVTNELSISAIQTRVRHELMLPVFIGHTFSNIFIYLGAG 174
Query: 151 FGGAYVIDSSLEKVES----DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ + + + G+ Y +N L +Y Y
Sbjct: 175 PSLFRTQHTMYSGSDGLSGYYIGEFTGLANTKWVWGGAVQTGIAYYLNSSWFLKFNYSYA 234
Query: 207 PHHIHSVNN 215
+ +NN
Sbjct: 235 RTGHYKINN 243
>gi|34540045|ref|NP_904524.1| hypothetical protein PG0189 [Porphyromonas gingivalis W83]
gi|34396356|gb|AAQ65423.1| hypothetical protein PG_0189 [Porphyromonas gingivalis W83]
Length = 235
Score = 42.5 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 21/182 (11%), Positives = 46/182 (25%), Gaps = 14/182 (7%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIE--LGHNIQLEDFVFGINCHTTAAKDDSTF 119
I + +G+G+E +N +F + +
Sbjct: 34 EIGGGFGAAQ---YFGDANRGLFGSSGVGLELVGRYNY---NFRWAFSTMLDWRTLRGDT 87
Query: 120 YRLKEKYFIYGDVVLKAGYSV------DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + + K G + + L Y G S +
Sbjct: 88 DKSGNVFPDFAQADFKVGLTQLHVRSEFNFLPYSDGYKYLGTARLSPYVAAGLSLGFASG 147
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ + G+G+ Y + I++ Y + +++ KS K N
Sbjct: 148 AKGSAFAPGITAGMGVKYKLKPRINVGIEYSFTGLLTDALDALTDKSVWLEDPYKINDSW 207
Query: 234 AS 235
Sbjct: 208 VK 209
>gi|240126749|ref|ZP_04739635.1| protein II [Neisseria gonorrhoeae SK-92-679]
gi|268685327|ref|ZP_06152189.1| opacity protein opA53 [Neisseria gonorrhoeae SK-92-679]
gi|268625611|gb|EEZ58011.1| opacity protein opA53 [Neisseria gonorrhoeae SK-92-679]
Length = 154
Score = 42.5 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 15/84 (17%)
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
S + + G V G+G+D + +++L A YRY
Sbjct: 86 SVPGAPTKKPAHHESRSISSLGFGAVAGVGID--ITPNLTLDAGYRYHNWGRLE------ 137
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 138 -------NTRFKTHEASLGVRYRF 154
>gi|148826224|ref|YP_001290977.1| outer membrane protein P5 [Haemophilus influenzae PittEE]
gi|148716384|gb|ABQ98594.1| Outer membrane protein P5 [Haemophilus influenzae PittEE]
Length = 238
Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 5/103 (4%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+D L +YG G E +++ ++N K +S + +G +Y V ++++
Sbjct: 2 LDGLDVYGKAGVALVRSDYKFYE--DANGTRNHKEGRHTARASGLFAVGAEYAVLPELAV 59
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+++ + ++ + GI+ F
Sbjct: 60 RLEYQWL---TRVGKYRPQDNPNTAINYNPWIGSINAGISYRF 99
>gi|37676363|ref|NP_936759.1| hypothetical protein VVA0703 [Vibrio vulnificus YJ016]
gi|37200905|dbj|BAC96729.1| hypothetical protein [Vibrio vulnificus YJ016]
Length = 195
Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 55/210 (26%), Gaps = 36/210 (17%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNI 97
A D E SG Y+G I T D + N + + G+
Sbjct: 16 SAFAQANTNDIEKKDVSGFYLGGGIG---TTTAFDDGVGTNDLNLKSSDSTYKLYGGY-- 70
Query: 98 QLEDFVFGINCHTTAAKD--DSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGA 154
Q V I T D ++ GY+ DS + G G
Sbjct: 71 QFNRIV-AIEAQYTRYGDIYSKDDADRHMVKPESIALMANLGYTFDSGWRPFATVGLGRT 129
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASYRYIPHHIHS 212
+ G +S G+G +Y +++ +Y + S
Sbjct: 130 ELD---------------FGPLSKTETSFRAGVGGEYSPKAIENLNFRVAY-----EVDS 169
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D D G++ F
Sbjct: 170 FMFDNGPRD----DVNIVLGSLYAGVSYKF 195
>gi|14578708|gb|AAK68961.1| major outer membrane protein [Brenneria quercina]
Length = 146
Score = 42.5 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 10/89 (11%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
Y + + G S + +GL+Y V + + Y+++ H
Sbjct: 3 VYTRLGGFFWRADSHDDVTGRGGNDTGISPMGAVGLEYAVTKNWATRLDYQWVKQHWCPG 62
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 63 TFGG----------RPDNGMLSVGVSYRF 81
>gi|148358182|ref|YP_001249389.1| hypothetical protein LPC_0043 [Legionella pneumophila str. Corby]
gi|296105539|ref|YP_003617239.1| hypothetical protein lpa_00057 [Legionella pneumophila 2300/99
Alcoy]
gi|148279955|gb|ABQ54043.1| hypothetical protein LPC_0043 [Legionella pneumophila str. Corby]
gi|295647440|gb|ADG23287.1| hypothetical protein lpa_00057 [Legionella pneumophila 2300/99
Alcoy]
Length = 233
Score = 42.5 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 71/208 (34%), Gaps = 24/208 (11%)
Query: 55 SGNYVGLHISRLYETH------PLADTI-NRKTYNSLLPNGLG-IELGHNIQLEDFV-FG 105
+G Y G+++ PL D + ++NS + G + G++ L +
Sbjct: 20 AGLYSGINLGINAVKINKDLVYPLEDPVPTTSSFNSAYTDFHGQLIAGYDFSLTSKISAA 79
Query: 106 INCHTTA--AKDDSTFYRLKEKYFIYGDVVLKAGYSV---------DSLLIYGMGGFGGA 154
+ + K +Y + LK GYS+ D + ++ G +
Sbjct: 80 VEANIDLFTGKARHRITEWYFDEDVYAEEQLKVGYSLFLLPTYHLNDMVQLFVGPGVSSS 139
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS-V 213
+ + ++ + + V + G + +I L +Y++ ++ + V
Sbjct: 140 RFNIAFSNTAGNVGVSDS---LNEWLTGVSIKAGSITKLTRNIDLLLTYQFTQYNSVTGV 196
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMH 241
D R K N + +G +H
Sbjct: 197 QMEPLSEDTLRGSYKPNVNTVLIGFKVH 224
>gi|154251432|ref|YP_001412256.1| OmpW family protein [Parvibaculum lavamentivorans DS-1]
gi|154155382|gb|ABS62599.1| OmpW family protein [Parvibaculum lavamentivorans DS-1]
Length = 210
Score = 42.5 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 26/102 (25%), Gaps = 9/102 (8%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y G + + + L +G DY +N + +
Sbjct: 118 ERFSPYVGAGL-----NYTIFYNEDVAAGSPVTSIDYDNAFGYALQVGADYALNDNWYAN 172
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + N A D + I +G+ F
Sbjct: 173 VDVKKLFLSTDVSMNGGAI----TADVDIDPWIVGVGVGYRF 210
>gi|152999140|ref|YP_001364821.1| OmpA domain-containing protein [Shewanella baltica OS185]
gi|160873745|ref|YP_001553061.1| OmpA domain-containing protein [Shewanella baltica OS195]
gi|307306587|ref|ZP_07586330.1| OmpA domain-containing protein [Shewanella baltica BA175]
gi|151363758|gb|ABS06758.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS185]
gi|160859267|gb|ABX47801.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS195]
gi|306910878|gb|EFN41306.1| OmpA domain-containing protein [Shewanella baltica BA175]
gi|315265973|gb|ADT92826.1| OmpA domain-containing protein [Shewanella baltica OS678]
Length = 190
Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 18/184 (9%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI--QLEDFVFGINCHT-TAAKDDSTF 119
S + L + + + G +G N D+ F + ++ D+
Sbjct: 21 ASYSDSSLELGVSAGQFNLKDSTGSYSGPSVGFNFIRNFNDW-FSFEGNYLSSFNMDNAN 79
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
Y ++ F V Y ++ IYG GG + S ++ F
Sbjct: 80 YDIQASTFSLAPV---FTYHINDTFSIYGKGGASSMRITSSERNGLD----------FSY 126
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ G GL+ +N I++ Y + + SLG
Sbjct: 127 NTIGWFYGFGLNTSINNRINVRLGYETVTGDTGIEILGVTADGFSIQSSHTKISVISLGA 186
Query: 239 NMHF 242
F
Sbjct: 187 TYRF 190
>gi|239999302|ref|ZP_04719226.1| outer membrane protein [Neisseria gonorrhoeae 35/02]
Length = 144
Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++N + + G+ + + +++L A YRY
Sbjct: 72 NGAVTTYNTDPKTQNDYQSNSIRRVGLGVIAGIGFDITPNLTLDAGYRYHNWGRLE---- 127
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 128 ---------NTRFKTHEASLGVRYRF 144
>gi|76594253|gb|ABA54403.1| Opa22 [Mesorhizobium sp. 7653R]
Length = 257
Score = 42.5 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 62/233 (26%), Gaps = 27/233 (11%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKT---YNSLLPNGL 89
D + + SG Y+ +S L + + D P
Sbjct: 24 AADYDPPIYTDQAPDYVPVEVGSGWYLRGDVSYLVQKNFKNDEFAFTPASFDEKEDPIFA 83
Query: 90 GIELGH---NIQLEDFVFG-INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL- 144
I G+ + +D G + + D + LK Y+ +L
Sbjct: 84 SIGFGYHFNDYLRDDLNLGYLPGNKIGVGYDDPLSVVPPATSTVASANLK-NYAYSLMLN 142
Query: 145 ------------IYGMGGFGGAYVIDSSLEKVESDNSKNA-----KGRFDGHGSSVVLGI 187
Y GG G ++N + + L
Sbjct: 143 GYVDLGTYVGITPYVGGGVGIVQSTRQLSANYFTNNGDPTDDFVQTDDKTKYSLAYTLNA 202
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
GL Y V+ ++S+ Y+Y + A V + + H LG+
Sbjct: 203 GLAYQVSKNVSVDLGYQYFSAPDAEY-VTAASLTSFPVHKGISNHQIKLGLRY 254
>gi|160871749|ref|ZP_02061881.1| hypothetical protein RICGR_0764 [Rickettsiella grylli]
gi|159120548|gb|EDP45886.1| hypothetical protein RICGR_0764 [Rickettsiella grylli]
Length = 206
Score = 42.5 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 62/199 (31%), Gaps = 32/199 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YV + LA T +R N+L + LG + Q F + +
Sbjct: 27 GVYVTGQVGYANNNMHLA-TEDRIDNNNLSESSLGGRVAIGYQFNQN-FALETGYFHSMK 84
Query: 116 DSTFYRLKEKYFIYGD-----------VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK 163
K+K +V K+ + V++ L +YG G
Sbjct: 85 KHVTLVGKDKAETLISDNLGLRQHAIDLVAKSIFPVNTNLNLYGKLGVAYLTTDFDKDTF 144
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
H + IG+ Y + ++S+ +S+ +I
Sbjct: 145 NGR----PISNMIAKHKLAPEAAIGVSYDITPNVSIDSSWTHIQP--------------I 186
Query: 224 RVDRKGNAHIASLGINMHF 242
+R GN +LG+ +F
Sbjct: 187 GKNRPGNIDFVALGLGYNF 205
>gi|149911086|ref|ZP_01899713.1| outer membrane protein OmpW, putative [Moritella sp. PE36]
gi|149805836|gb|EDM65825.1| outer membrane protein OmpW, putative [Moritella sp. PE36]
Length = 274
Score = 42.5 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 2/102 (1%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + L Y G D+ E+ + + +G+DYM+N
Sbjct: 172 FGNADSKLRPYVGAGINFTIFYDTKF--NETGTGAGLSNLDMSNSVGLAAQLGIDYMIND 229
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
++AS Y + A S + D ++ S+G
Sbjct: 230 KWLVNASVMYADISTDVTFDVGADSYKIKTDIDPLVYMVSIG 271
>gi|188581805|ref|YP_001925250.1| hypothetical protein Mpop_2558 [Methylobacterium populi BJ001]
gi|179345303|gb|ACB80715.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 283
Score = 42.5 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 6/105 (5%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF-DGHGSSVVLGIGLDYMVNYDIS 198
L + G G + + + A + + L G+ Y V+ +
Sbjct: 159 WYGLTPFLGAGVGAVRITLDNFKDTNVVTQGLAYAKAGSKTNLAWALHAGVGYEVSPSFT 218
Query: 199 LSASYRYIPHHI----HSVNNSNAKSDVERVDRK-GNAHIASLGI 238
+ +YRY+ N + E + K ++H LG+
Sbjct: 219 VELAYRYLNLGDGKTGTVYNYAGQCGSCEALTFKNVDSHDVKLGL 263
>gi|89076791|ref|ZP_01163052.1| outer membrane protein A [Photobacterium sp. SKA34]
gi|89047566|gb|EAR53184.1| outer membrane protein A [Photobacterium sp. SKA34]
Length = 190
Score = 42.5 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 37/150 (24%), Gaps = 20/150 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y GL + + + + + G +G+ Q + +
Sbjct: 33 WYAGLDLGKGSYKNAGDEHALSVEQDH---WAFGTHVGY--QFNRY-LSTEVAYQYFDEG 86
Query: 117 STFYRLKEKYFIYG--DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
Y L + V G ++ + G
Sbjct: 87 QASYPLGNIKGNFQQLAVKGIIGTYLNDFYPFLNAGVAAWSGK------------SRGLR 134
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+ G S V G G+ Y +N S Y+
Sbjct: 135 EGNATGFSPVYGAGIRYYINSRFSTKLEYQ 164
>gi|194337226|ref|YP_002019020.1| porin, opacity type [Pelodictyon phaeoclathratiforme BU-1]
gi|194309703|gb|ACF44403.1| porin, opacity type [Pelodictyon phaeoclathratiforme BU-1]
Length = 212
Score = 42.5 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 56/189 (29%), Gaps = 12/189 (6%)
Query: 58 YVGLHISRLYETHPL--ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
YV +I + + N +G+ + + ED+
Sbjct: 28 YVSGNIGVSSFNDTAFKSPSTNATLAEMTFKSGIDLRCAAGLDFEDYRIEAELSYQKGDV 87
Query: 116 D-STFYRLKEKYFIYGDVV---LKAGYSVDS--LLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ T + + V Y + + Y GG G + V + V+ +
Sbjct: 88 NRGTEHGGTADMQGFKSVTSLMANGYYDFNPEGINPYLTGGLGCSRVN---FDNVKVKGA 144
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
LG G+ + ++++ A YRY H S+ N + D +
Sbjct: 145 PYPGLTEHHTVLGYQLGAGIGIPITREVTVDAQYRYSGHSRISMENPDFHYDFKSSGSSF 204
Query: 230 NAHIASLGI 238
+G+
Sbjct: 205 LLG-LRVGL 212
>gi|104779838|ref|YP_606336.1| outer membrane protein OprG [Pseudomonas entomophila L48]
gi|95108825|emb|CAK13521.1| outer membrane protein OprG [Pseudomonas entomophila L48]
Length = 227
Score = 42.1 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 4/103 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D L + D + +G+DYM+ ++ +A
Sbjct: 127 KFQPYAGVGINYTLFFDEDLSSNRKAQGFSNMKLQDS--IGIAGQLGMDYMITDNLLFNA 184
Query: 202 SYRYIPHHIHSVNNSNAKSDV--ERVDRKGNAHIASLGINMHF 242
+ Y+ + + + V +VD + + +GI F
Sbjct: 185 AVWYVDIDTKATIDGPSALGVGKTKVDVDVDPWVYMVGIGYKF 227
>gi|313204239|ref|YP_004042896.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312443555|gb|ADQ79911.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 410
Score = 42.1 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 25/186 (13%), Positives = 53/186 (28%), Gaps = 23/186 (12%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAKDDSTFYRLKEK 125
Y P + +Y + + + FG +
Sbjct: 39 YRVSPTSTKGGVNSYIDDMGWTFPGVA-VEYTINPLIGFGGGVDYLTYNRNVAKGN-TLD 96
Query: 126 YFIYGDVVL-------KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+ ++G V L + G+ +YG G G + + L E +
Sbjct: 97 FSVFGSVNLTNLLVPKRTGF-WSRANVYGTWGAGLGFFSNEFLATGEKHKLMSPL----- 150
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYR---YIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ +Y ++ +L A + Y + V++S S + +A +
Sbjct: 151 ----FTSALSFEYKLSKAWALQAEIQRRYYTREDLGGVSSSKNLSGGSDMVYGNDAAALT 206
Query: 236 LGINMH 241
LG+
Sbjct: 207 LGLRYK 212
>gi|194097687|ref|YP_002000727.1| P28_NEIGO Opacity protein V28 precursor [Neisseria gonorrhoeae
NCCP11945]
gi|193932977|gb|ACF28801.1| P28_NEIGO Opacity protein V28 precursor [Neisseria gonorrhoeae
NCCP11945]
Length = 222
Score = 42.1 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 31/121 (25%), Gaps = 32/121 (26%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVE-------------------SDNSKNAKGRFDGHGS 181
D Y +V S K S +
Sbjct: 115 DKFKPYIGARVAYGHVRHSISTKKTTEFLTVARNRVTVPGTYKVSTTPGAHQESNSIRRV 174
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + G+ + + +++L A YRY + + H ASLG+
Sbjct: 175 GLGVIAGVGFDITPNLTLDAGYRYHNWGRLE-------------NTRFKTHEASLGVRYR 221
Query: 242 F 242
F
Sbjct: 222 F 222
>gi|254496794|ref|ZP_05109647.1| hypothetical protein LDG_1232 [Legionella drancourtii LLAP12]
gi|254353979|gb|EET12661.1| hypothetical protein LDG_1232 [Legionella drancourtii LLAP12]
Length = 249
Score = 42.1 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 79/237 (33%), Gaps = 21/237 (8%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS--R 65
AL + F ++P+ A ++ L N +N + + + Y H +
Sbjct: 4 ALKLLFFCFSLIPSTLCANNITLFVTGGPNNARLSNKPLVEINDFV-TNGYQSAHKNHWG 62
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD-DSTFYRLKE 124
+ +A + ++ + GL G++ QL V G D+ Y +
Sbjct: 63 GFWGAGIAHSFAEIVPSTNISLGL---AGYSTQLGS-VRGKEYPFINDGIYDALDYSFRV 118
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN------AKGRFDG 178
K + + Y + + + G G A+ + +V +D S +
Sbjct: 119 KSSQLM-LESRLSYVFYNWQPFVLVGIGKAWNRLKNYNEVTADPSSSATALNPGFSSNTH 177
Query: 179 HGSSVVLGIGLDYMV------NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ LG+G+ + + N S YRY + ++ +R+ K
Sbjct: 178 RNFAYELGVGVQHSLFEDKKHNIHYRASVGYRYFHLGKGKLGALPEQTSTDRLQIKN 234
>gi|296533036|ref|ZP_06895682.1| OmpA/MotB domain protein [Roseomonas cervicalis ATCC 49957]
gi|296266622|gb|EFH12601.1| OmpA/MotB domain protein [Roseomonas cervicalis ATCC 49957]
Length = 274
Score = 42.1 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 27/276 (9%), Positives = 61/276 (22%), Gaps = 53/276 (19%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+ + P ++A + P +G Y+G +
Sbjct: 6 LLLAATILATPAVAMAQEASSPWYSGFMPNPAAQPV---------TGVYIGAGAGWNHSD 56
Query: 70 HPLADTINRKTY-------------NSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
+ + + +G+ F I + D
Sbjct: 57 ARGLNALGGNGSYFANNNRNRQGNLGFEEGFVGALSIGYGFGNG-FRTEIEGNYRYNSVD 115
Query: 117 STFYRLKEKYFIYGDVVLKAG--------------YSVDSLLI--------YGMGGFGGA 154
+ G + + Y GG G
Sbjct: 116 RLGGFQGRAGGPGVGMRGIDGEQQQYGVMVNAFYDFQLPRWFPNMPVAMVPYIGGGVGWI 175
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV--NYDISLSASYRYI-----P 207
+ + + + + G+ + + +SL+ YRY
Sbjct: 176 WTDLDARGTQINAPGNTVRIDDTVGQFAYQGIAGVAFPIESAPGLSLTLEYRYTGALQGH 235
Query: 208 HHIHSVNNSNAKSDVERVDRKG-NAHIASLGINMHF 242
+ +V + A R + + H +G+ F
Sbjct: 236 YKGRTVAANGATVGNGRFEADQLHNHSVMVGLRYAF 271
>gi|254491016|ref|ZP_05104197.1| OmpW family [Methylophaga thiooxidans DMS010]
gi|224463529|gb|EEF79797.1| OmpW family [Methylophaga thiooxydans DMS010]
Length = 239
Score = 42.1 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 69/241 (28%), Gaps = 16/241 (6%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKID-LFNEADNNVEYQDDEYGIWS-----GNYVGLHIS 64
L + ++ ++ D L V DD +++ G Y I
Sbjct: 6 LATILLAAIGLSAVTAPVFAYEAGDWLVRGRVITVAPNDDSGRLYTDALSPGAYT--SIG 63
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
+ TY G+ + LG + G + + ++
Sbjct: 64 EGVKVDNDTVPELDITYMITRNWGVELILGFSEHNVAVHKGAEITARGLGMNGSSQVIES 123
Query: 125 KYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
K L Y + Y G Y D + ++ + D
Sbjct: 124 KVLPP---TLLLQYHFRPDGDVRPYLGAGINYTYFFDEKVPSSSLVAAQGDDIKLDSS-W 179
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + G+D +N D ++ +YI + + + +++ + + +GI
Sbjct: 180 GLAVQAGVDVALNQDWFVNFDVKYIDIDTEA-HFDGTAAARLKINTDIDPFVWGVGIGRR 238
Query: 242 F 242
F
Sbjct: 239 F 239
>gi|417403|sp|Q05033|OPA66_NEIGO RecName: Full=Opacity protein opA66; Flags: Precursor
gi|940803|emb|CAA79374.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 238
Score = 42.1 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 30/91 (32%), Gaps = 13/91 (14%)
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
GA D ++ + + + + G+ + + +++L A YRY
Sbjct: 161 AGARGTDPTVSSPYKNTQDAHQESNSIRRVGLGVIAGVGFDITPNLTLDAGYRYHNWGRL 220
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 221 E-------------NTRFKTHEASLGVRYRF 238
>gi|154707620|ref|YP_001423811.1| heat resistant agglutinin [Coxiella burnetii Dugway 5J108-111]
gi|154356906|gb|ABS78368.1| heat resistant agglutinin [Coxiella burnetii Dugway 5J108-111]
Length = 181
Score = 42.1 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 52/161 (32%), Gaps = 26/161 (16%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC 108
D + SG YVGLH + +G ++G+ + + I
Sbjct: 24 DTPFLNSGPYVGLHGGVA----------LPSESDLNAGPVVGAQVGYR--MGNVR--IEG 69
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVE 165
+ +S K ++ Y + L+ + G G + ++ +
Sbjct: 70 ALSYY-SNSLEANSDAKLR-MTTLMANGYYDFNFNAPLVPFVGVGVGWVHAWRTNNGVLL 127
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ D + + G+ + V+ ++L YRY+
Sbjct: 128 NR-------GTDNNEFAYQGIAGVSFRVSPRVTLGVDYRYL 161
>gi|120613199|ref|YP_972877.1| OmpW family protein [Acidovorax citrulli AAC00-1]
gi|120591663|gb|ABM35103.1| OmpW family protein [Acidovorax citrulli AAC00-1]
Length = 230
Score = 42.1 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 9/112 (8%)
Query: 135 KAGYSVDSLLIYGMGGFGGAYV----IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ G + + Y G A ++L + N + IG
Sbjct: 124 RFGEAKSAFRPYVGLGVTYAKFFKERTTATLNGLTGGTPANPTTASIDDKWGITPQIGFV 183
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +N + A+Y Y + S+ + +D + N ++ ++GI F
Sbjct: 184 WNINDKWFVDAAY-YKSFLKTRTHLSSG----QTIDIRLNPNVFAVGIGYRF 230
>gi|86145036|ref|ZP_01063368.1| outer membrane protein OmpW [Vibrio sp. MED222]
gi|85837935|gb|EAQ56047.1| outer membrane protein OmpW [Vibrio sp. MED222]
Length = 215
Score = 42.1 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D L D + D + +G+DYM+N
Sbjct: 113 FGEANSKFRPYVGAGINYTVFFDEELNGAAKDAGLSDLSLDDSW--GLAANVGMDYMIND 170
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D L+AS Y + + K D + + +G +F
Sbjct: 171 DWFLNASVWYADIDTTAKYKAGGKQ--YSTDVDIDPWVFMIGGGYNF 215
>gi|29654891|ref|NP_820583.1| opacity family porin protein [Coxiella burnetii RSA 493]
gi|161830942|ref|YP_001597432.1| opacity family porin protein [Coxiella burnetii RSA 331]
gi|165924228|ref|ZP_02220060.1| opacity family porin protein [Coxiella burnetii RSA 334]
gi|212212051|ref|YP_002302987.1| heat resistant agglutinin [Coxiella burnetii CbuG_Q212]
gi|81628627|sp|Q83BB2|Y1600_COXBU RecName: Full=Uncharacterized protein CBU_1600; Flags: Precursor
gi|29542160|gb|AAO91097.1| heat resistant agglutinin [Coxiella burnetii RSA 493]
gi|161762809|gb|ABX78451.1| opacity family porin protein [Coxiella burnetii RSA 331]
gi|165916327|gb|EDR34931.1| opacity family porin protein [Coxiella burnetii RSA 334]
gi|212010461|gb|ACJ17842.1| heat resistant agglutinin [Coxiella burnetii CbuG_Q212]
Length = 181
Score = 42.1 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 52/161 (32%), Gaps = 26/161 (16%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC 108
D + SG YVGLH + +G ++G+ + + I
Sbjct: 24 DTPFLNSGPYVGLHGGVA----------LPSGSDLNAGPVVGAQVGYR--MGNVR--IEG 69
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVE 165
+ +S K ++ Y + L+ + G G + ++ +
Sbjct: 70 ALSYY-SNSLEANSDAKLR-MTTLMANGYYDFNFNAPLVPFVGVGVGWVHAWRTNNGVLL 127
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ D + + G+ + V+ ++L YRY+
Sbjct: 128 NRGP-------DNNEFAYQGIAGVSFRVSPRVTLGVDYRYL 161
>gi|329910087|ref|ZP_08275230.1| Outer membrane protein W precursor [Oxalobacteraceae bacterium
IMCC9480]
gi|327546277|gb|EGF31307.1| Outer membrane protein W precursor [Oxalobacteraceae bacterium
IMCC9480]
Length = 205
Score = 42.1 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 13/98 (13%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G + + + G + L G+DY ++ + SL+
Sbjct: 121 PYVGAGVNYTRISNVN--------LLGGAGSLESSSVGFALQAGVDYKLDKNWSLNL--- 169
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + S V+ + + + +G+ F
Sbjct: 170 --DIKKVQIRSDLMISGVKASALQVDPLMVGVGLGYRF 205
>gi|148265071|ref|YP_001231777.1| hypothetical protein Gura_3032 [Geobacter uraniireducens Rf4]
gi|146398571|gb|ABQ27204.1| hypothetical protein Gura_3032 [Geobacter uraniireducens Rf4]
Length = 224
Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 14/167 (8%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G+ G+ + + G+ ++ R + V+ + D + G
Sbjct: 60 TYGVRGGYWFTKQRW-LGVGGDFSSMHAKGATARFDL-APLTPMVMFRLPLLSDENIPQG 117
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG--SSVVLGIGLDYMVNYDISLSASYRY 205
M SL S ++ + + G + + G+ ++ I+L + YRY
Sbjct: 118 MLQPYIGIGPSISLYTYASADNGPPTDKINSWGINAGFQVPAGIALQLSKHIALFSEYRY 177
Query: 206 I--------PHHIHSVNNSNAKSD--VERVDRKGNAHIASLGINMHF 242
+ N + SD ++V + H G++ F
Sbjct: 178 AYYRVNVLQDTTTYLFNAAIGNSDNIAKKVTASLSMHNVLFGVSFRF 224
>gi|261821570|ref|YP_003259676.1| outer membrane protein W [Pectobacterium wasabiae WPP163]
gi|261605583|gb|ACX88069.1| OmpW family protein [Pectobacterium wasabiae WPP163]
Length = 210
Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + D L Y G D + + V GLDY +N
Sbjct: 108 FGDAQDKLRPYLGVGLNYTMFFDEKFNDTGKGAGLSDLSLKNSW--GVAAQAGLDYNLNK 165
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+ S ++ + +D + + K + G+ F
Sbjct: 166 NWLLNMSVWWMDIDTDVKFKAG--NDQQSIHTKLDPWAFMFGVGYRF 210
>gi|224823922|ref|ZP_03697031.1| OmpA domain protein transmembrane region-containing protein
[Lutiella nitroferrum 2002]
gi|224604377|gb|EEG10551.1| OmpA domain protein transmembrane region-containing protein
[Lutiella nitroferrum 2002]
Length = 224
Score = 42.1 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 65/216 (30%), Gaps = 27/216 (12%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRL----------YETHPLADTINRKTYNSLLPNGLGIE 92
+V +G Y G+ + + T T G +
Sbjct: 19 SVPAAHAADAAATGWYGGISVGQSKAQDFSASDFDSTLAQGGLTASGTSVDDTDTGWKLF 78
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK----YFIYGDVVLKAGYSVDSL--LIY 146
G+ V G +T + + V +K G +D++ L
Sbjct: 79 AGYQFNRYFAVEGGYLDLGRFDAHTTVTAVDGSPITPTSVDASVKVKDGLFIDAVGILPI 138
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ SL+ S ++ S + G+G++Y +++L A +
Sbjct: 139 TEQFSAFGKLGVYSLKTEISASAGGRSASDSARNSDLTYGLGVNYAFTKELALRAEWE-- 196
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
H ++ +SDV+ + SLG+ F
Sbjct: 197 RFHKVGDSDKTGQSDVD---------LLSLGLTYRF 223
>gi|254788451|ref|YP_003075880.1| OmpA domain-containing protein [Teredinibacter turnerae T7901]
gi|237685592|gb|ACR12856.1| OmpA domain protein [Teredinibacter turnerae T7901]
Length = 178
Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 48/189 (25%), Gaps = 37/189 (19%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAA 113
SG Y+G I R D S + + +G+N L F+ +
Sbjct: 26 SGIYIGGSIGRASLDTKDTDY-----DLSEEASSYKVLVGYNFGLLPFLDLAVEADYR-- 78
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + D G + ++ G+ +S
Sbjct: 79 SYGEFENNVAKSELTSIDAYGLVGMNFGLAGVFVKYGYA-----------NTDVDSVIGD 127
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
++ +S GIG + + Y Y + +
Sbjct: 128 QDYNESDTSPSYGIGAKASLLD-FTFRGEYEYFDLQDTD-----------------DLSM 169
Query: 234 ASLGINMHF 242
S+G+ F
Sbjct: 170 VSVGVTYTF 178
>gi|218677020|ref|YP_002395839.1| outer membrane protein W [Vibrio splendidus LGP32]
gi|218325288|emb|CAV27291.1| Outer membrane protein OmpW [Vibrio splendidus LGP32]
Length = 215
Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D L D + D + +G+DYM+N
Sbjct: 113 FGEANSKFRPYVGAGINYTVFFDEELNGAAKDAGLSDLSLDDSW--GLAANVGMDYMIND 170
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D L+AS Y + + K D + + +G +F
Sbjct: 171 DWFLNASVWYADIDTTAKYKAGGKQ--YSTDVDIDPWVFMIGGGYNF 215
>gi|319787228|ref|YP_004146703.1| hypothetical protein Psesu_1630 [Pseudoxanthomonas suwonensis 11-1]
gi|317465740|gb|ADV27472.1| hypothetical protein Psesu_1630 [Pseudoxanthomonas suwonensis 11-1]
Length = 227
Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 60/217 (27%), Gaps = 37/217 (17%)
Query: 30 LPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL 89
EY+ G ++G + + Y L N L
Sbjct: 44 TQEPALPAAMEYRRAEYERHGQRDRGGFFIGAQAGKGW------------VYEDLDQNAL 91
Query: 90 GIELGHNIQLEDF-VFGINCHTT--AAKDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLI 145
G+ G+ Q + GI A D +Y + K+ G + + + +
Sbjct: 92 GVNAGYRWQAGPIALLGIEVAAGRLADTSDDGWYAEEVKFRSIG-FNGRFNFGARNPWYA 150
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
G+ A + + G G+ +N +++L+ Y
Sbjct: 151 VVRAGYFDADMRGDGW---------------SDNMDGGYAGFGIGVDLNRNVNLNLVY-- 193
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ D + ++ A + GI F
Sbjct: 194 --TAYVYADSYYYDYDWDYIEF-NRADTVTFGIEARF 227
>gi|240124607|ref|ZP_04737493.1| P28_NEIGO Opacity protein V28 precursor [Neisseria gonorrhoeae
SK-92-679]
gi|268683173|ref|ZP_06150035.1| outer membrane protein [Neisseria gonorrhoeae SK-92-679]
gi|268623457|gb|EEZ55857.1| outer membrane protein [Neisseria gonorrhoeae SK-92-679]
Length = 186
Score = 42.1 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 32/121 (26%), Gaps = 32/121 (26%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG-------------------RFDGHGS 181
D Y +V S K ++ A
Sbjct: 79 DKFKPYIGARVAYGHVRHSISTKKTTEFLTTASTPDAVSGAYKVSRTPGAHQESNSIRRV 138
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + G+ + + +++L A YRY + + H ASLG+
Sbjct: 139 GLGVIAGVGFDITPNLTLDAGYRYHNWGRLE-------------NTRFKTHEASLGVRYR 185
Query: 242 F 242
F
Sbjct: 186 F 186
>gi|196018893|ref|XP_002118883.1| predicted protein [Trichoplax adhaerens]
gi|190577855|gb|EDV18630.1| predicted protein [Trichoplax adhaerens]
Length = 417
Score = 42.1 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
LI G G + + ++ + + + +G+G+ + ++ + +L
Sbjct: 323 FVPFLILGAGASKMKIAGINEIYNNITNKMEQKPSLLNKTSFAYRVGVGMKFKMSGNSAL 382
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
S RY + + ++N + K K H S GI
Sbjct: 383 EVSARYFDYGKYKLSNGDQK--------KIKGHDFSAGI 413
>gi|270159919|ref|ZP_06188575.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|269988258|gb|EEZ94513.1| conserved hypothetical protein [Legionella longbeachae D-4968]
Length = 259
Score = 42.1 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 4/100 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF---DGHGSSVVLGIGLDYMVNYDISLSA 201
Y G G + + +++ + F S G+GLD V + + A
Sbjct: 158 PYISAGIGASRNRGYNYQEIPVEPYAVPDPSFANRTQTNFSYSAGVGLDIEVTKNWRIGA 217
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKG-NAHIASLGINM 240
Y Y + S + ++V N + ++
Sbjct: 218 GYEYSNLGPTKLGRSPVQMTSQQVSSGTINTNQVLAQVSY 257
>gi|326424195|ref|NP_762179.2| membrane protein [Vibrio vulnificus CMCP6]
gi|319999579|gb|AAO07169.2| membrane protein [Vibrio vulnificus CMCP6]
Length = 195
Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 55/210 (26%), Gaps = 36/210 (17%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNI 97
A D E SG Y+G I T D + N + + G+
Sbjct: 16 SAFAQANTNDIEKKDVSGFYLGGGIG---TTTAFDDGVGTNDLNLKSNDSTYKLYGGY-- 70
Query: 98 QLEDFVFGINCHTTAAKD--DSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGA 154
Q V I T D ++ GY+ DS + G G
Sbjct: 71 QFNRIV-AIEAQYTRYGDIYSKDDADRHMVKPESIALMANLGYTFDSGWRPFATVGLGRT 129
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASYRYIPHHIHS 212
+ G +S G+G +Y +++ +Y + S
Sbjct: 130 ELD---------------FGPLSKTETSFRAGVGGEYSPKAIENLNFRVAY-----EVDS 169
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D D G++ F
Sbjct: 170 FMFDNGPRD----DINIVLGSLYAGVSYKF 195
>gi|118594668|ref|ZP_01552015.1| possible outer membrane adhesin [Methylophilales bacterium
HTCC2181]
gi|118440446|gb|EAV47073.1| possible outer membrane adhesin [Methylophilales bacterium
HTCC2181]
Length = 237
Score = 42.1 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 51/199 (25%), Gaps = 21/199 (10%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC----HTTAAKDDSTF 119
T+ + T + G+ G ++F + +
Sbjct: 39 GVTSFTNHVPVTQLLSDEDLGTGTAFGLSAG-KYLTDNFRLELEVIKRDNYEYEAQWLVL 97
Query: 120 YRLKEKYFIYGDVVLKAG-YSVDSL-------LIYGMGGFGGAYVI-DSSLEKVESDNSK 170
L EK I + G Y Y GG G + +++
Sbjct: 98 RTLSEKADIESTSLFINGFYDFQPFSIGNTSITPYLGGGIGISRNKMGTTIGLNNGVPDI 157
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR--- 227
+ K + L G + + +ISL +Y+Y+ + V +
Sbjct: 158 DTKEGNTISEFAYKLSAGTLFSLTENISLDVNYQYVNLGEFESGTALYNDGVFIANFQRP 217
Query: 228 ----KGNAHIASLGINMHF 242
+G+ F
Sbjct: 218 FNGGDIKTQEIMVGLQYTF 236
>gi|311696495|gb|ADP99368.1| outer membrane protein OmpW [marine bacterium HP15]
Length = 242
Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 41/112 (36%), Gaps = 11/112 (9%)
Query: 142 SLLIYGMGGFGGA--------YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
Y G + ++ + V + + + IGLDYM+
Sbjct: 131 KFQPYVGAGVNYTNFFEEKTTQTLTNTYDAVAGNPGIDGTDIKLDDSFGLAAEIGLDYMI 190
Query: 194 NYDISLSASYRYIPHHIHSVNNS---NAKSDVERVDRKGNAHIASLGINMHF 242
++ ++A+ +I + N+ NA +D +D + + +G++ F
Sbjct: 191 TENVGINAAVWWIDIDTEATINAYAGNAVADTSTIDVDIDPWVYMVGVSYKF 242
>gi|197103803|ref|YP_002129180.1| OmpA family protein [Phenylobacterium zucineum HLK1]
gi|196477223|gb|ACG76751.1| OmpA family protein [Phenylobacterium zucineum HLK1]
Length = 410
Score = 42.1 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 30/238 (12%), Positives = 67/238 (28%), Gaps = 31/238 (13%)
Query: 25 AVDLYLPRKIDLFNEADNNVE------YQDDEYGIWSGNYVGLHISRLYETHPLADTINR 78
AVDL ++ NN + ++ W+G + +
Sbjct: 42 AVDLGYHWPEQFEMDSSNNAPNGNPYVWDFNQEEDWAGF---ARLGY----QVTDNWRVE 94
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY 138
+ + G N V G+ + + V+ Y
Sbjct: 95 LELGYRGGDLESVRGGSN----QAVLGLCTPGVVRTAAAPTCGSPDGDVTSWTVMGNVIY 150
Query: 139 SV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA--------KGRFDGHGSSVVLGI 187
+ S+ + GG G +V +L + + A D + L
Sbjct: 151 DIMPGSSINPFIGGGIGINHVSMETLGQFSNVPGITAANPAIQNLTIDDDDTAFAWQLLA 210
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV---ERVDRKGNAHIASLGINMHF 242
G+ + +++ +YRY+ +++ + + + +LG+ F
Sbjct: 211 GVAWRATDRLNVDLTYRYLGGSDLDFDSTGSNAGGLQPGVFSGEYRDSSVTLGLRYSF 268
>gi|294146494|ref|YP_003559160.1| outer membrane protein W [Sphingobium japonicum UT26S]
gi|292676911|dbj|BAI98428.1| outer membrane protein W [Sphingobium japonicum UT26S]
Length = 220
Score = 41.7 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 2/102 (1%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y G K +G+D +N + L+
Sbjct: 121 GKIRPYVGAGVNYTLFYSEKASGALEGAVGATKVHMSDS-FGWAGQVGVDIDLNERMFLN 179
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+YI + S A + V+RV + + + +G+ M F
Sbjct: 180 FDVKYIDIDTTA-RLSTAGAGVQRVKLELDPFVFGVGVGMKF 220
>gi|326319264|ref|YP_004236936.1| OmpW family protein [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323376100|gb|ADX48369.1| OmpW family protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 230
Score = 41.7 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 9/112 (8%)
Query: 135 KAGYSVDSLLIYGMGGFGGAYV----IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ G + + Y G A ++L + N + IG
Sbjct: 124 RFGEAKSAFRPYVGLGVTYAKFFKERTTATLNGLTGGTPANPTTASIDDKWGITPQIGFV 183
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +N + A+Y Y + S+ + +D + N ++ ++GI F
Sbjct: 184 WNINDKWFVDAAY-YKSFLKTKTHLSSG----QTIDIRLNPNVFAVGIGYRF 230
>gi|260771361|ref|ZP_05880287.1| CymA protein precursor [Vibrio furnissii CIP 102972]
gi|260613677|gb|EEX38870.1| CymA protein precursor [Vibrio furnissii CIP 102972]
Length = 344
Score = 41.7 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 34/147 (23%), Gaps = 12/147 (8%)
Query: 99 LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD---VVLKAGYSVDSLLIYGMGGFGGAY 155
++ G+ + + + YS D G A
Sbjct: 207 FGNWELGVELYYQIKDNKDHQANGAINEISDFTEKYIEPIVQYSFDD------AGVLYAR 260
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
E S +S D +G + V + L Y Y
Sbjct: 261 FRLGENETKNSASSGGGNANVDYFKDIRKATLGYEQAVGDNWLLKGEYEYANEVEEKSQL 320
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ E + + H L F
Sbjct: 321 AGWEAKNES---ELSQHTVYLQALYRF 344
>gi|146305475|ref|YP_001185940.1| OmpW family protein [Pseudomonas mendocina ymp]
gi|145573676|gb|ABP83208.1| OmpW family protein [Pseudomonas mendocina ymp]
Length = 230
Score = 41.7 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 44/246 (17%), Positives = 80/246 (32%), Gaps = 20/246 (8%)
Query: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
M+F+ Y + V ++ V + A + + N ++ +S YVG
Sbjct: 1 MSFSNYKVIAMPVLVANFVLGAATA---WANENYPAKSAGYNQGDWV--ASFNFSKVYVG 55
Query: 61 LHISRLY-ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
+ L L + ++ L + + NI ++ FV G+ + S
Sbjct: 56 EELGDLNVGGGALPNADVSIGNDTTLTFDIAFFVSSNIAVDFFV-GVPARAKFQGEKSIS 114
Query: 120 YRLKEKYFIYGDVVLKAGY---SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ YG +L Y S + L Y G G D + + S +
Sbjct: 115 SLGRVSEVDYGPAILSLQYHYDSFERLYPYVGVGVGRVLFFDKTDGALSSFDI------- 167
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ +GL Y + L++ RYIP +++ I SL
Sbjct: 168 -KDKWAPAFQVGLRYDLGNSWMLNSDVRYIPFKTDVTGTLGPVPVSTKIEVDP--FILSL 224
Query: 237 GINMHF 242
G + F
Sbjct: 225 GASYVF 230
>gi|37526370|ref|NP_929714.1| outer membrane protein W [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36785801|emb|CAE14852.1| Outer membrane protein W precursor [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 213
Score = 41.7 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 2/98 (2%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G + + N V +GLDY ++ + L+AS
Sbjct: 118 PYVGVGLNYTTFFNEKFNGNSAVKDNNLHSLDLKDSWGVAGQVGLDYELDQNWMLNASVW 177
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + + ++D + + + G+ HF
Sbjct: 178 WVNIETDVKFKAGDQQ--YKIDTRLDPWVFMFGVGYHF 213
>gi|37624564|gb|AAQ96078.1| outer membrane protein II [Hafnia alvei]
Length = 162
Score = 41.7 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + +K + G S + IG++Y +N D + Y+++ + D
Sbjct: 17 DGSANSATKGRYIDSNDTGVSPLAAIGVEYALNKDWATRLDYQFV----------SNIGD 66
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + S+G+ F
Sbjct: 67 ANETAARPDNTLLSVGVTYRF 87
>gi|299065468|emb|CBJ36637.1| putative outer membrane protein W precursor (ompW) [Ralstonia
solanacearum CMR15]
Length = 224
Score = 41.7 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 24/101 (23%), Gaps = 10/101 (9%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G + + V+ + L G DY + I
Sbjct: 134 RFKPYLGAGLNYTRISN-----VDLQVPGVGSLDLSRNSFGPALQAGFDYRLTDRI---- 184
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + ++ + + + +G+ F
Sbjct: 185 -YLNVDIKKTWISADVKLGGQTVSKVRIDPWLVGMGLGYRF 224
>gi|197120984|ref|YP_002132935.1| OmpW family protein [Anaeromyxobacter sp. K]
gi|196170833|gb|ACG71806.1| OmpW family protein [Anaeromyxobacter sp. K]
Length = 208
Score = 41.7 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 11/129 (8%), Positives = 38/129 (29%), Gaps = 10/129 (7%)
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ ++ + + ++ + + Y G + + + K
Sbjct: 90 DVKLSGTKIGTFSHLPPTLTVQGHLPLGRVKPYLGAGV-----NLTLVTDTSLNVPGVGK 144
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ + GLD V ++A +Y+ ++ + + + + + +
Sbjct: 145 LELEDYSFGFAAQAGLDVQVTGRWYVNADVKYV-----TIRSDVKAGGTKVSEVRVDPWL 199
Query: 234 ASLGINMHF 242
G+ F
Sbjct: 200 IGGGVGYRF 208
>gi|14578724|gb|AAK68969.1| major outer membrane protein [Pectobacterium cacticida]
Length = 150
Score = 41.7 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 31/89 (34%), Gaps = 10/89 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ S N+ + G S + +G++Y + + + Y+++
Sbjct: 4 YTRLGGLVWRAAHSQNADDTGLNDHNTGISPLAAVGVEYAITKNWATRLDYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMH 241
N D + + + ++ S+ ++
Sbjct: 58 ----NNIGDAGTIGDRPDNNLLSVSVSYR 82
>gi|293395923|ref|ZP_06640204.1| outer membrane protein OprG [Serratia odorifera DSM 4582]
gi|291421421|gb|EFE94669.1| outer membrane protein OprG [Serratia odorifera DSM 4582]
Length = 218
Score = 41.7 bits (96), Expect = 0.082, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 3/102 (2%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D + D V GLDY ++ L+
Sbjct: 120 DKLRPYLGVGVNYTTFFDEKFNDNGKGAGLSNLSLKDSW--GVAAQAGLDYNLDEHWMLN 177
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ V +A + +D + + + G F
Sbjct: 178 MSVWWMNIETK-VRFDDAAGEHHSIDTRLDPWVFMFGAGYRF 218
>gi|14578692|gb|AAK68953.1| major outer membrane protein [Brenneria rubrifaciens]
Length = 147
Score = 41.7 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 27/90 (30%), Gaps = 10/90 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ D G S + +G++Y + + ++ +Y++I
Sbjct: 4 YTRLGGIVWRADSHATQSGVDRNNDDTGLSPLAALGIEYAFDKNWAVRVNYQWI------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D V + + S G + F
Sbjct: 58 ----TNIGDAGTVGARPDNMFMSAGDSYRF 83
>gi|189347562|ref|YP_001944091.1| outer surface protein [Chlorobium limicola DSM 245]
gi|189341709|gb|ACD91112.1| outer surface protein, putative [Chlorobium limicola DSM 245]
Length = 195
Score = 41.7 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 53/185 (28%), Gaps = 17/185 (9%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + G + + + + D+
Sbjct: 28 YVGGSTGFAFMSGDKLTINGTYLGDPEYDTGAAFSGALGMDFDGYRLEGEVAYQKNEIDN 87
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ + + L ++ + G A V +L SD
Sbjct: 88 LGSDVSV-LSVMANGYLDFQLEKSKIIPFVSAGVSYANVDVDALGDDGSDGL-------- 138
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ LG G+ + V+ +++ A YRY + + +++ N+H G
Sbjct: 139 ---LAFQLGAGVGFQVSPTVTVDAKYRYFASADPEIEIGS-----SKLEMDINSHNLLFG 190
Query: 238 INMHF 242
+ F
Sbjct: 191 FRVSF 195
>gi|194099372|ref|YP_002002472.1| outer membrane protein [Neisseria gonorrhoeae NCCP11945]
gi|193934662|gb|ACF30486.1| outer membrane protein [Neisseria gonorrhoeae NCCP11945]
Length = 222
Score = 41.7 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 28/91 (30%), Gaps = 13/91 (14%)
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
GA S++ + + G+ + + +++L A YRY
Sbjct: 145 AGARGAGSAVRPSYKSTQDAHHQSNSIRRVGLGVIAGVGFDITPNLTLDAGYRYHNWGRL 204
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 205 E-------------NTRFKTHEASLGVRYRF 222
>gi|188584564|ref|YP_001928009.1| porin [Methylobacterium populi BJ001]
gi|179348062|gb|ACB83474.1| porin opacity type [Methylobacterium populi BJ001]
Length = 286
Score = 41.7 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 29/117 (24%), Gaps = 15/117 (12%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESD-------------NSKNAKGRFDGHGSSVVL 185
+ Y G G A S + + + + L
Sbjct: 158 TWYGFTPYVGAGVGFADKRMSRNYTQTTCLIDGCDGLEGTGPRNAAFRANHSVTTFAWAL 217
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL Y + SL A+YRYI D N +G+ F
Sbjct: 218 TAGLSYDIGAGFSLDAAYRYINLGKVRSGFDEYGGATRLKDLAANE--FRVGLRYRF 272
>gi|222054709|ref|YP_002537071.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221563998|gb|ACM19970.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 474
Score = 41.7 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 20/154 (12%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
G+ G+N +G+ A+ +ST ++ YG VL + + L+ Y
Sbjct: 55 YGVRGGYNFTKH---WGVEGLFDYARTESTRADQDINFYRYGGEVLLHVFPDNKLVPYLA 111
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
G+ G +++ +G+ + GIG Y + D++L A +R +
Sbjct: 112 AGYVGL--------------TRDPEGQHTVSKGAFDYGIGAKYFLTDDLALRADFRNMVF 157
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + E ++G+ F
Sbjct: 158 REGANVQRPGEYHDEGTGFNYE---YTIGLAWQF 188
>gi|170741254|ref|YP_001769909.1| porin opacity type [Methylobacterium sp. 4-46]
gi|168195528|gb|ACA17475.1| porin opacity type [Methylobacterium sp. 4-46]
Length = 270
Score = 41.7 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 2/87 (2%)
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
D+ V +++A+ + GL Y +SL ASYRY+
Sbjct: 171 CGDTQPTYVIGPQTRDARASRTITTFAWAAMAGLSYDFGNGLSLDASYRYLDIGKARTGF 230
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
+ D N +G+ F
Sbjct: 231 DAYSGNTRLKDITANE--VRVGLRWAF 255
>gi|332876418|ref|ZP_08444187.1| hypothetical protein HMPREF0022_03840 [Acinetobacter baumannii
6014059]
gi|332735428|gb|EGJ66486.1| hypothetical protein HMPREF0022_03840 [Acinetobacter baumannii
6014059]
Length = 473
Score = 41.7 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G ++ + + K + + +G+G Y + D L A Y ++
Sbjct: 298 VGRLNHKFANGSMLSGRSFVAEKRTNNDSEWAWGVGLGGKYQITPDTLLKADYYHVKGDG 357
Query: 211 HSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ SN+ ++ + SLGI F
Sbjct: 358 RFLLWSNSGYAIDDQNNMHSNEFDTVSLGITHQF 391
>gi|262164413|ref|ZP_06032151.1| outer membrane protein W precursor [Vibrio mimicus VM223]
gi|262026793|gb|EEY45460.1| outer membrane protein W precursor [Vibrio mimicus VM223]
Length = 214
Score = 41.7 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + ++ Y G D + + D + G+DYM+N
Sbjct: 112 FGEANSTIRPYVGAGLNYTTFFDEGFNSIGEGAGLSDLKLDDSW--GLAANAGVDYMLND 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + SD + D K N + + F
Sbjct: 170 SWFLNASVWYANIETTATYKAG--SDAKSTDVKINPWVFMIAGGYKF 214
>gi|254472929|ref|ZP_05086327.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211957650|gb|EEA92852.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 192
Score = 41.7 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 28/190 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKD 115
YV + + + + N+ G +G +F G+ A
Sbjct: 27 WYV--QGTGGLSLGSITEDVKGGDDNTFKDEGFSGRIGAGAYVYNNFRIGLEGGYAAFSK 84
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
++T + D++ A Y ++ + G G +++ + V+S +
Sbjct: 85 NATDIDV-------WDILAVAYYDFENETAFTPFVGLGAGLSHMKIDFDDGVDSFKNTTN 137
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
LG G+ Y ++ ++ L A Y + + V N VD + +
Sbjct: 138 HFSTK-------LGAGVGYEISENLELLAEYSFQYNFKTKVTN--------GVDVTAHQN 182
Query: 233 IASLGINMHF 242
++G+ F
Sbjct: 183 QFNVGLRYSF 192
>gi|320158543|ref|YP_004190921.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|319933855|gb|ADV88718.1| membrane protein [Vibrio vulnificus MO6-24/O]
Length = 191
Score = 41.7 bits (96), Expect = 0.088, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 55/210 (26%), Gaps = 36/210 (17%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNI 97
A D E SG Y+G I T D + N + + G+
Sbjct: 12 SAFAQANTNDIEKKDVSGFYLGGGIG---TTTAFDDGVGTNDLNLKSNDSTYKLYGGY-- 66
Query: 98 QLEDFVFGINCHTTAAKD--DSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGA 154
Q V I T D ++ GY+ DS + G G
Sbjct: 67 QFNRIV-AIEAQYTRYGDIYSKDDADRHMVKPESIALMANLGYTFDSGWRPFATVGLGRT 125
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASYRYIPHHIHS 212
+ G +S G+G +Y +++ +Y + S
Sbjct: 126 ELD---------------FGPLSKTETSFRAGVGGEYSPKAIENLNFRVAY-----EVDS 165
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D D G++ F
Sbjct: 166 FMFDNGPRD----DINIVLGSLYAGVSYKF 191
>gi|149911546|ref|ZP_01900160.1| Outer membrane protein [Moritella sp. PE36]
gi|149805391|gb|EDM65401.1| Outer membrane protein [Moritella sp. PE36]
Length = 193
Score = 41.7 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 52/169 (30%), Gaps = 24/169 (14%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
+ SG Y+G + T+ DT + + + + + G+
Sbjct: 12 AIALSVNVQANQDVSGFYLGAGVG---TTNVDTDTNGYSSNSDTDGSTVKLLGGYQF--- 65
Query: 101 DFVFGINCHTTAAKDDSTFYRLKEKYFI---YGDVVLKAGYSVDSLL-IYGMGGFGGAYV 156
+ + I T D + + Y + GY+ ++ L + G +
Sbjct: 66 NRIVAIEAQYTKYGDITPLSNFSKTYQWSPTTVSLAANLGYTFENGLRPFATIGLSSLDL 125
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASY 203
+S K D +++ G GL+Y +S A Y
Sbjct: 126 DESI------------KTIDDSSATALRFGAGLEYTPAALSGVSFRAGY 162
>gi|296104776|ref|YP_003614922.1| Opacity protein and surface antigens-like protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295059235|gb|ADF63973.1| Opacity protein and surface antigens-like protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 227
Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 37/111 (33%), Gaps = 11/111 (9%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY V +YG G G + + N+ + LG G+ Y
Sbjct: 124 LGYGVS---VYGTAGLGVSKIKAGGW----QGNAGREYASTTQSNLTYALGAGVSYTPVE 176
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA----SLGINMHF 242
+ + YRYI +N + D + AHI +LG+ F
Sbjct: 177 RLYVDLGYRYIDMGKIESGYNNFTNARGLKDEQMKAHIVSNEFTLGMRYVF 227
>gi|254788240|ref|YP_003075669.1| hypothetical protein TERTU_4418 [Teredinibacter turnerae T7901]
gi|237686511|gb|ACR13775.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
Length = 185
Score = 41.7 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 51/157 (32%), Gaps = 21/157 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-------FGIN 107
SG Y G + + + L N + + G+ +L +V G++
Sbjct: 22 SGFYAGGNANFIDGNATLG------AGNDVEFRSIEAFGGY--KLNGWVGGETRTGLGLS 73
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + ++ Y + + + +YG+ G + D
Sbjct: 74 GESYSIGTGDAQQNIELGIDYYQSIYYRVEKANQVAKLYGLVGATFLQ------WGRDVD 127
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+ + G+G+ +++N + +L+ YR
Sbjct: 128 YMDGSTLEDSYTETGFSYGLGVGFVMNENTNLNFEYR 164
>gi|332852014|ref|ZP_08433881.1| hypothetical protein HMPREF0021_01454 [Acinetobacter baumannii
6013150]
gi|332871767|ref|ZP_08440207.1| hypothetical protein HMPREF0020_03862 [Acinetobacter baumannii
6013113]
gi|332729591|gb|EGJ60929.1| hypothetical protein HMPREF0021_01454 [Acinetobacter baumannii
6013150]
gi|332731237|gb|EGJ62535.1| hypothetical protein HMPREF0020_03862 [Acinetobacter baumannii
6013113]
Length = 473
Score = 41.7 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G ++ + + K + + +G+G Y + D L A Y ++
Sbjct: 298 VGRLNHKFANGSMLSGRSFVAEKRTNNDSEWAWGVGLGGKYQITPDTLLKADYYHVKGDG 357
Query: 211 HSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ SN+ ++ + SLGI F
Sbjct: 358 RFLLWSNSGYAIDDQNNMHSNEFDTVSLGITHQF 391
>gi|296104524|ref|YP_003614670.1| putative outer membrane protein A [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058983|gb|ADF63721.1| putative outer membrane protein A [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 204
Score = 41.7 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 62/200 (31%), Gaps = 41/200 (20%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN---------GLGIELGHNIQLEDFVFGIN 107
Y G + + A+T ++ + N+ N G G+ G+ Q+ + +
Sbjct: 28 WYSGAKFG--WSHYFDANTGSKASDNNNGSNQYNIDHDNVGGGVYAGY--QMTPW-LALE 82
Query: 108 CHTTAAKD----DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLE 162
+ + K + LKA Y+V DS IYG G
Sbjct: 83 GGYDYLGNMQIKGKHSAGAQMKSQGL-QMSLKASYAVTDSWDIYGRAGAMAYRAESDVSG 141
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ G + +G +Y N +++ Y+++ + +
Sbjct: 142 HNRFE-----------TGVRPLAAVGTEYAFNKNLAGRLEYQWV----------SNVGNA 180
Query: 223 ERVDRKGNAHIASLGINMHF 242
++ + + G+ F
Sbjct: 181 NQIGVSSDVSSVTAGLTWRF 200
>gi|258622602|ref|ZP_05717624.1| outer membrane protein OmpW [Vibrio mimicus VM573]
gi|258585302|gb|EEW10029.1| outer membrane protein OmpW [Vibrio mimicus VM573]
Length = 214
Score = 41.7 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + ++ Y G D + + D + G+DYM+N
Sbjct: 112 FGEANSTIRPYVGAGLNYTTFFDEGFNSTGEGANLSDLKLDDSW--GLAANAGVDYMLND 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + A D + D K N + + F
Sbjct: 170 SWFLNASVWYANIETTATYKAGA--DAKSTDVKINPWVFMIAGGYKF 214
>gi|37624570|gb|AAQ96081.1| outer membrane protein II [Hafnia alvei]
Length = 162
Score = 41.7 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + +K + G S + IG++Y +N D + Y+++ + D
Sbjct: 17 DGSANSATKGRYIDSNDTGVSPLAAIGVEYALNKDWATRLDYQFV----------SNIGD 66
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + S+G+ F
Sbjct: 67 ANETAARPDNTLLSVGVTYRF 87
>gi|238919586|ref|YP_002933101.1| outer membrane protein W [Edwardsiella ictaluri 93-146]
gi|238869155|gb|ACR68866.1| outer membrane protein W [Edwardsiella ictaluri 93-146]
Length = 213
Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 3/107 (2%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + D L Y G ++S ++ + + D V GLDYMV+
Sbjct: 110 FGRAEDKLRPYLGVGVNYTTFFNNSFDQNATSLGLHDLKATDSW--GVAGQAGLDYMVSE 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++AS YI V ++ ++ N + G F
Sbjct: 168 NWMINASVWYISIDTK-VKFRDSSDSQHSINTNINPWVFMFGAGYRF 213
>gi|91215125|ref|ZP_01252097.1| OmpW family protein [Psychroflexus torquis ATCC 700755]
gi|91186730|gb|EAS73101.1| OmpW family protein [Psychroflexus torquis ATCC 700755]
Length = 215
Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 1/91 (1%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH- 211
+ +D A + + GLDY +N L+ +Y+
Sbjct: 125 YLGAGLNYTLFYSADEGPTADDVSYDNSVAFAFQAGLDYDLNEKWFLNVDAKYLTLSTDA 184
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V+ + A D N I +GI M F
Sbjct: 185 TVDATTALGATVGADVDINPLIIGVGIGMRF 215
>gi|37624572|gb|AAQ96082.1| outer membrane protein II [Hafnia alvei]
Length = 162
Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + +K + G S + IG++Y +N D + Y+++ + D
Sbjct: 17 DGSANSATKGRYIDSNDTGVSPLAAIGVEYALNKDWATRLDYQFV----------SNIGD 66
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + S+G+ F
Sbjct: 67 ANETAARPDNTLLSVGVTYRF 87
>gi|262173462|ref|ZP_06041139.1| outer membrane protein W precursor [Vibrio mimicus MB-451]
gi|261890820|gb|EEY36807.1| outer membrane protein W precursor [Vibrio mimicus MB-451]
Length = 214
Score = 41.7 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + ++ Y G D + D + G+DYM+N
Sbjct: 112 FGEANSTIRPYVGAGLNYTTFFDEGFNSTGEGAGLSDLKLDDSW--GLAANAGVDYMLND 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + A D + D K N + + F
Sbjct: 170 SWFLNASVWYANIETTATYKAGA--DAKSTDVKINPWVFMIAGGYKF 214
>gi|326568251|gb|EGE18333.1| Opa-like protein A [Moraxella catarrhalis BC8]
Length = 234
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 58/202 (28%), Gaps = 26/202 (12%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG------INCH 109
G YV + D G GI G + L + IN
Sbjct: 44 GYYVQADLGYSNLEAKYNDNRPNDNKLEDKGLGYGISFGKDTDLARYALDYTNYGKINSS 103
Query: 110 TTAAKDDSTFYRLKEKYFIYG-DVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVE 165
T +T + + + L A Y D+ Y G + +
Sbjct: 104 YTYQPQTNTNTSIISSGELKAQSLGLSAIYDFDTVSGFTPYAGARVGINQIKSTVSTVTT 163
Query: 166 SDNSKNAKGRFDG-HGSSVVLGIGLDYMVNY--DISLSASYRYIPHHIHSVNNSNAKSDV 222
+ ++++ + + G Y++N ++ Y Y+ K D
Sbjct: 164 TTSAQSTTHSQKQENKVGFGVLAGAQYVINPQLNVDAGVEYNYL-----------GKYDK 212
Query: 223 ERVDRKGNAHI--ASLGINMHF 242
D K AH A +G+ +F
Sbjct: 213 LDTDSKLKAHQYGAKVGLRYNF 234
>gi|37624566|gb|AAQ96079.1| outer membrane protein II [Hafnia alvei]
Length = 162
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + +K + G S + IG++Y +N D + Y+++ + D
Sbjct: 17 DGSANSATKGRYIDSNDTGVSPLAAIGVEYALNKDWATRLDYQFV----------SNIGD 66
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + S+G+ F
Sbjct: 67 ANETAARPDNTLLSVGVTYRF 87
>gi|207721846|ref|YP_002252284.1| outer membrane protein w-related protein [Ralstonia solanacearum
MolK2]
gi|206587013|emb|CAQ17597.1| outer membrane protein w-related protein [Ralstonia solanacearum
MolK2]
Length = 224
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 24/101 (23%), Gaps = 10/101 (9%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G + V+ + L G DY + I
Sbjct: 134 RFKPYLGAGLNYTRI-----SGVDLQVPGVGPLDLSRNSFGPALQAGFDYRLTDRI---- 184
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + ++ + + + + +G+ F
Sbjct: 185 -YLNVDIKKTWISADVKLAGQTISKVRVDPWLVGVGLGYRF 224
>gi|83748200|ref|ZP_00945227.1| Outer membrane protein [Ralstonia solanacearum UW551]
gi|207744524|ref|YP_002260916.1| outer membrane protein w-related protein [Ralstonia solanacearum
IPO1609]
gi|83725168|gb|EAP72319.1| Outer membrane protein [Ralstonia solanacearum UW551]
gi|206595930|emb|CAQ62857.1| outer membrane protein w-related protein [Ralstonia solanacearum
IPO1609]
Length = 224
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 24/101 (23%), Gaps = 10/101 (9%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G + V+ + L G DY + I
Sbjct: 134 RFKPYLGAGLNYTRI-----SGVDLQVPGVGPLDLSRNSFGPALQAGFDYRLTDRI---- 184
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + ++ + + + + +G+ F
Sbjct: 185 -YLNVDIKKTWISADVKLAGQTISKVRVDPWLVGVGLGYRF 224
>gi|328470084|gb|EGF40995.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus
10329]
Length = 325
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 44/191 (23%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV---FGIN--CHTTA 112
Y+G + + L D G+ +G+N ++V +G++ TA
Sbjct: 26 YIGGKVGY----NSLNDACYLNEPCDDDSFAAGMHIGYN--FNEYVAAEYGVDYLGDFTA 79
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + K + DS ++ G D
Sbjct: 80 NFKKPGLNTVDGDL-WALTLAPKFNLPLTDSWNLFAKVGVAYMMAGDEKDFVPTGS---- 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+G +Y +NY+ SL A Y+ + +
Sbjct: 135 ---------------LGAEYKINYNWSLRAEYQRYQDMSDDIIDDMDSDFFG-------- 171
Query: 232 HIASLGINMHF 242
+G N F
Sbjct: 172 ----IGFNYKF 178
>gi|160871795|ref|ZP_02061927.1| putative outer membrane protein OmpA [Rickettsiella grylli]
gi|159120594|gb|EDP45932.1| putative outer membrane protein OmpA [Rickettsiella grylli]
Length = 200
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 24/192 (12%), Positives = 49/192 (25%), Gaps = 23/192 (11%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK- 114
G Y+ + + +S GL + Q + + A
Sbjct: 26 GAYIEGQLGYAHTGTRFIKPFPSGKVDSKYQGGLAGRVAIGYQFNPNLAAEMGYLQLADQ 85
Query: 115 ----DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + V D +Y G S + K
Sbjct: 86 EAKLKSPVNQSITINQHAFDLVGKGILPLSDKFNLYAKAGVAYLVTDLSGDTINQHSIIK 145
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ GIGL Y V ++ + ++ +I ++ N
Sbjct: 146 PVA----KQSWAPEAGIGLTYNVTPNMFIDTAFTHIQP--------------IGKNKPSN 187
Query: 231 AHIASLGINMHF 242
++A++G+ F
Sbjct: 188 INMATIGLGFTF 199
>gi|148975146|ref|ZP_01812070.1| outer membrane protein W [Vibrionales bacterium SWAT-3]
gi|145965070|gb|EDK30320.1| outer membrane protein W [Vibrionales bacterium SWAT-3]
Length = 213
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D SL + D + D + IG+DYM+N
Sbjct: 111 FGQANSDFRPYVGAGINYTVFFDESLNQGAKDLGLSDLSLDDSW--GLAANIGMDYMINE 168
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D L+AS Y + N + D + + +G +F
Sbjct: 169 DWFLNASVWYADIGTTAKYKFNGQQ--FSTDVDIDPWVFMIGGGYNF 213
>gi|2315235|emb|CAA44823.1| Opa1800 outer membrane protein [Neisseria meningitidis]
Length = 267
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 27/125 (21%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG------------- 186
D Y +V +K ++
Sbjct: 156 FDKFKPYIGARVAYGHVKHQVHSVETKTTIVTSKPTATSPQGGPIIQTDPSKPPYHESHS 215
Query: 187 ---------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G+ + + ++L YRY + + H SLG
Sbjct: 216 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 262
Query: 238 INMHF 242
+ HF
Sbjct: 263 MRYHF 267
>gi|126728150|ref|ZP_01743966.1| hypothetical protein SSE37_19207 [Sagittula stellata E-37]
gi|126711115|gb|EBA10165.1| hypothetical protein SSE37_19207 [Sagittula stellata E-37]
Length = 217
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 34/103 (33%), Gaps = 10/103 (9%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
Y GG G A+ + NS + F G + L G Y +N S+
Sbjct: 125 WGKTTPYVGGGLGVAFPHVDA-----KHNSGSRTYGFQVTGPAARLMAGASYPINDRFSV 179
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y++ +N D + ++GI+M F
Sbjct: 180 FGEYQF-----TYSSNEGEFDDGGTFKTDIKTNALNVGISMKF 217
>gi|116694040|ref|YP_728251.1| OmpW family porin [Ralstonia eutropha H16]
gi|113528539|emb|CAJ94886.1| Porin, OmpW family [Ralstonia eutropha H16]
Length = 214
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 13/102 (12%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y G + ++ + N + D L IG+DY + + L+
Sbjct: 126 GTFRPYIGAGL--------NFTRIWGADIANNSLQLDSWSVGPALQIGMDYKLTKNWFLN 177
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A +++ DV+ + + S+G+ F
Sbjct: 178 A-----DIKKIWLSSDVKAGDVKVSKVNLDPWLFSMGVGYRF 214
>gi|121635424|ref|YP_975669.1| Opa1800 outer membrane protein precursor [Neisseria meningitidis
FAM18]
gi|120867130|emb|CAM10897.1| Opa1800 outer membrane protein precursor [Neisseria meningitidis
FAM18]
Length = 272
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 27/125 (21%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG------------- 186
D Y +V +K ++
Sbjct: 161 FDKFKPYIGARVAYGHVKHQVHSVETKTTIVTSKPTATSPQGGPIIQTDPSKPPYHESHS 220
Query: 187 ---------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G+ + + ++L YRY + + H SLG
Sbjct: 221 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 267
Query: 238 INMHF 242
+ HF
Sbjct: 268 MRYHF 272
>gi|417412|sp|Q04884|OPAH_NEIGO RecName: Full=Opacity protein opA60; Flags: Precursor
gi|940801|emb|CAA79372.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 238
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++N + + G+ + + ++L A YRY
Sbjct: 166 NGAVTTYNTDPKTQNDYQSNSIRRVGLGVIAGVGFDITPKLTLDAGYRYHNWGRLE---- 221
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 222 ---------NTRFKTHEASLGVRYRF 238
>gi|254448373|ref|ZP_05061834.1| OmpA domain protein transmembrane region-containing protein,
putative [gamma proteobacterium HTCC5015]
gi|198261986|gb|EDY86270.1| OmpA domain protein transmembrane region-containing protein,
putative [gamma proteobacterium HTCC5015]
Length = 187
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 49/185 (26%), Gaps = 29/185 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + + N + LG QL V GI T
Sbjct: 32 YLGANYGGYKSRG-----GEFEEDNDFVQGILG------FQLLP-VLGIEFDYTDFGQAQ 79
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
E VV + S D L + GG + +S
Sbjct: 80 NRISSVEIDGYGASVVGRIPLSEDFSL-FAKGGRFYWDAEVQAFGVKDSFEGDEPY---- 134
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G G+ + ++ + + Y + + V +++ D D + G
Sbjct: 135 -------YGAGMTFSISDAVDFNLEY-----NRYEVELKSSQIDNRLSDEDSDIDTLKAG 182
Query: 238 INMHF 242
+ F
Sbjct: 183 VRFKF 187
>gi|227823301|ref|YP_002827273.1| hypothetical protein associated with outer membrane protein,
beta-barrel [Sinorhizobium fredii NGR234]
gi|227342302|gb|ACP26520.1| hypothetical protein associated with outer membrane protein,
beta-barrel [Sinorhizobium fredii NGR234]
Length = 272
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 29/108 (26%), Gaps = 11/108 (10%)
Query: 143 LLIYGMGGFGGAYVIDSSL----------EKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
Y G G ++ +++ + D + L G+ Y
Sbjct: 163 FTPYVGAGIGATHIDWNTVHEGSVCVAGGGACSGATGGTSYVGRDSWRFTYALMAGVSYD 222
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ + YRY + S+ + D + H G+
Sbjct: 223 ITDRLKFDVGYRYSHIADGDM-FSSGSEGAKGYDDGLSRHEIRAGLRF 269
>gi|253989529|ref|YP_003040885.1| outer membrane protein W [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253780979|emb|CAQ84141.1| outer membrane protein w [Photorhabdus asymbiotica]
Length = 213
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 2/107 (1%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G Y G + + N V +GLDY ++
Sbjct: 109 FGSKESQFRPYVGIGLNYTTFFNEKFNGNSAVRDNNLHSLDLKDSWGVAGHVGLDYELDQ 168
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+AS ++ + + ++D + + + G+ HF
Sbjct: 169 NWMLNASVWWVNVETDVKFKAGDQ--KYKIDTRLDPWVFMFGVGYHF 213
>gi|325207962|gb|ADZ03414.1| opacity porin family protein [Neisseria meningitidis NZ-05/33]
Length = 221
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 29/119 (24%), Gaps = 30/119 (25%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV---------------- 184
D Y +V + + +
Sbjct: 116 DKFKPYIGARVAYGHVKHQVNSVNKETITVTPVASGGPVITGPTSKPAYHESHSIRRLGL 175
Query: 185 -LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ G+ + + +++L A YRY + + H ASLG+ F
Sbjct: 176 GVIAGVGFDITSNLTLDAGYRYHNWGRLE-------------NTRFKTHEASLGVRYRF 221
>gi|15837474|ref|NP_298162.1| outer membrane protein [Xylella fastidiosa 9a5c]
gi|9105784|gb|AAF83682.1|AE003927_1 outer membrane protein [Xylella fastidiosa 9a5c]
Length = 181
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 39/130 (30%), Gaps = 8/130 (6%)
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ +K + G + + + G+ A ++L + N N
Sbjct: 60 TDASGKIGNVTQKTPLALSAQYHFGQAQNVFRPFFGVGYSQAKSKFTALGSTDRVNLGNF 119
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+G IGLD V+ + RY + + + S +R+ +
Sbjct: 120 RGAIGT--------IGLDMNVDSNWFARLDARYTRFSNSNSKAALSSSLGLDQNRRLDPW 171
Query: 233 IASLGINMHF 242
GI F
Sbjct: 172 SVGFGIGARF 181
>gi|293393264|ref|ZP_06637579.1| porin [Serratia odorifera DSM 4582]
gi|291424410|gb|EFE97624.1| porin [Serratia odorifera DSM 4582]
Length = 227
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 11/111 (9%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY ++ G G + + + V S + + +G G+ Y
Sbjct: 124 LGYGFS---VFATAGVGISKIKAGGWQGVPSR----EYDSTSQNNFTYAIGGGVSYAPIE 176
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA----SLGINMHF 242
+++ YRY+ + + D + AH+ +LG+ F
Sbjct: 177 RLNVDLGYRYVDMGKIESGYNRFANARGLKDEQMKAHLVSNEFTLGVRYLF 227
>gi|149191465|ref|ZP_01869715.1| hypothetical protein VSAK1_21999 [Vibrio shilonii AK1]
gi|148834734|gb|EDL51721.1| hypothetical protein VSAK1_21999 [Vibrio shilonii AK1]
Length = 189
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 55/188 (29%), Gaps = 24/188 (12%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG L + N + + + L + G+ + + + T
Sbjct: 25 GFYVGG--GYGLVKSKLKNLDNDNSESLDAGHSLRVYGGYAF---NRIVSLEGSYTKYGK 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ + GY+ DS + G + ++ +K SD
Sbjct: 80 TEEDHGYTWDPTTL-ALTANLGYTFDSGFRPFATVGLSYLDLNEAGDKKFTSD------- 131
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G++ GIG++YM L Y N +SD N
Sbjct: 132 ----TGTAFRYGIGVEYMPAQVEGLGIRLAYEADAFKIENLQGHRSDT------LNIGSL 181
Query: 235 SLGINMHF 242
LG + F
Sbjct: 182 YLGASYKF 189
>gi|86146267|ref|ZP_01064592.1| Outer membrane protein [Vibrio sp. MED222]
gi|85835978|gb|EAQ54111.1| Outer membrane protein [Vibrio sp. MED222]
Length = 205
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 40/144 (27%), Gaps = 19/144 (13%)
Query: 56 GNYVGLHISRLYETHPLADT----INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G Y+G + + T + G+ I + + GI T
Sbjct: 25 GFYIG--VGAGSTELDDGGFGKAITRKTTTTETESPSYKLIAGYQI---NRIIGIEGQYT 79
Query: 112 AAKDDSTFYRLK---EKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
+T F V GY+ D L Y + G+ + +
Sbjct: 80 KYGTSTTKVGSSKAFTTDFSSISVAANVGYTFDIGLRPYALLGYSFLNSEIENSGNNKY- 138
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDY 191
S + +G+G++Y
Sbjct: 139 -----FATKSSTVSGIKMGVGVEY 157
>gi|261253628|ref|ZP_05946201.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
gi|260937019|gb|EEX93008.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
Length = 324
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 19/188 (10%), Positives = 47/188 (25%), Gaps = 42/188 (22%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKD 115
YVG + + + + G +G+ I
Sbjct: 23 LYVGGKVGKSWLDDACTTATANCDD---EASTAGAFIGYEMWDF----LSIEGGYDYLGK 75
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ +K + + K + + + +YG G
Sbjct: 76 FTADGLNDDKVEAF-TLAPKLNLPITNDISLYGKFGGAYVKYG----------------- 117
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
S + G+++ + ++++ Y+ +D + + A
Sbjct: 118 --SEEDYSYLGAAGIEFDSHENVTVRVEYQ-------------TITDANNDKVRAMGNSA 162
Query: 235 SLGINMHF 242
+LG F
Sbjct: 163 TLGFVYKF 170
>gi|254499079|ref|ZP_05111771.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
gi|254351706|gb|EET10549.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
Length = 218
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/197 (10%), Positives = 50/197 (25%), Gaps = 22/197 (11%)
Query: 57 NYVGLHISRLYETHPLADT----------INRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
YVGL T ++ G+ G+ + + F +
Sbjct: 33 LYVGLIGGYGSTTWQGLVPQTKNQNMALSMSTPIDVEEGGATWGVFAGY--EFSPY-FAV 89
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+ D + ++ + D L+ D + + G + +
Sbjct: 90 EANYMRYADSTVYFDGTSIFTFEHDGELQLTTKTDGISLIGKIMLLIPHSNFKVYSSAGA 149
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSNAKSDVERV 225
D S G+G++Y + + Y ++ +++
Sbjct: 150 TTLYRRDMLVDDWRVSPTFGVGVNYNFTEHLMGEIAGNYTAGFGESQLSPADSYFPF--- 206
Query: 226 DRKGNAHIASLGINMHF 242
+ + I F
Sbjct: 207 -----LYSITARIAYRF 218
>gi|212636128|ref|YP_002312653.1| hypothetical protein swp_3364 [Shewanella piezotolerans WP3]
gi|212557612|gb|ACJ30066.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 178
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 57/208 (27%), Gaps = 37/208 (17%)
Query: 36 LFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH 95
+ +G Y+G + ++H L I+ G+
Sbjct: 7 MTLATALTTVLAAPMAANATGFYLGANAGSGQQSHQLMKKAETTG-------VAAIKAGY 59
Query: 96 NIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGA 154
+ + FG S+ + + V K Y + + +YG+ G A
Sbjct: 60 DF---NDYFGAELRYGGVNKRSS----DIELNSFTSVYAKVQYPITESISVYGLAGMTAA 112
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ L V +K + G SS G G+ Y V +S I H
Sbjct: 113 DLPQDILIAV-----PQSKAKSSGSESSASFGAGVRYAVTDSFGISLEAMRISSHDA--- 164
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
LG++ F
Sbjct: 165 --------------YKLDAVMLGVDYKF 178
>gi|14578706|gb|AAK68960.1| major outer membrane protein [Brenneria quercina]
Length = 146
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 10/89 (11%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
Y + + G S + IGL+Y V + + Y+++ H
Sbjct: 3 VYTRLGGFFWRADSHDDVTGRGGNDTGISPLGCIGLEYAVTKNWATRLDYQWVEQHWWQC 62
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 63 TVGG----------RPDNGMLSVGVSYRF 81
>gi|152981449|ref|YP_001352915.1| outer membrane protein W [Janthinobacterium sp. Marseille]
gi|151281526|gb|ABR89936.1| outer membrane protein W [Janthinobacterium sp. Marseille]
Length = 206
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 11/98 (11%), Positives = 32/98 (32%), Gaps = 13/98 (13%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G + ++ S + N + + L G+D+ ++ + S++
Sbjct: 122 PYVGAGI--------NYTRISSVDLLNGAATLEKSSVGLALQAGVDFKIDKNWSINL--- 170
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + K + + +G+ F
Sbjct: 171 --DVKKVQIRSDVNTAAGQLSAVKVDPWLVGVGVGYRF 206
>gi|149773177|dbj|BAF64763.1| outer membrane protein A [Shewanella livingstonensis]
Length = 385
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 53/180 (29%), Gaps = 10/180 (5%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+ YVG + + P + G+ ++V GI
Sbjct: 39 TPWYVGGGLGVNNYEPSCDQKTMKVCGED-DPYAWDVFGGY--LFNEYV-GIELGYR--- 91
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D + DV + G S+ + Y + + + S+ +
Sbjct: 92 -DLGRAEWTDYSNKRNDVGAR-GMSLGFVGFYPLADKWSLSAEAGAFNYLISNKKEYNTE 149
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ G + LG G+ Y ++ L A Y RY N + +S+ ++
Sbjct: 150 YYSDSGIAPYLGAGIGYNFTDNLKLQAKYRRYENLDEEKWNTLSMESNYWGLELSYRFGT 209
>gi|17547686|ref|NP_521088.1| outer membrane signal peptide protein [Ralstonia solanacearum
GMI1000]
gi|17429990|emb|CAD16674.1| probable outer membrane w-related protein signal peptide [Ralstonia
solanacearum GMI1000]
Length = 224
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%), Gaps = 10/101 (9%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G + V+ + L G DY + +
Sbjct: 134 RFKPYLGAGLNYTRI-----SSVDLQVPGVGPLDLSRNSFGPALQAGFDYRLTDRV---- 184
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + ++ + + + +G+ F
Sbjct: 185 -YLNVDIKKTWISADVKLGGQTVSKVRIDPWLVGVGLGYRF 224
>gi|194334358|ref|YP_002016218.1| hypothetical protein Paes_1552 [Prosthecochloris aestuarii DSM 271]
gi|194312176|gb|ACF46571.1| conserved hypothetical protein [Prosthecochloris aestuarii DSM 271]
Length = 197
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 62/207 (29%), Gaps = 32/207 (15%)
Query: 52 GIWSGNYVGLHISRLY-----ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
+W Y+ + + T D+ + L +G++ D+ +
Sbjct: 3 TVWPIAYMSGKLGLTWMDDVEFTSNWIDSTEGFDLGTDAGVTLSCAVGYD--FGDYRAEL 60
Query: 107 NCHT------TAAKDDSTFYRLKEKYF---IYGDVVLKAGYSVD----SLLIYGMGGFGG 153
T A D + E+ V+ K Y +D L + GF
Sbjct: 61 ELGYQSNDVDTWADSDDGYVSDAEEAGGEVFVISVMAKGAYDIDLGGVELSPFVGAGFAF 120
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
D+ + S+ + +G L V I L YRY+ +
Sbjct: 121 ISFDDAPVCFSGSE-----YRSKSATTFAYQIGASLALPVADTILLEGRYRYLGTANFNF 175
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINM 240
+ A++D +H A +G+
Sbjct: 176 DRPEAEADFA-------SHSALVGLRF 195
>gi|91224215|ref|ZP_01259478.1| putative outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269965628|ref|ZP_06179741.1| putative outer membrane protein OmpA [Vibrio alginolyticus 40B]
gi|91191126|gb|EAS77392.1| putative outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269829696|gb|EEZ83932.1| putative outer membrane protein OmpA [Vibrio alginolyticus 40B]
Length = 326
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 51/192 (26%), Gaps = 46/192 (23%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV---FGIN--CHTTA 112
Y+G + + L D + LG++ +V +G++ TA
Sbjct: 26 YMGGKVGY----NSLNDACYLNEPCDDDSFAASMHLGYS--FNKYVAAEYGVDYLGDFTA 79
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + K + DS ++ G D
Sbjct: 80 NFKKPGLNTVDGDL-WALTLAPKFNLPLTDSWNLFAKVGAAYMMAGDEKDFVPTGS---- 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGN 230
+G +Y +NY+ SL A Y RY + +
Sbjct: 135 ---------------LGAEYQINYNWSLRAEYQRYQDMSDDVIE-------------DMD 166
Query: 231 AHIASLGINMHF 242
+ +G N F
Sbjct: 167 SDFFGIGFNYKF 178
>gi|264680716|ref|YP_003280626.1| OmpW [Comamonas testosteroni CNB-2]
gi|299529396|ref|ZP_07042834.1| outer membrane protein W [Comamonas testosteroni S44]
gi|262211232|gb|ACY35330.1| OmpW [Comamonas testosteroni CNB-2]
gi|298722645|gb|EFI63564.1| outer membrane protein W [Comamonas testosteroni S44]
Length = 223
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 25/196 (12%), Positives = 51/196 (26%), Gaps = 26/196 (13%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD--------DSTF 119
L+ ++ ++ ++ G N QL + + A D +
Sbjct: 33 GVTHLSPDVSSGNLSAPSFPNTKVDAGSNTQLGGGITYMVTDNLALDVPLATPFKHDLSG 92
Query: 120 YRLKEKYFIYGDVVL---------KAGYSVDSLLIYGMGGFGGAYV----IDSSLEKVES 166
G + + + Y G A+ ++L +
Sbjct: 93 AGSIAGVGKLGSTKAIPATLMLQYRFNEAKAAFRPYLGVGVTYAHFYGEKTTATLNGLTG 152
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
N + +G Y N + ASY + S + +
Sbjct: 153 GTQANPTTAELDDKFGALAQLGFVYNFNERWFVDASY-----SKSFLKTKIHLSSGQSIS 207
Query: 227 RKGNAHIASLGINMHF 242
+ N + S+GI F
Sbjct: 208 VRLNPDVFSVGIGYRF 223
>gi|189426054|ref|YP_001953231.1| OmpW family protein [Geobacter lovleyi SZ]
gi|189422313|gb|ACD96711.1| OmpW family protein [Geobacter lovleyi SZ]
Length = 202
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 21/65 (32%), Gaps = 6/65 (9%)
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ + G D ++ + + Y+Y+ + + N H+ +G
Sbjct: 144 DNSVGWAVQAGTDLKISDSLYFNIDYKYLNADTKATIAG------TKYKLDLNPHLIGIG 197
Query: 238 INMHF 242
+ F
Sbjct: 198 VGYRF 202
>gi|163803132|ref|ZP_02197015.1| putative outer membrane protein OmpA [Vibrio sp. AND4]
gi|159173032|gb|EDP57865.1| putative outer membrane protein OmpA [Vibrio sp. AND4]
Length = 320
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/185 (11%), Positives = 48/185 (25%), Gaps = 32/185 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + L D + G+ +G+N + + +
Sbjct: 26 YVGGKLGY----NALNDACHLNAPCDDDSFAAGMHIGYNF---NEYVAAEYGVDYLGNFT 78
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ + GD+ + + + + + + D
Sbjct: 79 ANFNKAGLNTVDGDL-------------WALTLAPKFNLPVTDSWNLFAKVGAAYMMAGD 125
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+G +Y +NY+ SL A Y+ + + +G
Sbjct: 126 EKDFVPTGSLGAEYQINYNWSLRAEYQRYQDMSDDIIDDMDADFFG------------IG 173
Query: 238 INMHF 242
N F
Sbjct: 174 FNYKF 178
>gi|145298281|ref|YP_001141122.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|1332434|emb|CAA63036.1| outer membrane protein [Aeromonas salmonicida]
gi|142851053|gb|ABO89374.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|1588798|prf||2209353A major outer membrane protein OmpAI
Length = 339
Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 46/184 (25%), Gaps = 29/184 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + I +G+N FG +
Sbjct: 28 YFGA--GAGAAHFNGLNKIEGVKNGEENAAAANAFVGYNFNEN---FGSELGYLYTGRGN 82
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T E + + + GG A+
Sbjct: 83 TDGNRYENQGATLSGIARLPLG-GDFSAFAEGGAYWAHTDGM---------------GTS 126
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
S + G+G+ Y VN + L A YRY+ A + V K N +A+L
Sbjct: 127 DTKVSPLAGLGVTYQVNDALDLQARYRYMW--------DVADLHADNVRYKSNQSVATLE 178
Query: 238 INMH 241
H
Sbjct: 179 AVYH 182
>gi|332307270|ref|YP_004435121.1| hypothetical protein Glaag_2916 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174599|gb|AEE23853.1| hypothetical protein Glaag_2916 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 257
Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 67/216 (31%), Gaps = 38/216 (17%)
Query: 56 GNYVGLHISRLYETHPLA--------DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
G YV + + + D +++ GI LG+ F I
Sbjct: 36 GFYVSGQVGYSQQVNDSEAIGQNIAVDADFPAEFDAGDGVVGGIGLGYKFDEN---FRIE 92
Query: 108 CHTTAAKDD------STFYRLKEKYFIYG-----DVVLKAGYSVDS---LLIYGMGGFGG 153
+ + T R ++Y + G + ++ Y + Y G G
Sbjct: 93 GRLSYREGSFSETRFGTGAREGQEYILDGDIQSTTLTVEGFYDFPNKTAFTPYIKVGVGV 152
Query: 154 AYVIDSSLEKVES-----------DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+ S+ + D +A D + +G G +Y + SL
Sbjct: 153 SDNSYSARLGGQGVAGFDAFDGAVDGYYDAYADGDATQFTWNVGFGGNYQITQKFSLYGE 212
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
Y+Y + ++ +D ++D +H +GI
Sbjct: 213 YQYASFGDINT-GQDSFTDGFKID-DIASHEVVIGI 246
>gi|289209174|ref|YP_003461240.1| membrane protein involved in aromatic hydrocarbon degradation
[Thioalkalivibrio sp. K90mix]
gi|288944805|gb|ADC72504.1| membrane protein involved in aromatic hydrocarbon degradation
[Thioalkalivibrio sp. K90mix]
Length = 432
Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ Y++ Y ++ + + + DG +G Y +
Sbjct: 323 RDSYAIALGAEY-QANPQWTLRAGIQYDRTPTRDGFRSTRTPDGDRIWYTVGA--SYRAS 379
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDV-----ERVDRKGNAHIASLGINMHF 242
S Y YI S+ + ++V R +G+ H+ S G+ F
Sbjct: 380 DRFSFDFGYAYIDVGSESIELESEFAEVGVSTETRGRTRGDVHVLSAGLRYRF 432
>gi|332701384|ref|ZP_08421472.1| porin opacity type [Desulfovibrio africanus str. Walvis Bay]
gi|332551533|gb|EGJ48577.1| porin opacity type [Desulfovibrio africanus str. Walvis Bay]
Length = 224
Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 38/141 (26%), Gaps = 9/141 (6%)
Query: 106 INCHTTA-AKDDSTFYRLKEKYFI---YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
+ + D ++ + L A Y + I+ G +
Sbjct: 89 LELEYMGRSDFDYSYGNGTTNVDADIGVSTLFLNAYYDFRTSTIWQPYVGIGLGSAFHDI 148
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ S N N G + + +G G+ VN + L +RY N
Sbjct: 149 DAGVSGNYANFSGDDESSDLAWNIGAGVGLRVNPRVMLDLGWRYANFGTAKYNVRG---- 204
Query: 222 VERVDRKGNAHIASLGINMHF 242
V A G+ F
Sbjct: 205 -NTVSTDLRASEFLAGLRYEF 224
>gi|305666931|ref|YP_003863218.1| hypothetical protein FB2170_11751 [Maribacter sp. HTCC2170]
gi|88709159|gb|EAR01393.1| hypothetical protein FB2170_11751 [Maribacter sp. HTCC2170]
Length = 226
Score = 40.9 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 66/200 (33%), Gaps = 31/200 (15%)
Query: 56 GNYVGLHISR--LYETHPLADTINRKTYNSLLPNGLGIELGHNIQL--EDFVFGINCHTT 111
G Y+GL++ + + D + + G Q V G+
Sbjct: 45 GFYIGLNLGYQNFFGGALIDDLDVLAQESKFALD---FTPGFRKQFWKNKVVVGVEFLFG 101
Query: 112 AAKDDSTFYRLKEK------YFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLE 162
D T + + I + + AG ++ + L+Y G + L
Sbjct: 102 VTDGDLTTEDPRNQSLIIYENNIQTGLGVNAGIALGKQTNYLLYIYGQLARRNYDVTILN 161
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ ++ + + + F GIGL+ + + S+ + +VN + +
Sbjct: 162 QNQTVDQQEDQQNFKR------YGIGLEMPIWHHFSIK-----SMLGLTAVNFGDM---I 207
Query: 223 ERVDRKGNAHIASLGINMHF 242
+D + S+G+N F
Sbjct: 208 TNIDVQNQID-FSVGLNYQF 226
>gi|218709787|ref|YP_002417408.1| hypothetical protein VS_1799 [Vibrio splendidus LGP32]
gi|218322806|emb|CAV18983.1| hypothetical protein VS_1799 [Vibrio splendidus LGP32]
Length = 214
Score = 40.9 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 40/144 (27%), Gaps = 19/144 (13%)
Query: 56 GNYVGLHISRLYETHPLADT----INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G Y+G + + T + G+ I + + GI T
Sbjct: 34 GFYIG--VGAGSTELDDGGFGKAITRKTTTTETESPSYKLIAGYQI---NRIIGIEGQYT 88
Query: 112 AAKDDSTFYRLK---EKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
+T F V GY+ D L Y + G+ + +
Sbjct: 89 KYGTSTTKVGSSKAFTTDFSSISVAANVGYTFDIGLRPYALLGYSFLNSEIENSGNNKY- 147
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDY 191
S + +G+G++Y
Sbjct: 148 -----FATKSSTVSGIKMGVGVEY 166
>gi|240123880|ref|ZP_04736836.1| outer membrane protein [Neisseria gonorrhoeae PID332]
gi|268682504|ref|ZP_06149366.1| outer membrane protein [Neisseria gonorrhoeae PID332]
gi|268622788|gb|EEZ55188.1| outer membrane protein [Neisseria gonorrhoeae PID332]
Length = 161
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++N + + G+ + + ++L A YRY
Sbjct: 89 NGAVTTYNTDPKTQNDYQSNSIRRVGLGVIAGVGFDITPKLTLDAGYRYHNWGRLE---- 144
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 145 ---------NTRFKTHEASLGVRYRF 161
>gi|117574264|gb|ABK41116.1| OlpA [Moraxella catarrhalis]
gi|117574266|gb|ABK41117.1| OlpA [Moraxella catarrhalis]
gi|326564310|gb|EGE14540.1| Opa-like protein A [Moraxella catarrhalis 103P14B1]
gi|326573665|gb|EGE23623.1| Opa-like protein A [Moraxella catarrhalis O35E]
gi|326574713|gb|EGE24649.1| Opa-like protein A [Moraxella catarrhalis 101P30B1]
Length = 217
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 60/203 (29%), Gaps = 27/203 (13%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG------INCH 109
G YV + D G GI G + L + IN
Sbjct: 26 GYYVQADLGYSNLEAKYNDNRPNDNKLEDKGLGYGISFGKDTDLARYALDYTNYGKINSS 85
Query: 110 TTAAKDDSTFYRLKEKYFIYG-DVVLKAGYSVDSLLIY-----GMGGFGGAYVIDSSLEK 163
T +T + + + L A Y D++ + G S++
Sbjct: 86 YTYQPQTNTNTSITSSGELKAQSLGLSAIYDFDTVSGFTPYAGARVGINQIKSTVSTVTT 145
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA--SYRYIPHHIHSVNNSNAKSD 221
+ S+ + + + G Y +N +S+ A Y Y+ K D
Sbjct: 146 TAAAQSRTTHSQKQENKVGFGVLAGAQYAINPQLSVDAGVEYNYL-----------GKYD 194
Query: 222 VERVDRKGNAHI--ASLGINMHF 242
D K AH A +G+ +F
Sbjct: 195 KLDTDSKLKAHQYGAKVGLRHNF 217
>gi|149276320|ref|ZP_01882464.1| OmpA/MotB [Pedobacter sp. BAL39]
gi|149232840|gb|EDM38215.1| OmpA/MotB [Pedobacter sp. BAL39]
Length = 448
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 55/200 (27%), Gaps = 20/200 (10%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIEL----- 93
+D + + WS +GL+ L P + N Y G G +
Sbjct: 27 SSDTTKRFDKKSFRTWS---IGLNGGMLTHYTPFNNRSNGDFYTPTESWGYGAYVKKQIV 83
Query: 94 -GHNIQLEDF---VFGINC-HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-------VD 141
G IQ + V G+ + + + + +
Sbjct: 84 PGFGIQADFLAGKVRGMRANNYPGTQAQLDQTGFTTSIDWSAALSANFTIANLSLNQKKN 143
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
L Y G G + + + NA + V +G G ++ +++
Sbjct: 144 ILSPYATIGAGYMSSGATLRTEAGAPAIANATNQGFHENWFVPVGAGFKLGISNGVNIDL 203
Query: 202 SYRYIPHHIHSVNNSNAKSD 221
Y + + + ++
Sbjct: 204 GYNVNFVKGKNFDGVSGAAN 223
>gi|304321784|ref|YP_003855427.1| excinuclease ABC subunit A [Parvularcula bermudensis HTCC2503]
gi|303300686|gb|ADM10285.1| excinuclease ABC subunit A [Parvularcula bermudensis HTCC2503]
Length = 279
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 34/124 (27%), Gaps = 17/124 (13%)
Query: 128 IYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
V + S + Y G V + +E ++ N +
Sbjct: 164 WPIVVEARFHPSFVDWIDPYVGAGVTFLRVRATDPGPLEEVSANNT--------IGFGVS 215
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD--------RKGNAHIASLGI 238
G + + L ++Y + +R D + + + + G+
Sbjct: 216 AGFEIPIARKFGLFGDFKYYDLDTDGTFTAITADLGDRGDLVVDGTGVVRFDPTVFTFGL 275
Query: 239 NMHF 242
+ HF
Sbjct: 276 SYHF 279
>gi|148974894|ref|ZP_01811874.1| hypothetical protein VSWAT3_25254 [Vibrionales bacterium SWAT-3]
gi|145965403|gb|EDK30652.1| hypothetical protein VSWAT3_25254 [Vibrionales bacterium SWAT-3]
Length = 182
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 7/160 (4%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
D + NS G +G N L D F + + +T L +
Sbjct: 2 SDDGFQDYFDGAYNNSGSKQLYGGYVGGNYALNDTFFVGFDSSATTRSSTTLSDLSIQLG 61
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
Y + + +Y GG S + ++ + + ++
Sbjct: 62 WYQPIT-------PQVELYASGGVNWVRPQRRSSCRNDTILGPCDRETIKNYDEGLIGEA 114
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
G +N SL Y Y H H +NN S V+ +
Sbjct: 115 GAIVSINKRWSLQPFYSYSDTHKHGLNNFGVVSSVDVLSW 154
>gi|126641426|ref|YP_001084410.1| putative protein (DcaP-like) [Acinetobacter baumannii ATCC 17978]
Length = 443
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G ++ + + K + + +G+G Y + D L A Y ++
Sbjct: 268 VGRLNHKFANGSMLSGRSFVAEKRTNNDSEWAWGVGLGGKYQITPDTLLKADYYHVKGDG 327
Query: 211 HSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ SN+ ++ + SLGI F
Sbjct: 328 RFLLWSNSGYAIDDQNNMHSNEFDTVSLGITHQF 361
>gi|85707875|ref|ZP_01038941.1| hypothetical protein NAP1_01530 [Erythrobacter sp. NAP1]
gi|85689409|gb|EAQ29412.1| hypothetical protein NAP1_01530 [Erythrobacter sp. NAP1]
Length = 262
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 28/220 (12%), Positives = 59/220 (26%), Gaps = 17/220 (7%)
Query: 32 RKIDLFNEADNNVEYQDDEYGIW-----SGNYVGLHISRLYETHPLADTINRKTYNSLLP 86
D+ + W +G + + +E + + +
Sbjct: 49 EFEAEVPATDDFGSIPNGTDLAWDTDFDTGYTISGQVGYAFENGFRLEAEAAYSEYDVSG 108
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY-GDVVLKAGYSVDS--- 142
+ + G NI D + A + + + Y + +
Sbjct: 109 HSELLVGGANIDGVDSAVLTRGDASGANPTVGEVLADGQGDVSNFGLFANVYYDIQTGSG 168
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
Y G G +V V+ S A G D G + L G Y V+ + L
Sbjct: 169 FKPYVGAGLGYQWVD------VDYRPSGVAVGEDDDSGFAYQLMAGAGYEVSPGVELFGQ 222
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + ++ + + + G+ + F
Sbjct: 223 YTFRDMTEDAEIPLTLLP--ATLEVESQQSLLTAGVRVKF 260
>gi|416606|sp|Q00595|ALKL_PSEOL RecName: Full=Outer membrane protein AlkL; Flags: Precursor
gi|5824149|emb|CAB54056.1| outer membrane protein [Pseudomonas putida]
Length = 230
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 44/246 (17%), Positives = 80/246 (32%), Gaps = 20/246 (8%)
Query: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
M+F+ Y + V ++ V + A + + N ++ +S YVG
Sbjct: 1 MSFSNYKVIAMPVLVANFVLGAATA---WANENYPAKSAGYNQGDWV--ASFNFSKVYVG 55
Query: 61 LHISRLY-ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
+ L L + ++ L + + NI ++ FV G+ + S
Sbjct: 56 EELGDLNVGGGALPNADVSIGNDTTLTFDIAYFVSSNIAVDFFV-GVPARAKFQGEKSIS 114
Query: 120 YRLKEKYFIYGDVVLKAGY---SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ YG +L Y S + L Y G G D + + S +
Sbjct: 115 SLGRVSEVDYGPAILSLQYHYDSFERLYPYVGVGVGRVLFFDKTDGALSSFDI------- 167
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ +GL Y + L++ RYIP +++ I SL
Sbjct: 168 -KDKWAPAFQVGLRYDLGNSWMLNSDVRYIPFKTDVTGTLGPVPVSTKIEVDP--FILSL 224
Query: 237 GINMHF 242
G + F
Sbjct: 225 GASYVF 230
>gi|114564063|ref|YP_751577.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114335356|gb|ABI72738.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 376
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 53/180 (29%), Gaps = 10/180 (5%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+ YVG + + P + G+ ++V GI
Sbjct: 30 TPWYVGGGLGVNNYEPSCDQKTMKVCGED-DPYAWDVFGGY--LFNEYV-GIELGYR--- 82
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D + DV + G S+ + Y + + + S+ +
Sbjct: 83 -DLGRAEWTDYSNKRNDVGAR-GMSLGFVGFYPLADKWSLSAEAGAFNYLISNKKEYNTE 140
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ G + LG G+ Y ++ L A Y RY N + +S+ ++
Sbjct: 141 YYSDSGIAPYLGAGIGYNFTDNLKLQAKYRRYENLDEEKWNTLSMESNYWGLELSYRFGT 200
>gi|222086963|ref|YP_002545497.1| heat resistant agglutinin 1 protein [Agrobacterium radiobacter K84]
gi|221724411|gb|ACM27567.1| heat resistant agglutinin 1 protein [Agrobacterium radiobacter K84]
Length = 276
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 60/244 (24%), Gaps = 49/244 (20%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRL------------YETHPLADTINRKTYNSLLPNGLG 90
++ + G YV Y+ + R + + G
Sbjct: 29 EIKMPEVSVKDAQGWYVRGDFGYAINASHGDTSFRTYDPADGDYSSGRFDSDRFSDDFSG 88
Query: 91 IELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEKYFIYG----DVVLKAGYSVDSLL- 144
LG Q D F + + + G ++ + SL+
Sbjct: 89 G-LGVGYQFNDLFRADLTGDYFSGDYEGRTSSASPCSGSAGGTGCSTKARSSFKAGSLMV 147
Query: 145 -------------IYGMGGFGGAYVIDSSLEKVES-----------DNSKNAKGRFDGHG 180
Y G G + SS+ V S +
Sbjct: 148 NGYVDLGTLAGFTPYVGAGLGATRISWSSVNAVGSCVDGSSSCGGSSSVSTRYPGDSDWR 207
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIP------HHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ L G+ Y V ++ L YR+ + +++ D + H
Sbjct: 208 FTYALMAGVAYEVAPNVKLDLGYRFSHVAGGDMFGYSAADSAAGAGGTMGRDGALSRHEI 267
Query: 235 SLGI 238
+G+
Sbjct: 268 RVGL 271
>gi|317492223|ref|ZP_07950652.1| OmpW family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919562|gb|EFV40892.1| OmpW family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 213
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 3/107 (2%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + D L Y G D+ + + +GLDYMV+
Sbjct: 110 FGKAEDKLRPYVGVGINYTNFYDAKFNNTGKSLGLHDLSVDNSW--GAAGQVGLDYMVDK 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++AS Y+ ++ ++ + + +D + + + F
Sbjct: 168 DWMINASLWYMDIDT-TIKFRDSNNQKQNIDTHVDPFVFMFAVGYRF 213
>gi|239503657|ref|ZP_04662967.1| putative protein (DcaP-like) [Acinetobacter baumannii AB900]
gi|193077049|gb|ABO11808.2| putative protein (DcaP-like) [Acinetobacter baumannii ATCC 17978]
Length = 428
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G ++ + + K + + +G+G Y + D L A Y ++
Sbjct: 253 VGRLNHKFANGSMLSGRSFVAEKRTNNDSEWAWGVGLGGKYQITPDTLLKADYYHVKGDG 312
Query: 211 HSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ SN+ ++ + SLGI F
Sbjct: 313 RFLLWSNSGYAIDDQNNMHSNEFDTVSLGITHQF 346
>gi|184157735|ref|YP_001846074.1| putative DcaP-like protein [Acinetobacter baumannii ACICU]
gi|183209329|gb|ACC56727.1| putative DcaP-like protein [Acinetobacter baumannii ACICU]
gi|322508042|gb|ADX03496.1| putative DcaP-like protein [Acinetobacter baumannii 1656-2]
gi|323517628|gb|ADX92009.1| putative protein (DcaP-like) [Acinetobacter baumannii TCDC-AB0715]
Length = 428
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G ++ + + K + + +G+G Y + D L A Y ++
Sbjct: 253 VGRLNHKFANGSMLSGRSFVAEKRTNNDSEWAWGVGLGGKYQITPDTLLKADYYHVKGDG 312
Query: 211 HSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ SN+ ++ + SLGI F
Sbjct: 313 RFLLWSNSGYAIDDQNNMHSNEFDTVSLGITHQF 346
>gi|87199324|ref|YP_496581.1| hypothetical protein Saro_1303 [Novosphingobium aromaticivorans DSM
12444]
gi|87135005|gb|ABD25747.1| hypothetical protein Saro_1303 [Novosphingobium aromaticivorans DSM
12444]
Length = 185
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 46/156 (29%), Gaps = 18/156 (11%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF-GINCHTTAA 113
+G YVG+ + TH + + G + G+N L V+ G+ + A
Sbjct: 24 AGAYVGVGV-----THDNLASSGDDEGVGINGVGGTVFAGYNFDLTSSVYAGVEANFDLA 78
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ G+ DS +YG G+
Sbjct: 79 TAKIGDDTDSLEADYAFGGSALLGFRPSDSTALYGRVGYQ-----------RGRGTLTVD 127
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
+ + LG+GL + + + Y + +
Sbjct: 128 GTEYSDSADGLRLGLGLQADLTEKLGVRVEYNHTHY 163
>gi|260553752|ref|ZP_05826023.1| DcaP protein [Acinetobacter sp. RUH2624]
gi|260405152|gb|EEW98651.1| DcaP protein [Acinetobacter sp. RUH2624]
Length = 438
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 44/140 (31%), Gaps = 18/140 (12%)
Query: 121 RLKEKYFIYGDVVLKAGYSVDS--LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
R K D+ + Y+ L G + ++L + +
Sbjct: 220 RYDWKIDANNDLKVALEYTGSRVSALPSLTGRYTFKQGPLTALAQGFINEKSADVATATV 279
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYI-----------PHHIHSVNNSNAKSDVERVDR 227
S G GL Y + SL A+Y+YI + + + NA D +
Sbjct: 280 KKVSWGAGGGLKYQLTPQQSLQANYQYIVGDQKFMPYTTQSGLANSTSLNAAGDFSLNED 339
Query: 228 KGN-----AHIASLGINMHF 242
K + + ++G + F
Sbjct: 340 KTDLVMNKLNSVNIGYSYKF 359
>gi|220915683|ref|YP_002490987.1| OmpW family protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953537|gb|ACL63921.1| OmpW family protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 208
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 15/129 (11%), Positives = 40/129 (31%), Gaps = 10/129 (7%)
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ ++ + + ++ + + Y G V D+SL +
Sbjct: 90 DVKLSGTKIGTFSHLPPTLTVQGHLPLGRVKPYLGAGVNLTLVTDTSLSVPGVGKLELED 149
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
F + GLD V ++A +Y+ ++ + + + + + +
Sbjct: 150 YSF-----GLAAQAGLDVRVTGRWYVNADVKYV-----TIRSDVKAGGTKVSEVRVDPWL 199
Query: 234 ASLGINMHF 242
G+ F
Sbjct: 200 IGGGVGYRF 208
>gi|56478735|ref|YP_160324.1| outer membrane protein OmpW [Aromatoleum aromaticum EbN1]
gi|56314778|emb|CAI09423.1| Outer membrane protein OmpW [Aromatoleum aromaticum EbN1]
Length = 225
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 32/101 (31%), Gaps = 3/101 (2%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G + L + R + L GLDYM+ + L+A
Sbjct: 128 KWQPYVGAGINYTTFFNEELTSARKAQGFSHLDRESSW--GLALQAGLDYMLTDKVILNA 185
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ I + A V +VD + + +G+ F
Sbjct: 186 AVWRIGIDGEATARHPALGKV-KVDIDIDPWVYMVGVGYRF 225
>gi|194334715|ref|YP_002016575.1| porin opacity type [Prosthecochloris aestuarii DSM 271]
gi|194312533|gb|ACF46928.1| porin opacity type [Prosthecochloris aestuarii DSM 271]
Length = 206
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 16/100 (16%)
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+ Y M G G V +++ G + LG G+ ++ +
Sbjct: 123 ITPYVMAGLGVGIVDLEVEGELD--------GADSETVFAWQLGAGVGIQATENVVVDLG 174
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YRY +D + VD +H G+ F
Sbjct: 175 YRYFATGD--------IADEDDVDVSLGSHNLMAGVRFGF 206
>gi|169796330|ref|YP_001714123.1| hypothetical protein ABAYE2284 [Acinetobacter baumannii AYE]
gi|215483791|ref|YP_002326016.1| hypothetical protein ABBFA_002114 [Acinetobacter baumannii
AB307-0294]
gi|301510609|ref|ZP_07235846.1| hypothetical protein AbauAB05_03499 [Acinetobacter baumannii AB058]
gi|301595035|ref|ZP_07240043.1| hypothetical protein AbauAB059_04476 [Acinetobacter baumannii
AB059]
gi|169149257|emb|CAM87140.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii AYE]
gi|213986788|gb|ACJ57087.1| hypothetical protein ABBFA_002114 [Acinetobacter baumannii
AB307-0294]
Length = 428
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G ++ + + K + + +G+G Y + D L A Y ++
Sbjct: 253 VGRLNHKFANGSMLSGRSFVAEKRTNNDSEWAWGVGLGGKYQITPDTLLKADYYHVKGDG 312
Query: 211 HSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ SN+ ++ + SLGI F
Sbjct: 313 RFLLWSNSGYAIDDQNNMHSNEFDTVSLGITHQF 346
>gi|294010892|ref|YP_003544352.1| putative outer membrane protein [Sphingobium japonicum UT26S]
gi|292674222|dbj|BAI95740.1| putative outer membrane protein [Sphingobium japonicum UT26S]
Length = 171
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 18/140 (12%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAKDDSTFYRLKEK 125
+ T+ ++ G G++I + V FG + S ++
Sbjct: 26 FTGPRAGVTLGYDKFDGNDGFAYGASTGYDIAITPNVTFGPEVAFS-DSTTSLGAGVEVS 84
Query: 126 YFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
+ V + GY ++ +L +G G+ V S+ G V
Sbjct: 85 RDLSASV--RLGYILNPKVLAFGKVGYANTRVEASNSNSG-------------GSFEGVR 129
Query: 185 LGIGLDYMVNYDISLSASYR 204
G GL++ V + +SA Y+
Sbjct: 130 YGGGLEFAVTGNTYISAEYQ 149
>gi|260774241|ref|ZP_05883156.1| outer membrane protein W precursor [Vibrio metschnikovii CIP 69.14]
gi|260611202|gb|EEX36406.1| outer membrane protein W precursor [Vibrio metschnikovii CIP 69.14]
Length = 214
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D + D + +G+DYM++
Sbjct: 112 FGEAGSTWRPYVGAGVNYTNFFDEKFNDTGKTAGLSDLKLDDSW--GLAANVGVDYMLDD 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +AS Y + + D + D K N + + F
Sbjct: 170 NWFFNASVWYANIETTAKYKAG--VDAQSTDVKINPWVFMISGGYKF 214
>gi|193213615|ref|YP_001999568.1| porin opacity type [Chlorobaculum parvum NCIB 8327]
gi|193087092|gb|ACF12368.1| porin opacity type [Chlorobaculum parvum NCIB 8327]
Length = 229
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 33/243 (13%), Positives = 56/243 (23%), Gaps = 38/243 (15%)
Query: 13 VFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDE----YGIWSGNYVGLHISRL-- 66
V L + A P + G Y+ +
Sbjct: 12 VLLLAGASGTAFANGTSAPEPAPIRYTPPPPPPPAPAPAPVVDTCEPGPYISISAGIGIP 71
Query: 67 ----YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
+ NGL + D D
Sbjct: 72 EDIKAPVISQPTNGYPTDGKIDMENGLALNGAIGYDFGDARL--EAAVGYQSHDIADSED 129
Query: 123 KEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ V+ A Y ++ + Y M G G A+V
Sbjct: 130 DIDISLL-TVMANAYYDINTGSDVSPYIMAGAGWAHVGM--------------PSDESDD 174
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ +G GL V+ +L YRY+ + + ++ K H LG+
Sbjct: 175 VFAWQVGAGLGVKVSECTTLDLGYRYLKPNKFGPDGNDV--------YKWAVHNVMLGLR 226
Query: 240 MHF 242
+F
Sbjct: 227 FNF 229
>gi|607897|gb|AAA87401.1| opacity-related protein [Neisseria sicca]
gi|1095252|prf||2108298A opacity protein
Length = 253
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 54/233 (23%), Gaps = 59/233 (25%)
Query: 56 GNYVGLHISRLYETHPLADTIN----RKTYNSLLPNGLGIELGHNIQLEDFVFGIN-CHT 110
G YV +S YE + + + L ++ ++
Sbjct: 34 GPYVQADLSYAYEHITHDYPADNAKVFDDSRDVKTHSTHPRLSVGYDFGNWRIALDYARY 93
Query: 111 TAAKDDSTFYRLKEKY-----------------FIYGDVVLKAGYSVD----------SL 143
K + + + K G ++GYS
Sbjct: 94 NTWKHGKSIHGEETKTVTPSSGRPIEVKVIADHTDKGTFKAESGYSASSAIYDFDTGTRF 153
Query: 144 LIYGMGGFGGAYVIDSSLEKVESD--------------NSKNAKGRFDGHGSSVVLGIGL 189
Y G + S + ++D N G+
Sbjct: 154 KPYAGVRVGLGKIRHSITVEDKADVKVISVNASLPGYPKVNNIHESRSIRRVGFGAVAGV 213
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +++L YRY + + H ASLG+ F
Sbjct: 214 GIDITPNLTLDTGYRYHYWGHLE-------------NTRFKTHEASLGVRYRF 253
>gi|54293676|ref|YP_126091.1| hypothetical protein lpl0729 [Legionella pneumophila str. Lens]
gi|53753508|emb|CAH14963.1| hypothetical protein lpl0729 [Legionella pneumophila str. Lens]
Length = 261
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 48/201 (23%), Gaps = 35/201 (17%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNG---------LGIELGHNIQLED-FVFG 105
G Y GL +I R + + +G+ + G
Sbjct: 34 GFYAGLGTGFTTVLSTDEYSIVRPGFGIIRTGTHKVTNSAVLFSGHVGYGVMFNQKTYLG 93
Query: 106 INC-----------HTTAAKDDSTFYRLKEKYFIYGDVV------LKAGYSV-DSLLIYG 147
+ A + GY + L +
Sbjct: 94 GKGSIYYTPMENNNQISFASSRGPNELASGHDNFVRSLKPIYNIDAVLGYEFFPNFLPFV 153
Query: 148 MGGFGGAYVIDS-------SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
G A V + + ++ D + + +GIG +Y V+ + S
Sbjct: 154 EAGVSFANVKHRFVLEGAITNLVTGTVSNYTGGATSDNYNTGYNIGIGANYQVHKNWIFS 213
Query: 201 ASYRYIPHHIHSVNNSNAKSD 221
Y +++ N D
Sbjct: 214 GELVYHDLGTNNLTIPNFTPD 234
>gi|289165329|ref|YP_003455467.1| hypothetical protein LLO_1998 [Legionella longbeachae NSW150]
gi|288858502|emb|CBJ12383.1| hypothetical protein LLO_1998 [Legionella longbeachae NSW150]
Length = 221
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 4/100 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF---DGHGSSVVLGIGLDYMVNYDISLSA 201
Y G G + + +++ + F S G+GLD V + + A
Sbjct: 120 PYISAGIGASRNRGYNYQEIPVEPYAVPDPSFANRTQTNFSYSAGVGLDIEVTKNWRIGA 179
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKG-NAHIASLGINM 240
Y Y + S + ++V N + ++
Sbjct: 180 GYEYSNLGPTKLGRSPVQMTSQQVSSGTINTNQVLAQVSY 219
>gi|253688387|ref|YP_003017577.1| OmpW family protein [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251754965|gb|ACT13041.1| OmpW family protein [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 210
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 6/108 (5%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + D L Y G D + + + V GLDY ++
Sbjct: 108 FGDAQDKLRPYLGVGLNYTMFFDEKFNDKGTGAGLSDLSLKNSW--GVAAQAGLDYNLDK 165
Query: 196 DISLSASYRYIPHHIH-SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ S ++ NA+ + K + G+ F
Sbjct: 166 NWLVNMSVWWMDIDTDVKFKAGNAQQSIHT---KLDPWAFMFGVGYRF 210
>gi|15966485|ref|NP_386838.1| putative heat resistant agglutinin 1 signal peptide protein
[Sinorhizobium meliloti 1021]
gi|307300478|ref|ZP_07580258.1| putative heat resistant agglutinin 1 signal peptide protein
[Sinorhizobium meliloti BL225C]
gi|307318343|ref|ZP_07597778.1| putative heat resistant agglutinin 1 signal peptide protein
[Sinorhizobium meliloti AK83]
gi|15075756|emb|CAC47311.1| Putative heat resistant agglutinin 1 signal peptide protein
[Sinorhizobium meliloti 1021]
gi|306896025|gb|EFN26776.1| putative heat resistant agglutinin 1 signal peptide protein
[Sinorhizobium meliloti AK83]
gi|306904644|gb|EFN35228.1| putative heat resistant agglutinin 1 signal peptide protein
[Sinorhizobium meliloti BL225C]
Length = 257
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 32/263 (12%), Positives = 62/263 (23%), Gaps = 50/263 (19%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++ P + A D +L + + + + G Y+ I D
Sbjct: 5 AGLLAPFSAQAAD------EELLDAPEITISPEATGGGR---LYLRGDIGYA-AWLDEGD 54
Query: 75 TINRKTYNSLLPNG--------LGIELGHNIQLEDFVFG------INCHTTAAKD----- 115
R + + +G Q D + +
Sbjct: 55 PFYRSFGGTGEVSFDNARFDKPPSATIGLGYQFTDVIRADLTAEYFEGRFDGSSLSASPC 114
Query: 116 --DSTFYRLKEKYFIYGDVVLKA--GY----SVDSLLIYGMGGFGGAYVIDSSL------ 161
+ R + + GY ++ Y G G + +
Sbjct: 115 AGEGAGTRCALSHSANFSALGLMANGYLDLATLAGFTPYLGAGIGATRIDWKTTHETSTC 174
Query: 162 ----EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ G D + L G+ Y V + A YRY + S
Sbjct: 175 VGAGGACSGAAGGASYGGRDSWRFTYALMAGVSYDVTDRLKFDAGYRYSQIADGDMFGSG 234
Query: 218 AKSDVERVDRKGNAHIASLGINM 240
+ D + H +G+
Sbjct: 235 G---AKGHDDGLSRHEFRVGLRF 254
>gi|300702832|ref|YP_003744433.1| outer membrane protein w (ompw) [Ralstonia solanacearum CFBP2957]
gi|299070494|emb|CBJ41789.1| putative outer membrane protein W precursor (ompW) [Ralstonia
solanacearum CFBP2957]
Length = 224
Score = 40.9 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 24/101 (23%), Gaps = 10/101 (9%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G + V+ + L G DY + +
Sbjct: 134 RFKPYLGAGLNYTRI-----SGVDLQVPGVGPLDLSRNSFGPALQAGFDYRLTDHV---- 184
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + ++ + + + + +G+ F
Sbjct: 185 -YLNVDIKKTWISADVKLAGQTISKVRVDPWLVGVGLGYRF 224
>gi|7443354|pir||S16616 opacity protein opaD precursor - Neisseria gonorrhoeae (strain
MS11) (fragments)
Length = 266
Score = 40.9 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 15/71 (21%)
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G V G+G+D + +++L A YRY + +
Sbjct: 211 ESRSISSLGFGAVAGVGID--ITPNLTLDAGYRYHNWGRLE-------------NTRFKT 255
Query: 232 HIASLGINMHF 242
H ASLG+ F
Sbjct: 256 HEASLGVRYRF 266
>gi|213156934|ref|YP_002318979.1| hypothetical protein AB57_1605 [Acinetobacter baumannii AB0057]
gi|301347077|ref|ZP_07227818.1| hypothetical protein AbauAB0_12538 [Acinetobacter baumannii AB056]
gi|213056094|gb|ACJ40996.1| hypothetical protein AB57_1605 [Acinetobacter baumannii AB0057]
Length = 427
Score = 40.9 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G ++ + + K + + +G+G Y + D L A Y ++
Sbjct: 252 VGRLNHKFANGSMLSGRSFVAEKRTNNDSEWAWGVGLGGKYQITPDTLLKADYYHVKGDG 311
Query: 211 HSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ SN+ ++ + SLGI F
Sbjct: 312 RFLLWSNSGYAIDDQNNMHSNEFDTVSLGITHQF 345
>gi|117618219|ref|YP_855821.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559626|gb|ABK36574.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 333
Score = 40.9 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 47/171 (27%), Gaps = 23/171 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G+ Y D + L + G+N FG A
Sbjct: 28 WYTGIGAGWAYGH----DLNDFGKDADKDATALSLFGGYNFNDN---FGAELGYLYAGKG 80
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + + D ++ GG +V +
Sbjct: 81 GVDGVDFKTQGATLSGLARLPLG-DIFSVFAEGGAYFNHVNGNGS--------------- 124
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+G++ + G+G+ ++ I L A YRY+ + V ++
Sbjct: 125 SDNGTAPLAGLGVTAKLSDLIDLQARYRYMWNLGDEQKTWETNMSVATLEL 175
>gi|120553371|ref|YP_957722.1| OmpW family protein [Marinobacter aquaeolei VT8]
gi|120323220|gb|ABM17535.1| OmpW family protein [Marinobacter aquaeolei VT8]
Length = 246
Score = 40.9 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 36/101 (35%), Gaps = 10/101 (9%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+ Y G G +D + + ++ + + G + ++ + S +
Sbjct: 156 NFSPYFGAGVGRILFLDEKDRALTDFDVEDT--------WAPAIQAGFRWRIHNNWSANF 207
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
RY P + + + V+ + + + I S+G+ F
Sbjct: 208 DVRYAPF-KADITGNLGPAPVQ-AEVEVDPTIVSIGVAYRF 246
>gi|88703579|ref|ZP_01101295.1| OmpW family protein [Congregibacter litoralis KT71]
gi|88702293|gb|EAQ99396.1| OmpW family protein [Congregibacter litoralis KT71]
Length = 245
Score = 40.9 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 8/108 (7%)
Query: 143 LLIYGMGGFGGAYV----IDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVNYDI 197
Y G +D+ L V D + + G+D +N
Sbjct: 138 WQPYLGLGVNYTTFFSEKVDNELGAVLGDLLDVTSAKLSLDDSVGLAAQAGVDIPLNDKW 197
Query: 198 SLSASYRYIPHHIHS---VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+L+ YI + V + + D + + ++G+ F
Sbjct: 198 ALNLGVWYIDIGTTADIDVTTGSGANATVSFDVDIDPWVYNVGVAYKF 245
>gi|319945444|ref|ZP_08019704.1| surface protein A [Lautropia mirabilis ATCC 51599]
gi|319741230|gb|EFV93657.1| surface protein A [Lautropia mirabilis ATCC 51599]
Length = 208
Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 56/202 (27%), Gaps = 38/202 (18%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYN-------SLLPNGLGIELGHNIQLEDFVFGINC 108
G Y+ I + + + + +G+ + V G
Sbjct: 29 GAYIQGDIGLGHLKVDDNEKLRVSNVGRKIKDSYHESGFMPRLSVGYALGNGLRVAGDFT 88
Query: 109 HT-----TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSS 160
H + + K +G + Y D + Y + S+
Sbjct: 89 HYKEMKESYDAANGATQNAGVKANGFGVSAI---YDFDYGSDFVPYVGARLAANKLKYSA 145
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+K + L +G Y ++ +++L A YRY
Sbjct: 146 GYAAAGQRFSTSKS---KTKAGYGLLLGFGYKLSNEMTLDAGYRY--------------- 187
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+D NAH S+G+ +F
Sbjct: 188 --NHMDSDLNAHEVSVGLRYYF 207
>gi|304386896|ref|ZP_07369158.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|304339055|gb|EFM05147.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
Length = 225
Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 28/125 (22%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV--------------- 184
D Y +V + +K V
Sbjct: 114 FDKFKPYIGARVAYGHVKHQVHSVESKNTIVTSKPTQGAAQGGPVPTGFVPKSAYHESHS 173
Query: 185 -------LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ G+ + + ++L YRY + + H SLG
Sbjct: 174 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 220
Query: 238 INMHF 242
+ HF
Sbjct: 221 VRYHF 225
>gi|218887340|ref|YP_002436661.1| aromatic hydrocarbon degradation membrane protein [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218758294|gb|ACL09193.1| membrane protein involved in aromatic hydrocarbon degradation
[Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 407
Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 52/182 (28%), Gaps = 24/182 (13%)
Query: 85 LPNGLGIELGHNIQLEDFVFG-----------INCHTTAAKDDSTFYRLKEKYFIYGDVV 133
G G+ G + D V + T K+ + + G V
Sbjct: 188 DATGFGLNGGAWWKATDSVALGASFRTPIKQKLEGRATFDKNGAVLPGMFNDTDAEGSVT 247
Query: 134 ----LKAGYSVDS-----LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
++ G + + + + F +Y + +
Sbjct: 248 LPGEVRVGVAWEPDNRWSVAVDVTRTFWSSYDELRIGYGHPLASGVTESLKTTEWRDVWR 307
Query: 185 LGIGLDYMVNYDISLSASYRY--IPHHIHSVNNSNAKSDVERVDRKGNAHIA--SLGINM 240
LG+G++Y + + L A Y Y P + ++ +D + H + ++
Sbjct: 308 LGLGVEYRLTDMVDLRAGYVYDCEPVNSDHLDFLVPANDRQLYSVGVGLHDGPWRVDVSY 367
Query: 241 HF 242
+
Sbjct: 368 TY 369
>gi|87303417|ref|ZP_01086205.1| hypothetical protein WH5701_10330 [Synechococcus sp. WH 5701]
gi|87282065|gb|EAQ74027.1| hypothetical protein WH5701_10330 [Synechococcus sp. WH 5701]
Length = 309
Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 66/248 (26%), Gaps = 29/248 (11%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNE--ADNNVEYQDDEYGIWSGNYVGLHISRLY----- 67
+++ P+ + + A + + Y +G Y+GL + +
Sbjct: 32 AALLAPDGAAIALSPSAEPDANTDATVAQSYGSSEPVPYEQGTGWYLGLGLGAAWPTDTG 91
Query: 68 --ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK 125
+ + G +L ++ T A + +
Sbjct: 92 VRTRNLTERGFENVNGDLSFGGGFSGDLAVGYDFGAIRTELSYVYTRASVNDVSFSANGN 151
Query: 126 YFIYGDVVLK-------AGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ + +GY + Y GG G + + KV S + + G
Sbjct: 152 KYNLSSSGVINKNDIFASGYWDISTGSRWTPYIGGGIGYTNLS-TPRIKVSSGGNSVSTG 210
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ +G+ Y V+ + Y S +N S N A
Sbjct: 211 TTNQGLFGWQAKLGVSYGVSNASDVYLEGTYSGASGFSGDNIRYDS--------YNDFGA 262
Query: 235 SLGINMHF 242
+G F
Sbjct: 263 KVGFRYRF 270
>gi|146308887|ref|YP_001189352.1| OmpW family protein [Pseudomonas mendocina ymp]
gi|145577088|gb|ABP86620.1| OmpW family protein [Pseudomonas mendocina ymp]
Length = 227
Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 29/98 (29%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G + D+ L D + +G+DYM+ + L+A R
Sbjct: 134 PYVGIGINYTWFFDTELSSEAEGKGFRGLDMKDSW--GLAGQVGMDYMLTDKLMLNAQVR 191
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YI VD + +G+ F
Sbjct: 192 YIDIDTTGTTYLAGDKVKVDVDVDP--FVYMVGLGYKF 227
>gi|28900103|ref|NP_799758.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus RIMD
2210633]
gi|260365754|ref|ZP_05778250.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
gi|260880676|ref|ZP_05893031.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|260897717|ref|ZP_05906213.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|260899371|ref|ZP_05907766.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|28808386|dbj|BAC61591.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus RIMD
2210633]
gi|308086262|gb|EFO35957.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|308092198|gb|EFO41893.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|308109307|gb|EFO46847.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|308114934|gb|EFO52474.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
Length = 325
Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 44/191 (23%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV---FGIN--CHTTA 112
Y+G + + L D G+ +G+N ++V +G++ TA
Sbjct: 26 YIGGKVGY----NSLNDACYLNEPCDDDSFAAGMHIGYN--FNEYVAAEYGVDYLGDFTA 79
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + K + DS ++ G D
Sbjct: 80 NFKKPGLNTVDGDL-WALTLAPKFNLPLTDSWNLFAKVGAAYMMAGDEKDFVPTGS---- 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+G +Y +NY+ SL A Y+ + +
Sbjct: 135 ---------------LGAEYKINYNWSLRAEYQRYQDMSDDIVDDMDSDFFG-------- 171
Query: 232 HIASLGINMHF 242
+G N F
Sbjct: 172 ----IGFNYKF 178
>gi|160888964|ref|ZP_02069967.1| hypothetical protein BACUNI_01384 [Bacteroides uniformis ATCC 8492]
gi|317479255|ref|ZP_07938390.1| outer membrane insertion protein [Bacteroides sp. 4_1_36]
gi|156861431|gb|EDO54862.1| hypothetical protein BACUNI_01384 [Bacteroides uniformis ATCC 8492]
gi|316904543|gb|EFV26362.1| outer membrane insertion protein [Bacteroides sp. 4_1_36]
Length = 552
Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 37/137 (27%), Gaps = 6/137 (4%)
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
T + K GY+V + L G + + E D
Sbjct: 366 TYSALGGRDMDRDFKLQTPWVFNASLGYTVGNNLALG-AEYEYEDYSSMKFKYPEGDEMA 424
Query: 171 NAKGRFDGHGSSV-VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G D V L +G +Y SL A Y Y S+ D
Sbjct: 425 WETGEADLCMKGVSTLRLGAEYKPIPAFSLRAGYNYSTAAYKKDAIKALPSNSINTDTDF 484
Query: 230 ----NAHIASLGINMHF 242
+ + +LGI F
Sbjct: 485 ANSKSMNTFTLGIGYRF 501
>gi|28199678|ref|NP_779992.1| outer membrane protein [Xylella fastidiosa Temecula1]
gi|182682423|ref|YP_001830583.1| OmpW family protein [Xylella fastidiosa M23]
gi|28057799|gb|AAO29641.1| outer membrane protein [Xylella fastidiosa Temecula1]
gi|182632533|gb|ACB93309.1| OmpW family protein [Xylella fastidiosa M23]
gi|307578706|gb|ADN62675.1| outer membrane protein [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 218
Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 39/130 (30%), Gaps = 8/130 (6%)
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ +K + G + + + G+ A ++L + N N
Sbjct: 97 TDASGKIGNVTQKTPLALSAQYHFGQAQNVFRPFVGVGYSQAKSRFTALGSTDRVNLGNF 156
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+G IGLD V+ + RY + + + S +R+ +
Sbjct: 157 RGAIGT--------IGLDMNVDSNWFARLDARYTRFSNSNSKAALSSSLGLDQNRRLDPW 208
Query: 233 IASLGINMHF 242
GI F
Sbjct: 209 SVGFGIGARF 218
>gi|71901285|ref|ZP_00683383.1| OmpW [Xylella fastidiosa Ann-1]
gi|71728938|gb|EAO31071.1| OmpW [Xylella fastidiosa Ann-1]
Length = 218
Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 39/130 (30%), Gaps = 8/130 (6%)
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ +K + G + + + G+ A ++L + N N
Sbjct: 97 TDASGKIGNVTQKTPLALSAQYHFGQAQNVFRPFVGVGYSQAKSRFTALGSTDRVNLGNF 156
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+G IGLD V+ + RY + + + S +R+ +
Sbjct: 157 RGAIGT--------IGLDMNVDSNWFARLDARYTRFSNSNSKAALSSSLGLDQNRRLDPW 208
Query: 233 IASLGINMHF 242
GI F
Sbjct: 209 SVGFGIGARF 218
>gi|240118332|ref|ZP_04732394.1| outer membrane protein [Neisseria gonorrhoeae PID1]
gi|268604045|ref|ZP_06138212.1| outer membrane protein [Neisseria gonorrhoeae PID1]
gi|268588176|gb|EEZ52852.1| outer membrane protein [Neisseria gonorrhoeae PID1]
Length = 207
Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++N + + G+ + + ++L A YRY
Sbjct: 135 NGAVTTYNTDPKTQNDYQSNSIRRVGLGVIAGVGFDITPKLTLDAGYRYHNWGRLE---- 190
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 191 ---------NTRFKTHEASLGVRYRF 207
>gi|323495403|ref|ZP_08100480.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
gi|323310326|gb|EGA63513.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
Length = 322
Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 22/187 (11%), Positives = 55/187 (29%), Gaps = 40/187 (21%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G + + + + +S+ G+ G+ + + + +
Sbjct: 23 FYLGGKVGKSWLDDACTALTSDCDDDSM---TAGVIAGYEF-FD--MLSLEAGYDYLGEF 76
Query: 117 STFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ EK + + K + + + +YG G +
Sbjct: 77 TADGLADEKVKAF-TIAPKLNLPLTEDISVYGKLGGARVEYGN----------------- 118
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+S + IG + + + ++ Y+ +DV K + A+
Sbjct: 119 --KDDNSYLGAIGFEIESDDNFAVRIEYQ-------------RLTDVNNDLVKAAVNSAT 163
Query: 236 LGINMHF 242
LG+ F
Sbjct: 164 LGLVYKF 170
>gi|289208268|ref|YP_003460334.1| OmpW family protein [Thioalkalivibrio sp. K90mix]
gi|288943899|gb|ADC71598.1| OmpW family protein [Thioalkalivibrio sp. K90mix]
Length = 216
Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 29/98 (29%), Gaps = 10/98 (10%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G + + +++ R D V L G+D ++ + L+ R
Sbjct: 129 PYLGAGVNYTHF----FDTTTRGALSDSRLRLDDS-WGVALQAGIDIALDDNWFLNTEVR 183
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+I + N VE + + F
Sbjct: 184 WIDIESTARLNGQRIGTVEVDPWTFGMN-----VGYRF 216
>gi|148266343|ref|YP_001233049.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146399843|gb|ABQ28476.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 454
Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 51/156 (32%), Gaps = 34/156 (21%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY--FIYGDVVLKAGYSVDSLLIY 146
+GI G+N +V G+ + + T L + GDV+L D L+ Y
Sbjct: 54 VGIRGGYN--FTKYV-GVEALFDYVRTEGTRAGLGDANVYRYGGDVLLHILPDSD-LVPY 109
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G+GG + + + G+GL Y + +++L +R++
Sbjct: 110 LAAGYGGLTLDRENQKTNNHGVFD--------------YGVGLKYFLTDNLALRGDFRHL 155
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N + + G+ F
Sbjct: 156 VFRDSGETLYNYE--------------YTAGVAYQF 177
>gi|270293910|ref|ZP_06200112.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270275377|gb|EFA21237.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 552
Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 37/137 (27%), Gaps = 6/137 (4%)
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
T + K GY+V + L G + + E D
Sbjct: 366 TYSALGGRDMDRDFKLQTPWVFNASLGYTVGNNLALG-AEYEYEDYSSMKFKYPEGDEMA 424
Query: 171 NAKGRFDGHGSSV-VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G D V L +G +Y SL A Y Y S+ D
Sbjct: 425 WETGEADLCMKGVSTLRLGAEYKPIPAFSLRAGYNYSTAAYKKDAIKALPSNSINTDTDF 484
Query: 230 ----NAHIASLGINMHF 242
+ + +LGI F
Sbjct: 485 ANSKSMNTFTLGIGYRF 501
>gi|3980172|emb|CAA33778.1| protein II [Neisseria gonorrhoeae]
Length = 272
Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 15/81 (18%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + G V G+G+D + +++L A YRY
Sbjct: 207 GAPTKKPAHHESRSISSLGFGAVAGVGID--ITPNLTLDAGYRYHNWGRLE--------- 255
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 256 ----NTRFKTHEASLGVRYRF 272
>gi|325142772|gb|EGC65144.1| opacity protein [Neisseria meningitidis 961-5945]
Length = 219
Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 28/118 (23%), Gaps = 29/118 (24%)
Query: 141 DSLLIYGMGGFGGAYVID---------SSLEKVESDNSKNAKG-------RFDGHGSSVV 184
D Y +V +++ +
Sbjct: 115 DKFKPYIGARIAYGHVKHQIHSVESKTTTVTSNNGGPIPQGPTPKPPYHESNSISSLGLG 174
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ G+ + + ++L YRY + + H SLG+ HF
Sbjct: 175 VIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGVRYHF 219
>gi|288927756|ref|ZP_06421603.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
F0108]
gi|288330590|gb|EFC69174.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
F0108]
Length = 165
Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 45/140 (32%), Gaps = 8/140 (5%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK 125
+ + A ++ + G+G+ ++I E F N + K+ F+ +
Sbjct: 15 AFASAQFAVGVHTLYGTEVSNLGIGVRARYDI-NEQFRLDGNFNYYFKKNGLEFWDINAN 73
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
++ D Y +GG G + + +
Sbjct: 74 LHYLFNIT-------DRFSAYPLGGLGLVTASSTIEVRDPFTGKVLSSTSESSTKLGFNF 126
Query: 186 GIGLDYMVNYDISLSASYRY 205
G G+D+ + D+ L+ +Y
Sbjct: 127 GGGVDFALTDDLYLNGEVKY 146
>gi|330894837|gb|AEC47883.1| Omp1 [Moritella viscosa]
Length = 193
Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 49/158 (31%), Gaps = 30/158 (18%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG Y+G T L D + T L G Q V I T
Sbjct: 26 SGFYLGG--GAGSTTVNLDDAFDEDTDGKTLKFITG------YQFNRIV-AIEAQYTKYG 76
Query: 115 DDSTFYRLKEKYFIY------GDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
+ + + +Y V GY+ + L +G+ G + S
Sbjct: 77 EITPDKNITRDRKLYTWDATTFSVSANLGYTFQNGLRPFGIIGLSSLDLGQS-------- 128
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASY 203
+K D + ++V LG GL+Y +S Y
Sbjct: 129 ----SKALKDDNATAVHLGAGLEYTPAALSGVSFRVGY 162
>gi|160896428|ref|YP_001562010.1| OmpW family protein [Delftia acidovorans SPH-1]
gi|160362012|gb|ABX33625.1| OmpW family protein [Delftia acidovorans SPH-1]
Length = 223
Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 9/112 (8%)
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKV----ESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ G + + Y G A N + IG
Sbjct: 117 RFGEANSAFRPYLGLGVTYAKFFGERTTASLNGLTGGTLANPTTASVDSKWGLTPQIGFV 176
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y N L +Y Y + + S+ +S V K N ++ ++GI F
Sbjct: 177 YSFNERWFLDVAY-YKSFLKTTAHLSSGQS----VSLKLNPNVYAIGIGYRF 223
>gi|161523483|ref|YP_001578495.1| OmpW family protein [Burkholderia multivorans ATCC 17616]
gi|189351744|ref|YP_001947372.1| outer membrane protein [Burkholderia multivorans ATCC 17616]
gi|221201619|ref|ZP_03574657.1| outer membrane protein, OmpW family [Burkholderia multivorans
CGD2M]
gi|221207306|ref|ZP_03580316.1| outer membrane protein, OmpW family [Burkholderia multivorans CGD2]
gi|160340912|gb|ABX13998.1| OmpW family protein [Burkholderia multivorans ATCC 17616]
gi|189335766|dbj|BAG44836.1| outer membrane protein [Burkholderia multivorans ATCC 17616]
gi|221172894|gb|EEE05331.1| outer membrane protein, OmpW family [Burkholderia multivorans CGD2]
gi|221178435|gb|EEE10844.1| outer membrane protein, OmpW family [Burkholderia multivorans
CGD2M]
Length = 243
Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 56/193 (29%), Gaps = 15/193 (7%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTF 119
P+ ++ + LG+ G+ + +FV G+ T + F
Sbjct: 51 YGVGGTPVNQSVPNTGAGINDADTLGLATGYFLTDHISTEFVLGVPPKFDITGKGQFANF 110
Query: 120 YRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGR 175
L Y ++L+ + + Y G + + E+
Sbjct: 111 GVLGRAYQWSPALLLRYHFNDANAKFRPYVGIGATYVWFTGAKITNTAFENGVLGGPTSA 170
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ + V G Y S Y+P + + + ++ V + AHI+
Sbjct: 171 TTSNQWAPVFNAGFTYNFTKHWFAGLSISYVPVSVTATFTTARRTQVGTLTETSKAHISL 230
Query: 236 ------LGINMHF 242
L + F
Sbjct: 231 NPIVTYLNVGYRF 243
>gi|86145132|ref|ZP_01063463.1| Outer membrane protein [Vibrio sp. MED222]
gi|218676699|ref|YP_002395518.1| hypothetical protein VS_II0938 [Vibrio splendidus LGP32]
gi|85836709|gb|EAQ54829.1| Outer membrane protein [Vibrio sp. MED222]
gi|218324967|emb|CAV26803.1| Hypothetical protein VS_II0938 [Vibrio splendidus LGP32]
Length = 211
Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 66/200 (33%), Gaps = 25/200 (12%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLP--NGLGIELGHNIQLEDFVFGINCHTTA 112
SG Y+G I + K + N I G+ + + + T
Sbjct: 25 SGLYLGGAIG-TSGVDDGGLFSSIKEPVTFEAEDNAYRIIAGYKF---NRIVSLELQYTD 80
Query: 113 AKDDSTFYRLKEKYFI-----YGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVES 166
D Y L+ + GY+ D+ + +G G + +
Sbjct: 81 YGDVVAKYPLRSNAGFTWTPQVFSIAANLGYTFDNGVRPFGTIGLSSIDLDMKY-----A 135
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNY----DISLSASYRYIPHHIHSVNNSNAKSDV 222
D S+ + FD G+ V +G G++Y ++SL Y V+ N+ +
Sbjct: 136 DGSRPSSSDFDDSGAGVRVGFGVEY--TPEKLSELSLRLGYE-ADAFTVEVDEGNSW-NR 191
Query: 223 ERVDRKGNAHIASLGINMHF 242
++V++ LG F
Sbjct: 192 KKVEKDIVLASFYLGAMYTF 211
>gi|313669055|ref|YP_004049339.1| Opa protein [Neisseria lactamica ST-640]
gi|313006517|emb|CBN87981.1| Opa protein [Neisseria lactamica 020-06]
Length = 210
Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 15/87 (17%)
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ + + + G V G+G+D + +++L YRY
Sbjct: 139 INNIVSGPINVHPPVHESHSIRRVGFGAVAGVGID--ITPNLTLDTGYRYHYWGRLE--- 193
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 194 ----------NTRFKTHEASLGVRYRF 210
>gi|329113786|ref|ZP_08242557.1| Putative outer-membrane protein Y4mB [Acetobacter pomorum DM001]
gi|326696796|gb|EGE48466.1| Putative outer-membrane protein Y4mB [Acetobacter pomorum DM001]
Length = 288
Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 8/141 (5%)
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-----DSLLIYGMGGFGGAYVIDSSL 161
+ S K + ++ Y G + + +
Sbjct: 151 EVAALGSDVPSLGGPRKLDVGSAWVLPPTVTFAWHFRPHKRFNPYVGVGATAMWFHNMNG 210
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + F G + +G DY + + +A + + +H+ + A+S
Sbjct: 211 NRGSALGLTKLNAGFTG---GPSVNVGFDYQIVGNWFFNADVKQMFVRMHAWVENPAESL 267
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + S GI F
Sbjct: 268 KVKAHESLDPTVVSAGIAYRF 288
>gi|221213444|ref|ZP_03586419.1| outer membrane protein, OmpW family [Burkholderia multivorans CGD1]
gi|221166896|gb|EED99367.1| outer membrane protein, OmpW family [Burkholderia multivorans CGD1]
Length = 243
Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 56/193 (29%), Gaps = 15/193 (7%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTF 119
P+ ++ + LG+ G+ + +FV G+ T + F
Sbjct: 51 YGVGGTPVNQSVPNTGAGINDADTLGLATGYFLTDHISTEFVLGVPPKFDITGKGQFANF 110
Query: 120 YRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGR 175
L Y ++L+ + + Y G + + E+
Sbjct: 111 GVLGRAYQWSPALLLRYHFNDANAKFRPYVGIGATYVWFTGAKITNTAFENGVLGGPTSA 170
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ + V G Y S Y+P + + + ++ V + AHI+
Sbjct: 171 TTSNQWAPVFNAGFTYNFTKHWFAGLSISYVPVSVTATFTTARRTQVGTLTETSKAHISL 230
Query: 236 ------LGINMHF 242
L + F
Sbjct: 231 NPIVTYLNVGYRF 243
>gi|254253471|ref|ZP_04946789.1| Outer membrane protein W [Burkholderia dolosa AUO158]
gi|124896080|gb|EAY69960.1| Outer membrane protein W [Burkholderia dolosa AUO158]
Length = 243
Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 55/193 (28%), Gaps = 15/193 (7%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTF 119
P+ ++ + LG+ G+ + + VFG+ + F
Sbjct: 51 YGVGGTPVNQSVPNTGAGISDADTLGLATGYFITDHISTELVFGVPPKFDINGKGQFARF 110
Query: 120 YRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGR 175
L Y V+L+ + + Y G + + E+
Sbjct: 111 GVLGRAYQWSPAVLLRYHFNDANAKFRPYVGIGASYVWFTGAKITNGAFENGVLGGPTSA 170
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ + V G Y S Y+P + + + ++ V + AHI+
Sbjct: 171 TTSNQWAPVFNAGFTYNFTKHWFAGLSISYVPVSVTATFTTARRTPVGTLTETSKAHISL 230
Query: 236 ------LGINMHF 242
L + F
Sbjct: 231 NPIVTYLNVGYRF 243
>gi|330894843|gb|AEC47886.1| Omp1 [Moritella viscosa]
Length = 193
Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 49/158 (31%), Gaps = 30/158 (18%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG Y+G T L D + T L G Q V I T
Sbjct: 26 SGFYLGG--GAGSTTVNLDDAFDEDTDGKTLKFITG------YQFNRIV-AIEAQYTKYG 76
Query: 115 DDSTFYRLKEKYFIY------GDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
+ + + +Y V GY+ + L +G+ G + S
Sbjct: 77 EITPDKNITRDGKLYTWDATTFSVSANLGYTFQNGLRPFGIIGLSSLDLGQS-------- 128
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASY 203
+K D + ++V LG GL+Y +S Y
Sbjct: 129 ----SKALKDDNATAVHLGAGLEYTPAALSGVSFRVGY 162
>gi|153831721|ref|ZP_01984388.1| outer membrane protein OmpA [Vibrio harveyi HY01]
gi|148872231|gb|EDL71048.1| outer membrane protein OmpA [Vibrio harveyi HY01]
Length = 321
Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 32/185 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + + L D + G+ +G+N + + +
Sbjct: 26 YIGGKLGY----NALNDACHLDAPCDDDSFAAGMHIGYNF---NEYVAAEYGVDYLGNFT 78
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ + GD+ + + + + + + D
Sbjct: 79 ANFNKAGLNTVDGDL-------------WALTLAPKFNLPLNDSWNLFAKVGAAYMMAGD 125
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+G +Y +NY+ SL A Y+ + + +G
Sbjct: 126 EKDFVPTGSLGAEYQINYNWSLRAEYQRYQDMSDDIIDDMDADFFG------------IG 173
Query: 238 INMHF 242
N F
Sbjct: 174 FNYKF 178
>gi|145589430|ref|YP_001156027.1| hypothetical protein Pnuc_1248 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047836|gb|ABP34463.1| hypothetical protein Pnuc_1248 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 231
Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 24/203 (11%), Positives = 45/203 (22%), Gaps = 17/203 (8%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG--------IELGHNIQLEDFVFGIN 107
G Y + + + + N L G G + G+ + D F I
Sbjct: 30 GFYGQIGVGYQITNITYSGVVPGAPSNISLAPGSGPSYGITGNVGAGYTYSIND-RFTIG 88
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSL--------LIYGMGGFGGAYVIDS 159
Y ++ + G G +
Sbjct: 89 AGAEYYPVVGPPGNYTLTSCTPSCSTGNGSYHTQNMYNLFVAPGVTLGEDGLAYLKAGYT 148
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
G + GIG ++ +I A Y Y+ + +
Sbjct: 149 RASVKTMVQGALPIGGTVSNPLGPSFGIGYKQYLSGNIYGFAEYNYLIYQKTTTQFQGTG 208
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ + LG+ F
Sbjct: 209 GLTLYNSNQSSVQNLVLGLGYKF 231
>gi|94987283|ref|YP_595216.1| putative invasin [Lawsonia intracellularis PHE/MN1-00]
gi|94731532|emb|CAJ54895.1| putative invasin [Lawsonia intracellularis PHE/MN1-00]
Length = 244
Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 18/181 (9%), Positives = 49/181 (27%), Gaps = 18/181 (9%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYN------------SLLPNGLGIELGHNI-QLED 101
+G Y+ + + T N + G + +G++ +
Sbjct: 25 TGLYIAPKFIWGFAPVDIKTTGTIGIVNVQTISDSVSHKKTESLPGGALAVGYDFNHMFQ 84
Query: 102 FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV---DSLLIY--GMGGFGGAYV 156
+ K + ++ G +++ + + Y G G
Sbjct: 85 TPIRTELEFSFFKKMDIKHNGQKTDITLGALLVNGYFDIKTDSPFTPYIGVGLGIAGVKT 144
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+++ + K + + +G Y ++ +L YR+ +
Sbjct: 145 KSNAIIDSLGYDIKVKLDDKTKKNFAWMATVGTSYEISETFALDLGYRFAGFGKGETKSW 204
Query: 217 N 217
N
Sbjct: 205 N 205
>gi|304322227|ref|YP_003855870.1| outer membrane protein OmpW [Parvularcula bermudensis HTCC2503]
gi|303301129|gb|ADM10728.1| outer membrane protein OmpW [Parvularcula bermudensis HTCC2503]
Length = 218
Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 3/98 (3%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G + +D + K D + L +G+D +N ++A +
Sbjct: 124 PYVGAGLNYTLFYNEDASDSLTDAVGDTKIELDDS-FGLALQVGVDMPINDTWMVNADVK 182
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YI + + V VD + + LG+ F
Sbjct: 183 YIQIDTTA--TLTTGALVNTVDVDLDPFVVGLGVGRTF 218
>gi|71275071|ref|ZP_00651358.1| OmpW [Xylella fastidiosa Dixon]
gi|170731044|ref|YP_001776477.1| outer membrane protein [Xylella fastidiosa M12]
gi|71163880|gb|EAO13595.1| OmpW [Xylella fastidiosa Dixon]
gi|167965837|gb|ACA12847.1| outer membrane protein [Xylella fastidiosa M12]
Length = 218
Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 39/130 (30%), Gaps = 8/130 (6%)
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ +K + G + + + G+ A ++L + + N
Sbjct: 97 TDASGKIGNVTQKTPLALSAQYHFGQAQNVFRPFVGLGYSQAKSRFTALGSTDRVSLGNF 156
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+G IGLD V+ + RY + + + S +R+ +
Sbjct: 157 RGAIGT--------IGLDMNVDSNWFARLDARYTRFSNSNSKAALSSSLGLDQNRRLDPW 208
Query: 233 IASLGINMHF 242
GI F
Sbjct: 209 SVGFGIGARF 218
>gi|14578680|gb|AAK68947.1| major outer membrane protein [Erwinia psidii]
Length = 148
Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 10/87 (11%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + N+ + G S + +G++Y + + + Y+++
Sbjct: 4 YTRLGGMVWRADSTQNNNGIRISDHDTGVSPLAAVGVEYALTKNWATRLDYQWV------ 57
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGIN 239
N D V + + + SLG++
Sbjct: 58 ----NNIGDANTVGTRPDNGMLSLGVS 80
>gi|75677152|ref|YP_319573.1| hypothetical protein Nwi_2971 [Nitrobacter winogradskyi Nb-255]
gi|74422022|gb|ABA06221.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 284
Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 32/262 (12%), Positives = 65/262 (24%), Gaps = 43/262 (16%)
Query: 21 NHSLAVDLYLPR-KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL------YETHPLA 73
+ A L+ A Y + G Y+ I
Sbjct: 8 VAAGAASLFSSAAFAADLPIAPPPPPYFVPPIVDFGGWYLRGDIGFSNQRVRNIAMADGR 67
Query: 74 DTINRKTYNSLLPNGLGIEL-GHNIQLEDFVFG-------INCHTTAAKD---------- 115
+ + + GI G Q +++ G N +
Sbjct: 68 NAQLLSHEQTTAFDAAGIYGVGVGYQFNNWLRGDITGQYRGNANFKGTDLLTYPVGGGVV 127
Query: 116 ---DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE------- 165
+ + K ++ + + + G + + G G A V ++ V
Sbjct: 128 GTGVNNYNAAKSEWLVLANAYVDLGTWWG-ITPFIGAGVGAARVTIANYTDVGMVNNIGF 186
Query: 166 ---SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ S + GL Y VN +++ Y Y+ + + +
Sbjct: 187 GWGTYPSAAVAPAASTWNFAWAAHAGLAYQVNPGLAIELGYSYVNLGSGTTGPVSTYTGF 246
Query: 223 ERVD----RKGNAHIASLGINM 240
R +H LG+
Sbjct: 247 TRGVPMQFNDITSHDLRLGVRW 268
>gi|190689252|dbj|BAG49329.1| outer membrane protein W [Vibrio cholerae]
Length = 214
Score = 40.6 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S S + D + G+DYM+N
Sbjct: 112 FGEANSTFRPYVGAGLNYTTFFDESFNGTGSSATLTDLKLDDSW--GLAANAGVDYMLND 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + + D K N + + F
Sbjct: 170 SWFLNASVWYANIETTATYKYDG--AAQSTDVKINPWVFMIAGGYKF 214
>gi|319903022|ref|YP_004162750.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
gi|319418053|gb|ADV45164.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
Length = 411
Score = 40.6 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 7/76 (9%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+GL + ++ + + GI G+ V+ + K
Sbjct: 36 GFYIGLKGGLPFG---MSTFSSFGADKTRFGMSGGIYGGYRF---SHVWSLEASAAFGKL 89
Query: 116 D-STFYRLKEKYFIYG 130
D S EK + G
Sbjct: 90 DMSAQDCCIEKGYWLG 105
>gi|291616837|ref|YP_003519579.1| OmpX [Pantoea ananatis LMG 20103]
gi|291151867|gb|ADD76451.1| OmpX [Pantoea ananatis LMG 20103]
Length = 172
Score = 40.6 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 40/140 (28%), Gaps = 9/140 (6%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK 123
+ + Y + G L + + G T + D T +
Sbjct: 21 GSAMAQSTVTGGYAQSDYQGVANKANGFNLKYRYEDGSNPLGWIGSFTYTEKDRTEDGIY 80
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K YG A D IYG+ G G N ++G+ D
Sbjct: 81 NKGQYYGITGGPAFRLNDWASIYGVVGVGYGKYQ---------QNDTASRGKTDTSDYGF 131
Query: 184 VLGIGLDYMVNYDISLSASY 203
G G+ + +++L Y
Sbjct: 132 SYGAGMQFNPMENVALDVGY 151
>gi|264680428|ref|YP_003280338.1| Opacity protein-like surface antigen [Comamonas testosteroni CNB-2]
gi|262210944|gb|ACY35042.1| Opacity protein-like surface antigen [Comamonas testosteroni CNB-2]
Length = 223
Score = 40.6 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 35/105 (33%), Gaps = 8/105 (7%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+YGM G G A + S N + +G G+ Y +S+
Sbjct: 123 RFSLYGMAGLGLARLESSGW----QGNPGRQYISDTQSNLAYSVGFGVSYSPVQKLSIDL 178
Query: 202 SYRYIPHHIHSVNNSN----AKSDVERVDRKGNAHIASLGINMHF 242
+RY+ +N E++ K A S+G+ F
Sbjct: 179 GWRYVDMGKAKSGANNFANVRGLQDEQMRAKLTASEISIGLRYSF 223
>gi|330893273|gb|EGH25934.1| outer membrane protein W [Pseudomonas syringae pv. mori str.
301020]
Length = 91
Score = 40.6 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH--IAS 235
+ +G+DYM+ ++ ++AS Y+ + + + V + + +
Sbjct: 25 KDSVGLAAQLGMDYMITDNVLVNASVWYVDIDTKATVDGPSALAVGKTKVDVDIDPWVYM 84
Query: 236 LGINMHF 242
+G+ F
Sbjct: 85 VGVGYKF 91
>gi|326567244|gb|EGE17364.1| Opa-like protein A [Moraxella catarrhalis 12P80B1]
Length = 215
Score = 40.6 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 59/202 (29%), Gaps = 27/202 (13%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG------INCH 109
G YV + D G GI G + L + IN
Sbjct: 26 GYYVQADLGYSNLEAKYNDNRPNDNKLEDKGLGYGISFGKDTDLARYALDYKNYGKINSS 85
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY-----GMGGFGGAYVIDSSLEKV 164
T +T + + L A Y D++ + G S++
Sbjct: 86 YTYQPQTNTSITSSGELKAQ-SLGLSAIYDFDTVSGFTPYAGARVGINQIKSTVSTVTTT 144
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA--SYRYIPHHIHSVNNSNAKSDV 222
+ S+ + + + G Y +N +S+ A Y Y+ K D
Sbjct: 145 AAAQSRTTHSQKQENKVGFGVLAGAQYAINPQLSVDAGVEYNYL-----------GKYDK 193
Query: 223 ERVDRKGNAHI--ASLGINMHF 242
D K AH A +G+ +F
Sbjct: 194 LDTDSKLKAHQYGAKVGLRHNF 215
>gi|300312394|ref|YP_003776486.1| hypothetical protein Hsero_3094 [Herbaspirillum seropedicae SmR1]
gi|300075179|gb|ADJ64578.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 202
Score = 40.6 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 26/194 (13%), Positives = 55/194 (28%), Gaps = 27/194 (13%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G+ L D + +G+ F +
Sbjct: 29 GVYLGVEGGVGNMDVDL-DAGAAVLSETSNVGVARAAIGYRFDRN---FAVEAGYFHTGA 84
Query: 116 DSTFYRLKEKYFIYGDVVLK-----AGYSVDSLLI--YGMGGFGGAYVIDSSLEKVESDN 168
++ + + K Y + L Y GG + S +
Sbjct: 85 YELKEQVGRGQYDHFSAKAKGFDLALIYRMTQFLPGLYVKGGL--IHSTVSGRLDEVQNQ 142
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
F G+ ++G+G + ++ ++SL+A Y + + +
Sbjct: 143 RVRESHTFSRSGAGYLMGLGYELDLSRELSLTAGY--------------TRLQQLAGESR 188
Query: 229 GNAHIASLGINMHF 242
N ++ S G+ F
Sbjct: 189 INLNLFSAGLRYRF 202
>gi|258625557|ref|ZP_05720445.1| outer membrane protein OmpW [Vibrio mimicus VM603]
gi|258582150|gb|EEW07011.1| outer membrane protein OmpW [Vibrio mimicus VM603]
Length = 214
Score = 40.6 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + ++ Y G D + D + +G+DYM+N
Sbjct: 112 FGEANSTIRPYVGAGLNYTTFFDEGFNSTGEGAGLSDLKLDDSW--GLAANVGVDYMLND 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + A D + D K N + + F
Sbjct: 170 SWFLNASVWYANIETTATYKAGA--DAKSTDVKINPWVFMIAGGYKF 214
>gi|260752248|ref|YP_003225141.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258551611|gb|ACV74557.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 366
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 50/197 (25%), Gaps = 19/197 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YV + L+ N ++ G ++ F ++ +
Sbjct: 26 WYVSVDGGGLFVEDIHYKLPNAQSARLGNKAGYDVDANVGYDFGPFRVEGEAAYKSSNNK 85
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD--------- 167
G V S ++ GM FGG S
Sbjct: 86 ----NFSVSGPNGGSSRNHGSTDVLSFMLNGMFDFGGKNDGVSGFIGGGVGVARVALNHY 141
Query: 168 --NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ + + + G+ V I YR+ + + + D+ +
Sbjct: 142 SLGGSGSFANDNDAHFAWQVIAGIRKPVTKMIDFELKYRFFNVNGLNFRTT----DMGNM 197
Query: 226 DRKGNAHIASLGINMHF 242
+ +H G+ +F
Sbjct: 198 SGRYRSHSVLAGLVFNF 214
>gi|325140719|gb|EGC63233.1| opacity protein [Neisseria meningitidis CU385]
Length = 230
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 26/125 (20%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV--------------- 184
D Y +V D +
Sbjct: 119 FDKFKPYIGARVAYGHVKHQVHSVETKTTIYTTAPTGDATVGGTIPERPSSKPAYHESNS 178
Query: 185 -------LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ G+ + + ++L YRY + + H SLG
Sbjct: 179 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 225
Query: 238 INMHF 242
+ HF
Sbjct: 226 MRYHF 230
>gi|21673352|ref|NP_661417.1| tia invasion determinant-related protein [Chlorobium tepidum TLS]
gi|21646447|gb|AAM71759.1| tia invasion determinant-related protein [Chlorobium tepidum TLS]
Length = 219
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y MGG G A+V + KV+ ++ D + LG GL + +++L YR
Sbjct: 133 PYLMGGLGAAFVDMGTSFKVDGVEYDSSY---DKTVFAWQLGAGLGIKITNNVALDLGYR 189
Query: 205 YIPHHIHSVNNSN 217
Y + N
Sbjct: 190 YFKTGDLDLENKT 202
>gi|52840298|ref|YP_094097.1| hypothetical protein lpg0042 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52627409|gb|AAU26150.1| hypothetical protein lpg0042 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 233
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 13/175 (7%)
Query: 79 KTYNSLLPNGLG-IELGHNIQLEDFV-FGINCHTTA--AKDDSTFYRLKEKYFIYGDVVL 134
++NS + G + G++ L + + + K +Y + L
Sbjct: 51 SSFNSAYTDFHGQLIAGYDFSLAPKISAAVEANIDLFTGKAKHRITEWYFNEDVYAEEQL 110
Query: 135 KAGYSVD-------SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
K GYS+ + ++ G G + + + N + + + + +
Sbjct: 111 KVGYSLFLLPTYHLNNMVQFFVGPGVSSSRFNIAFSNTAGNVGVSDS-LNEWLTGISIKA 169
Query: 188 GLDYMVNYDISLSASYRYIPHHIHS-VNNSNAKSDVERVDRKGNAHIASLGINMH 241
G + +I L +Y++ ++ + V D R K N + +G +H
Sbjct: 170 GSITKLTRNIDLLLTYQFTQYNSVTGVQMEPLSEDTLRGSYKPNVNTVLIGFKVH 224
>gi|120556550|ref|YP_960901.1| hypothetical protein Maqu_3645 [Marinobacter aquaeolei VT8]
gi|120326399|gb|ABM20714.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
Length = 401
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 46/172 (26%), Gaps = 17/172 (9%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHN---IQLEDFVFGINCHTTAAKDDSTFYRLKE 124
P +++ + N GI ++ Q+ V + A DS +
Sbjct: 240 AQAPANVSVDTVIADGERGNFYGIGASYDDGAWQIIGEVTRVEVDGKFADTDSAYLS--- 296
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
G+ S Y G+ + D L V + +
Sbjct: 297 -----------VGHRFGSWTPYIAVGWVESKDDDERLGFVTTTGGTPIAPESILNFQRED 345
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
IG + + +++ A Y + N N + N + +
Sbjct: 346 FSIGTRWDITPGVAIKADYTHSRGFEKGTGNLNPSYILASGTDSTNVYTLKI 397
>gi|238025985|ref|YP_002910216.1| outer membrane protein, OmpW family protein [Burkholderia glumae
BGR1]
gi|237875179|gb|ACR27512.1| Outer membrane protein, OmpW family protein [Burkholderia glumae
BGR1]
Length = 243
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 53/190 (27%), Gaps = 15/190 (7%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
P+ ++ + LGI G+ + +FV+GI S
Sbjct: 54 GGTPVNRSVANTGAGISDADTLGITTGYFVTDHIAAEFVYGIPPKFNLNGKGSLSPFGTL 113
Query: 125 KYFIYGDVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLE--KVESDNSKNAKGRFDG 178
+ + Y + Y G Y + L E++
Sbjct: 114 GHAYQWSPAVLLKYYFNSAEAKFRPYVGVGASYIYFTGAKLTNRTFENNVLGGPTNVTTS 173
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS--- 235
+ + V G +Y S YIP + + + + V + + AHI
Sbjct: 174 NQWAPVFNAGFNYNFTKHWFAGVSISYIPVSLTATLTTQRPTQVGTLTQTSQAHIKLNPI 233
Query: 236 ---LGINMHF 242
+ I F
Sbjct: 234 VSYVNIGYRF 243
>gi|320577078|gb|ADW54048.1| outer membrane protein A [Sodalis glossinidius]
Length = 137
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 44/143 (30%), Gaps = 19/143 (13%)
Query: 104 FGINCHTTAAK---DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDS 159
G + K + K Y + D L IY G ++
Sbjct: 3 LGFELGYDWLGRMAYKGSVNNGAFKAQGI-SLAAKLSYPLTDDLDIYTRLG----GMVWR 57
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ K DN + G S + + L+Y + + Y+++ N
Sbjct: 58 ADSKGAYDNGNAGRVSDYDTGVSPLAAVDLEYAWTKNWATRLDYQWV----------NNI 107
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 108 GDAGTVGTRPDNSMLSVGVSYRF 130
>gi|283856455|ref|YP_163089.2| OmpA/MotB domain-containing protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|283775459|gb|AAV89978.2| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 366
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 50/197 (25%), Gaps = 19/197 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YV + L+ N ++ G ++ F ++ +
Sbjct: 26 WYVSVDGGGLFVEDIHYKLPNAQSARLGNKAGYDVDANVGYDFGPFRVEGEAAYKSSNNK 85
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD--------- 167
G V S ++ GM FGG S
Sbjct: 86 ----NFSVSGPNGGSSRNHGSTDVLSFMLNGMFDFGGKNDGVSGFIGGGVGVARVALNHY 141
Query: 168 --NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ + + + G+ V I YR+ + + + D+ +
Sbjct: 142 SLGGSGSFANDNDAHFAWQVIAGIRKPVTKMIDFELKYRFFNVNGLNFRTT----DMGNM 197
Query: 226 DRKGNAHIASLGINMHF 242
+ +H G+ +F
Sbjct: 198 SGRYRSHSVLAGLVFNF 214
>gi|83591777|ref|YP_425529.1| OmpA family protein [Rhodospirillum rubrum ATCC 11170]
gi|83574691|gb|ABC21242.1| OmpA family protein [Rhodospirillum rubrum ATCC 11170]
Length = 340
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 50/187 (26%), Gaps = 6/187 (3%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YV LH + K + +
Sbjct: 28 GAYVALHGGVNFNVDQELSIPGAKGDAKTDTGYAAGGAAGYAFGGGPRLELEGTWRSNDL 87
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ +++ A Y + + + + G S + ++ K
Sbjct: 88 YKIGNLGTKGNLDSASLMVNAIYDIPTGTDFYP--YLGVGAGASWVFAEAKNSGAGFKAY 145
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
D + G+ Y V+ +I ++ YR++ S K+D + H
Sbjct: 146 DDDIAFAYQGIAGVGYNVDQNIGVTLDYRFLGTTGLDFKTSAGKADYDA----YYNHTVL 201
Query: 236 LGINMHF 242
+G+ F
Sbjct: 202 VGLRYSF 208
>gi|83646322|ref|YP_434757.1| outer membrane protein W [Hahella chejuensis KCTC 2396]
gi|83634365|gb|ABC30332.1| Outer membrane protein W [Hahella chejuensis KCTC 2396]
Length = 223
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 2/98 (2%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D L + K + D + +G+DY + ++ ++A+
Sbjct: 128 PYVGVGVNYTLFFDEELTSDFKGAMGDGKIKLD-NSFGAAFQLGVDYQLTDNLVVNAAVW 186
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I + + ++ + + + D + + +G+ F
Sbjct: 187 KIGIDTTATIDLDSGAQI-KTDVDIDPLVYMVGVGYKF 223
>gi|328473467|gb|EGF44315.1| outer membrane protein OmpA [Vibrio parahaemolyticus 10329]
Length = 319
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 51/174 (29%), Gaps = 31/174 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAAKDD 116
YVG + + + L D + LG +G+ + + D
Sbjct: 23 YVGGKMGKSW----LEDACVAGQSCDKDGSTLGAFVGYEF---NDYIALEAGFDNVGDFD 75
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T + + + K + + +YG G
Sbjct: 76 QTSFGGHVEA---ITLAPKFSLPITQDIALYGKVGGAYVMFDG----------------- 115
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
S + G+++ ++ +++ A Y+ I ++V+ + S V K
Sbjct: 116 --KDDYSYLGAAGVEFNLSQNVTARAEYQTITDISNNVSKAAGNSATLGVSFKF 167
>gi|307130968|ref|YP_003882984.1| outer membrane protein W [Dickeya dadantii 3937]
gi|306528497|gb|ADM98427.1| outer membrane protein W [Dickeya dadantii 3937]
Length = 210
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S D L Y G D + D + + V GLDY +N
Sbjct: 108 FGQSTDKLRPYLGVGLNYTMFFDEKFNQTGKDAGLSDLSLKNSW--GVAAQAGLDYNLNK 165
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+ S ++ + + + + + + + G F
Sbjct: 166 NWLLNMSVWWMDIDTTVKFKAAGQD--QSIKTRLDPWVFMFGFGYKF 210
>gi|258543609|ref|YP_003189042.1| outer membrane protein OmpW [Acetobacter pasteurianus IFO 3283-01]
gi|256634687|dbj|BAI00663.1| outer membrane protein OmpW [Acetobacter pasteurianus IFO 3283-01]
gi|256637743|dbj|BAI03712.1| outer membrane protein OmpW [Acetobacter pasteurianus IFO 3283-03]
gi|256640797|dbj|BAI06759.1| outer membrane protein OmpW [Acetobacter pasteurianus IFO 3283-07]
gi|256643852|dbj|BAI09807.1| outer membrane protein OmpW [Acetobacter pasteurianus IFO 3283-22]
gi|256646907|dbj|BAI12855.1| outer membrane protein OmpW [Acetobacter pasteurianus IFO 3283-26]
gi|256649960|dbj|BAI15901.1| outer membrane protein OmpW [Acetobacter pasteurianus IFO 3283-32]
gi|256652950|dbj|BAI18884.1| outer membrane protein OmpW [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656004|dbj|BAI21931.1| outer membrane protein OmpW [Acetobacter pasteurianus IFO 3283-12]
Length = 277
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 16/141 (11%), Positives = 40/141 (28%), Gaps = 8/141 (5%)
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-----DSLLIYGMGGFGGAYVIDSSL 161
+ + K + ++ Y G + + +
Sbjct: 140 EVAALGSDVPALGGPRKLDVGSAWVLPPTLTFAWHFRPHKRFNPYVGVGATAMWFHNMNG 199
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + F G + +G DY + + +A + + +H+ + A+S
Sbjct: 200 NRGSALGLTKLNAGFTG---GPSVNVGFDYQIVGNWFFNADVKQMFVRMHAWVENPAESL 256
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + S GI F
Sbjct: 257 KVKAHESLDPTVVSAGIAYRF 277
>gi|90410962|ref|ZP_01218976.1| outer membrane protein OmpW [Photobacterium profundum 3TCK]
gi|90328175|gb|EAS44486.1| outer membrane protein OmpW [Photobacterium profundum 3TCK]
Length = 212
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 26/98 (26%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G + + + D + GLDYM+N D + AS
Sbjct: 119 PYVGAGINYTTFFNEEFNAAGKNAGLSDLKLEDSW--GLAANAGLDYMINDDWFVGASVW 176
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + D + S G F
Sbjct: 177 YADISTDVKFKAGTDDVTIKTDIDPWVFMISGG--YKF 212
>gi|303327622|ref|ZP_07358063.1| putative invasin [Desulfovibrio sp. 3_1_syn3]
gi|302862562|gb|EFL85495.1| putative invasin [Desulfovibrio sp. 3_1_syn3]
Length = 225
Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 14/166 (8%)
Query: 88 GLGIELGHNI---QLEDFVFGIN----CHTTAAKDDSTFYRLKEKYFIY-GDVVLKAGYS 139
G + LG++ Q+ I ++ D K + +
Sbjct: 63 GGALALGYDFWPQQMLPLRAEIEFAMRGNSEKTWSDGGVNVRDVKGTWNNSTLFANLFWD 122
Query: 140 VDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
+ Y G G A+ S + +A RF + +G+G Y N +
Sbjct: 123 FHNDSAFTPYIGAGLGLAFNYTGYDFTTNSGDKFSADDRF--TNFAWNVGVGASYSFNEN 180
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ ASYR++ + V +++ + + LG+ F
Sbjct: 181 LAIDASYRFVGLGYNEV-TAHSNGSKYEIGSDPYNNEFMLGLRFAF 225
>gi|237757037|ref|ZP_04585488.1| toluene transport protein [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237690805|gb|EEP59962.1| toluene transport protein [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 406
Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 56/210 (26%), Gaps = 39/210 (18%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA----- 113
VGL ++ + G+G LG ++ D G N + +
Sbjct: 164 VGLDLAYGSLDMGATMPFGNASGGQSSSYGIGARLGIGYKIGDLTLGFNYQSPVSLKYKH 223
Query: 114 --KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D K +V GY +L G ++ S +
Sbjct: 224 VFDSDGDGSYEDLKLQQPQEVAAGIGY---RVLPNLKVGLDLRWINWSDAD--------- 271
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY----------IPHHIHSVNNSNAKSD 221
+ V+ +G +Y VN + L A Y Y + + N N
Sbjct: 272 -GYKQFKWKDQTVVAVGGEYQVNLALKLRAGYNYGKSPIRSYSGLDVTNRTNNIPNFTGS 330
Query: 222 VERVDRK---------GNAHIASLGINMHF 242
D + H S G + F
Sbjct: 331 FTDFDVQWFNLIGFPAITEHHISFGGSYQF 360
>gi|28897538|ref|NP_797143.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|153839084|ref|ZP_01991751.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|260364598|ref|ZP_05777200.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
gi|260878297|ref|ZP_05890652.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|260898127|ref|ZP_05906623.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|260901940|ref|ZP_05910335.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|28805750|dbj|BAC59027.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|149747422|gb|EDM58382.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|308086135|gb|EFO35830.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|308090168|gb|EFO39863.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|308106787|gb|EFO44327.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|308115125|gb|EFO52665.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
Length = 319
Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 51/174 (29%), Gaps = 31/174 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAAKDD 116
YVG + + + L D + LG +G+ + + D
Sbjct: 23 YVGGKMGKSW----LEDACVAGQSCDKDGSTLGAFVGYEF---NDYIALEAGFDNVGDFD 75
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T + + + K + + +YG G
Sbjct: 76 QTSFGGHVEA---ITLAPKFSLPITQDIALYGKVGGAYVMFDG----------------- 115
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
S + G+++ ++ +++ A Y+ I ++V+ + S V K
Sbjct: 116 --KDDYSYLGAAGVEFNLSQNVTARAEYQTITDISNNVSKAAGNSATLGVSFKF 167
>gi|94495792|ref|ZP_01302371.1| outer membrane protein-like [Sphingomonas sp. SKA58]
gi|94424484|gb|EAT09506.1| outer membrane protein-like [Sphingomonas sp. SKA58]
Length = 169
Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 40/144 (27%), Gaps = 19/144 (13%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ T+ G+ G+++ L + G + L
Sbjct: 27 FTGPRAGVTMGYDKIGGEDGFAYGVTAGYDLALAPRIVGG-VEVSLGDTTVDDSGLDVSR 85
Query: 127 FIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
I + +AGY V +L +G G+ V
Sbjct: 86 DIAASL--RAGYVVTPRVLAFGKVGYASTRFEFD---------------GDGAGLEGVRY 128
Query: 186 GIGLDYMVNYDISLSASYRYIPHH 209
G GL++ + +SA Y+ +
Sbjct: 129 GGGLEFAATPNTYISAEYQRTEYE 152
>gi|260778059|ref|ZP_05886952.1| outer membrane protein OmpW [Vibrio coralliilyticus ATCC BAA-450]
gi|260606072|gb|EEX32357.1| outer membrane protein OmpW [Vibrio coralliilyticus ATCC BAA-450]
Length = 215
Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D L + + D + +G+DYM+N
Sbjct: 113 FGDASSEIRPYVGAGINYTVFFDEELNGTGTGAGLSDLSLDDSW--GLAANLGVDYMLNE 170
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D L+AS Y + + S D + + + +G F
Sbjct: 171 DWFLNASVWYADIDTTATYKAG--STEFSTDVQIDPWVFMIGGGYKF 215
>gi|242239370|ref|YP_002987551.1| outer membrane protein W [Dickeya dadantii Ech703]
gi|242131427|gb|ACS85729.1| OmpW family protein [Dickeya dadantii Ech703]
Length = 210
Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S D L Y G + + + V GLDY +N
Sbjct: 108 FGQSADKLRPYLGLGVNYTTFFGEKFNQTGENAGLSDLSLKSSW--GVAAQAGLDYNLNK 165
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+ S ++ + + + + + + G F
Sbjct: 166 NWLLNMSVWWMDIDTTVKFKAGD--SEQSIKTRLDPWVFMFGFGYKF 210
>gi|153830766|ref|ZP_01983433.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148873750|gb|EDL71885.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 344
Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 34/147 (23%), Gaps = 12/147 (8%)
Query: 99 LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD---VVLKAGYSVDSLLIYGMGGFGGAY 155
++ G+ + ++ + + YS D G A
Sbjct: 207 FGNWELGVELYYQIKDNEDRQANGGINEISDFNEKYIEPIVQYSFDD------AGVLYAR 260
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
V E + NS D +G + V L Y Y
Sbjct: 261 VRVGKNETNNAANSGGGNANVDYFKDIRKATLGYEQAVGDSWLLKGEYEYANEVEEKSKL 320
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ E + H F
Sbjct: 321 AGWEAKNES---ELKQHTVYFQALYRF 344
>gi|417404|sp|Q05034|OPA67_NEIGO RecName: Full=Opacity protein opA67; Flags: Precursor
gi|940804|emb|CAA79375.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 233
Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 13/91 (14%)
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
GA ++ + + + + G+ + + +++L A YRY
Sbjct: 156 AGARGAAPTVSSPYKNTQDAHQESNSIRRVGLGVIAGVGFDITPNLTLDAGYRYHNWGRL 215
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 216 E-------------NTRFKTHEASLGVRYRF 233
>gi|241761684|ref|ZP_04759771.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241373992|gb|EER63525.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 363
Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 21/192 (10%), Positives = 52/192 (27%), Gaps = 12/192 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YV + L+ N ++ G ++ F + +
Sbjct: 26 WYVSVDGGGLFVEDIHYKLPNAQSARMGNKAGYDVDANVGYDFGPFR--VEGEAAYKSSN 83
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYG------MGGFGGAYVIDSSLEKVESDNSK 170
+ + + ++ + +G G GG + S
Sbjct: 84 NGNFSAGGTTAKSHGSTDVLSFMLNGMFDFGGKNDGVSGFIGGGVGVARVALNHYSLGGG 143
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
N+ + + + G+ V I YR+ + + + D+ + +
Sbjct: 144 NSFANDNDAHFAWQVIAGIRKPVTKMIDFELKYRFFNVNGLNFRTT----DMGNMSGRYR 199
Query: 231 AHIASLGINMHF 242
+H G+ +F
Sbjct: 200 SHSVLAGLVFNF 211
>gi|217331209|gb|ACK38248.1| OmpW [Vibrio cholerae]
Length = 173
Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 33/107 (30%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S + D + G+DYM+N
Sbjct: 71 FGEANSTFRPYVGAGLNYTTFFDESFNGTGRSATLTDLKLDDSW--GLAANAGVDYMLND 128
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + A D + D K N + + F
Sbjct: 129 SWFLNASVWYANIETTATYKAGA--DAKSTDVKINPWVFMIAGGYKF 173
>gi|148974245|ref|ZP_01811778.1| hypothetical protein VSWAT3_13997 [Vibrionales bacterium SWAT-3]
gi|145965942|gb|EDK31190.1| hypothetical protein VSWAT3_13997 [Vibrionales bacterium SWAT-3]
Length = 190
Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 50/168 (29%), Gaps = 22/168 (13%)
Query: 76 INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLK 135
+ + G + G+ + + G+ + V
Sbjct: 44 TDGQGNLDSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYKQGTAKVSPTSVSVSAN 98
Query: 136 AGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
GY+ D+ + + + G + + + D G+ G+G++Y
Sbjct: 99 LGYTFDNTIRPFVLAGLSSVDLNANKSAGYD-----------DDSGTGFHFGLGVEYTPI 147
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++L +V+ N + D+ SLG + +F
Sbjct: 148 ENLTLRL-----ISQADAVSVENYYGQYKTDDKTLAFSSVSLGGSYNF 190
>gi|107027296|ref|YP_624807.1| porin, opacity type [Burkholderia cenocepacia AU 1054]
gi|116691307|ref|YP_836840.1| porin, opacity type [Burkholderia cenocepacia HI2424]
gi|105896670|gb|ABF79834.1| porin, opacity type [Burkholderia cenocepacia AU 1054]
gi|116649307|gb|ABK09947.1| porin, opacity type [Burkholderia cenocepacia HI2424]
Length = 236
Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 8/102 (7%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG G G A V + ++ + G G+ Y +N ++ YR
Sbjct: 139 VYGTLGVGVAIVSAEGWQGNDTRR----FASKTQTNLAYSAGAGVSYAINKRFTIDVGYR 194
Query: 205 YIPHHIHSVNNSNAKSDVERVD----RKGNAHIASLGINMHF 242
Y+ + + V D K +++ +G+ F
Sbjct: 195 YVDMGNVETGFNTFVNRVSARDEQLKSKLSSNEVFIGLRGRF 236
>gi|254515627|ref|ZP_05127687.1| hypothetical protein NOR53_3696 [gamma proteobacterium NOR5-3]
gi|219675349|gb|EED31715.1| hypothetical protein NOR53_3696 [gamma proteobacterium NOR5-3]
Length = 225
Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 53/196 (27%), Gaps = 19/196 (9%)
Query: 56 GNYVG-LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
G Y G + P + ++ G +G+ + G+
Sbjct: 40 GGYSGLADTDGTIDGFPGTTPWDTVDVSTTGGFTAGAGVGYRY---NQRLGVELAWEYRS 96
Query: 115 DDSTFYRLKEKYFIYGDVVLKA----GYSV----DSLLIYGMGGFGGAYVIDSSLEKVES 166
+DS F G+ GY + Y G +D LE
Sbjct: 97 NDSETEFGDGTSFSDGNYASNTFFLNGYYYLAPRGAWEPYVGAGLAWIQEVDIDLEGNGP 156
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ S ++ G + + +G Y + + RY + N + D
Sbjct: 157 ERSFSSDGD-----VGLQMFVGSTYSLGERWAAHGELRYGAITGIDLEGENNAGVISGFD 211
Query: 227 RKGNAHIASLGINMHF 242
+ +G+ F
Sbjct: 212 YEP--FTLQIGLTYRF 225
>gi|16125000|ref|NP_419564.1| OmpA family protein [Caulobacter crescentus CB15]
gi|221233721|ref|YP_002516157.1| heat resistant agglutinin [Caulobacter crescentus NA1000]
gi|13421980|gb|AAK22732.1| OmpA family protein [Caulobacter crescentus CB15]
gi|220962893|gb|ACL94249.1| heat resistant agglutinin [Caulobacter crescentus NA1000]
Length = 407
Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 25/235 (10%), Positives = 63/235 (26%), Gaps = 27/235 (11%)
Query: 25 AVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE-THPLADTINRKTYNS 83
A D D+ + ++ + W+ + + + + +
Sbjct: 32 AGDAGYHEPQDVKATSSKGYQWNFNADKDWAAF---GRLGYRFSPNWRVEAEYGYRPSDL 88
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-- 141
G G+ G+ S ++ + +
Sbjct: 89 QGVRGAGL-------SGAQPIGLCTAGVGRTSASPGCGEPNGELKASTLMANLIFDMGGD 141
Query: 142 -SLLIYGMGGFGGAYVIDSSLEKVESDNSKNA---KGRFDGHGSSVVLGI--GLDYMVNY 195
L + G G A+V + ++ + A FD + + G+ +
Sbjct: 142 SRLSPFIGVGAGTAWVHNKVYGQLSGVPAGAAIYQNTGFDDVDQAFAMQGLLGVAWNFAD 201
Query: 196 DISLSASYRYIPHHI--------HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S+ + RY+ ++ + +DV + +LG+ F
Sbjct: 202 NWSMDLTGRYLRSSKLDWGSVTQNAGPAGGSITDVGTFSGRYKDTSVTLGLRYTF 256
>gi|323136022|ref|ZP_08071105.1| hypothetical protein Met49242DRAFT_0492 [Methylocystis sp. ATCC
49242]
gi|322399113|gb|EFY01632.1| hypothetical protein Met49242DRAFT_0492 [Methylocystis sp. ATCC
49242]
Length = 267
Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 52/224 (23%), Gaps = 46/224 (20%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF---------- 104
S Y+ + D + T + +G+ G+ Q +++
Sbjct: 49 SNWYLRGQVGAADHNISTVDGMRLST-SWPSNWTIGLGGGY--QFTNWLRADATVDYQEL 105
Query: 105 ---------------------GINCHTTAAKD-DSTFYRLKEKYFIYGDVVLKAGYSVDS 142
GI + E + L G
Sbjct: 106 WDRNGLQFGQPCVGMDIYGPGGIVVNAPYPAICTPGVKNRAESISFMANAYLDLGNWWG- 164
Query: 143 LLIYGMGGFGGA------YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
Y G G V+ S + + D + G+ Y ++
Sbjct: 165 FTPYVGAGVGANLFIQRHNVMWSPAFYPYVNFAPATGVSSDYLRFAYAGMAGVSYDIDSH 224
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ YR+I +R+ R +H LG
Sbjct: 225 WKIDLGYRFINLG----QLQGFDIYNQRISRDMTSHQLRLGFRY 264
>gi|240016972|ref|ZP_04723512.1| outer membrane preprotein PIIc [Neisseria gonorrhoeae FA6140]
Length = 213
Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 15/80 (18%)
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S + + G V G+G+D + +++L A YRY
Sbjct: 149 GPTSKPAHHESRSVSSLGFGAVAGVGID--ITPNLTLDAGYRYHNWGRLE---------- 196
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 197 ---NTRFKTHEASLGMRYRF 213
>gi|94498437|ref|ZP_01304994.1| OmpW [Sphingomonas sp. SKA58]
gi|94422085|gb|EAT07129.1| OmpW [Sphingomonas sp. SKA58]
Length = 234
Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 27/102 (26%), Gaps = 4/102 (3%)
Query: 145 IYGMGGFGGAYVIDS-SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
Y G + V+ +G + + + L +Y
Sbjct: 133 PYVGAGVNYTSFANRHVSAGYTGAFGGTGSSSKLKDSWGPVVKLGAEIPIAKNWMLDMAY 192
Query: 204 R--YIPHHIHSVNNSNAKSDVERV-DRKGNAHIASLGINMHF 242
+I + D+ R D K + + SL + F
Sbjct: 193 SRYWIDTRATLTTTTPGVGDIARTIDVKVDPGVFSLMVGYRF 234
>gi|113953996|ref|YP_729839.1| hypothetical protein sync_0621 [Synechococcus sp. CC9311]
gi|113881347|gb|ABI46305.1| hypothetical protein sync_0621 [Synechococcus sp. CC9311]
Length = 265
Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 56/230 (24%), Gaps = 43/230 (18%)
Query: 56 GNYVGLHISRLYETHP---------LADTINRKTYNSLLPNGLGIELGHN---------- 96
G Y+ L + + LG G +
Sbjct: 36 GPYLRLGAGVQWPETSALKDQRCSSTSPPALFGCGPGDDGRSLGAYGGFDQAPVVDAAIG 95
Query: 97 IQLEDFV-----------FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA-GYSVDSLL 144
+ ++ ++ + + G VL G S+ ++
Sbjct: 96 YRWTSWLRTEALLNWSPQLNVSAQSNFLGAGPNQPVRSSGNGLAGFGVLYVDGPSIATVR 155
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNA---KGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+ G G A + + S +A + +L G+ V+ + L
Sbjct: 156 PFIGAGLGAARTSLADVTYRFPAISSDAVTVTSGGRSTSFAYLLTAGVSIPVSEKLDLDL 215
Query: 202 SYRYIPHHIHSVNNSNA---------KSDVERVDRKGNAHIASLGINMHF 242
+YR+ N +A ++ + + + F
Sbjct: 216 AYRWTDLGTVKTNAGSAKIVRPAGRSNLEIAGTEIDLQSQAVLASLRFRF 265
>gi|129221|sp|P11296|OPAC_NEIGO RecName: Full=Opacity protein opA50; AltName: Full=V0; AltName:
Full=opA30; Flags: Precursor
gi|940789|emb|CAA79360.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 236
Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 28/121 (23%), Gaps = 32/121 (26%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG-------------------RFDGHGS 181
D Y +V S +
Sbjct: 129 DKFKPYIGARVAYGHVRHSIDSTKKITGLLTTSTPGIMSGVYKVLRTPGAHRESDSIRRV 188
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + G+ + + ++L A YRY + + H ASLG+
Sbjct: 189 GLGVIAGVGFDITPKLTLDAGYRYHNWGRLE-------------NTRFKTHEASLGVRYR 235
Query: 242 F 242
F
Sbjct: 236 F 236
>gi|296284988|ref|ZP_06862986.1| putative outer membrane protein [Citromicrobium bathyomarinum
JL354]
Length = 206
Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 46/161 (28%), Gaps = 18/161 (11%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG YV ++ GI G+++ L G+ +A+
Sbjct: 34 SGLYVQAIAGY---EGVEVESSGNTVTADADSVVYGIAAGYDLSLGGVFVGVEGEYSASG 90
Query: 115 DDS------TFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ R + + +AG + ++ YG G+ S
Sbjct: 91 SSTEFPDSFAGARDGLESDGQYYLGARAGVPITGAISAYGKVGYTALDTR--------SF 142
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
+ + + + + G G+ + + YR +
Sbjct: 143 TTAGSFADVEENATGFRFGGGVQLDLPGPLEARMEYRRSRY 183
>gi|227326061|ref|ZP_03830085.1| outer membrane protein W [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 210
Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + D L Y G D + + V GLDY ++
Sbjct: 108 FGDAQDKLRPYLGVGLNYTLFFDEKFNDTGKGAGLSDLSLKNSW--GVAAQAGLDYNLDK 165
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ S ++ + +D + + K + G+ F
Sbjct: 166 NWLVNMSVWWMDIDTDVKFKAG--NDQQSIHTKIDPWAFMFGVGYRF 210
>gi|160900268|ref|YP_001565850.1| OmpW family protein [Delftia acidovorans SPH-1]
gi|160365852|gb|ABX37465.1| OmpW family protein [Delftia acidovorans SPH-1]
Length = 204
Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 28/103 (27%), Gaps = 8/103 (7%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+ Y G S + + L IG DY ++ + SL
Sbjct: 110 FGAFKPYVGAGVNYTRF---SSVSFDPAVQAALNPSIKKNSFGGALQIGFDYALDKNWSL 166
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + + K N + +G+ F
Sbjct: 167 N-----FDVKKVFIETDVSSAGTKVGTFKVNPVLVGVGLGYRF 204
>gi|262368825|ref|ZP_06062154.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262316503|gb|EEY97541.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 426
Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 53/153 (34%), Gaps = 13/153 (8%)
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G I++ +G N A F +E G YSV +L GF
Sbjct: 206 GGGTIRIPQVRYGFNL----APATKLFIAAEEGNSNSGSSDAAIKYSVPNLTAKLTQGFA 261
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
S+ VE+ S N + + G++Y V + LSA Y+ + +
Sbjct: 262 DGKGSVSARALVENYKSAN------DSDTGWGVAAGVNYQVMDPLKLSADVSYVDGNSNY 315
Query: 213 VNNSNAKSDVERVDRK---GNAHIASLGINMHF 242
++ SN+ V + K A +G F
Sbjct: 316 LHGSNSAYVVNTSNGKIAQNEAFGVQVGGTYKF 348
>gi|189500030|ref|YP_001959500.1| surface antigen msp4 family protein [Chlorobium phaeobacteroides
BS1]
gi|189495471|gb|ACE04019.1| surface antigen msp4 family protein [Chlorobium phaeobacteroides
BS1]
Length = 190
Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 54/177 (30%), Gaps = 17/177 (9%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR 121
++S L D+ + GL + + + + + + +
Sbjct: 27 YVSGSAGIAMLEDSDLGSGFTWPYDTGLALAVAAGLDMGNLRLEAEVGYQDNGIEESDDL 86
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+ ++ + Y G G A V + + A
Sbjct: 87 EINITTFMANGYYDLELPLNPVKPYVTAGIGVADVNAKGFSFDDDSSLVLAGQ------- 139
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+G+G + V ++L A YRY+ ++A+ D + ++H LG+
Sbjct: 140 ---IGVGAGFAVAPMVNLDARYRYLM-------TTDAEFDGDPDKIGIDSHNVMLGL 186
>gi|153837108|ref|ZP_01989775.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|149749696|gb|EDM60441.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
Length = 325
Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 44/191 (23%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV---FGIN--CHTTA 112
Y+G + + L D G+ +G+N ++V +G++ TA
Sbjct: 26 YIGGKVGY----NSLNDACYLNEPCDDDSFATGMHIGYN--FNEYVAAEYGVDYLGDFTA 79
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + K + DS ++ G D
Sbjct: 80 NFKKPGLNTVDGDL-WALTLAPKFNLPLTDSWNLFAKVGAAYMMAGDEKDFVPTGS---- 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+G +Y +NY+ SL A Y+ + +
Sbjct: 135 ---------------LGAEYKINYNWSLRAEYQRYQDMSDDIIDDMDSDFFG-------- 171
Query: 232 HIASLGINMHF 242
+G N F
Sbjct: 172 ----IGFNYKF 178
>gi|117574274|gb|ABK41121.1| OlpA [Moraxella catarrhalis]
Length = 215
Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 56/202 (27%), Gaps = 27/202 (13%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG------INCH 109
G YV + D G GI G + L + IN
Sbjct: 26 GYYVQADLGYSNLEAKYNDNRPNDNKLEDKGLGYGISFGKDTDLARYALDYKNYGKINSS 85
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
T +T + + L A Y D++ + + +
Sbjct: 86 YTYQPQTNTSITSSGELKAQ-SLGLSAIYDFDTVSGFTPYAGARVDINQIKSTVSTVTTT 144
Query: 170 KNAKGRFD-----GHGSSVVLGIGLDYMVNYDISLSA--SYRYIPHHIHSVNNSNAKSDV 222
A+ R + + G Y +N +S+ A Y Y+ K D
Sbjct: 145 AAAQSRTTHSQKQENKVGFGVLAGAQYAINPQLSVDAGVEYNYL-----------GKYDK 193
Query: 223 ERVDRKGNAHI--ASLGINMHF 242
D K AH A +G+ +F
Sbjct: 194 LDTDSKLKAHQYGAKVGLRHNF 215
>gi|44903|emb|CAA43121.1| opaH v18 [Neisseria gonorrhoeae]
Length = 239
Score = 40.2 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++N + + G+ + + ++L A YRY
Sbjct: 167 NGAVTTYNTDPKTQNDYQSNSIRRVGLGVIAGVGFDITPKLTLDAGYRYHNWGRLE---- 222
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 223 ---------NTRFKTHEASLGMRYRF 239
>gi|254227964|ref|ZP_04921394.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262396053|ref|YP_003287906.1| outer membrane protein A precursor [Vibrio sp. Ex25]
gi|151939460|gb|EDN58288.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262339647|gb|ACY53441.1| outer membrane protein A precursor [Vibrio sp. Ex25]
Length = 326
Score = 40.2 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 52/192 (27%), Gaps = 46/192 (23%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV---FGIN--CHTTA 112
Y+G + + L D + LG++ ++V +G++ TA
Sbjct: 26 YMGGKVGY----NSLNDACYLNEPCDDDSFAASMHLGYS--FNEYVAAEYGVDYLGDFTA 79
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + K + DS ++ G D
Sbjct: 80 NFKKPGLNTVDGDL-WALTLAPKFNLPLTDSWNLFAKVGAAYMMAGDEKDFVPTGS---- 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGN 230
+G +Y +NY+ SL A Y RY + +
Sbjct: 135 ---------------LGAEYKINYNWSLRAEYQRYQDMSDDVIE-------------DMD 166
Query: 231 AHIASLGINMHF 242
+ +G N F
Sbjct: 167 SDFFGIGFNYKF 178
>gi|299533012|ref|ZP_07046399.1| Opacity protein-like surface antigen [Comamonas testosteroni S44]
gi|298719236|gb|EFI60206.1| Opacity protein-like surface antigen [Comamonas testosteroni S44]
Length = 223
Score = 40.2 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 36/102 (35%), Gaps = 8/102 (7%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YGM G G A + S N + + +G G+ Y +S+ +R
Sbjct: 126 LYGMAGLGLARLESSGW----QGNPGRQYISDTQNNLAYSVGFGVSYSPVQKLSIDLGWR 181
Query: 205 YIPHHIHSVNNSN----AKSDVERVDRKGNAHIASLGINMHF 242
Y+ +N E++ K A S+G+ F
Sbjct: 182 YVDMGKAKSGANNFANVRGLQDEQMRAKLTASEISIGLRYSF 223
>gi|260440695|ref|ZP_05794511.1| opacity outermembrane protein [Neisseria gonorrhoeae DGI2]
gi|291044006|ref|ZP_06569722.1| opacity outermembrane protein [Neisseria gonorrhoeae DGI2]
gi|291012469|gb|EFE04458.1| opacity outermembrane protein [Neisseria gonorrhoeae DGI2]
Length = 153
Score = 40.2 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 32/121 (26%), Gaps = 34/121 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLE-------------------KVESDNSKNAKGRFDGHGS 181
D Y +V ++ + G
Sbjct: 48 DKFKPYIGARVAYGHVKHQVHSVESKTRIVTSKPKGGPVKEGPTPKSAYHESRSISSLGF 107
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
V G+G+D + +++L A YRY + + H ASLG+
Sbjct: 108 GAVAGVGID--ITPNLTLDAGYRYHNWGRLE-------------NTRFKTHEASLGMRYR 152
Query: 242 F 242
F
Sbjct: 153 F 153
>gi|227111436|ref|ZP_03825092.1| outer membrane protein W [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 210
Score = 39.8 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + D L Y G D ++ S + + GLDY ++
Sbjct: 108 FGDTQDKLRPYLGVGLNYTMFFDEKF--NDTGTSAGLSDLSLKNSWGLAAQAGLDYNLDK 165
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+ S ++ + +D + + K + G+ F
Sbjct: 166 NWLLNMSVWWMDIDTDVKFKAG--NDQQSIHTKLDPWAFMFGVGYRF 210
>gi|153834458|ref|ZP_01987125.1| outer membrane protein OmpA [Vibrio harveyi HY01]
gi|148869154|gb|EDL68186.1| outer membrane protein OmpA [Vibrio harveyi HY01]
Length = 318
Score = 39.8 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 58/187 (31%), Gaps = 43/187 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAAKDD 116
YVG + + + + D + LG +G+ + + F + D
Sbjct: 23 YVGGKMGKSW----MEDACVAGQACDKDGSTLGAFVGYEM---NDYFSVEAGFDNLGDFD 75
Query: 117 STFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T + + + K + + + +YG G + D
Sbjct: 76 QTSFGGHVEA---ITLAPKFSLPITEDIALYGKVGGAYLMMNDG---------------- 116
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
S + G+++ V+ +++ A Y+ +D+ K + A+
Sbjct: 117 --KDDYSYLGAAGVEFNVSENVTARAEYQ-------------TITDISNDSVKAMGNSAT 161
Query: 236 LGINMHF 242
LG+ F
Sbjct: 162 LGVAFKF 168
>gi|186472115|ref|YP_001859457.1| cellulose synthase domain-containing protein [Burkholderia phymatum
STM815]
gi|184194447|gb|ACC72411.1| cellulose synthase operon C domain protein [Burkholderia phymatum
STM815]
Length = 1542
Score = 39.8 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 51/154 (33%), Gaps = 17/154 (11%)
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
+G+G ++G+ + G+ A + G++ K Y +
Sbjct: 1245 SGVGADVGYEWR------GLKADVGATPWGFREQNIVGGVQYRGNITDKVSYKLT----- 1293
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G V DS L + +S + + G D + ++AS+ Y+
Sbjct: 1294 ----AGRRGVTDSLLSYAGAHDSAMNLQWGGVTSNGLRGDAGWD-DGTNGLYVNASWAYL 1348
Query: 207 PHHIHSVNNS-NAKSDVERVDRKGNAHIASLGIN 239
H + NN+ V K ++G+N
Sbjct: 1349 MGHNVASNNAVKGGGGVYTRLVKDTDQTLTVGVN 1382
>gi|293399358|ref|ZP_06643520.1| opacity protein opA66 [Neisseria gonorrhoeae F62]
gi|291610227|gb|EFF39340.1| opacity protein opA66 [Neisseria gonorrhoeae F62]
Length = 227
Score = 39.8 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 25/91 (27%), Gaps = 13/91 (14%)
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + + + G+ + + +++L A YRY
Sbjct: 150 AAGQDGGAPTVYNNGSTQDAHQESDSIRRVGLGVIAGVGFDITPNLTLDAGYRYHNWGRL 209
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 210 E-------------NTRFKTHEASLGMRYRF 227
>gi|240017567|ref|ZP_04724107.1| protein II [Neisseria gonorrhoeae FA6140]
Length = 261
Score = 39.8 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 15/77 (19%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ + G V G+G+D + +++L A YRY
Sbjct: 200 PQPAYHESRSISSLGFGAVAGVGID--ITPNLTLDAGYRYHNWGRLE------------- 244
Query: 226 DRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 245 NTRFKTHEASLGVRYRF 261
>gi|86156963|ref|YP_463748.1| outer membrane protein, OmpW [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773474|gb|ABC80311.1| outer membrane protein, OmpW [Anaeromyxobacter dehalogenans 2CP-C]
Length = 208
Score = 39.8 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 11/129 (8%), Positives = 38/129 (29%), Gaps = 10/129 (7%)
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + R+ + + ++ + + Y G + + + K
Sbjct: 90 DVELSGARIGTFSHLPPTLTVQGHLPLGRVKPYLGAGV-----NFTLVTATDLAVPGVGK 144
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ + G+D + +A +Y+ ++ + + + + + +
Sbjct: 145 LELEDYSFGFAAQAGVDVQLAGPWYANADVKYV-----TIRSDVKAGGTKVSEVRVDPWL 199
Query: 234 ASLGINMHF 242
GI F
Sbjct: 200 IGGGIGYRF 208
>gi|325138666|gb|EGC61222.1| opacity protein [Neisseria meningitidis ES14902]
Length = 128
Score = 39.8 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 28/124 (22%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V + +K ++
Sbjct: 18 DKFKPYIGARVAYGHVKHQVHSVETKTTTVTSKPTATSPQGGPIIQTDPSKPPYHESHSI 77
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H SLG+
Sbjct: 78 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 124
Query: 239 NMHF 242
HF
Sbjct: 125 RYHF 128
>gi|254669632|emb|CBA03684.1| putative lipoprotein [Neisseria meningitidis alpha153]
Length = 231
Score = 39.8 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 29/124 (23%), Gaps = 34/124 (27%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------------------- 180
D Y +V + + +K
Sbjct: 121 FDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSATKPGQIPSLVTKPAYHESHSI 180
Query: 181 --SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 181 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 227
Query: 239 NMHF 242
HF
Sbjct: 228 RYHF 231
>gi|187479773|ref|YP_787798.1| outer membrane protein [Bordetella avium 197N]
gi|115424360|emb|CAJ50913.1| outer membrane protein [Bordetella avium 197N]
Length = 211
Score = 39.8 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 30/92 (32%), Gaps = 5/92 (5%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G + + ++ + + +G+D ++ L+A RYI
Sbjct: 125 YVGVGLNYTHFFDTQARGALAGSNLKLKDSWGLAGQVGVDVKLSERWFLNADLRYIDISS 184
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + N +A++G+ F
Sbjct: 185 KVKLDGERIGTA-----RINPWVATVGVGYRF 211
>gi|99078343|ref|YP_611601.1| MltA-interacting MipA [Ruegeria sp. TM1040]
gi|99035481|gb|ABF62339.1| MltA-interacting MipA [Ruegeria sp. TM1040]
Length = 258
Score = 39.8 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 16/185 (8%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
GL + + + + D + + + G L Q F +G+ D
Sbjct: 88 GLGVGYDFTSRSVEDDLRLAGLSDVD-AGAMATLFLEYQTGPFSYGLEVMRGLNSDGHEG 146
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
R K + +AG SV LI + +DS + + + +D +
Sbjct: 147 TRAKLSGGYDIQLSERAGLSVSPYLI-----WADDNWMDSFFSVSNAQSVASGLAAYDAN 201
Query: 180 GSSVVLGIGL--DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G+ L Y + + + AS Y + ++S V NA S G
Sbjct: 202 AGMSQAGLNLTASYALREQVIVFASVDYATLLGDAADSS--------VSFDDNAASLSAG 253
Query: 238 INMHF 242
+ F
Sbjct: 254 VMFRF 258
>gi|196019172|ref|XP_002118934.1| hypothetical protein TRIADDRAFT_62916 [Trichoplax adhaerens]
gi|190577648|gb|EDV18580.1| hypothetical protein TRIADDRAFT_62916 [Trichoplax adhaerens]
Length = 278
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 33/106 (31%), Gaps = 6/106 (5%)
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVES 166
+ D + Y K+ + Y+ D+ + + G G + +
Sbjct: 87 FKYSAIDPSKYSYKQDIS-SDTYTINTQYNFDNNSKIFPFLRMGVGISKNKLGKYNVINL 145
Query: 167 DNSKNAKG--RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
D++ + + +G GL Y ++ + + Y Y
Sbjct: 146 DDNSKKYTLDSNKSNNFTFNIGAGLGYKISEKLYVDFRYEYTDLGK 191
>gi|14578760|gb|AAK68987.1| major outer membrane protein [Erwinia tracheiphila]
Length = 149
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 10/67 (14%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S + IG +Y + + + Y+++ N D V + +
Sbjct: 27 GDHDTGVSPLAAIGAEYALTKNWATLVDYQWV----------NNIGDANTVGTSPDNGML 76
Query: 235 SLGINMH 241
SLG++
Sbjct: 77 SLGVSYR 83
>gi|129222|sp|P11297|OP28_NEIGO RecName: Full=Opacity protein V28; Flags: Precursor
Length = 234
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 33/121 (27%), Gaps = 32/121 (26%)
Query: 141 DSLLIYGMGGFGGAYVIDS-SLEKVESDNSKNAKGRFDGH------------------GS 181
D Y +V S K + ++ G +
Sbjct: 127 DKFKPYIGARVAYGHVRHSIDSTKKTTKFLTSSYGGLNPTVYTEENTQNAHHQSNSIRRV 186
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + G+ + + ++L A YRY + + H ASLG+
Sbjct: 187 GLGVIAGVGFDITPKLTLDAGYRYHNWGRLE-------------NTRFKTHEASLGVRYR 233
Query: 242 F 242
F
Sbjct: 234 F 234
>gi|121582773|ref|YP_973215.1| OmpW family protein [Polaromonas naphthalenivorans CJ2]
gi|120596035|gb|ABM39473.1| OmpW family protein [Polaromonas naphthalenivorans CJ2]
Length = 236
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 13/138 (9%), Positives = 39/138 (28%), Gaps = 5/138 (3%)
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVID-SSLEKVESD 167
A + ++ + V+ ++ + + Y G A+ D
Sbjct: 99 VDGAGTGAPLGSVETTKAWFPAVLATYTFAGLPGIRPYVGAGVNYAFFTDPQVSAAYTGA 158
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE---R 224
+ + V+ +G ++ + + L Y + + +
Sbjct: 159 FGGTSSSSTLKNSWGPVVKLGAEFPIAKNWVLDVGYSRYWIKTTATITTTTPGVGDIART 218
Query: 225 VDRKGNAHIASLGINMHF 242
++ K + + L + F
Sbjct: 219 INVKVDPGVFGLLVGYRF 236
>gi|296282510|ref|ZP_06860508.1| outer membrane protein [Citromicrobium bathyomarinum JL354]
Length = 222
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 49/173 (28%), Gaps = 8/173 (4%)
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDV 132
DT N + + + N +E A + + I V
Sbjct: 55 GDTQTEANDNVVPTLAVEYFVSKNFSIETICCMTQHDVDAVSGLPGAELVADAKLIPATV 114
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
K + + + Y G ++ E+ + VL G+D
Sbjct: 115 TAKGHFDLGPVKPYVGAGVTYFL--WVDVDPGEATLPLGVTETDLSNEFGFVLQAGMDVP 172
Query: 193 VNYD---ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++L A ++ + + + + + + + S G++ F
Sbjct: 173 LGDSGFGLTLDAKKYFVD---TTASWYAGDTLAIQTEHDLDPWVLSAGVSYRF 222
>gi|194099260|ref|YP_002002354.1| outer membrane protein [Neisseria gonorrhoeae NCCP11945]
gi|193934550|gb|ACF30374.1| outer membrane protein [Neisseria gonorrhoeae NCCP11945]
Length = 263
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 33/144 (22%), Gaps = 20/144 (13%)
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGD--VVLKAGYSVDSLLIYGMGGFGGA-----YVID 158
N AA K + + GY + +G
Sbjct: 133 GNGSFHAASSLGLSAVYDFKLNDKFKPYIGARVGYGHVRHQVRSVGQETITVTPKPKNGT 192
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+ + G+ V +++L A YRY
Sbjct: 193 QGGSVISTSPVPAYHENRSSRRLGFGAMAGVGIDVAPNLTLDAGYRYHYWGRLE------ 246
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 247 -------NTRFKTHEASLGVRYRF 263
>gi|87121255|ref|ZP_01077145.1| outer membrane protein OmpW, putative [Marinomonas sp. MED121]
gi|86163412|gb|EAQ64687.1| outer membrane protein OmpW, putative [Marinomonas sp. MED121]
Length = 203
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ GA + ++ + E + + + + +GLD V D ++AS+ Y+
Sbjct: 118 YVGAGLNYTTFFEEEGFGTLDGTNVELDDSFGLAVQVGLDVEVTEDWFVNASFWYMDIDT 177
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ V D + + ++ +G+ F
Sbjct: 178 EV------ETTVGTFDAEIDPYVVMVGMGYTF 203
>gi|120556596|ref|YP_960947.1| OmpA domain-containing protein [Marinobacter aquaeolei VT8]
gi|120326445|gb|ABM20760.1| OmpA domain protein transmembrane region-containing protein
[Marinobacter aquaeolei VT8]
Length = 192
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 59/202 (29%), Gaps = 33/202 (16%)
Query: 43 NVEYQDDEYGIWSGNYV-GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
V QD+ SG Y+ G + D N LL LG Q +
Sbjct: 22 AVWAQDNVSRDKSGPYISGSYGGYKAHGGEFEDE------NDLLGAALG------YQFNE 69
Query: 102 FVFGINCHT-TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
F F + K K + + + DS +Y G
Sbjct: 70 F-FALEAEYIDFGNFGDDDVEGKLKGAGL-SAIGRLPLT-DSFGVYAKAG---------- 116
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + + + +G G+D+ V ++ A Y + ++V+
Sbjct: 117 -AFASAFDVEAFDEDETYDEVNPFVGAGVDFRVTEQLTAFAEY-----NRYNVDIDEDDF 170
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+ + + + +G+ F
Sbjct: 171 NGQVTNDGPDFDTGRVGLKFQF 192
>gi|161870334|ref|YP_001599504.1| opacity protein Opa95 [Neisseria meningitidis 053442]
gi|161595887|gb|ABX73547.1| opacity protein Opa95 [Neisseria meningitidis 053442]
Length = 233
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 28/124 (22%), Gaps = 34/124 (27%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------------------- 180
D Y +V + + +K
Sbjct: 123 FDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSATKPGQIPSLVTKPAYHESHSI 182
Query: 181 --SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 183 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGV 229
Query: 239 NMHF 242
F
Sbjct: 230 RYRF 233
>gi|221069964|ref|ZP_03546069.1| OmpW family protein [Comamonas testosteroni KF-1]
gi|220714987|gb|EED70355.1| OmpW family protein [Comamonas testosteroni KF-1]
Length = 223
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 53/208 (25%), Gaps = 30/208 (14%)
Query: 60 GLHISRLYET----HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G + + L+ ++ ++ ++ G N QL + + A
Sbjct: 21 GAQSAGTWSARVGITHLSPDVSSGNLSAPSFPNTKVDAGSNTQLGGGITYMVTDNLALDV 80
Query: 116 --------DSTFYRLKEKYFIYGDVVL---------KAGYSVDSLLIYGMGGFGGAYV-- 156
D T G + + + Y G A+
Sbjct: 81 PLATPFKHDLTGAGAIAGVGKLGSTKAIPATLMLQYRFNEAKAAFRPYVGAGVTYAHFYG 140
Query: 157 --IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
++L + N + +G Y N + ASY +
Sbjct: 141 EKTTATLNGLSGGTLANPTTAELDDKFGALAQLGFVYQFNERWFVDASY-----SKSFLK 195
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
S + + + N + S+ I F
Sbjct: 196 TKIHLSSGQSISVRLNPDVFSMAIGYRF 223
>gi|240126382|ref|ZP_04739268.1| outer membrane protein [Neisseria gonorrhoeae SK-92-679]
gi|268684966|ref|ZP_06151828.1| outer membrane protein [Neisseria gonorrhoeae SK-92-679]
gi|268625250|gb|EEZ57650.1| outer membrane protein [Neisseria gonorrhoeae SK-92-679]
Length = 205
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 13/91 (14%)
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
GA +S++ + + G+ + + +++L A YRY
Sbjct: 128 AGARGAESAVRPSYKSTQDAHHQSNSIRRVGLGVIAGVGFDITPNLTLDAGYRYHNWGRL 187
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 188 E-------------NTRFKTHEASLGMRYRF 205
>gi|148359923|ref|YP_001251130.1| hypothetical protein LPC_1852 [Legionella pneumophila str. Corby]
gi|148281696|gb|ABQ55784.1| hypothetical protein LPC_1852 [Legionella pneumophila str. Corby]
Length = 249
Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 39/133 (29%), Gaps = 5/133 (3%)
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+ + + + G ++L GY V + G G D + +
Sbjct: 113 DADPQFDNYSYLYKVRNSRVAVKGKLLLDKGYWVMPW-VSASLGVGFNRAHDFTNTPLIF 171
Query: 167 DNSKNAKG-RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ N + LG G+ ++ L Y + + + +S +
Sbjct: 172 EALPNNNFEDHTKTAFTYTLGAGVQKSISEHWQLGVGYEFADWGKSELGRALGQSLNTGL 231
Query: 226 DRKGNAHIASLGI 238
H+ + G+
Sbjct: 232 AL---NHLYTNGV 241
>gi|117574272|gb|ABK41120.1| OlpA [Moraxella catarrhalis]
Length = 215
Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 56/202 (27%), Gaps = 27/202 (13%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG------INCH 109
G YV + D G GI G + L + IN
Sbjct: 26 GYYVQADLGYSNLEAKYNDNRPNDNKLEDKGLGYGISFGKDTDLARYALDYKNYGKINSS 85
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
T +T + + L A Y D++ + + +
Sbjct: 86 YTYQPQTNTSITSSGELKAQ-SLGLSAIYDFDTVSGFTPYAGARVDINQIKSTVSTVTTT 144
Query: 170 KNAKGRFD-----GHGSSVVLGIGLDYMVNYDISLSA--SYRYIPHHIHSVNNSNAKSDV 222
A+ R + + G Y +N +S+ A Y Y+ K D
Sbjct: 145 AAAQSRTTHSQKQENKVGFGVLAGAQYAINPQLSVDAGVEYNYL-----------GKYDK 193
Query: 223 ERVDRKGNAHI--ASLGINMHF 242
D K AH A +G+ +F
Sbjct: 194 LDTDSKLKAHQYGAKVGLRHNF 215
>gi|50085869|ref|YP_047379.1| hypothetical protein ACIAD2824 [Acinetobacter sp. ADP1]
gi|49531845|emb|CAG69557.1| conserved hypothetical protein; putative protein (DcaP-like)
[Acinetobacter sp. ADP1]
Length = 432
Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 38/104 (36%), Gaps = 4/104 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG-HGSSVVLGIGLDYMVNYDISL 199
D+ L + ++ D + + D S +G+G +Y + D+ +
Sbjct: 243 DNRLPSFITKLKYHFLDDKGSASIRGTAQEVRSRELDNATEFSWGIGVGTNYKITNDLEI 302
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGN---AHIASLGINM 240
+ Y ++ + +N+ + E+ N S+G++
Sbjct: 303 NVDYSHVKGDSTLLLYTNSAYNSEQNQNDINLNEFDAFSIGLSY 346
>gi|189475078|gb|ACE00213.1| OmpA [Vibrio alginolyticus]
Length = 320
Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 23/187 (12%), Positives = 57/187 (30%), Gaps = 44/187 (23%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + D + LG +G+ + + F + +
Sbjct: 23 YVGGKMGKSW----MEDACVAGQACDKDDSTLGAFVGYEM---NKYFAVEA---GFDNIG 72
Query: 118 TFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
F + + + K + + + +YG G
Sbjct: 73 DFNQTSFSGHVEAITLAPKFSLPITEDIALYGKVGGAYVMFDG----------------- 115
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
S + GL++ ++ +++ A Y+ +D+ + + A+
Sbjct: 116 --KDDYSYLGAAGLEFNLSQNVTARAEYQ-------------TLTDISNDVTRATGNTAT 160
Query: 236 LGINMHF 242
LG++ F
Sbjct: 161 LGVSFKF 167
>gi|261251362|ref|ZP_05943936.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
gi|260938235|gb|EEX94223.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
Length = 329
Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 47/156 (30%), Gaps = 21/156 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA- 113
+ Y GL + L+ IN++ + + LG N + + + +
Sbjct: 23 TDFYTGLGLG----MSNLSPDINQQEQDDQRKFAGTLFLGKN--IGSY-TALEGSYSYLS 75
Query: 114 --KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ ++ + Y + LL + + ++++ +
Sbjct: 76 SYDLNDNDGAVEYQN-----------YGLSGLLYWPSSSSEWSVYGKLGANYLDANFQGS 124
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
A H S G+G+ + +N + Y
Sbjct: 125 AANLNVEHKVSFASGLGIRWNLNENWFARLEYNLYD 160
>gi|239503642|ref|ZP_04662952.1| putative porin precurseur in catabolism of dicarboxylic acids
[Acinetobacter baumannii AB900]
Length = 438
Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 18/140 (12%)
Query: 121 RLKEKYFIYGDVVLKAGYSVDS--LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
R K D+ + Y+ G + ++L + +
Sbjct: 220 RYDWKIDANNDLKVALEYTGSRVSAFPTLTGRYTFKQGPLTALAQGFINEKSTDVATATV 279
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYI-----------PHHIHSVNNSNAKSDVERVDR 227
S G GL Y + S+ A+Y+YI + + + NA D +
Sbjct: 280 KKVSWGAGGGLKYQLTPQQSVQANYQYIVGDQKFMPYTTQSGLANSTSLNAAGDFSLSED 339
Query: 228 KGN-----AHIASLGINMHF 242
K + + ++G + F
Sbjct: 340 KTDLVMNKLNSINIGYSYKF 359
>gi|77919972|ref|YP_357787.1| putative outer membrane protein [Pelobacter carbinolicus DSM 2380]
gi|77546055|gb|ABA89617.1| putative outer membrane protein [Pelobacter carbinolicus DSM 2380]
Length = 208
Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 9/92 (9%), Positives = 24/92 (26%), Gaps = 4/92 (4%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G V +G D + ++ + Y+ +
Sbjct: 121 YVGVGVDWVYAWDETVVVGGQRYSLDIEDSFGWAAKVGADIKITENLYANVDVMYLDNET 180
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N+ + ++ D ++G+ F
Sbjct: 181 EV----NSSAGLDGTDLDLKVWSYNIGMKYRF 208
>gi|46206173|ref|ZP_00047624.2| COG3637: Opacity protein and related surface antigens
[Magnetospirillum magnetotacticum MS-1]
Length = 281
Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 27/117 (23%), Gaps = 15/117 (12%)
Query: 139 SVDSLLIYGMGGFGGAY-------------VIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
+ Y G G A + + L
Sbjct: 152 TWYGFTPYVGAGIGFADKRMSRNYTQTTCLTDGCDGLDGTGPREPAFRANHSVATFAWAL 211
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL Y + +SL A+YRYI D + +G+ F
Sbjct: 212 TAGLSYEIGAGLSLDAAYRYIDLGRAKSGVDLYGGSTRLKDLAASE--FRVGLRYRF 266
>gi|163750419|ref|ZP_02157659.1| outer membrane protein OmpW, putative [Shewanella benthica KT99]
gi|161329909|gb|EDQ00895.1| outer membrane protein OmpW, putative [Shewanella benthica KT99]
Length = 145
Score = 39.8 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G++ L Y GG D+ + G+ + +G+DY VN
Sbjct: 44 FGHAESKLRPYIGGGVNFTNFYDNEFTNDLDGALSDLSM---GNSWGLAAQVGIDYQVNK 100
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ ++AS Y N D ++ S+G
Sbjct: 101 NWLVNASIWYAQISTEVKFNLGGSPTTIETDIDPWVYMVSVG 142
>gi|260555399|ref|ZP_05827620.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
gi|260411941|gb|EEX05238.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
Length = 428
Score = 39.8 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 2/94 (2%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G + + + K + +G+G Y + D L A Y ++
Sbjct: 253 VGRLNHKFAHGSMLSGRSFVAEKRTNHDSEWAWGVGLGGKYQITPDTLLKADYYHVKGDG 312
Query: 211 HSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ SN+ ++ + SLGI F
Sbjct: 313 RFLLWSNSGYAIDDQNNIHSNEFDTVSLGITHQF 346
>gi|300774636|ref|ZP_07084499.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
gi|300506451|gb|EFK37586.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
Length = 207
Score = 39.8 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 51/189 (26%), Gaps = 28/189 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH--NIQLEDFVFGINCHTTAAK 114
++G+ + ++ K G G + G + L K
Sbjct: 39 FHIGVKGGANFTKISTESSLEGK-------YGFGYQAGVMTRVDLGKLYVQGEALFNKRK 91
Query: 115 DD-STFYRLKEKYFIYG-DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK-VESDNSKN 171
+ K D+ + GY + + F G + K S +
Sbjct: 92 TSFQSQDGGSSKLSWNAIDIPVVVGYKFIKTEDFNVRAFAGGVYSYAFNNKLSASQALQE 151
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+FD + GIG+DY + ++ Y + K
Sbjct: 152 GFKKFDKSNIGITGGIGVDYK---NFTIDLRYE-------------TGLTSISKEFKSKP 195
Query: 232 HIASLGINM 240
H SLGI
Sbjct: 196 HSFSLGIGY 204
>gi|187930312|ref|YP_001900799.1| OmpW family protein [Ralstonia pickettii 12J]
gi|187727202|gb|ACD28367.1| OmpW family protein [Ralstonia pickettii 12J]
Length = 224
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 25/101 (24%), Gaps = 10/101 (9%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G + + V+ + L +G DY + +
Sbjct: 134 RFKPYVGAGVNYTRISN-----VDLQVPGVGSLDLSKNSFGPALQVGFDYRLTERL---- 184
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + ++ K + + +G+ F
Sbjct: 185 -YFNVDLKKTWISADVKMGGQTISKVKVDPWLLGVGLGYRF 224
>gi|56459276|ref|YP_154557.1| Outer membrane protein OmpW, putative [Idiomarina loihiensis L2TR]
gi|56178286|gb|AAV81008.1| Outer membrane protein OmpW, putative [Idiomarina loihiensis L2TR]
Length = 232
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 29/106 (27%), Gaps = 9/106 (8%)
Query: 145 IYGMGGF---GGAYVIDSSLEKVESDNSKNAKGRFD-----GHGSSVVLGIGLDYMVNYD 196
+ G + + D + L G++ ++ +
Sbjct: 128 PFVGIGVNYTAFFDEQVDPQLRSTLGDLGVVTDNDDVSLALKNSWGYALQAGVNVDLSEN 187
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L + N + +E VD + ++A G+ +F
Sbjct: 188 WGLHFMVSRMDIDTTGDVRVNGNT-IESVDVDIDPYVAMAGVRYNF 232
>gi|309378322|emb|CBX23068.1| opacity protein [Neisseria lactamica Y92-1009]
Length = 249
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 50/228 (21%), Gaps = 54/228 (23%)
Query: 56 GNYVGLHISRLYETHPLADTIN----RKTYNSLLPNGLGIELGHNIQLEDFVFGINCH-- 109
G YV ++ YE + Y + L ++ ++
Sbjct: 35 GPYVQADLNYAYEHITHDYPADNAKVFDDYRDIKTRSTHPRLSVGYDFGNWRIALDYARY 94
Query: 110 --------TTAAKDDSTFYRLKEKY----FIYGDVVLKAGYSVD---------SLLIYGM 148
A + K G ++ Y + Y
Sbjct: 95 NKWKHGKHIHAENTKKVKNGTEVKTIADHTDKGTFKAESNYGISAIYDFDTGTRFKPYAG 154
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDG--------------HGSSVVLGIGLDYMVN 194
G + S + + + G G+ +
Sbjct: 155 VRVGLGKIRHSIAVEDKGEIIIANISATGGLKDAHPPVHESHSIRRVGFGAVAGVGIDIT 214
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++L YRY + + H ASLG+ F
Sbjct: 215 PNLTLDTGYRYHYWGHLE-------------NTRFKTHEASLGVRYRF 249
>gi|224540351|ref|ZP_03680890.1| hypothetical protein BACCELL_05264 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518042|gb|EEF87147.1| hypothetical protein BACCELL_05264 [Bacteroides cellulosilyticus
DSM 14838]
Length = 1121
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 22/177 (12%), Positives = 51/177 (28%), Gaps = 6/177 (3%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIE----LGHNIQLEDFVFGINCHTTAAKDDST 118
+ + + R Y+ LG Q ++ +G + A
Sbjct: 677 VGGNDTRTRMVSYLTRLNYDYKNKYYLGGSFRTDGSSRFQRDN-RWGSFWSISGAWRIIE 735
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+ D+ ++A Y V+ L G+ G + + + +
Sbjct: 736 EEFMSPTKDWLTDLKIRASYGVNGTLPSDYFGYMGLSSLTNGYLEQPGIIQSQLRNDDLQ 795
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
++ L +GLD+ + I+++ Y Y + + + N
Sbjct: 796 WETNYNLNLGLDFALWNRINVTLEY-YTRTTKNLLMDRPISMTTGFSSYLMNIGEVK 851
>gi|170731734|ref|YP_001763681.1| OmpW family protein [Burkholderia cenocepacia MC0-3]
gi|254246553|ref|ZP_04939874.1| Outer membrane protein W [Burkholderia cenocepacia PC184]
gi|124871329|gb|EAY63045.1| Outer membrane protein W [Burkholderia cenocepacia PC184]
gi|169814976|gb|ACA89559.1| OmpW family protein [Burkholderia cenocepacia MC0-3]
Length = 243
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 55/190 (28%), Gaps = 15/190 (7%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTFYRL 122
P+ +I + LG+ G+ + + V GI T F L
Sbjct: 54 GGTPINQSIPNTGAGINDADTLGLAAGYFVTDHISTELVMGIPPKFDITGKGQFDRFGVL 113
Query: 123 KEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGRFDG 178
Y V+L+ + + Y G + + E+
Sbjct: 114 GRAYQWSPAVLLRYHFNDANAKFRPYVGVGATYVWFTGAKITNSAFENGVLGGPTSATTS 173
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS--- 235
+ + VL G Y S YIP + + + ++ V + AHI+
Sbjct: 174 NQWAPVLNAGFTYNFTKHWFAGLSLSYIPVSVTATFTTARRTPVGTLTETSKAHISLNPI 233
Query: 236 ---LGINMHF 242
L + F
Sbjct: 234 VTYLNLGYRF 243
>gi|229528281|ref|ZP_04417672.1| outer membrane protein W precursor [Vibrio cholerae 12129(1)]
gi|254224797|ref|ZP_04918413.1| outer membrane protein OmpW [Vibrio cholerae V51]
gi|125622860|gb|EAZ51178.1| outer membrane protein OmpW [Vibrio cholerae V51]
gi|229334643|gb|EEO00129.1| outer membrane protein W precursor [Vibrio cholerae 12129(1)]
Length = 217
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S ++N + D + +G DYM+N
Sbjct: 115 FGEANSTFRPYVGAGLNYTTFFDESFNSTGTNNELSDLKLDDSW--GLAANVGFDYMLND 172
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + A D + D + N + + F
Sbjct: 173 SWFLNASVWYANIETTATYKAGA--DAKSTDVEINPWVFMIAGGYKF 217
>gi|85715278|ref|ZP_01046261.1| hypothetical protein NB311A_05258 [Nitrobacter sp. Nb-311A]
gi|85697924|gb|EAQ35798.1| hypothetical protein NB311A_05258 [Nitrobacter sp. Nb-311A]
Length = 283
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 58/229 (25%), Gaps = 44/229 (19%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYN--------SLLPNGLGIEL-GHNIQLEDFVFG- 105
G Y+ I + + + N + + GI G Q ++ G
Sbjct: 42 GWYLRGDIG--FSNQRVNNIAMADGRNAQLLSLQQTTAFDAAGIYGVGIGYQFNNWFRGD 99
Query: 106 ----INCHTTAAKDDSTFYRL-------------KEKYFIYGDVVLKAGY-SVDSLLIYG 147
++ D Y K + + +
Sbjct: 100 FIGQYRGNSNFKGTDLLTYPAGGGIVGNGINNYNATKSEWLAMANGYVDLGTWWGVTPFI 159
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRF----------DGHGSSVVLGIGLDYMVNYDI 197
G G A V ++ N+ + L GL YMVN +
Sbjct: 160 GAGVGAARVTIANYTDTGMVNNNGFGFGAFPSFANAPAASRWNFAWALHGGLAYMVNPGL 219
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVD----RKGNAHIASLGINMHF 242
++ +Y Y+ + + R +H LG+ +F
Sbjct: 220 TVELAYSYVNLGSGMTGAVSDYTGFTRGVPMQFNDITSHDVKLGVRWYF 268
>gi|299770616|ref|YP_003732642.1| putative porin precurseur in catabolism of dicarboxylic acids
[Acinetobacter sp. DR1]
gi|298700704|gb|ADI91269.1| putative porin precurseur in catabolism of dicarboxylic acids
[Acinetobacter sp. DR1]
Length = 438
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 43/140 (30%), Gaps = 18/140 (12%)
Query: 121 RLKEKYFIYGDVVLKAGYSVDS--LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
R K D+ + Y+ G + ++L + +
Sbjct: 220 RYDWKIDANNDLKVALEYTGSRVSAFPTLTGRYSFKQGPLTALAQGFINEKSADVATATV 279
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYI-----------PHHIHSVNNSNAKSDVERVDR 227
S G GL Y + S+ A+Y+YI + + N NA D +
Sbjct: 280 KKVSWGAGGGLKYQLTPQQSVQANYQYIVGDQKFMPYTTQSGLANSTNLNAAGDFSLNED 339
Query: 228 KGN-----AHIASLGINMHF 242
K + + ++G + F
Sbjct: 340 KTDLVMNKLNSINIGYSYKF 359
>gi|220924418|ref|YP_002499720.1| porin [Methylobacterium nodulans ORS 2060]
gi|219949025|gb|ACL59417.1| porin [Methylobacterium nodulans ORS 2060]
Length = 316
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 23/89 (25%), Gaps = 3/89 (3%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + S + L GL Y V + L +YRY+
Sbjct: 202 NVGTDVYSQGGVSGGIYKSRTTTSLAWALHAGLSYAVTPGLKLELAYRYMNLGEARTGVL 261
Query: 217 NAKSDVERVDR---KGNAHIASLGINMHF 242
N +H LG+ F
Sbjct: 262 NCFCGASYAPIKIKDIESHDIKLGMRWMF 290
>gi|312113344|ref|YP_004010940.1| OmpW family protein [Rhodomicrobium vannielii ATCC 17100]
gi|311218473|gb|ADP69841.1| OmpW family protein [Rhodomicrobium vannielii ATCC 17100]
Length = 243
Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 1/90 (1%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ D K + L G DY + + L+ ++Y+
Sbjct: 147 YIGAGVNYTVFFGVDEGSAFKKVKFDNNWGFALQAGFDYKLAGNWFLNFDFKYL-FLDTD 205
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V + + V R + I GI F
Sbjct: 206 VTATLQNNAVVRTKADIDPIIVGAGIGYKF 235
>gi|37624568|gb|AAQ96080.1| outer membrane protein II [Hafnia alvei]
Length = 162
Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + +K + G S + IG++Y +N D + Y+++ + D
Sbjct: 17 DGSANSATKGRYIHSNDTGVSPLAAIGVEYALNKDWATRLDYQFV----------SNIGD 66
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + + S+G+ F
Sbjct: 67 ANETAARPHNTLLSVGVTYRF 87
>gi|2367651|gb|AAC46156.1| opacity protein [Neisseria meningitidis]
Length = 241
Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 26/125 (20%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV--------------- 184
D Y +V D +
Sbjct: 130 FDKFKPYIGARVAYGHVKHQVHSVETKTTIYTTAPTGDATVGGTIPERPSSKPAYHESNS 189
Query: 185 -------LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ G+ + + ++L YRY + + H SLG
Sbjct: 190 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 236
Query: 238 INMHF 242
+ HF
Sbjct: 237 MRYHF 241
>gi|325920948|ref|ZP_08182837.1| putative autotransporter protein [Xanthomonas gardneri ATCC 19865]
gi|325548568|gb|EGD19533.1| putative autotransporter protein [Xanthomonas gardneri ATCC 19865]
Length = 197
Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 46/166 (27%), Gaps = 4/166 (2%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ--LEDFVFGINCHTTAAKDDST 118
S + + T + G + G+ G +
Sbjct: 28 GDGSGWFVNGGVGRTSLKSGPYDGSDTGYNVSAGYRWNVLFPWLSIGPEAGYNDLGNIQA 87
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS-SLEKVESDNSKNAKGRFD 177
+ + L+ G++V + +G A + K + + R D
Sbjct: 88 KNLFNGDAVVEDESQLR-GWTVGVNQRFALGDKWYASMRGGLYGWKGQGLRNDTVSDRAD 146
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
S G G+ Y + S+ A+Y + V+ S + V
Sbjct: 147 LDKLSWYAGAGVGYNLGEHFSIGANYDHYNAKKFEVDLSTDMASVN 192
>gi|417408|sp|Q04883|OPAD_NEIGO RecName: Full=Opacity protein opA59; Flags: Precursor
gi|940800|emb|CAA79371.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 243
Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 15/71 (21%)
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G V G+G+D + +++L A YRY + +
Sbjct: 188 ESRSISSLGFGAVAGVGID--ITPNLTLDAGYRYHNWGRLE-------------NTRFKT 232
Query: 232 HIASLGINMHF 242
H ASLG+ F
Sbjct: 233 HEASLGVRYRF 243
>gi|121726468|ref|ZP_01679732.1| outer membrane protein OmpW [Vibrio cholerae V52]
gi|147672252|ref|YP_001215211.1| outer membrane protein W [Vibrio cholerae O395]
gi|153800472|ref|ZP_01955058.1| outer membrane protein OmpW [Vibrio cholerae MZO-3]
gi|153825410|ref|ZP_01978077.1| outer membrane protein W [Vibrio cholerae MZO-2]
gi|229514290|ref|ZP_04403751.1| outer membrane protein W precursor [Vibrio cholerae TMA 21]
gi|262169136|ref|ZP_06036829.1| outer membrane protein W precursor [Vibrio cholerae RC27]
gi|121631063|gb|EAX63440.1| outer membrane protein OmpW [Vibrio cholerae V52]
gi|124123916|gb|EAY42659.1| outer membrane protein OmpW [Vibrio cholerae MZO-3]
gi|146314635|gb|ABQ19175.1| outer membrane protein OmpW [Vibrio cholerae O395]
gi|149740956|gb|EDM55033.1| outer membrane protein W [Vibrio cholerae MZO-2]
gi|227015514|gb|ACP11723.1| outer membrane protein OmpW [Vibrio cholerae O395]
gi|229348270|gb|EEO13228.1| outer membrane protein W precursor [Vibrio cholerae TMA 21]
gi|262022417|gb|EEY41125.1| outer membrane protein W precursor [Vibrio cholerae RC27]
Length = 217
Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S ++N+ + D + +G DYM+N
Sbjct: 115 FGEANSTFRPYVGAGLNYTTFFDESFNSTGTNNALSDLKLDDSW--GLAANVGFDYMLND 172
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + A D + D + N + + F
Sbjct: 173 SWFLNASVWYANIETTATYKAGA--DAKSTDVEINPWVFMIAGGYKF 217
>gi|119468232|ref|ZP_01611358.1| putative outer membrane protein; signal peptide [Alteromonadales
bacterium TW-7]
gi|119448225|gb|EAW29489.1| putative outer membrane protein; signal peptide [Alteromonadales
bacterium TW-7]
Length = 351
Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 42/188 (22%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN-CHTTAAK 114
G Y+G + N G G+E G+ + + +
Sbjct: 27 GFYIGAFGDYYDASWENMSAQAGLDVN--ESTGFGLEAGYRF-SDFWSARLEYADLDFNA 83
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D + I G + G L + GG V S++ V+ + NA
Sbjct: 84 FDKAAGN---RNNIDGS---RFGID---ALYHLDGGPFYGLVGIKSMDVVDDNTFLNA-- 132
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+G + + ++ + + + +D+ A
Sbjct: 133 -----------GVGYRHFITDNLFANVE----------------TAVYQGIDKGYTDVGA 165
Query: 235 SLGINMHF 242
LGIN F
Sbjct: 166 KLGINYFF 173
>gi|293398403|ref|ZP_06642583.1| opacity protein V28 [Neisseria gonorrhoeae F62]
gi|291611180|gb|EFF40275.1| opacity protein V28 [Neisseria gonorrhoeae F62]
Length = 240
Score = 39.8 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 29/120 (24%), Gaps = 31/120 (25%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH------------------GSS 182
D Y +V S + + +
Sbjct: 134 DKFKPYIGARVAYGHVRHSIDSTKKETTFLTSFYGVNPTVYTEKNTQNAHHQSDSIRRVG 193
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ G+ + + ++L A YRY + + H ASLG+ F
Sbjct: 194 LGAVAGVGFDITPKLTLDAGYRYHNWGRLE-------------NTRFKTHEASLGVRYRF 240
>gi|254435640|ref|ZP_05049147.1| hypothetical protein NOC27_2703 [Nitrosococcus oceani AFC27]
gi|207088751|gb|EDZ66023.1| hypothetical protein NOC27_2703 [Nitrosococcus oceani AFC27]
Length = 414
Score = 39.8 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 31/108 (28%), Gaps = 11/108 (10%)
Query: 104 FGINCHTTAAKDD-----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+GI K + G + + D L+ Y +
Sbjct: 79 WGIEFAYDYIKTNLLQTSGKKAGDYATTTWLGQLRFRYPLLQDRLVPYLLA-----GGGI 133
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
E ++ G D V+G G +Y + +I+L +Y
Sbjct: 134 GIGEFSGREDFSFTGGGSDTVPLG-VVGGGAEYFITDNIALGVEAKYY 180
Score = 39.4 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 18/191 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD- 115
Y+ L + T A +++S +G N + +G+ +
Sbjct: 236 GYLSLRGGVAFLTDRNAVP--EASFDSTSGPWPSGSIGMNF---NKHWGVELAGDYGRTQ 290
Query: 116 --DSTFYRLKEKYFIYGDVVLKAGYSV--DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
++ + + Y + D L Y + G G + ++ S +
Sbjct: 291 LRSPVLGKITGYPIWTISALGRFRYPLLNDKLSPYLLAGPGLGFAEIGDPDQPLSVTGLS 350
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G G+DY + Y+++ + + + N+ K + +
Sbjct: 351 GGQDNSIVA---IFGAGVDYFIGYNVAFNLEVK-----RAAFFNTQVKINGQSETLSPEF 402
Query: 232 HIASLGINMHF 242
+ GI + F
Sbjct: 403 VSLTAGIRVFF 413
>gi|153217566|ref|ZP_01951247.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124113488|gb|EAY32308.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 317
Score = 39.8 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 34/147 (23%), Gaps = 12/147 (8%)
Query: 99 LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD---VVLKAGYSVDSLLIYGMGGFGGAY 155
++ G+ + ++ + + YS D G A
Sbjct: 180 FGNWELGVELYYQIKDNEDRQANGGINEISDFNEKYIEPIVQYSFDD------AGVLYAR 233
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
V E + NS D +G + V L Y Y
Sbjct: 234 VRVGKNETNNAANSGGGNANVDYFKDIRKATLGYEQAVGDSWLLKGEYEYANEVEEKSKL 293
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ E + H F
Sbjct: 294 AGWEAKNES---ELKQHTVYFQALYRF 317
>gi|325205509|gb|ADZ00962.1| opacity protein [Neisseria meningitidis M04-240196]
Length = 265
Score = 39.8 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 28/124 (22%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V + +K ++
Sbjct: 155 DKFKPYIGARVAYGHVKHQVHSVETKTTTVTSKPTATSPQGGPIIQTDPSKPPYHESHSI 214
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H SLG+
Sbjct: 215 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 261
Query: 239 NMHF 242
HF
Sbjct: 262 RYHF 265
>gi|209964907|ref|YP_002297822.1| outer membrane protein OmpW, putative [Rhodospirillum centenum SW]
gi|209958373|gb|ACI99009.1| outer membrane protein OmpW, putative [Rhodospirillum centenum SW]
Length = 217
Score = 39.8 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + D +D + L G+D+ +N SL+ + +
Sbjct: 130 YIGLGVNYTIFYNVDEGAARDIDYD-NSFGFALQAGVDFALNERWSLNLDVKKLWLST-D 187
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V+ + D + I +G F
Sbjct: 188 VSIDAGLPSRIKADVDLDPWIIGVGFGYRF 217
>gi|54309975|ref|YP_130995.1| hypothetical protein PBPRA2821 [Photobacterium profundum SS9]
gi|46914414|emb|CAG21193.1| hypothetical protein PBPRA2821 [Photobacterium profundum SS9]
Length = 319
Score = 39.8 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 65/237 (27%), Gaps = 54/237 (22%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
+L V ++ + + A+ AD+ V + +G ++G
Sbjct: 2 KSLSLSVLAALSLGVATQAM-------------ADDAVVNDATQSVDKAGFWIGA--GMG 46
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
D N + +E G++ G+ D
Sbjct: 47 MGIVDSNDLSNLNGAGTGEAFSSKLEAGYDFNKN---VGLYTSYDYMHDLGNADLH---- 99
Query: 127 FIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
G + +K Y L ++G G + A+G D +
Sbjct: 100 --LGTLGVKGNYYFTQDLSVFGKLGATYIF----------------AEGEIDDSFTG-TA 140
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+GL+Y + +S Y Y ++ + + H G+ F
Sbjct: 141 GVGLEYQLTNAVSTKIGYDYY------------QNLELSQGQDTDLHQVYWGMTYKF 185
>gi|261211923|ref|ZP_05926209.1| long-chain fatty acid transport protein [Vibrio sp. RC341]
gi|260838531|gb|EEX65182.1| long-chain fatty acid transport protein [Vibrio sp. RC341]
Length = 422
Score = 39.8 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 26/96 (27%), Gaps = 8/96 (8%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y + G ++ ++ + IG Y +N D +L A Y Y
Sbjct: 278 YSVQWIGWNSFDQIEFRNLQGSPLGSSYDKPYKWQDGWHYAIGGTYFLNNDWTLRAGYMY 337
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ S S + S G H
Sbjct: 338 --------DTSAQDSLTSISVPDSDRQWVSAGFTYH 365
>gi|254514087|ref|ZP_05126148.1| OmpW family protein [gamma proteobacterium NOR5-3]
gi|219676330|gb|EED32695.1| OmpW family protein [gamma proteobacterium NOR5-3]
Length = 234
Score = 39.8 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 8/111 (7%)
Query: 140 VDSLLIYGMGGFGGAYV----IDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVN 194
++ Y G +DS L V D + + G+D +N
Sbjct: 124 MEGWQPYLGLGVNYTTFFSEKVDSELGAVLGDLLDVTSAKLSLDDSVGLAAQAGVDIPLN 183
Query: 195 YDISLSASYRYIPHHIHS---VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + YI + V + + D + + ++G+ F
Sbjct: 184 DKWAFNLGVWYIDIGTTADIDVTTGSGANATVSFDVDIDPWVYNVGVAYKF 234
>gi|187925565|ref|YP_001897207.1| OmpW family protein [Burkholderia phytofirmans PsJN]
gi|187716759|gb|ACD17983.1| OmpW family protein [Burkholderia phytofirmans PsJN]
Length = 241
Score = 39.8 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 53/191 (27%), Gaps = 17/191 (8%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTFYRL 122
P T + +G G+ + +FV G+ + + F +L
Sbjct: 52 GGSPTNITEANTGAKLDSADTIGFTAGYFVTDHIATEFVIGVPPKFDLEGSGSLAQFGKL 111
Query: 123 KEKYFIYGDVVLKAGY-----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ ++ K + + L G+ ++ E++
Sbjct: 112 GQAKQWSPTLLFKYYFNAPTAAFRPYLGIGVSRVSFTDEKITNSAF-EANVLHGPTTVTT 170
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR------KGNA 231
V G Y S Y+P + N+ A + V ++ K N
Sbjct: 171 DSSWEPVFNAGFTYAFTQHWFAGVSISYLPLSTTAKLNTAANTPVGTLNVQSETKIKLNP 230
Query: 232 HIASLGINMHF 242
+ + I F
Sbjct: 231 IVTYVNIGYRF 241
>gi|103487471|ref|YP_617032.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98977548|gb|ABF53699.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 373
Score = 39.8 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 22/205 (10%), Positives = 54/205 (26%), Gaps = 26/205 (12%)
Query: 57 NYVGLHISRL---YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
YVG+ + + N + + +G++ F + A
Sbjct: 26 WYVGVGAGAMLVEDIDLDIGTFNNAGSLDHRAGYDFEGTVGYD--FGGFRAEVEVGFREA 83
Query: 114 K--------------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG-GFGGAYVID 158
+ GD + V+ +L +G G G
Sbjct: 84 DIKSGRFGNPGIPQTASGAGTLFTGSTDLNGDSNA-LSFMVNGMLDFGDDDGLQGFVGGG 142
Query: 159 SSLEKVESDNS-KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + +V + G + G+ ++ + + YR+ + +
Sbjct: 143 AGVARVSVEPVFAGPFLDDSDTGFAWQAIAGVRAPLSSNWDVGLKYRFFNADNVDLVDQA 202
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
+ V + +H + +F
Sbjct: 203 GR----DVSTRFRSHSILGTLTYNF 223
>gi|212636483|ref|YP_002313008.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212557967|gb|ACJ30421.1| OmpA [Shewanella piezotolerans WP3]
Length = 364
Score = 39.8 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 54/178 (30%), Gaps = 10/178 (5%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + P D KT P + G+ + FG+ D
Sbjct: 28 WYVGGGVG-INNYEPNCDQKTMKTCGDDDPYAWDVFAGYLF---NDYFGVELGYR----D 79
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ DV + G ++ + + +L + S+N +
Sbjct: 80 LGRAEWVDYSDKLNDVGAR-GMNLGLVAFWPFANRWSLSAEAGALNYLISNNKNYGSEYY 138
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G + +G G+ Y + ++ L A Y RY +S+ ++
Sbjct: 139 SDSGVAPYIGAGIGYNITDNLKLQAKYRRYENLDEDKWKTLEMESNYWGLELSYRFGS 196
>gi|325134556|gb|EGC57200.1| opacity protein [Neisseria meningitidis M13399]
Length = 230
Score = 39.4 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 28/125 (22%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG------------- 186
D Y +V + + +K ++
Sbjct: 119 FDKFKPYIGARVAYGHVKHQVHSVRKETTTTFSKAGAGATEPGKIISGPISKPAYHESHS 178
Query: 187 ---------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G+ + + ++L YRY + + H SLG
Sbjct: 179 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 225
Query: 238 INMHF 242
+ F
Sbjct: 226 VRYRF 230
>gi|53715052|ref|YP_101044.1| putative outer membrane protein [Bacteroides fragilis YCH46]
gi|52217917|dbj|BAD50510.1| putative outer membrane protein [Bacteroides fragilis YCH46]
Length = 442
Score = 39.4 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 30/104 (28%), Gaps = 22/104 (21%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
A+ F++F + + E V+ Y W Y G
Sbjct: 14 RAILFLLFSPLFGTGFAQT-------------ETPVKVDKPLKSYSHW---YFGAEYGVP 57
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
+ D + + + + G G+ Q+ ++ GI
Sbjct: 58 F---LFGDFTSFSADKTYVGSQFGGFAGY--QVNSWI-GIEASA 95
>gi|161870634|ref|YP_001599807.1| opacity protein [Neisseria meningitidis 053442]
gi|161596187|gb|ABX73847.1| opacity protein [Neisseria meningitidis 053442]
Length = 273
Score = 39.4 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 28/124 (22%), Gaps = 34/124 (27%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------------------- 180
D Y +V + + +K
Sbjct: 163 FDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSATKPGQIPSLVTKPAYHESHSI 222
Query: 181 --SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 223 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGV 269
Query: 239 NMHF 242
F
Sbjct: 270 RYRF 273
>gi|300690212|ref|YP_003751207.1| outer membrane protein W precursor (ompW) [Ralstonia solanacearum
PSI07]
gi|299077272|emb|CBJ49898.1| putative outer membrane protein W precursor (ompW) [Ralstonia
solanacearum PSI07]
Length = 224
Score = 39.4 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 24/101 (23%), Gaps = 10/101 (9%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G + V+ + L G DY + +
Sbjct: 134 RFKPYLGAGINYTRI-----SSVDLQVPGVGPLDLSRNSFGPALQAGFDYRLTDRL---- 184
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + ++ + + + + +G+ F
Sbjct: 185 -YFNVDIKKTWISADVKLAGQTISKVRVDPWLVGVGLGYRF 224
>gi|292488399|ref|YP_003531281.1| outer membrane protein W [Erwinia amylovora CFBP1430]
gi|292899594|ref|YP_003538963.1| outer membrane protein W [Erwinia amylovora ATCC 49946]
gi|291199442|emb|CBJ46559.1| outer membrane protein W [Erwinia amylovora ATCC 49946]
gi|291553828|emb|CBA20873.1| Outer membrane protein W precursor [Erwinia amylovora CFBP1430]
gi|312172542|emb|CBX80798.1| Outer membrane protein W precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 210
Score = 39.4 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 4/101 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G + + D + + + +GLDY + + L+A
Sbjct: 114 KWQPYAGIGVNYTLFYHADFNQTGRDAGLSDLSVKNSW--GMAGQVGLDYQLTPEWMLNA 171
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S Y+ N+ + +D + + + +G F
Sbjct: 172 SVWYMDIDTKVSFNAGE--TRQSIDTRIDPWVFFIGAGYRF 210
>gi|282855735|ref|ZP_06265042.1| outer membrane transport protein, OMPP1/FadL/TodX family
[Pyramidobacter piscolens W5455]
gi|282586467|gb|EFB91728.1| outer membrane transport protein, OMPP1/FadL/TodX family
[Pyramidobacter piscolens W5455]
Length = 415
Score = 39.4 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 19/183 (10%), Positives = 47/183 (25%), Gaps = 25/183 (13%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGI--ELGHNIQLEDFVFG-----------I 106
G + + + +T L + G+ +G N Q + +
Sbjct: 167 GAELMYAGLKLDKSTRLGGETPIDLDGDSWGVGWNVGLNWQATPRLSLAALYRSEVKQTV 226
Query: 107 NCHTTAAK--DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLI-YGMGGFGGAYVIDSSLE 162
+ R K + GY D + + + D +++
Sbjct: 227 EGDVNLYSGMLGTISTRGKGAIHLPESYTFGVGYRFSDRTRVEFNAIKTMWSSYKDLTID 286
Query: 163 KVESDNSKNAKGRFD--------GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ G G+++ +N ++ A + Y +
Sbjct: 287 VAVPQPYQAMFGGLTAYPYNEPKNWRDGWRYQFGVEHKINDKWTIRAGFVYDDCSSRDPD 346
Query: 215 NSN 217
N++
Sbjct: 347 NAD 349
>gi|330874071|gb|EGH08220.1| outer membrane protein W [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 251
Score = 39.4 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 2/91 (2%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G D+ L D + D + +G+DYM+ ++ ++A
Sbjct: 128 KFQPYAGVGINYTTFFDTDLTGNRKDQGFSNLKLKDS--VGLAAQLGMDYMITDNVLVNA 185
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
S Y+ + + + V + +
Sbjct: 186 SVWYVDIDTKATVDGPSALAVGKTKVDVDID 216
>gi|107024251|ref|YP_622578.1| OmpW [Burkholderia cenocepacia AU 1054]
gi|116688424|ref|YP_834047.1| OmpW family protein [Burkholderia cenocepacia HI2424]
gi|105894440|gb|ABF77605.1| OmpW [Burkholderia cenocepacia AU 1054]
gi|116646513|gb|ABK07154.1| OmpW family protein [Burkholderia cenocepacia HI2424]
Length = 243
Score = 39.4 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 55/190 (28%), Gaps = 15/190 (7%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTFYRL 122
P+ +I + LG+ G+ + + V GI T F L
Sbjct: 54 GGTPINQSIPNTGAGINDADTLGLAAGYFVTDHISTELVMGIPPKFDITGKGQFDRFGVL 113
Query: 123 KEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGRFDG 178
Y V+L+ + + Y G + + E+
Sbjct: 114 GRAYQWSPAVLLRYHFNDANAKFRPYVGVGATYVWFTGAKITNSAFENGVLGGPTSATTS 173
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS--- 235
+ + VL G Y S YIP + + + ++ V + AHI+
Sbjct: 174 NQWAPVLNAGFTYNFTKHWFAGLSLSYIPVSVTATFTTARRTPVGTLTETSKAHISLNPI 233
Query: 236 ---LGINMHF 242
L + F
Sbjct: 234 VTYLNLGYRF 243
>gi|325132371|gb|EGC55064.1| opacity protein [Neisseria meningitidis M6190]
gi|325138448|gb|EGC61014.1| opacity protein [Neisseria meningitidis ES14902]
Length = 157
Score = 39.4 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 27/124 (21%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V + +K ++
Sbjct: 47 DKFKPYIGARVAYGHVKHQVHSVETKTTTVTSKPTATSPQGGPIIQTDPSKPPYHESHSI 106
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H SLG+
Sbjct: 107 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 153
Query: 239 NMHF 242
F
Sbjct: 154 RYRF 157
>gi|309782886|ref|ZP_07677606.1| outer membrane protein W [Ralstonia sp. 5_7_47FAA]
gi|308918310|gb|EFP63987.1| outer membrane protein W [Ralstonia sp. 5_7_47FAA]
Length = 210
Score = 39.4 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 25/101 (24%), Gaps = 10/101 (9%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G + + V+ + L +G DY + +
Sbjct: 120 RFKPYVGAGINYTRISN-----VDLQVPGVGSLDLSKNSFGPALQVGFDYRLTERL---- 170
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + ++ K + + +G+ F
Sbjct: 171 -YFNVDLKKTWISADVKMGGQTISKVKVDPWLLGVGLGYRF 210
>gi|325132780|gb|EGC55462.1| opacity protein [Neisseria meningitidis M6190]
Length = 149
Score = 39.4 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 28/124 (22%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V + +K ++
Sbjct: 39 DKFKPYIGARVAYGHVKHQVHSVETKTTTVTSKPTATSPQGGPIIQTDPSKPPYHESHSI 98
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H SLG+
Sbjct: 99 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 145
Query: 239 NMHF 242
HF
Sbjct: 146 RYHF 149
>gi|71280990|ref|YP_266811.1| OmpW family outer membrane protein [Colwellia psychrerythraea 34H]
gi|71146730|gb|AAZ27203.1| outer membrane protein, OmpW family [Colwellia psychrerythraea 34H]
Length = 237
Score = 39.4 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 9/105 (8%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D + + DG + +GLDY ++ + S++ S R
Sbjct: 135 PYVGVGVNYTIFFDEDFTS-TPQAAGFSNLELDGS-WGYSVQLGLDYELDKNWSVNVSAR 192
Query: 205 YIPHHIHSVNNSNAKSDVER-------VDRKGNAHIASLGINMHF 242
YI + + N + V+ + + S+ + F
Sbjct: 193 YIDINTKATFNIDNALGVDGGLVGKGSASVDVDPMVYSVMLGYTF 237
>gi|300023916|ref|YP_003756527.1| porin opacity type [Hyphomicrobium denitrificans ATCC 51888]
gi|299525737|gb|ADJ24206.1| porin opacity type [Hyphomicrobium denitrificans ATCC 51888]
Length = 267
Score = 39.4 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 66/273 (24%), Gaps = 45/273 (16%)
Query: 3 FNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLH 62
FN + + A DL L +E SG Y+
Sbjct: 2 FNARKVSILGAAFVLGSVLSASAADL-----GGLKDEPIAAPAAAGP-----SGWYIRAD 51
Query: 63 ISRLYETHPLADTINRKTYNSLL-------PNGLGIELGHNIQLEDFV-FGINCHTTAAK 114
+ P + + + G+G G + + V +
Sbjct: 52 GGYAWYNKPGIEITTPYSAHDTNMDGAWSVGGGIGRYFGRGFRGDITVDHLFDASAKTTL 111
Query: 115 DDSTFYRLKEKYFIYGDVV-LKAGYSV---DSLLIYGMGGFGGAYVIDSSLE-------- 162
+ K+ VV Y + + Y GG G A+ SS
Sbjct: 112 CECGTDVGHAKFDFSSTVVLANLYYDINRGGRFMPYIGGGIGFAHNEASSGTIDPECGCE 171
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIG-------------LDYMVNYDISLSASYRYIPHH 209
S N+ G + + G + + L YR++
Sbjct: 172 GTLGGGSSNSFAAAGMAGFAWRIRGGEMRYMGGGMKDEPVAVSSGNALYLDVGYRFLYLG 231
Query: 210 IHSVNNS--NAKSDVERVDRKGNAHIASLGINM 240
+ + + + AH +G+
Sbjct: 232 DVKTGAADWDGGFAEDVKVKDVTAHQIRVGLRY 264
>gi|194098316|ref|YP_002001374.1| outer membrane protein [Neisseria gonorrhoeae NCCP11945]
gi|193933606|gb|ACF29430.1| outer membrane protein [Neisseria gonorrhoeae NCCP11945]
Length = 228
Score = 39.4 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 13/91 (14%)
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
GA ++ + + + + + G+ + + ++L A YRY
Sbjct: 151 AGAPGGAPTVYPPHKNTQDDHREGNSIRRVGLGVIAGVGFDITPKLTLDAGYRYHNWGRL 210
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 211 E-------------NTRFKTHEASLGVRYRF 228
>gi|326565076|gb|EGE15269.1| Opa-like protein A [Moraxella catarrhalis 46P47B1]
gi|326572887|gb|EGE22872.1| Opa-like protein A [Moraxella catarrhalis CO72]
Length = 216
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 58/202 (28%), Gaps = 26/202 (12%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG------INCH 109
G YV + D G GI G + L + IN
Sbjct: 26 GYYVQADLGYSNLEAKYNDNRPNDNKLEDKGLGYGISFGKDTDLARYALDYTNYGKINSS 85
Query: 110 TTAAKDDSTFYRLKEKYFIYG-DVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVE 165
T +T + + + L A Y D+ Y G + +
Sbjct: 86 YTYQPQTNTNTSIISSGELKAQSLGLSAIYDFDTVSGFTPYAGARVGINQIKSTVSTVTT 145
Query: 166 SDNSKNAKGRFDG-HGSSVVLGIGLDYMVNY--DISLSASYRYIPHHIHSVNNSNAKSDV 222
+ ++++ + + G Y++N ++ Y Y+ K D
Sbjct: 146 TTSAQSTTHSQKQENKVGFGVLAGAQYVINPQLNVDAGVEYNYL-----------GKYDK 194
Query: 223 ERVDRKGNAHI--ASLGINMHF 242
D K AH A +G+ +F
Sbjct: 195 LDTDSKLKAHQYGAKVGLRYNF 216
>gi|254672209|emb|CBA05123.1| Opacity protein and related surface antigens [Neisseria
meningitidis alpha275]
Length = 233
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 29/124 (23%), Gaps = 34/124 (27%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------------------- 180
D Y +V + + +K
Sbjct: 123 FDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSATKPGQIPSLVTKPAYHESHSI 182
Query: 181 --SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 183 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 229
Query: 239 NMHF 242
HF
Sbjct: 230 RYHF 233
>gi|120610559|ref|YP_970237.1| OmpA domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120589023|gb|ABM32463.1| OmpA domain protein transmembrane region-containing protein
[Acidovorax citrulli AAC00-1]
Length = 200
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 52/186 (27%), Gaps = 28/186 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+GL+ + + L + + ++ G + G G+
Sbjct: 43 GYIGLNAGQ--SKYDLRNGTSPFDFDDSD-TGWKLYTGGFFHPN---VGVEFGYLNFGKA 96
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + + +V +A S + I+G G S N
Sbjct: 97 TRLGGDTKAQGLNFSLVGRAPIS-EQFDIFGKLGTTYGRTK-------TSGNPGFGVATG 148
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
D G + G G+ + N + + H D K + + ++
Sbjct: 149 DDSGFGLSYGAGVRWAFNPQWAAVLEWERHRLHF--------------ADGKSDVDMTTI 194
Query: 237 GINMHF 242
G+ +
Sbjct: 195 GVQYRY 200
>gi|28897410|ref|NP_797015.1| putative outer membrane protein A [Vibrio parahaemolyticus RIMD
2210633]
gi|260363529|ref|ZP_05776358.1| OmpA domain protein [Vibrio parahaemolyticus K5030]
gi|260876368|ref|ZP_05888723.1| OmpA domain protein [Vibrio parahaemolyticus AN-5034]
gi|260898639|ref|ZP_05907135.1| OmpA domain protein [Vibrio parahaemolyticus Peru-466]
gi|260899261|ref|ZP_05907656.1| OmpA domain protein [Vibrio parahaemolyticus AQ4037]
gi|28805622|dbj|BAC58899.1| putative outer membrane protein A [Vibrio parahaemolyticus RIMD
2210633]
gi|308086921|gb|EFO36616.1| OmpA domain protein [Vibrio parahaemolyticus Peru-466]
gi|308092873|gb|EFO42568.1| OmpA domain protein [Vibrio parahaemolyticus AN-5034]
gi|308106666|gb|EFO44206.1| OmpA domain protein [Vibrio parahaemolyticus AQ4037]
gi|308113020|gb|EFO50560.1| OmpA domain protein [Vibrio parahaemolyticus K5030]
gi|328472570|gb|EGF43433.1| putative outer membrane protein A [Vibrio parahaemolyticus 10329]
Length = 187
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 23/187 (12%), Positives = 53/187 (28%), Gaps = 29/187 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG + + + + ++ + ++ +
Sbjct: 30 GVYVGANYGY----------LKVDGQDDFDDDSDAMQALVGYRFNRYLALEGGYIDFGSY 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + Y + D + +Y GG + A
Sbjct: 80 GNNLANAE--TDGYTAALKVTAPITDRVDVYAKGGQMWYSTDYNV-----------AGFH 126
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ V G G+ + V + ++A Y + + NA++ + + + AS
Sbjct: 127 GNKDDEGVFAGAGVGFKVTDNFLVNAEYTWYDVEL------NAENVFDGANTNTDFKQAS 180
Query: 236 LGINMHF 242
LG+ F
Sbjct: 181 LGVEYRF 187
>gi|212636158|ref|YP_002312683.1| outer membrane protein W [Shewanella piezotolerans WP3]
gi|212557642|gb|ACJ30096.1| OmpW [Shewanella piezotolerans WP3]
Length = 215
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + L Y G D+ + D + + V +G+DY +N
Sbjct: 113 FGNANSKLRPYAGIGVNFTNFFDNEFTQDAKDLGLSELSLSNSW--GVAAQVGIDYQMND 170
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++AS Y N D ++ S+G F
Sbjct: 171 NWLINASVWYAQISTDVTFNLGDAPQNVETDIDPWVYMVSVG--YTF 215
>gi|91223582|ref|ZP_01258847.1| long-chain fatty acid transport protein [Vibrio alginolyticus
12G01]
gi|91191668|gb|EAS77932.1| long-chain fatty acid transport protein [Vibrio alginolyticus
12G01]
Length = 419
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 25/96 (26%), Gaps = 8/96 (8%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y + G E + K + IG Y +N + +L A Y Y
Sbjct: 278 YSIQYIGWKDFDQIDFENLNQGLLKGGYSKDYQWQDGWHYAIGGTYYLNNNWTLRAGYMY 337
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ S + S G + H
Sbjct: 338 --------DTSAQDKVTSISVPDSDRQWFSTGFSYH 365
>gi|269963499|ref|ZP_06177825.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831796|gb|EEZ85929.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 198
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 22/185 (11%), Positives = 49/185 (26%), Gaps = 32/185 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + + L D + G+ +G+N + + +
Sbjct: 26 YIGGKLGY----NALNDACHLDAPCDDDSFAAGMHIGYNF---NEYVAAEYGVDYLGNFT 78
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ K + GD+ + + + + + + D
Sbjct: 79 ANFDKAGKNTVDGDL-------------WALTLAPKFNLPLTDSWNLFAKVGAAYMMAGD 125
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+G +Y +NY+ SL A Y+ + + +G
Sbjct: 126 EKDFVPTGSLGAEYQINYNWSLRAEYQRYQDMSDDIIDDMDADFFG------------IG 173
Query: 238 INMHF 242
N F
Sbjct: 174 FNYKF 178
>gi|156973571|ref|YP_001444478.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116]
gi|156525165|gb|ABU70251.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116]
Length = 318
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 58/187 (31%), Gaps = 43/187 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAAKDD 116
YVG + + + + D + LG +G+ + + F + D
Sbjct: 23 YVGGKMGKSW----MEDACVAGQACDKDGSTLGAFVGYEM---NDYFSVEAGFDNLGDFD 75
Query: 117 STFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T + + + K + + + +YG G + D
Sbjct: 76 QTSFGGHVEA---ITLAPKFSLPITEDIALYGKVGGAYLMMNDG---------------- 116
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
S + GL++ V+ +++ A Y+ +D+ K + A+
Sbjct: 117 --KDDYSYLGAAGLEFNVSENVTARAEYQ-------------TITDISNDSVKAMGNSAT 161
Query: 236 LGINMHF 242
LG+ F
Sbjct: 162 LGVAFKF 168
>gi|153837722|ref|ZP_01990389.1| putative outer membrane protein A [Vibrio parahaemolyticus AQ3810]
gi|153839493|ref|ZP_01992160.1| putative outer membrane protein A [Vibrio parahaemolyticus AQ3810]
gi|153839539|ref|ZP_01992206.1| putative outer membrane protein A [Vibrio parahaemolyticus AQ3810]
gi|149746942|gb|EDM57930.1| putative outer membrane protein A [Vibrio parahaemolyticus AQ3810]
gi|149746972|gb|EDM57960.1| putative outer membrane protein A [Vibrio parahaemolyticus AQ3810]
gi|149748917|gb|EDM59748.1| putative outer membrane protein A [Vibrio parahaemolyticus AQ3810]
Length = 187
Score = 39.4 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 23/187 (12%), Positives = 53/187 (28%), Gaps = 29/187 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG + + + + ++ + ++ +
Sbjct: 30 GVYVGANYGY----------LKVDGQDDFDDDSDAMQALVGYRFNRYLALEGGYIDFGSY 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + Y + D + +Y GG + A
Sbjct: 80 GNNLANAE--TDGYTAALKVTAPITDRVDVYAKGGQMWYSTDYNV-----------AGFH 126
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ V G G+ + V + ++A Y + + NA++ + + + AS
Sbjct: 127 GNKDDEGVFAGAGVGFKVTDNFLVNAEYTWYDVEL------NAENVFDGANTNTDFKQAS 180
Query: 236 LGINMHF 242
LG+ F
Sbjct: 181 LGVEYRF 187
>gi|940793|emb|CAA79364.1| outer membrane protein [Neisseria gonorrhoeae]
gi|940794|emb|CAA79365.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 244
Score = 39.4 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 15/71 (21%)
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G V G+G+D + +++L A YRY + +
Sbjct: 189 ESRSISSLGFGAVAGVGID--ITPNLTLDAGYRYHNWGRLE-------------NTRFKT 233
Query: 232 HIASLGINMHF 242
H ASLG+ F
Sbjct: 234 HEASLGVRYRF 244
>gi|91794083|ref|YP_563734.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91716085|gb|ABE56011.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 373
Score = 39.4 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 62/200 (31%), Gaps = 21/200 (10%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+ + + YVG + + P D + KT + P + G+
Sbjct: 19 LPFSASADEGLTPWYVGTGVG-INNYEPNCDLMTMKTCSKDDPYAWDVHGGYLFNEN--- 74
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
FGI D + DV + G S+ + ++ + ++
Sbjct: 75 FGIELGY----LDLGRAEWTDYSNKSHDVGAR-GLSLGLVALFPLANKWSITAEAGAMNY 129
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDV 222
+ + + + G + +G G+ Y ++ L A Y RY N + +S+
Sbjct: 130 LIYNKKQWHTEYYSDSGVAPYVGAGIGYNFTDNLMLQAKYRRYENLDEKQWNTLSMESNY 189
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ +N F
Sbjct: 190 WGLA-----------LNYRF 198
>gi|301164479|emb|CBW24037.1| putative membrane protein [Bacteroides fragilis 638R]
Length = 445
Score = 39.4 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 30/104 (28%), Gaps = 22/104 (21%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
A+ F++F + + E V+ Y W Y G
Sbjct: 17 RAILFLLFSPLFGTGFAQT-------------ETPVKVDKPLKSYSHW---YFGAEYGVP 60
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
+ D + + + + G G+ Q+ ++ GI
Sbjct: 61 F---LFGDFTSFSADKNYVGSQFGGFAGY--QVNSWI-GIEASA 98
>gi|262368300|ref|ZP_06061629.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262315978|gb|EEY97016.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 425
Score = 39.4 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 28/90 (31%), Gaps = 1/90 (1%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ V + K + + +G+G + + S+ A Y ++ V
Sbjct: 249 LNHKFNDALSVSGRAMAHEKRIQNQEEWAYGVGVGAKFDITPVTSVKADYYHVKGDSSFV 308
Query: 214 NNSNAKSDVERVDRKG-NAHIASLGINMHF 242
+ +N + ++G+ F
Sbjct: 309 SFTNPGVVATGTSIEQSEFDSITVGLTQKF 338
>gi|78221563|ref|YP_383310.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Geobacter metallireducens GS-15]
gi|78192818|gb|ABB30585.1| Thrombospondin type 3 repeat:OmpA/MotB [Geobacter metallireducens
GS-15]
Length = 447
Score = 39.4 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 38/151 (25%), Gaps = 14/151 (9%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK 123
L + T + + G+ LG+N +
Sbjct: 29 GALSVSPFGGYTFFDRDSDLKSRPTGGLRLGYNFTEN---VAVEGSGAYTDTKYDNGNGS 85
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
+ YG +L ++ + G GG D +
Sbjct: 86 SNVYRYGAELLYHFIPQSRVVPFLAAGLGGITYEGREGVP-----------DADRTDGIL 134
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
G G+ + I+L A R I ++N
Sbjct: 135 TAGGGVKLFLVDRIALRADGRNIFTFNDALN 165
>gi|28898986|ref|NP_798591.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
RIMD 2210633]
gi|153836946|ref|ZP_01989613.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
AQ3810]
gi|260365268|ref|ZP_05777825.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
K5030]
gi|260878818|ref|ZP_05891173.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
AN-5034]
gi|260896260|ref|ZP_05904756.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
Peru-466]
gi|260899971|ref|ZP_05908366.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
AQ4037]
gi|28807205|dbj|BAC60475.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
RIMD 2210633]
gi|149749719|gb|EDM60464.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
AQ3810]
gi|308088818|gb|EFO38513.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
Peru-466]
gi|308094194|gb|EFO43889.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
AN-5034]
gi|308107408|gb|EFO44948.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
AQ4037]
gi|308115460|gb|EFO53000.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
K5030]
gi|328474476|gb|EGF45281.1| long-chain fatty acid transport protein [Vibrio parahaemolyticus
10329]
Length = 416
Score = 39.4 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 25/96 (26%), Gaps = 8/96 (8%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y + G E + K + IG Y +N + +L A Y Y
Sbjct: 275 YSIQYIGWKDFDQIDFENLNQGLLKGGYSKDYQWQDGWHYAIGGTYYLNNNWTLRAGYMY 334
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ S + S G + H
Sbjct: 335 --------DTSAQDKVTSISVPDSDRQWFSTGFSYH 362
>gi|293602886|ref|ZP_06685325.1| outer membrane protein OmpW [Achromobacter piechaudii ATCC 43553]
gi|292818680|gb|EFF77722.1| outer membrane protein OmpW [Achromobacter piechaudii ATCC 43553]
Length = 212
Score = 39.4 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 5/92 (5%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G + + +++ + G V +G D+ +N ++A RYI
Sbjct: 126 YIGVGINYTHFFDTKAEGALKGSDLKMGDSWGVAAQLGADFKINERWFMNADIRYIDIKS 185
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + +A+LG+ F
Sbjct: 186 KVKLDGQHIGTA-----RIDPWVATLGVGYRF 212
>gi|417405|sp|Q04881|OPA68_NEIGO RecName: Full=Opacity protein opA68; AltName: Full=opA27.5; Flags:
Precursor
gi|940798|emb|CAA79369.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 238
Score = 39.4 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 27/91 (29%), Gaps = 13/91 (14%)
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
GA S++ + + G+ + + ++L A YRY
Sbjct: 161 AGARGTVSTVHPPYKSTQDAHHQSDSIRRVGLGVIAGVGFGITPKLTLDAGYRYHNWGRL 220
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 221 E-------------NTRFKTHEASLGVRYRF 238
>gi|193212247|ref|YP_001998200.1| tia invasion determinant-related protein [Chlorobaculum parvum NCIB
8327]
gi|193085724|gb|ACF11000.1| tia invasion determinant-related protein [Chlorobaculum parvum NCIB
8327]
Length = 229
Score = 39.4 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+ Y MGG G A++ + + + D + LG GL V ++++
Sbjct: 141 ITPYVMGGVGAAFMGMDVSFRDNGVRYEQSY---DKTAFAWQLGAGLGIKVMNNVTIDLG 197
Query: 203 YRYIPHHIHSV 213
YRY
Sbjct: 198 YRYFRAGDIDF 208
>gi|161869837|ref|YP_001599006.1| opacity protein [Neisseria meningitidis 053442]
gi|161595390|gb|ABX73050.1| opacity protein [Neisseria meningitidis 053442]
Length = 229
Score = 39.4 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 30/123 (24%), Gaps = 33/123 (26%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--------------------H 179
D Y +V S ++ N G +
Sbjct: 120 FDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIR 179
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 180 RLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGVR 226
Query: 240 MHF 242
F
Sbjct: 227 YRF 229
>gi|317407227|gb|EFV87210.1| TPR repeat-containing protein [Achromobacter xylosoxidans C54]
Length = 778
Score = 39.4 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 23/188 (12%)
Query: 21 NHSLAVDLYLPRKIDLF---NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTIN 77
+ + PR D F N A+ Y+ D G ++ + T+
Sbjct: 562 GTATRTGILTPRSTDTFCGLNSANQTAHYKADAGS-------GGWLAYVTYGLYEGTTLR 614
Query: 78 RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG 137
+ G ++ G++ Q F + + T DS +LK + +G L+ G
Sbjct: 615 IDRPDWFTMEGY-VQAGYSWQDMPARFWLRDNATGKDSDSVRGKLK-RDQAFGAGELRIG 672
Query: 138 --YSVDS------LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
Y +D+ YG+ G + + D+S + G+GSS LG G
Sbjct: 673 RSYRLDAISEKLVFFPYGVIGADWLWTNNKVTGVQLGDSSTHPLQ---GNGSSWSLGAGP 729
Query: 190 DYMVNYDI 197
+ + Y
Sbjct: 730 GFNLRYWF 737
>gi|297185497|gb|ADI24128.1| outer membrane protein W [Aeromonas hydrophila]
Length = 198
Score = 39.4 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 28/92 (30%), Gaps = 6/92 (6%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G V ++ E + +G+D + ++ S +
Sbjct: 113 YIGIGVNYTTFFDEEGRGPLAGTEVKMDDSWGIAGQVGIDMAITDRWFVNGSAWIMDID- 171
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S+ + + +D K + +G+ F
Sbjct: 172 -----SDVHTAIGTIDTKIDPMAFMVGVGYRF 198
>gi|326334955|ref|ZP_08201155.1| outer membrane insertion C- signal domain protein [Capnocytophaga
sp. oral taxon 338 str. F0234]
gi|325692760|gb|EGD34699.1| outer membrane insertion C- signal domain protein [Capnocytophaga
sp. oral taxon 338 str. F0234]
Length = 209
Score = 39.4 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 7/109 (6%)
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ + +G +YVI + + + A F +G GL +
Sbjct: 108 GRLTLEAGPQFGFLVGKPEVSYVIGNQTSSTKVEKDAYASFDF-------AVGAGLALHL 160
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+A Y + + NN++ ++ D + S G+ + F
Sbjct: 161 TDHLFLNARYTHSLTNAFDKNNTSLRNANISRDNDFKNSVLSFGLGVKF 209
>gi|269965667|ref|ZP_06179780.1| Long-chain fatty acid transport protein [Vibrio alginolyticus 40B]
gi|269829735|gb|EEZ83971.1| Long-chain fatty acid transport protein [Vibrio alginolyticus 40B]
Length = 419
Score = 39.4 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 25/96 (26%), Gaps = 8/96 (8%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y + G E + K + IG Y +N + +L A Y Y
Sbjct: 278 YSIQYIGWKDFDQIDFENLNQGLLKGGYSKDYQWQDGWHYAIGGTYYLNNNWTLRAGYMY 337
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ S + S G + H
Sbjct: 338 --------DTSAQDKVTSISVPDSDRQWFSTGFSYH 365
>gi|167644831|ref|YP_001682494.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
gi|167347261|gb|ABZ69996.1| OmpA/MotB domain protein [Caulobacter sp. K31]
Length = 409
Score = 39.4 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 59/215 (27%), Gaps = 28/215 (13%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
+ W+G + + P Y S +G+ G
Sbjct: 59 WTFSADDDWAGF---GRLGYRFT--PNWRVEGEYGYRSGDISGVRGSAARPQPQGLCTAG 113
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLE 162
I T A LK ++ Y S + G G A+V +
Sbjct: 114 IERTTAAPTCGKPEGELKAT-----TLMANVIYDFMPGSSWRPFVGAGVGTAWVHNKVYG 168
Query: 163 KVESDNSKNAKGRFDGHGS-----SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
++ + A+ + + +G+ + + SL + RY+ +
Sbjct: 169 QLSGVPTGAAQFQNTSFDDVDQALAWQGLLGVAWDFAPNWSLDLTGRYLQTDDLQWGSVT 228
Query: 218 AK----------SDVERVDRKGNAHIASLGINMHF 242
+ +DV + K +LGI F
Sbjct: 229 SNVGGAGHFGPVTDVGTFEGKYKDTSLTLGIRYTF 263
>gi|587548|emb|CAA85513.1| outer membrane protein [Serratia marcescens]
Length = 172
Score = 39.4 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 49/178 (27%), Gaps = 27/178 (15%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
++ + + + G L + + ++ G+ T + D +
Sbjct: 22 AFAGQSTVSAGYAQGDFQGVANKADGFNLKYRYEFDNNPLGVIGSFTHLEKDGSQDGFYN 81
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K A D IYG+ G G N++N R D
Sbjct: 82 KAQYNSISAGPAYRINDWASIYGLVGLGYGKFTT---------NAQNGTSRHDTADYGFT 132
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G GL + +++L Y + R + ++G+ F
Sbjct: 133 YGAGLQFNPIENVALDVGYE------------------QNRIRSVDVGTWNVGVGYRF 172
>gi|302037215|ref|YP_003797537.1| hypothetical protein NIDE1885 [Candidatus Nitrospira defluvii]
gi|300605279|emb|CBK41612.1| exported protein of unknown function, OmpA family [Candidatus
Nitrospira defluvii]
Length = 249
Score = 39.4 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 40/155 (25%), Gaps = 16/155 (10%)
Query: 100 EDFVFGINCHTTAAKDDSTFYRLKE------------KYFIYGDVVLKAGYSVDSLLIYG 147
FV G+ + + +V+L+ Y +++ Y
Sbjct: 99 GRFV-GLEADLSGLDGKVNAPSATTGGVTRSANFRLQSVNVMANVLLR--YPGETIQPYI 155
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G G + ++ + G+ V + L Y+Y
Sbjct: 156 GIG-AGVSGGFARDLNLQHSTIGTVHENAADGAFAYQFLGGVRANVTERMFLFTEYKYFV 214
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + AHI S GI F
Sbjct: 215 ANYQWESEVANGARGPSFTMNYRAHIVSGGIGFTF 249
>gi|45441799|ref|NP_993338.1| outer membrane protein W [Yersinia pestis biovar Microtus str.
91001]
gi|145598230|ref|YP_001162306.1| outer membrane protein W [Yersinia pestis Pestoides F]
gi|45436661|gb|AAS62215.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|145209926|gb|ABP39333.1| hypothetical protein YPDSF_0933 [Yersinia pestis Pestoides F]
Length = 215
Score = 39.4 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D SD D V G+DYMV+ + L+
Sbjct: 118 DKLRPYLGIGLNYTKFFDEKFNATGSDIGLTNLSVKDSW--GVAGQAGMDYMVSENWMLN 175
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ N + ++ + + + G F
Sbjct: 176 MSVWWMNIESDV--KFNLAGEEHSINTRLDPWVFMFGAGYRF 215
>gi|3288111|emb|CAA05091.1| outer membrane protein 21, Omp21 [Delftia acidovorans]
Length = 204
Score = 39.4 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 27/103 (26%), Gaps = 8/103 (7%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+ Y G S + L IG DY ++ + SL
Sbjct: 110 FGAFKPYVGAGVNYTRF---SSVSFNPAVQAALNPSIKKNSFGGALQIGFDYALDKNWSL 166
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + + K N + +G+ F
Sbjct: 167 N-----FDVKKVFIETDVSSAGTKVGTFKVNPVLVGVGLGYRF 204
>gi|317048317|ref|YP_004115965.1| OmpW family protein [Pantoea sp. At-9b]
gi|316949934|gb|ADU69409.1| OmpW family protein [Pantoea sp. At-9b]
Length = 210
Score = 39.4 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D+ + D + D + +GLDY +N D L+AS
Sbjct: 117 PYVGAGINYTTFFDAKFNQTGRDAGLSDLSVKDSW--GLAGQVGLDYQINRDWMLNASLW 174
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ +N + ++ + + + G+ F
Sbjct: 175 YMDIDTEVKFKANGV--NQNINTRIDPWVFFFGVGYRF 210
>gi|327393264|dbj|BAK10686.1| outer membrane protein X precursor OmpX [Pantoea ananatis AJ13355]
Length = 170
Score = 39.4 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 40/140 (28%), Gaps = 9/140 (6%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK 123
+ + Y + G L + + G T + D T +
Sbjct: 19 GSAMAQSTVTGGYAQSDYQGVANKANGFNLKYRYEDGSNPLGWIGSFTYTEKDRTEDGIY 78
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K YG A D IYG+ G G N ++G+ D
Sbjct: 79 NKGQYYGITGGPAFRLNDWASIYGVVGVGYGKYQ---------QNDTASRGKTDTSDYGF 129
Query: 184 VLGIGLDYMVNYDISLSASY 203
G G+ + +++L Y
Sbjct: 130 SYGAGMQFNPIENVALDVGY 149
>gi|241664480|ref|YP_002982840.1| OmpW family protein [Ralstonia pickettii 12D]
gi|240866507|gb|ACS64168.1| OmpW family protein [Ralstonia pickettii 12D]
Length = 224
Score = 39.4 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 25/101 (24%), Gaps = 10/101 (9%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G + + V+ + L +G DY + +
Sbjct: 134 RFKPYVGAGINYTRISN-----VDLQVPGVGSLDLSKNSFGPALQVGFDYRLTERL---- 184
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + ++ K + + +G+ F
Sbjct: 185 -YFNVDLKKTWISADVKMGGQTISKVKVDPWLLGVGLGYRF 224
>gi|51596449|ref|YP_070640.1| outer membrane protein W [Yersinia pseudotuberculosis IP 32953]
gi|170024284|ref|YP_001720789.1| outer membrane protein W [Yersinia pseudotuberculosis YPIII]
gi|186895500|ref|YP_001872612.1| outer membrane protein W [Yersinia pseudotuberculosis PB1/+]
gi|51589731|emb|CAH21361.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|169750818|gb|ACA68336.1| OmpW family protein [Yersinia pseudotuberculosis YPIII]
gi|186698526|gb|ACC89155.1| OmpW family protein [Yersinia pseudotuberculosis PB1/+]
Length = 211
Score = 39.4 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D SD D V G+DYMV+ + L+
Sbjct: 114 DKLRPYLGIGLNYTKFFDEKFNSTGSDIGLTNLSVKDSW--GVAGQAGMDYMVSENWMLN 171
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ N + ++ + + + G F
Sbjct: 172 MSVWWMNIESDV--KFNLAGEEHSINTRLDPWVFMFGAGYRF 211
>gi|323498491|ref|ZP_08103484.1| hypothetical protein VISI1226_09469 [Vibrio sinaloensis DSM 21326]
gi|323316380|gb|EGA69398.1| hypothetical protein VISI1226_09469 [Vibrio sinaloensis DSM 21326]
Length = 204
Score = 39.0 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 54/161 (33%), Gaps = 23/161 (14%)
Query: 56 GNYVGLHISRL-YETHPLADTINRKTYN------SLLPNGLGIELGHNIQLEDFVFGINC 108
G Y+G + ++ L D N T N L + G+ I + + GI
Sbjct: 25 GFYLGAGLGTTDFDDGGLIDDANDYTNNAARLSTDSDGTTLKLIAGYQI---NRIVGIEA 81
Query: 109 HTTA---AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKV 164
T + +L + GY+ D+ L +G G G
Sbjct: 82 QYTKYGDTDVKALGTKLGTLKHDSFAISANLGYTFDNGLRPFGTIGLGSISYE------- 134
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVN--YDISLSASY 203
E + FD +G ++ G+GL+Y ++ A Y
Sbjct: 135 EKGTGEAQGFDFDDNGGALRAGLGLEYAPASFNGFAIRAGY 175
>gi|322832098|ref|YP_004212125.1| virulence-related outer membrane protein [Rahnella sp. Y9602]
gi|321167299|gb|ADW72998.1| virulence-related outer membrane protein [Rahnella sp. Y9602]
Length = 177
Score = 39.0 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 6/146 (4%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+G+ S +T + + + G L + + + G T +DDS+
Sbjct: 16 LGVSSSAFADTSTVTAGYAQGDAQGVANKANGFNLKYRWEQDSNPLGAIGSFTYIEDDSS 75
Query: 119 FYRLKE-KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
K YG A D + IYG+ G G + ++ KN D
Sbjct: 76 PASGDYRKAQYYGLTAGPAYRLADWVSIYGVVGVGYGKFQYNEAAASTANREKN-----D 130
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASY 203
G GL + +++L SY
Sbjct: 131 TSDYGFSYGAGLQFNPIQNVALDVSY 156
>gi|317164023|gb|ADV07564.1| hypothetical protein NGTW08_0592 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 121
Score = 39.0 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 13/51 (25%)
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +++L A YRY + + H ASLG+ F
Sbjct: 26 DITPNLTLDAGYRYHNWGRLE-------------NTRFKTHEASLGVRYRF 63
>gi|255261430|ref|ZP_05340772.1| lipid A oxidase [Thalassiobium sp. R2A62]
gi|255103765|gb|EET46439.1| lipid A oxidase [Thalassiobium sp. R2A62]
Length = 221
Score = 39.0 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 26/201 (12%), Positives = 58/201 (28%), Gaps = 27/201 (13%)
Query: 57 NYVGLHIS------RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC-- 108
Y+G S + I + ++ P G+ + + FGI
Sbjct: 33 FYLGAQTSPHSRVVGSNAGGDFDELIGWEGRSADAPPYYGVRATW-WKNDTLGFGIELNH 91
Query: 109 ------HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSL 161
AA + I ++ + Y G G A +
Sbjct: 92 AKVYAPDDEAAAAGFDNVEFTDGLNILTVNTMRRWPDRWGNFTPYVGAGIGLA------I 145
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
V+ D+ N + G +V+ G Y + ++ Y++ +
Sbjct: 146 PHVDVDDGTNETFEYQVTGPAVMGVAGAKYDITDQWAVFGEYKFTYSQNEAELEGGG--- 202
Query: 222 VERVDRKGNAHIASLGINMHF 242
++ + ++G++ +F
Sbjct: 203 --TLESDIITNALNVGVSFNF 221
>gi|119470321|ref|ZP_01613080.1| putative TonB-dependent receptor protein with OmpA-like
transmembrane domain [Alteromonadales bacterium TW-7]
gi|119446493|gb|EAW27768.1| putative TonB-dependent receptor protein with OmpA-like
transmembrane domain [Alteromonadales bacterium TW-7]
Length = 187
Score = 39.0 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 45/150 (30%), Gaps = 17/150 (11%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G I + D+ N ++ L +G Q ++ ++ D
Sbjct: 32 YTG--IGYGQYSFEFEDSENDTDFDD-DAQMLKGYVG--TQFNEY---LSVELAYQNFDE 83
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + + G + +Y GG+ V S ++ G
Sbjct: 84 VSDIDSKAEIDGVSLAARLGIPLTESFSVYAKGGWLEWDADIKQELPVGSVSTSQDGGDA 143
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASY-RY 205
G GL++ + ++ + Y RY
Sbjct: 144 -------FYGAGLEFAFSSNVQMRLEYERY 166
>gi|170727714|ref|YP_001761740.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169813061|gb|ACA87645.1| OmpA domain protein transmembrane region-containing protein
[Shewanella woodyi ATCC 51908]
Length = 177
Score = 39.0 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 48/187 (25%), Gaps = 37/187 (19%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G + G G++ + I
Sbjct: 28 GYYIGAMGGYGELEANEFNE---------SAASYGGYAGYSFGKD---LAIE-------- 67
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + GDV +A + S K+ ++ + G
Sbjct: 68 --STFFTTANLADEGDVKARA-------VTLAAKLNHFFSPTYSMFIKIGVASTDVSAGI 118
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
D + + G G + + ++++ Y V ++ + D
Sbjct: 119 DDYSATGWIWGAGFNMAITDNVNVRLGY--------EVILTDLEHDTSDDIIDSELANLY 170
Query: 236 LGINMHF 242
LGIN F
Sbjct: 171 LGINYQF 177
>gi|2253258|gb|AAC32696.1| opacity protein Opa95 [Neisseria meningitidis]
Length = 247
Score = 39.0 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 28/124 (22%), Gaps = 34/124 (27%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------------------- 180
D Y +V + + +K
Sbjct: 137 FDKFKPYIGVRVAYGHVKHQVHSVRKETTTVFSKPSGSTTKPGEIPSLVTKPAYHESNSI 196
Query: 181 --SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 197 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGV 243
Query: 239 NMHF 242
F
Sbjct: 244 RYRF 247
>gi|333031277|ref|ZP_08459338.1| putative hemin receptor [Bacteroides coprosuis DSM 18011]
gi|332741874|gb|EGJ72356.1| putative hemin receptor [Bacteroides coprosuis DSM 18011]
Length = 532
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 20/88 (22%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + + + L + V ++L A Y Y +
Sbjct: 344 QSLNLLQTDIDTYNELSGDNISDFKLRTPWKFNFSLGHNVGDFLALGAEYEYQDYSSMKF 403
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMH 241
S D H LG+
Sbjct: 404 KYDGGGSMGVNTDMLKGVHTLKLGLEYR 431
>gi|307721661|ref|YP_003892801.1| hypothetical protein Saut_1745 [Sulfurimonas autotrophica DSM
16294]
gi|306979754|gb|ADN09789.1| conserved hypothetical protein [Sulfurimonas autotrophica DSM
16294]
Length = 206
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 15/192 (7%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYV---GLHISRLYETHP 71
+ L+ L+ D + + ++E + E G Y+ GL T
Sbjct: 6 FLCLSGALLLSTTLFAAEVSDEQDASRAHIEAKHHEEGN---LYIVAKGLISLGDTYTEE 62
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
DT G GI+LG+ + F + T + E+ G
Sbjct: 63 ATDTEPEAILKGDTGQGFGIDLGYRLGYG---FATEFDFSYTHTTVTKSVIGEEDRRAGA 119
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
YS L+YG ++ + E + K + +G GL+Y
Sbjct: 120 DY----YSYGIDLLYGY--HVNEEIVLFAKAGWEIEKEKISDFGINGTNDGFSYAAGLEY 173
Query: 192 MVNYDISLSASY 203
++ +L Y
Sbjct: 174 GLSAHWALVGEY 185
>gi|296284930|ref|ZP_06862928.1| peptidoglycan-associated protein [Citromicrobium bathyomarinum
JL354]
Length = 371
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 21/180 (11%), Positives = 48/180 (26%), Gaps = 23/180 (12%)
Query: 80 TYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY- 138
T + G +G++ A D G + AG
Sbjct: 52 TQDYDAGYDFGGLVGYD--FGPVRIEAEASYREADADQLIVGTLGFPAGAGTRLAPAGQF 109
Query: 139 ---SVDSLLIYGMGGFGGAYVID-------------SSLEKVESDNSKNAKGRFDGHGSS 182
+ L + + G D + + + + G +
Sbjct: 110 PANGYVNSLSFMVNGLADFGPDDGLQGFVGGGVGVARTKVQTTINTNGAPGLDDSDTGFA 169
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ G+ V I + YR+ + ++ + DV ++ + +H + +F
Sbjct: 170 WQILAGVRAPVTDRIDVGLKYRF--FNAQNIEMVDRLGDV--LEGRLRSHSLMGTVTYNF 225
>gi|218264865|ref|ZP_03478545.1| hypothetical protein PRABACTJOHN_04255 [Parabacteroides johnsonii
DSM 18315]
gi|218221759|gb|EEC94409.1| hypothetical protein PRABACTJOHN_04255 [Parabacteroides johnsonii
DSM 18315]
Length = 425
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 15/107 (14%)
Query: 142 SLLIYGMGGFGGAYVIDSSL----EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
+ +Y GGF + S ++ S + DG S+ L +G+ Y D
Sbjct: 328 NWNVYVSGGFMIEKGVRSVYHVEAYSLDEQKSATYRSGIDGLQWSLNLSVGVSYRFYRDW 387
Query: 198 SLSAS--YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SL Y Y + V+ + V G+ F
Sbjct: 388 SLYLEPRYSYYFDNNQPVSYRTENMTLIGVG---------AGVRFEF 425
>gi|50121231|ref|YP_050398.1| outer membrane protein W [Pectobacterium atrosepticum SCRI1043]
gi|49611757|emb|CAG75206.1| outer membrane protein W [Pectobacterium atrosepticum SCRI1043]
Length = 211
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D+L Y G D ++ + + + GLDY ++ + L+
Sbjct: 114 DTLRPYLGVGVNYTLFFDEKFNDTGTNAGLSDLSLKNSW--GIAAQAGLDYNLDKNWLLN 171
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ + +D + V + + G+ F
Sbjct: 172 MSVWWMDIDTDVKFKAG--NDQQSVHTRLDPWAFMFGVGYRF 211
>gi|332992205|gb|AEF02260.1| hypothetical protein ambt_03550 [Alteromonas sp. SN2]
Length = 560
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 5/129 (3%)
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
++ F ++ + L+ YS + L Y +G + + E
Sbjct: 433 FQAGYDFSRLTLAFSWRYDESNYLDEDRLRRTYSFGTTLAYKLGSYMYLNSNITYANIEE 492
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
NS+N + +GL+ + ++ S Y YI N +
Sbjct: 493 RSNSENIATGESDN---WNASLGLERKIGRSLTTSIDYNYI--EKSGDLNLGGQFGANYT 547
Query: 226 DRKGNAHIA 234
D++ I
Sbjct: 548 DQRITLSII 556
>gi|2150082|gb|AAC32714.1| opacity protein [Neisseria meningitidis]
Length = 242
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 27/123 (21%), Gaps = 33/123 (26%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG--------------------RFDGH 179
D Y +V + + +K
Sbjct: 133 FDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKSQGSTAPGKIPSSVTKPAYHESHSIS 192
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ G+ + + ++L YRY + + H SLG+
Sbjct: 193 SLGFGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGVR 239
Query: 240 MHF 242
F
Sbjct: 240 YRF 242
>gi|42521744|ref|NP_967124.1| hypothetical protein Bd0100 [Bdellovibrio bacteriovorus HD100]
gi|39574274|emb|CAE77778.1| hypothetical protein Bd0100 [Bdellovibrio bacteriovorus HD100]
Length = 528
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 72/232 (31%), Gaps = 26/232 (11%)
Query: 20 PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGI--WSGNYVGLHISRLYETHPLADTIN 77
N++ L P + N N+ + + + W Y+G+H+ + + T +
Sbjct: 314 GNYTQNSSLTTPESVSGSNNFAPNILVRGELWLNPEW---YMGVHLRQSVFSIDNNQTGS 370
Query: 78 RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA------KDDSTFYRLKEKYFIYGD 131
+ ++ G+ G+N L + FG A D + G
Sbjct: 371 SPSSLNMSVGQYGVNAGYNFLLTNDFFGPKLQIGAGYMTTKFTVDGSTPTTFTSMDYSGF 430
Query: 132 VVLKAG-YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
++ AG + + + +GG Y+ E +S + ++K +D
Sbjct: 431 LISLAGQFPLSEEIPVDIGGRFDFYMNPGMSESQDSGSGSDSKINSFSFF--------MD 482
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + +S + S A G+ F
Sbjct: 483 YKMKTRFKIRGE---LMIENYSTDFSGA---TRATSTSHKMTTLFGGVQYLF 528
>gi|254228460|ref|ZP_04921886.1| Long-chain fatty acid transport protein [Vibrio sp. Ex25]
gi|262393625|ref|YP_003285479.1| long-chain fatty acid transport protein [Vibrio sp. Ex25]
gi|151939048|gb|EDN57880.1| Long-chain fatty acid transport protein [Vibrio sp. Ex25]
gi|262337219|gb|ACY51014.1| long-chain fatty acid transport protein [Vibrio sp. Ex25]
Length = 419
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 25/96 (26%), Gaps = 8/96 (8%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y + G E + K + IG Y +N + +L A Y Y
Sbjct: 278 YSIQYIGWKDFDQIDFENLNQGLLKGGYSKDYQWQDGWHYAIGGTYYLNNNWTLRAGYMY 337
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ S + S G + H
Sbjct: 338 --------DTSAQDKVTSISVPDSDRQWFSTGFSYH 365
>gi|325134697|gb|EGC57336.1| opacity protein [Neisseria meningitidis M13399]
Length = 230
Score = 39.0 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 29/125 (23%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG------------- 186
D Y +V + + +K ++
Sbjct: 119 FDKFKPYIGARVAYGHVKHQVHSVRKETTTTFSKAGAGATEPGKIISGPISKPAYHESHS 178
Query: 187 ---------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G+ + + ++L YRY + + H SLG
Sbjct: 179 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLK-------------NTRFKTHEVSLG 225
Query: 238 INMHF 242
+ HF
Sbjct: 226 MRYHF 230
>gi|308389755|gb|ADO32075.1| outer membrane opacity-related protein [Neisseria meningitidis
alpha710]
Length = 261
Score = 39.0 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 28/124 (22%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV---------------- 184
D Y +V + +K V
Sbjct: 151 DKFKPYIGARVAYGHVKHQVHSVESKNTIVTSKPTQGAAQGGPVPTGFVPKSAYHESHSI 210
Query: 185 ------LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ G+ + + ++L YRY + + H SLG+
Sbjct: 211 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGV 257
Query: 239 NMHF 242
HF
Sbjct: 258 RYHF 261
>gi|297185501|gb|ADI24130.1| outer membrane protein W [Aeromonas hydrophila]
Length = 198
Score = 39.0 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 10/92 (10%), Positives = 29/92 (31%), Gaps = 6/92 (6%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G V ++ E + + V +G+D + ++ S +
Sbjct: 113 YVGIGVNYTTFFDEEGRGALSGTDVKVDDSWGVAGQVGIDMAITDRWFVNGSAWIMDIDT 172
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + ++ K + +G+ F
Sbjct: 173 ------DVHTAIGTINTKVDPMALMVGVGYRF 198
>gi|269961586|ref|ZP_06175948.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833627|gb|EEZ87724.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 318
Score = 39.0 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 58/187 (31%), Gaps = 43/187 (22%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT-TAAKDD 116
YVG + + + + D + LG +G+ + + F + D
Sbjct: 23 YVGGKMGKSW----MEDACVAGQACDKDGSTLGAFVGYEM---NDYFSVEAGFDNLGDFD 75
Query: 117 STFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T + + + K + + + +YG G + D
Sbjct: 76 QTSFGGHVEA---ITLAPKFSLPITEDIALYGKVGGAYLMMNDG---------------- 116
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
S + GL++ ++ +++ A Y+ +D+ K + A+
Sbjct: 117 --KDDYSYLGAAGLEFNISENVTARAEYQ-------------TITDISNDSVKAMGNSAT 161
Query: 236 LGINMHF 242
LG+ F
Sbjct: 162 LGVAFKF 168
>gi|1841504|gb|AAC46102.1| opacity outermembrane protein [Neisseria meningitidis]
Length = 259
Score = 39.0 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 28/124 (22%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V + +K ++
Sbjct: 149 DKFKPYIGARVAYGHVKHQVHSVETKTTTVTSKPTATSPQGGPIIQTDPSKPPYHESHSI 208
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H SLG+
Sbjct: 209 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 255
Query: 239 NMHF 242
HF
Sbjct: 256 RYHF 259
>gi|304397002|ref|ZP_07378881.1| virulence-related outer membrane protein [Pantoea sp. aB]
gi|304355151|gb|EFM19519.1| virulence-related outer membrane protein [Pantoea sp. aB]
Length = 170
Score = 39.0 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 38/141 (26%), Gaps = 9/141 (6%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
+ + Y + G L + + G T + D T +
Sbjct: 18 AGSAMAQSTVTGGYAQSDYQGVANKANGFNLKYRYEDGSNPLGWIGSFTYTEKDRTEDGV 77
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
K YG A D IYG+ G G + + + D
Sbjct: 78 YNKGQYYGVTGGPAFRLNDWASIYGVVGIGYGKYQGNETASRD---------KTDTSDVG 128
Query: 183 VVLGIGLDYMVNYDISLSASY 203
G G+ + DI+L Y
Sbjct: 129 FSYGAGMQFNPMQDIALDVGY 149
>gi|261251967|ref|ZP_05944541.1| ABC-type sulfate transport system permease component [Vibrio
orientalis CIP 102891]
gi|260938840|gb|EEX94828.1| ABC-type sulfate transport system permease component [Vibrio
orientalis CIP 102891]
Length = 367
Score = 39.0 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 38/141 (26%), Gaps = 27/141 (19%)
Query: 102 FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
+ G+ + + Y + + Y G
Sbjct: 254 WSLGLEYEFGQSTLRAEGQINDLSSSFYATGE----HHFGRITPYITYGVEFDQGEHKES 309
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ S ++G Y + ++SL+A ++Y + A
Sbjct: 310 D-------------------SYLIGA--RYDLLDNLSLNAEWQYFEVSKSNGPFVTAP-- 346
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ +AH+ +L IN F
Sbjct: 347 IGTAPDDTDAHLYTLMINFVF 367
>gi|296114288|ref|ZP_06832942.1| outer membrane protein [Gluconacetobacter hansenii ATCC 23769]
gi|295979049|gb|EFG85773.1| outer membrane protein [Gluconacetobacter hansenii ATCC 23769]
Length = 261
Score = 39.0 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 5/101 (4%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
L Y G + + + N+ + G+DY + + +
Sbjct: 166 RLNPYVGVGGTMMWFHNMNASGALGLTKLNSGFT-----GGPSINAGVDYQLVGNWFFNF 220
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + +H+ + +++ R + + S GI F
Sbjct: 221 DVKQMFVRMHAWAENGSETTKVRAHDSLDPTVVSAGIAYRF 261
>gi|90579803|ref|ZP_01235611.1| hypothetical protein VAS14_16496 [Vibrio angustum S14]
gi|90438688|gb|EAS63871.1| hypothetical protein VAS14_16496 [Vibrio angustum S14]
Length = 342
Score = 39.0 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 55/188 (29%), Gaps = 31/188 (16%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG +VG + Y +D + + ++ G++ + FGI
Sbjct: 50 SGFWVGGALGMGY--VSNSDISKFPGSANGEAPSVKLDAGYDF---NQYFGIYGSYDYMH 104
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D + G++ L L +G G Y + + ++
Sbjct: 105 DLGNADMHLATLGVKGNLPL-----TQKLSAFGKLGATYIYADNKNFADNTLHMKSDSFS 159
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+GL Y + + +S Y + SN +D+ +
Sbjct: 160 --------PTAGLGLSYQITHALSTQIGADYY----QDLRTSNGHADLTQAYW------- 200
Query: 235 SLGINMHF 242
G+ F
Sbjct: 201 --GMTYKF 206
>gi|77166271|ref|YP_344796.1| hypothetical protein Noc_2819 [Nitrosococcus oceani ATCC 19707]
gi|76884585|gb|ABA59266.1| hypothetical protein Noc_2819 [Nitrosococcus oceani ATCC 19707]
Length = 397
Score = 39.0 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 31/108 (28%), Gaps = 11/108 (10%)
Query: 104 FGINCHTTAAKDD-----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+GI K + G + + D L+ Y +
Sbjct: 62 WGIEFAYDYIKTNLLQTSGKKAGDYATTTWLGQLRFRYPLLQDRLVPYLLA-----GGGI 116
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
E ++ G D V+G G +Y + +I+L +Y
Sbjct: 117 GIGEFSGREDFSFTGGGSDTVPLG-VVGGGAEYFITDNIALGVEAKYY 163
Score = 38.6 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 18/191 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD- 115
Y+ L + T A +++S +G N + +G+ +
Sbjct: 219 GYLSLRGGVAFLTDRNAVP--EASFDSTSGPWPSGSIGMNF---NKHWGVELAGDYGRTQ 273
Query: 116 --DSTFYRLKEKYFIYGDVVLKAGYSV--DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
++ + + Y + D L Y + G G + ++ S +
Sbjct: 274 LRSPVLGKITGYPIWTISALGRFRYPLLNDKLSPYLLAGPGLGFAEIGDPDQPLSVTGLS 333
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G G+DY + Y+++ + + + N+ K + +
Sbjct: 334 GGQDNSIVA---IFGAGVDYFIGYNVAFNLEVK-----RAAFFNTQVKINGQSETLSPEF 385
Query: 232 HIASLGINMHF 242
+ GI + F
Sbjct: 386 VSLTAGIRVFF 396
>gi|607899|gb|AAA87400.1| opacity-related protein [Neisseria flava]
gi|1095253|prf||2108298B opacity protein
Length = 257
Score = 39.0 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 53/232 (22%), Gaps = 60/232 (25%)
Query: 56 GNYVGLHISRLYETHPLADTIN----RKTYNSLLPNGLGIELGHNIQLEDFVFGIN---- 107
G YV ++ YE + Y + L ++ ++
Sbjct: 41 GPYVQADLNYAYEHITHDYPGDNAKVFDDYRDVKTQSTHPRLSVGYDFGNWRIALDYARY 100
Query: 108 ----------CHTTAAKDDSTFYRLKEKYF----IYGDVVLKAGYSVD---------SLL 144
T + K G ++ Y +
Sbjct: 101 NTWRHGKHIHAENTKTITPPQGKPVDTKTEIDHTDKGTFKAESNYGISAIYDFDTGTRFK 160
Query: 145 IYGMGGFGGAYVIDSSL--------------EKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
Y G + S + + G V G+G+D
Sbjct: 161 PYVGARVGLGKIKHSIAVEDQLTLTIANIKKGPTDLHPPLHQSHSIRRVGFGAVAGVGID 220
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +++L YRY + + H ASLG+ F
Sbjct: 221 --ITPNLTLDTGYRYHYWGHLE-------------NTRFKTHEASLGVRYRF 257
>gi|260428670|ref|ZP_05782648.1| rb142 [Citreicella sp. SE45]
gi|260420264|gb|EEX13516.1| rb142 [Citreicella sp. SE45]
Length = 721
Score = 39.0 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 38/150 (25%), Gaps = 18/150 (12%)
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY--GMGGFGGAYVIDSSLEKVES 166
+ Y + K +G + G Y G + ES
Sbjct: 137 DFGGTGIYAGEYVVATKT--FGRLRATGGIGWGRFGSYNGFSNPLGFLSDTLDDRPEPES 194
Query: 167 DNSKNAKGRFDGHGSS-VVLGIGLDYMVNYDISLSASYRYIPHHIHS--VNNSNAKSDVE 223
+ K + GL Y VN + LSA Y + S ++ A
Sbjct: 195 GIGQTGKLDTEHWFRGDAAFFGGLQYAVNDRLVLSAEYSSDAYESESDRMDFDRASPFNF 254
Query: 224 RVDRKGNAH-----------IASLGINMHF 242
+ H ++G+ F
Sbjct: 255 GATYRIQDHFDVSAAWLYGSTFAVGLRYTF 284
>gi|238764928|ref|ZP_04625867.1| Attachment invasion locus protein [Yersinia kristensenii ATCC
33638]
gi|238696869|gb|EEP89647.1| Attachment invasion locus protein [Yersinia kristensenii ATCC
33638]
Length = 225
Score = 39.0 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 48/185 (25%), Gaps = 42/185 (22%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
+ +SL + GI + + ++ + +G+ T D Y+
Sbjct: 78 LGYAQSHVK-------ANGHSLDKDHKGINVKYRYEVNN-DWGMISSFTYTDLDHDSYQG 129
Query: 123 KEKYF-----IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
K Y + + +YG+ G V S
Sbjct: 130 NTKIGEGDSRYYSLTTGPIFRINEYVSLYGLMGVAHGKVKFS-----------TPDESVS 178
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+S+ G G+ + ++ ASY Y + LG
Sbjct: 179 ASKTSMTAGTGVQFNPYPNVVFDASYEYSKLN------------------DVKVGTWILG 220
Query: 238 INMHF 242
+ F
Sbjct: 221 VGYRF 225
>gi|7443348|pir||S16612 opacity protein opaE precursor - Neisseria gonorrhoeae (strain
MS11) (fragments)
Length = 258
Score = 39.0 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 24/86 (27%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + +++L A YRY
Sbjct: 186 GTTPTVYPGKNTQDAHRESDSIRRVGLGAVAGVGIDITPNLTLDAGYRYHYWGRLE---- 241
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 242 ---------NTRFKTHEASLGVRYRF 258
>gi|293608463|ref|ZP_06690766.1| DcaP protein [Acinetobacter sp. SH024]
gi|292829036|gb|EFF87398.1| DcaP protein [Acinetobacter sp. SH024]
Length = 438
Score = 39.0 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 18/140 (12%)
Query: 121 RLKEKYFIYGDVVLKAGYSVDS--LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
R K D+ + Y+ G + ++L + +
Sbjct: 220 RYDWKIDANNDLKVALEYTGSRVSAFPTLTGRYTFKQGPLTALAQAFINEKSTDVATATV 279
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYI-----------PHHIHSVNNSNAKSDVERVDR 227
S G GL Y + S+ A+Y+YI + + + NA D +
Sbjct: 280 KKVSWGAGGGLKYQLTPQQSVQANYQYIVGDQKFMPYTTQSGLANSASLNAAGDFSLNED 339
Query: 228 KGN-----AHIASLGINMHF 242
K + + ++G + F
Sbjct: 340 KTDLVMNKLNSINIGYSYKF 359
>gi|153948199|ref|YP_001400915.1| outer membrane protein W [Yersinia pseudotuberculosis IP 31758]
gi|162419475|ref|YP_001606754.1| outer membrane protein W [Yersinia pestis Angola]
gi|229894883|ref|ZP_04510061.1| outer membrane protein W [Yersinia pestis Pestoides A]
gi|152959694|gb|ABS47155.1| outer membrane protein, OmpW family [Yersinia pseudotuberculosis IP
31758]
gi|162352290|gb|ABX86238.1| outer membrane protein, OmpW family [Yersinia pestis Angola]
gi|229701978|gb|EEO89999.1| outer membrane protein W [Yersinia pestis Pestoides A]
Length = 211
Score = 39.0 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D SD D V G+DYMV+ + L+
Sbjct: 114 DKLRPYLGIGLNYTKFFDEKFNATGSDIGLTNLSVKDSW--GVAGQAGMDYMVSENWMLN 171
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ N + ++ + + + G F
Sbjct: 172 MSVWWMNIESDV--KFNLAGEEHSINTRLDPWVFMFGAGYRF 211
>gi|309380111|emb|CBX21522.1| opacity protein [Neisseria lactamica Y92-1009]
Length = 213
Score = 39.0 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 15/137 (10%)
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ + ++ Y V + G S+ + V S +
Sbjct: 92 FKAESNYGISAIYDFDTGTRFKPYAGVRVGLGKIRHSITVEDKADVKVPSVNASLPGYPK 151
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
N+ + G V G+G+D + +++L YRY
Sbjct: 152 VINNIHDNRSIRRVGFGAVAGVGID--ITPNLTLDTGYRYHNWGRLE------------- 196
Query: 226 DRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 197 NTRLKTHEASLGVRYRF 213
>gi|262190557|ref|ZP_06048799.1| outer membrane protein W precursor [Vibrio cholerae CT 5369-93]
gi|262033568|gb|EEY52064.1| outer membrane protein W precursor [Vibrio cholerae CT 5369-93]
Length = 186
Score = 39.0 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S S + D + G+DYM+N
Sbjct: 84 FGEANSTFRPYVGAGLNYTTFFDESFNGTGSSATLTDLKLDDSW--GLAANAGVDYMLND 141
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + D K N + + F
Sbjct: 142 SWFLNASVWYANIETTATYKYGG--AAQSTDVKINPWVFMIAGGYKF 186
>gi|2642263|gb|AAC45986.1| opacity protein [Neisseria meningitidis]
Length = 240
Score = 39.0 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 30/123 (24%), Gaps = 33/123 (26%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--------------------H 179
D Y +V S ++ N G +
Sbjct: 131 FDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIR 190
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 191 RLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGVR 237
Query: 240 MHF 242
F
Sbjct: 238 YRF 240
>gi|323496787|ref|ZP_08101832.1| outer membrane protein W [Vibrio sinaloensis DSM 21326]
gi|323318212|gb|EGA71178.1| outer membrane protein W [Vibrio sinaloensis DSM 21326]
Length = 215
Score = 39.0 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 32/107 (29%), Gaps = 3/107 (2%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + L Y G D + + + + +G+DYM+N
Sbjct: 112 FGQAESELRPYVGVGLNYTMFFDEGFNSEAKNAGLSDLDLENSW--GLAANLGVDYMINE 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y + + + + D + + + F
Sbjct: 170 DWFVNGSVWYADIDTKA-KFEHNVAGAQSADVSIDPWVFMISGGYKF 215
>gi|298370500|ref|ZP_06981816.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281960|gb|EFI23449.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str.
F0314]
Length = 187
Score = 39.0 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 22/200 (11%), Positives = 56/200 (28%), Gaps = 38/200 (19%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE--DFVF 104
+ G ++G V + + + + + + +N Q +++
Sbjct: 21 PLNTEGTFTGAAV--EVGAGVSKSDVKN----SSLKEKNKADVSVRGNYNTQFGASNWIG 74
Query: 105 GINCHTTAAKDDSTFYRL-KEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLE 162
G + K K + GY + + ++ YG G+
Sbjct: 75 GAEVAVKPLHRTIGENSIGKAKQKVDASASYIQGYRLTNDVMAYGKVGYHYGRFE----- 129
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
GR + + + G+G Y V ++ + A + + ++
Sbjct: 130 ---------GGGRSRTNMNGLGYGVGAKYAVTPNVEVGAEWEQTRYKKDNL--------- 171
Query: 223 ERVDRKGNAHIASLGINMHF 242
K + + + F
Sbjct: 172 -----KIHNNSYMATVGYRF 186
>gi|315497137|ref|YP_004085941.1| ompw family protein [Asticcacaulis excentricus CB 48]
gi|315415149|gb|ADU11790.1| OmpW family protein [Asticcacaulis excentricus CB 48]
Length = 219
Score = 39.0 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 12/102 (11%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y G G +S N +G L G+D + + SL+
Sbjct: 130 GRVSPYVGAGVNGMIFYNS--------KDYNGFKVELDNGLGYALQGGVDIALKGNWSLN 181
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A + + + N+ A + + N +AS+G+ F
Sbjct: 182 ADVKKVWFSTDAKINNGAL----KSEVDLNPVVASVGLAYRF 219
>gi|153216792|ref|ZP_01950616.1| outer membrane protein OmpW [Vibrio cholerae 1587]
gi|124114126|gb|EAY32946.1| outer membrane protein OmpW [Vibrio cholerae 1587]
Length = 217
Score = 39.0 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S ++N+ + D + +G DYM+N
Sbjct: 115 FGEANSTFRPYVGAGLNYTTFFDESFNSTGTNNALSDLKLDDSW--GLAANVGFDYMLND 172
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + A D + D + N + + F
Sbjct: 173 SWFLNASMWYANIETTATYKAGA--DAKSTDVEINPWVFMIAGGYKF 217
>gi|129147|sp|P09888|OMPC_NEIGO RecName: Full=Outer membrane protein P.IIC; Short=Protein IIC;
Flags: Precursor
gi|780269|emb|CAA31144.1| outer membrane preprotein PIIc [Neisseria gonorrhoeae]
Length = 270
Score = 39.0 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 24/89 (26%), Gaps = 13/89 (14%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + + + G+ + + +++L YRY
Sbjct: 195 SNGGGKVSLSSKMPPKSAHHQSNSIRRVGLGVIAGVGFDITPNLTLDTGYRYHNWGRLE- 253
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 254 ------------NTRFKTHEASLGMRYRF 270
>gi|322433237|ref|YP_004210458.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321165629|gb|ADW71331.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 438
Score = 39.0 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 47/174 (27%), Gaps = 17/174 (9%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
+ + + G+ + + + T + +
Sbjct: 38 LGYNFMRANAPPGGCPCFSLNGGYLAAGVHI-VDW------LSVEGEATGGRANDISLLG 90
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
+ I + S ++ +G FG A+ DS S + +
Sbjct: 91 QNLNLITVAAGPRVTLSGHRIVPFGEALFGIAHGSDSYFPTGTSFTTSASSFALS----- 145
Query: 183 VVLGIGLDYMVNYDISLSA---SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G GLDY +N+ ++ A Y + N N + K H+
Sbjct: 146 --AGGGLDYSINHRYAIRALDVQYLRTAFPNGNSNTQNHLMIGAGLVVKFGGHM 197
>gi|271500660|ref|YP_003333685.1| OmpW family protein [Dickeya dadantii Ech586]
gi|270344215|gb|ACZ76980.1| OmpW family protein [Dickeya dadantii Ech586]
Length = 210
Score = 39.0 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S DSL Y G D + D V GLDY +N
Sbjct: 108 FGQSTDSLRPYLGVGLNYTTFFDEKFNQTGQDAGLTDLHLKSSW--GVAAQAGLDYNLNK 165
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+ S ++ + + + + + + + G F
Sbjct: 166 NWLLNMSVWWMDIDTTVKFKAAGQD--QSIKTRLDPWVFMFGFGYKF 210
>gi|220923066|ref|YP_002498368.1| hypothetical protein Mnod_3134 [Methylobacterium nodulans ORS 2060]
gi|219947673|gb|ACL58065.1| hypothetical protein Mnod_3134 [Methylobacterium nodulans ORS 2060]
Length = 44
Score = 39.0 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 5/41 (12%), Positives = 16/41 (39%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ + ++ G+++ + ++SL Y Y+
Sbjct: 4 GARGPIGTAAGNKWKTGYLVSAGIEHALTDNLSLKGEYNYV 44
>gi|184157719|ref|YP_001846058.1| putative porin precurseur in catabolism of dicarboxylic acids
[Acinetobacter baumannii ACICU]
gi|260555414|ref|ZP_05827635.1| DcaP [Acinetobacter baumannii ATCC 19606]
gi|332876403|ref|ZP_08444172.1| hypothetical protein HMPREF0022_03825 [Acinetobacter baumannii
6014059]
gi|183209313|gb|ACC56711.1| putative porin precurseur in catabolism of dicarboxylic acids
[Acinetobacter baumannii ACICU]
gi|260411956|gb|EEX05253.1| DcaP [Acinetobacter baumannii ATCC 19606]
gi|322508027|gb|ADX03481.1| Porin precursor in catabolism of dicarboxylic acids [Acinetobacter
baumannii 1656-2]
gi|323517613|gb|ADX91994.1| putative porin precurseur in catabolism of dicarboxylic acids
[Acinetobacter baumannii TCDC-AB0715]
gi|325121803|gb|ADY81326.1| porin precurseur in catabolism of dicarboxylic acids [Acinetobacter
calcoaceticus PHEA-2]
gi|332735413|gb|EGJ66471.1| hypothetical protein HMPREF0022_03825 [Acinetobacter baumannii
6014059]
Length = 438
Score = 39.0 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 18/140 (12%)
Query: 121 RLKEKYFIYGDVVLKAGYSVDS--LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
R K D+ + Y+ G + ++L + +
Sbjct: 220 RYDWKIDANNDLKVALEYTGSRVSAFPTLTGRYTFKQGPLTALAQGFINEKSTDVATATV 279
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYI-----------PHHIHSVNNSNAKSDVERVDR 227
S G GL Y + S+ A+Y+YI + + + NA D +
Sbjct: 280 KKVSWGAGGGLKYQLTPQQSVQANYQYIVGDQKFMPYTTQSGLANSTSLNAAGDFSLNED 339
Query: 228 KGN-----AHIASLGINMHF 242
K + + ++G + F
Sbjct: 340 KTDLVMNKLNSINIGYSYKF 359
>gi|325130695|gb|EGC53435.1| opacity protein [Neisseria meningitidis OX99.30304]
Length = 232
Score = 39.0 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 30/91 (32%), Gaps = 15/91 (16%)
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
GGA V K S + G V+ G+G + + ++L YRY
Sbjct: 157 GGAKVGGKIPNKPSSKPPYHQSHSISSLGLGVIAGVG--FDITPKLTLDTGYRYHNWGRL 214
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ HF
Sbjct: 215 E-------------NTRFKTHEVSLGMRYHF 232
>gi|134294495|ref|YP_001118230.1| OmpW family protein [Burkholderia vietnamiensis G4]
gi|134137652|gb|ABO53395.1| OmpW family protein [Burkholderia vietnamiensis G4]
Length = 243
Score = 39.0 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 54/193 (27%), Gaps = 15/193 (7%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTF 119
P+ ++ + LG G+ + +FV GI T S F
Sbjct: 51 YGVGGTPVNQSVPNTGAGINDADTLGFASGYFLTDHISTEFVLGIPPKFDITGKGQFSRF 110
Query: 120 YRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGR 175
L Y V+L+ + + Y G + + E+
Sbjct: 111 GVLGRAYQWSPAVLLRYHFNDANAKFRPYVGVGATYVWFTGAKITNSTFENGVLGGPTSA 170
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ + V G Y S Y+P + + + ++ V + A IA
Sbjct: 171 TTSNQWAPVFNAGFSYNFTKHWFAGLSISYVPVSVTATFTTARRTQVGTLTETSKARIAL 230
Query: 236 ------LGINMHF 242
+ + F
Sbjct: 231 NPIVTYVNVGYRF 243
>gi|322833331|ref|YP_004213358.1| OmpW family protein [Rahnella sp. Y9602]
gi|321168532|gb|ADW74231.1| OmpW family protein [Rahnella sp. Y9602]
Length = 210
Score = 39.0 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D+ + D + D V GLDY ++ + ++
Sbjct: 113 DKLRPYLGVGINYTTFYDADFNQTGRDAGLSDLSVKDSW--GVATQAGLDYNLDDNWLIN 170
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ + + + ++ + + + G F
Sbjct: 171 MSVWWMDIDTEVKFKAGGEQ--QNINTRIDPWVFMFGAGYRF 210
>gi|253566150|ref|ZP_04843604.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265766901|ref|ZP_06094730.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|251945254|gb|EES85692.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263253278|gb|EEZ24754.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 435
Score = 39.0 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 30/104 (28%), Gaps = 22/104 (21%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
A+ F++F + + E V+ Y W Y G
Sbjct: 7 RAILFLLFSPLFGTGFAQT-------------ETPVKVDKPLKSYSHW---YFGAEYGVP 50
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
+ D + + + + G G+ Q+ ++ GI
Sbjct: 51 F---LFGDFTSFSADKTYVGSQFGGFAGY--QVNSWI-GIEASA 88
>gi|163802616|ref|ZP_02196508.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
AND4]
gi|159173699|gb|EDP58518.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
AND4]
Length = 315
Score = 39.0 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 39/185 (21%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + + + + D + LG +G+ + + F + D
Sbjct: 23 YMGGKMGKSW----VDDACVAGQACDKDGSTLGAFVGYEM---NDYFAVEAGFDNVGDFD 75
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
I + D L YG G + D
Sbjct: 76 QTSLGGHVEAITLAPKFSLPVTEDIAL-YGKVGGAYLMMNDG------------------ 116
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
S + G+++ ++ +++ A Y+ A +D+ K + A+LG
Sbjct: 117 KDDFSYLGAAGVEFNISENVTARAEYQ-------------AITDISNDAVKAMGNSATLG 163
Query: 238 INMHF 242
+ F
Sbjct: 164 VAFKF 168
>gi|229513209|ref|ZP_04402674.1| CymA protein precursor [Vibrio cholerae TMA 21]
gi|229349619|gb|EEO14574.1| CymA protein precursor [Vibrio cholerae TMA 21]
Length = 344
Score = 39.0 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 34/147 (23%), Gaps = 12/147 (8%)
Query: 99 LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD---VVLKAGYSVDSLLIYGMGGFGGAY 155
++ G+ + ++ + + YS D G A
Sbjct: 207 FGNWELGVELYYQIKDNEDRQANGGINEISDFNEKYIEPIVQYSFDD------AGVLYAR 260
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
V E + NS D +G + V L Y Y
Sbjct: 261 VRVGKNETNNAANSGGGNANVDYFKDIRKATLGYEQSVGDSWLLKGEYEYANEVEEKSKL 320
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ E + H F
Sbjct: 321 AGWEAKNES---ELKQHTVYFQALYRF 344
>gi|220924419|ref|YP_002499721.1| porin opacity type [Methylobacterium nodulans ORS 2060]
gi|219949026|gb|ACL59418.1| porin opacity type [Methylobacterium nodulans ORS 2060]
Length = 279
Score = 39.0 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 53/221 (23%), Gaps = 35/221 (15%)
Query: 55 SGNYVGLHISRLYETHPLADTINRK------TYNSLLPNGLGIELGHNIQL---EDFVFG 105
+G Y+ + P DT+ G G +G+ DF
Sbjct: 46 TGWYLRGDFTASDFHKPGDDTLPGTPGAKLVDLRLSSTQGYGGGIGYRFNSFLRADFTVD 105
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY--------SVDSLLIYGMGGFGGAYVI 157
+ S ++ G + + G + Y G G A
Sbjct: 106 ARSRSRFHDYSSRTGFVEGFNEEAGKLDVLTGLFNVYADLGTWWGFTPYIGAGVGFAEKR 165
Query: 158 DSSLEKVESDNSKNAK----------------GRFDGHGSSVVLGIGLDYMVNYDISLSA 201
S + + + GL Y + +S+ A
Sbjct: 166 FHSAWTRTTCLTVTCGDTQPIYAIGPQAVDLRANHSVTTFAWAAMAGLSYEIGKGVSIDA 225
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SYRY+ + + + +G+ F
Sbjct: 226 SYRYLDIGKARTGFDAYGYNTRLKNITADE--FRIGLRWAF 264
>gi|83860064|ref|ZP_00953584.1| outer membrane protein [Oceanicaulis alexandrii HTCC2633]
gi|83852423|gb|EAP90277.1| outer membrane protein [Oceanicaulis alexandrii HTCC2633]
Length = 228
Score = 39.0 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 10/98 (10%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G ++ + + + K+A + + +G+ Y ++ + +A R
Sbjct: 141 PYVGAGIARILFLEEQGDALADFDLKDA--------WAPAVQVGMRYQMSDNWFANADIR 192
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y P ++ I ++GI F
Sbjct: 193 YTPFETDISGTLGGAPVRGKISVDPT--ILNIGIAYRF 228
>gi|258621815|ref|ZP_05716846.1| Long-chain fatty acid transport protein [Vibrio mimicus VM573]
gi|258626239|ref|ZP_05721086.1| Long-chain fatty acid transport protein [Vibrio mimicus VM603]
gi|262165282|ref|ZP_06033019.1| long-chain fatty acid transport protein [Vibrio mimicus VM223]
gi|258581291|gb|EEW06193.1| Long-chain fatty acid transport protein [Vibrio mimicus VM603]
gi|258586046|gb|EEW10764.1| Long-chain fatty acid transport protein [Vibrio mimicus VM573]
gi|262024998|gb|EEY43666.1| long-chain fatty acid transport protein [Vibrio mimicus VM223]
Length = 424
Score = 39.0 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 27/96 (28%), Gaps = 8/96 (8%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y + G + ++ ++ + IG Y +N D +L A Y Y
Sbjct: 280 YSVQWIGWSAFDQIEFRNLQGSPLGSSYDKPYKWQDGWHYAIGGTYYLNNDWTLRAGYMY 339
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ S + + S G H
Sbjct: 340 --------DTSAQDALTSISVPDSDRQWVSAGFTYH 367
>gi|308186183|ref|YP_003930314.1| Outer membrane protein X precursor [Pantoea vagans C9-1]
gi|308056693|gb|ADO08865.1| Outer membrane protein X precursor [Pantoea vagans C9-1]
Length = 170
Score = 38.6 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 39/141 (27%), Gaps = 9/141 (6%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
+ + Y + G L + + G T + D T +
Sbjct: 18 AGSAMAQSTVTGGYAQSDYQGVANKANGFNLKYRYEDGSNPLGWIGSFTYTEKDRTEAGI 77
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
K YG A D IYG+ G G N ++ + D
Sbjct: 78 YNKGQYYGVTGGPAFRLNDWASIYGVVGIGYGKFQ---------QNDTASRAKTDSSDVG 128
Query: 183 VVLGIGLDYMVNYDISLSASY 203
G GL + D++L Y
Sbjct: 129 FSYGAGLQFNPIQDVALDVGY 149
>gi|37675747|ref|NP_936143.1| hypothetical protein VVA0088 [Vibrio vulnificus YJ016]
gi|37200286|dbj|BAC96113.1| hypothetical protein [Vibrio vulnificus YJ016]
Length = 240
Score = 38.6 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 62/207 (29%), Gaps = 34/207 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH--NIQLEDFVFGINCHTTAA 113
G Y+G S + ++ D Y + P +G+ +G Q D+ F + +
Sbjct: 40 GFYLGTDQSVSFYSYQSDDLEQDHLY-DVSPKKVGVGIGATLGYQFIDW-FALEAGVSYW 97
Query: 114 KDDSTFYRLKEKYFI-----------YGDVVLKAGYSV-----DSLLIYGMGGFGGAYVI 157
+ + YF + L G + L +YG
Sbjct: 98 LANPINQTVSYSYFEGHLDKAIISLETQSLNLNIGPKFSWRVANQLSLYGKPTLHYTTTS 157
Query: 158 ---DSSLEKVESDNSKNAKGRFDGHGSSVV---LGIGLDYMVNYDISLSASYRYIPHHIH 211
D D+ +S V + +G ++ S++ SY+Y+
Sbjct: 158 TNWDQYTASYIDDSLIMTTNERKKTRNSSVHSGIEVGSEWHFTPRFSMTLSYQYL----- 212
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGI 238
D + ++ + +G+
Sbjct: 213 ---TDALYVDSPEIKKEFDQQAIKIGV 236
>gi|330894833|gb|AEC47881.1| Omp1 [Moritella viscosa]
gi|330894835|gb|AEC47882.1| Omp1 [Moritella viscosa]
Length = 196
Score = 38.6 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 47/158 (29%), Gaps = 27/158 (17%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG Y+G T D N L G+ Q V I T
Sbjct: 26 SGFYLG---GGAGSTTVNLDEKNYAFDEDTDGKTLKFITGY--QFNRIV-AIEAQYTKYG 79
Query: 115 DDSTFYRLKEKYFIY------GDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
+ + L +Y V GY+ + L +G+ G + S
Sbjct: 80 EITPDKNLTRDGKLYTWDATTFSVSANLGYTFQNGLRPFGIIGLSSLDLGQS-------- 131
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASY 203
+K D + +V LG GL+Y +S Y
Sbjct: 132 ----SKSLKDDNAIAVHLGAGLEYTPAALSGVSFRVGY 165
>gi|320157913|ref|YP_004190291.1| hypothetical protein VVM_00173 [Vibrio vulnificus MO6-24/O]
gi|319933225|gb|ADV88088.1| hypothetical protein VVMO6_03066 [Vibrio vulnificus MO6-24/O]
Length = 222
Score = 38.6 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 61/207 (29%), Gaps = 34/207 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH--NIQLEDFVFGINCHTTAA 113
G Y+G S + ++ D Y + P +G+ +G Q D+ F + +
Sbjct: 22 GFYLGTDQSVSFYSYQSDDLEQDHLY-DVSPKKVGVGIGATLGYQFIDW-FALEAGVSYW 79
Query: 114 KDDSTFYRLKEKYFI-----------YGDVVLKAGYSV-----DSLLIYGMGGFGGAYVI 157
+ + YF + L G + L +YG
Sbjct: 80 LANPINQTVSYSYFEGHLDKAIISLETQSLNLNIGPKFSWRVANKLSLYGKPTLHYTTTS 139
Query: 158 DS---SLEKVESDNSKNAKGRFDGHGSSVV---LGIGLDYMVNYDISLSASYRYIPHHIH 211
D+ +S V + +G ++ S++ SY+Y+
Sbjct: 140 TDWDQYTASYIDDSLIMTTNERKKTRNSSVHSGIEVGSEWHFTPRFSMTLSYQYL----- 194
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGI 238
D + ++ + +G+
Sbjct: 195 ---TDALYVDSPEIKKEFDQQAIKIGV 218
>gi|54293716|ref|YP_126131.1| hypothetical protein lpl0769 [Legionella pneumophila str. Lens]
gi|53753548|emb|CAH15003.1| hypothetical protein lpl0769 [Legionella pneumophila str. Lens]
Length = 212
Score = 38.6 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 54/199 (27%), Gaps = 28/199 (14%)
Query: 56 GNYVGLHISRLY---ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
G Y Y + A + R G +G+ Q + +
Sbjct: 24 GWYASAFGGYTYIPPNIYNFAYGVFRDEVGYNNGYNAGGRIGY--QSNPIRYEVEYTYLR 81
Query: 113 AKDDSTFYRLKEKYFIYG-----DVVLKAGYSVDSLLI----YGMGGFGGAYVIDSSLEK 163
+ + + G ++ Y +L + G G A +
Sbjct: 82 GEARKFNLNFITQLGVTGFTSANTIMANIYYDCPDMLPAIAPFIGLGIGYASLRTEL--- 138
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + + +G+ Y + + + + +YRYI S
Sbjct: 139 DSIGPFRPSYFTTSDSAFAYQGTVGITYNFSENYAANLAYRYIATDNSS----------- 187
Query: 224 RVDRKGNAHIASLGINMHF 242
+ AH+AS+G F
Sbjct: 188 NFGKTYQAHLASVGAIYRF 206
>gi|317403170|gb|EFV83694.1| outer membrane protein [Achromobacter xylosoxidans C54]
Length = 213
Score = 38.6 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G + + +++ + G V +G D ++ ++A RYI
Sbjct: 127 YIGVGINYTKFFDTKAEGALKGSDLKLGDSWGVAAQLGADIKISERWFMNADIRYIDIKS 186
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N + N +A+LG+ F
Sbjct: 187 KVKLNGEHIGTA-----RINPWVATLGVGYRF 213
>gi|262171946|ref|ZP_06039624.1| long-chain fatty acid transport protein [Vibrio mimicus MB-451]
gi|261893022|gb|EEY39008.1| long-chain fatty acid transport protein [Vibrio mimicus MB-451]
Length = 424
Score = 38.6 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 27/96 (28%), Gaps = 8/96 (8%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y + G + ++ ++ + IG Y +N D +L A Y Y
Sbjct: 280 YSVQWIGWSAFDQIEFRNLQGSPLGSSYDKPYKWQDGWHYAIGGTYYLNNDWTLRAGYMY 339
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ S + + S G H
Sbjct: 340 --------DTSAQDALTSISVPDSDRQWVSAGFTYH 367
>gi|254498213|ref|ZP_05110960.1| OmpW family protein [Legionella drancourtii LLAP12]
gi|254352568|gb|EET11356.1| OmpW family protein [Legionella drancourtii LLAP12]
Length = 210
Score = 38.6 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 30/98 (30%), Gaps = 9/98 (9%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G + + + V + G L IG D+ N + SL+ +
Sbjct: 121 PYVGVGINYTHFYNVTNGPV-------SLSTHYGDSVGPALQIGADFAFNNNWSLNVDVK 173
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + N R N I LG+ F
Sbjct: 174 QVFMKSNV--HVNTPLGQLRTHVTINPVIVGLGLGYRF 209
>gi|84514980|ref|ZP_01002343.1| hypothetical protein SKA53_12188 [Loktanella vestfoldensis SKA53]
gi|84511139|gb|EAQ07593.1| hypothetical protein SKA53_12188 [Loktanella vestfoldensis SKA53]
Length = 215
Score = 38.6 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 62/201 (30%), Gaps = 26/201 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKT--YNSLLPNGLGIELGHNIQLEDF---VFGINCHTT 111
Y G + + D++ + S + + I++ + VFG
Sbjct: 26 FYGGAQSAPASDVVIRDDSVIPDSNFSQSWEGRSASAPIYYGIRVTRWQSPVFGFGLDLA 85
Query: 112 AA------KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL----IYGMGGFGGAYVIDSSL 161
T + + E + + A ++L Y GG G A +
Sbjct: 86 HNKIYPKDDVLPTGFSVLEFTDGLNTLTVNAYRRWPNMLGDVTPYVGGGLGLA------I 139
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
VE + + + G + G Y ++ S+ Y+ +N
Sbjct: 140 PHVEVTHGASETFGYQLTGPAATWIAGARYPISDQWSVFGEYK-----GTFTSNVGELDT 194
Query: 222 VERVDRKGNAHIASLGINMHF 242
+++ + +LG++ +F
Sbjct: 195 GGKIETDVFTNAVNLGVSFNF 215
>gi|330991355|ref|ZP_08315306.1| Putative outer-membrane protein y4mB [Gluconacetobacter sp. SXCC-1]
gi|329761374|gb|EGG77867.1| Putative outer-membrane protein y4mB [Gluconacetobacter sp. SXCC-1]
Length = 266
Score = 38.6 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 34/101 (33%), Gaps = 5/101 (4%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
L Y G + + + + N+ + G+DY + + +
Sbjct: 171 RLNPYVGVGGTFMWFHNMNASGALGLSKLNSGFT-----GGPSINAGVDYQLVGNWFFNF 225
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + +H+ ++++S + + + S GI F
Sbjct: 226 DVKQMFVRMHAWAENSSESLKVKAHDSLDPTVVSAGIAYRF 266
>gi|187931912|ref|YP_001891897.1| outer membrane protein FopA [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712821|gb|ACD31118.1| outer membrane protein FopA [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 392
Score = 38.6 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 16/145 (11%), Positives = 47/145 (32%), Gaps = 9/145 (6%)
Query: 99 LEDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ + G++ + + + + Y+ ++ G G
Sbjct: 73 IGQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFS 132
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
++++ + + +G GL + ++ ++ S YRYI +
Sbjct: 133 NNTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTM 184
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
A S++ + + ++ G+ F
Sbjct: 185 APSNISGANGRAGTNMIGAGLTWFF 209
>gi|12382089|gb|AAG53017.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 38.6 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G + +G++Y V ++ Y+++ N D
Sbjct: 14 ADATQGNPTYGRISNHDTGVFPLAAVGVEYAVTKNMGNPLDYQWV----------NNIGD 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + S+G++ F
Sbjct: 64 AGTVGASPDNSMLSVGVSYRF 84
>gi|227356398|ref|ZP_03840786.1| RTX toxin RtxA [Proteus mirabilis ATCC 29906]
gi|227163508|gb|EEI48429.1| RTX toxin RtxA [Proteus mirabilis ATCC 29906]
Length = 2821
Score = 38.6 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 15/122 (12%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G + + +DT +++ G G +LG + + +FG +
Sbjct: 2477 GAYLGDN--NNFWGGRGSDTFYATGISNIFTGGYGNDLGVLMGRSNMMFGGDGD------ 2528
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
D+ + GD +D ++G GG + + N +
Sbjct: 2529 DTAIIAGRINNVYLGD-------GLDKAFVFGEGGEIHTNAGNDYAVTTGNYNRIFSGSE 2581
Query: 176 FD 177
D
Sbjct: 2582 QD 2583
>gi|270157505|ref|ZP_06186162.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289164109|ref|YP_003454247.1| hypothetical protein LLO_0765 [Legionella longbeachae NSW150]
gi|269989530|gb|EEZ95784.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288857282|emb|CBJ11109.1| hypothetical protein LLO_0765 [Legionella longbeachae NSW150]
Length = 247
Score = 38.6 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 28/99 (28%), Gaps = 6/99 (6%)
Query: 143 LLIYGMG--GFGGAYVIDSSLEKVESDNSKNA-KGRFDGHGSSVVLGIGLDYMVNYDISL 199
+ + G G G + + + + +G+GL +N +
Sbjct: 144 AMPWVSGSIGVGFNDAHGFNNTPIIFEALPTPNFASHTETSFTYTVGVGLQKALNDHWQV 203
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
Y + + + ++ + H + G+
Sbjct: 204 GVGYEFADWGKSRLGRAEDQTLNSGLSL---NHFYTNGV 239
>gi|262278700|ref|ZP_06056485.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262259051|gb|EEY77784.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 438
Score = 38.6 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 42/140 (30%), Gaps = 18/140 (12%)
Query: 121 RLKEKYFIYGDVVLKAGYSVDS--LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
R K D+ + Y+ G + ++L + +
Sbjct: 220 RYDWKIDANNDLKVALEYTGSRVSAFPSLTGRYTFKQGPLTALAQGFINEKSADVATATV 279
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYI-----------PHHIHSVNNSNAKSDVERVDR 227
S G GL Y + S+ A+Y+YI + + + NA D +
Sbjct: 280 KKVSWGAGGGLKYQLTPQQSVQANYQYIVGDQKFMPYTTQSGLANSTSLNAAGDFSLNEE 339
Query: 228 KGN-----AHIASLGINMHF 242
K + + ++G F
Sbjct: 340 KTDLVMNKLNSVNIGYTYKF 359
>gi|57339654|gb|AAW49814.1| hypothetical protein FTT0583 [synthetic construct]
Length = 428
Score = 38.6 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 101 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 160
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 161 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 212
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 213 PSNISGANGRAGTNMIGAGLTWFF 236
>gi|328953583|ref|YP_004370917.1| hypothetical protein Desac_1898 [Desulfobacca acetoxidans DSM
11109]
gi|328453907|gb|AEB09736.1| hypothetical protein Desac_1898 [Desulfobacca acetoxidans DSM
11109]
Length = 281
Score = 38.6 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 25/208 (12%), Positives = 51/208 (24%), Gaps = 24/208 (11%)
Query: 57 NYVGLHISRL------YETHPLADTINRK----TYNSLLPNGLGIELGHNIQLEDFVFGI 106
Y G + + + + + G++ G + G+
Sbjct: 70 WYWGGYAGAAILPSQDWTFSKGFNPPLKGLTAQDVSLQPGVTGGMKFGRFFDSLPW-LGV 128
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY-----GMGGFGGAYVIDSSL 161
T +K + + V D I+ + +G ++
Sbjct: 129 ELETNFSKHIIKEQNVTLSQPLP-SGVGNVLIPRDRFYIWCLQTNILARYGFLPTKETPF 187
Query: 162 EKVESDNSKNAKGR------FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+++ +V GL +M +IS+ Y++
Sbjct: 188 GRLQPYVGIGPGFEVLYGVTDSAKNFAVETLTGLRFMAAANISIFCEYKFSYQFNAEYER 247
Query: 216 SNAKSD-VERVDRKGNAHIASLGINMHF 242
D V V H G HF
Sbjct: 248 KQIPPDQVGIVSFDVPNHRLVFGFTYHF 275
>gi|5230849|gb|AAD41045.1|AF114793_5 putative outer membrane protein [Vitreoscilla sp. C1]
Length = 191
Score = 38.6 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 48/157 (30%), Gaps = 19/157 (12%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
G+ +N Q + +G+ + T + +Y + V YS Y +
Sbjct: 50 GVTAKYNYQFDQQPWGVMTNLTYMG-GKQRNNITSSNQLYENDVDVDYYSAGVGPSYRIN 108
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRF----DGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y + + K + D ++V+ G G+ Y + S+ Y
Sbjct: 109 PNVNVYGVVGVAKADTKGTQKQNRTGRIYNIDNIDTNVMYGAGVQYNPAPNWSVDVGY-- 166
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S V K + + ++G+ F
Sbjct: 167 ------------ESSRVNDGYDKRSMNAFNVGVGYRF 191
>gi|332991536|gb|AEF01591.1| outer membrane protein OmpW [Alteromonas sp. SN2]
Length = 224
Score = 38.6 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 7/139 (5%)
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ + + T L E + V + + + + Y G ++ D S
Sbjct: 90 DVNFSVNDPLGTGNTLGEVTHLPPTVTVNYYFNDANAAFQPYIGAGLNYTFIFDESFTDA 149
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH-SVNNSNAKSDVE 223
+ + + +G+DY ++ + ++AS RYI + S A+ +V
Sbjct: 150 NKEAGLEDLSL--DNSVGISAQVGMDYQIDKEWHVNASVRYIDINTEASFTVGGAEGNVN 207
Query: 224 RVDRKGNAHIASLGINMHF 242
+D + S+G F
Sbjct: 208 DIDIDPWVYTLSVG--YTF 224
>gi|270158549|ref|ZP_06187206.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289166620|ref|YP_003456758.1| hypothetical protein LLO_3314 [Legionella longbeachae NSW150]
gi|269990574|gb|EEZ96828.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288859793|emb|CBJ13774.1| hypothetical protein LLO_3314 [Legionella longbeachae NSW150]
Length = 247
Score = 38.6 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 29/106 (27%), Gaps = 3/106 (2%)
Query: 140 VDSLLIYGMG--GFGGAYVIDSSLEKVESDNSKN-AKGRFDGHGSSVVLGIGLDYMVNYD 196
++ Y G G G + D S ++ G S LG G+ M+ +
Sbjct: 142 FQTVQPYLSGSFGVGWNHSHDYSSTTIDPVLFPTYWFGTSSVVAFSYTLGAGIQKMLTPN 201
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + A + ++ F
Sbjct: 202 WQVGVGAEFADWGKNYLGGDGATLNQGPGMPHLYTTELLFSLSYMF 247
>gi|240080895|ref|ZP_04725438.1| pseudogene (opacity protein) [Neisseria gonorrhoeae FA19]
gi|268597012|ref|ZP_06131179.1| opacity protein V28 [Neisseria gonorrhoeae FA19]
gi|268550800|gb|EEZ45819.1| opacity protein V28 [Neisseria gonorrhoeae FA19]
Length = 217
Score = 38.6 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 30/121 (24%), Gaps = 32/121 (26%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG-------------------HGS 181
D Y +V S ++ +
Sbjct: 110 DKFKPYIGARVAYGHVRHSIDSTKKTAKILTSSYGNGKPTVYTEENTQNAHRESDSIRRV 169
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + G+ + + ++L A YRY + + H ASLG+
Sbjct: 170 GLGVIAGVGFDITPKLTLDAGYRYHNWGRLE-------------NTRFKTHEASLGMRYR 216
Query: 242 F 242
F
Sbjct: 217 F 217
>gi|21430944|gb|AAM51157.1| outer surface protein precursor [Wolbachia endosymbiont of Formica
exsecta]
Length = 201
Score = 38.6 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 58/175 (33%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ + LG+ +++D I + + + + G + +
Sbjct: 35 GTDDVDPFKASFLGVGAAFGYKMDDIRVDIEGLYSQLNKNVNNDEVLTPDTVAGSLKAIS 94
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AYV E + G+ + G +
Sbjct: 95 GLVNVYYDIAIEDMPITPYVGVGVGAAYVSTPLKEAIN--------GQKNKFGFAYQAKA 146
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G++Y V +I L A RY + ++ +K D + A +G+ +F
Sbjct: 147 GVNYDVTPEIKLYAGARYFGSCGANFDSDASKKDKGGHAVFYSTVGAEVGVAFNF 201
>gi|2367657|gb|AAC46159.1| opacity protein [Neisseria meningitidis]
Length = 241
Score = 38.6 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 33/257 (12%), Positives = 63/257 (24%), Gaps = 56/257 (21%)
Query: 19 VPNHSLAVDLYLPRKIDL---FNEADNNVEYQDDEYGIWSGNYVGLH-------ISRLYE 68
P + A Y +I NN D + + H + +
Sbjct: 8 SPYYVQADLAYAAERITHDYPKPTGANNTSTVSDYFRN-----IRAHSIHPRVSVGYDFG 62
Query: 69 THPLA-DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
+A D + + +N + EL N + +++ + L
Sbjct: 63 GWRIAADYASYRKWNDNKYSVNTKELQRNKEHGNWIE-LKTENQGNGSFHAVSSLGLSAI 121
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVID--------------------SSLEKVESD 167
+ K D Y +V + +
Sbjct: 122 YDFKLNDK----FDKFKPYIGARIAYGHVKHQVHSVETETTIIFTTPTKGAKVGGTITHN 177
Query: 168 NSKNAKGRFDGHGSSVVLG--IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ SS+ LG G+ + + ++L YRY
Sbjct: 178 SMSKPPYHESNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE------------- 224
Query: 226 DRKGNAHIASLGINMHF 242
+ + H SLG+ F
Sbjct: 225 NTRFKTHEVSLGVRYRF 241
>gi|325202747|gb|ADY98201.1| opacity protein [Neisseria meningitidis M01-240149]
Length = 230
Score = 38.6 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 29/125 (23%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG------------- 186
D Y +V + + +K ++
Sbjct: 119 FDKFKPYIGARVAYGHVKHQVHSVRKETTTTFSKAGAGATEPGKIISGPISKPAYHESHS 178
Query: 187 ---------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G+ + + ++L YRY + + H SLG
Sbjct: 179 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 225
Query: 238 INMHF 242
+ HF
Sbjct: 226 MRYHF 230
>gi|89887404|gb|ABD78348.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia cameroni]
gi|89887406|gb|ABD78349.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia cameroni]
Length = 201
Score = 38.6 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ + +G +++D I + + + + G + +
Sbjct: 35 GTDDVDPFKASFIGGGAAFGYKMDDIRVDIEGLYSQLNKNVNNDEVLTPDTVAGSLTAIS 94
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 95 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 146
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 147 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 201
>gi|304320152|ref|YP_003853795.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
gi|303299055|gb|ADM08654.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
Length = 397
Score = 38.6 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 6/109 (5%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNS----KNAKGRFDGHGSSVVLG-IGLDYMV 193
+ L + G G AYV + + S + N+ D V G GL
Sbjct: 137 AAGRLRPFVGVGVGAAYVEANIENTIGSLPAVPSEPNSVSVDDEDYVPAVQGLAGLTLAF 196
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ YRY+ + + + +AH + G+ F
Sbjct: 197 TEQLNVDLRYRYLWLSEGEFDGFVNDGGAA-LAYEYDAHEITAGLRWDF 244
>gi|295677883|ref|YP_003606407.1| OmpW family protein [Burkholderia sp. CCGE1002]
gi|295437726|gb|ADG16896.1| OmpW family protein [Burkholderia sp. CCGE1002]
Length = 241
Score = 38.6 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 47/190 (24%), Gaps = 15/190 (7%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
P T + + +G G+ + +FV G+ + S K
Sbjct: 52 GGSPTNITEANTGASLGSADTIGFTAGYFVTDHIATEFVIGVPPTFDLSGTGSLAQFGKI 111
Query: 125 KYFIYGDVVLKAGYSVDS----LLIYGMGGFG--GAYVIDSSLEKVESDNSKNAKGRFDG 178
L Y ++ Y G + +++
Sbjct: 112 GQAKQWSPTLLFKYYFNAPTAAFRPYLGVGVSRIWFTDEHITNSSFQANVLHGPTSVSTD 171
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI----- 233
V G Y N S Y+P + NS A + V + + I
Sbjct: 172 SSWEPVFNAGFHYSFNQHWFAGVSISYLPLSTTAKLNSAATTPVGTLTVQSQTKIKLNPI 231
Query: 234 -ASLGINMHF 242
+ I F
Sbjct: 232 VTYVNIGYRF 241
>gi|238757062|ref|ZP_04618250.1| Outer membrane protein W [Yersinia aldovae ATCC 35236]
gi|238704892|gb|EEP97421.1| Outer membrane protein W [Yersinia aldovae ATCC 35236]
Length = 215
Score = 38.6 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D S+ D + GLDYMV+ + ++
Sbjct: 118 DKLRPYLGIGLNYTTFFDEKFNSTGSEAGLTDLSVKDSW--GIAGQAGLDYMVSENWMVN 175
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ + + ++ + + + G F
Sbjct: 176 MSVWWMNIESDVKFKAGGV--EQSINTRLDPWVFMFGAGYRF 215
>gi|254496044|ref|ZP_05108945.1| hypothetical protein LDG_0773 [Legionella drancourtii LLAP12]
gi|254354686|gb|EET13320.1| hypothetical protein LDG_0773 [Legionella drancourtii LLAP12]
Length = 269
Score = 38.6 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 37/134 (27%), Gaps = 5/134 (3%)
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF--GGAYVIDSSLEKVESDNSKN 171
D F+ K K + G + IY G + D ++
Sbjct: 134 SSDQFFWHYKVKNQSFLAEAKLLGMLRKQIHIYLTLGLGTAFNHAYDYTVNVPPFLTFTP 193
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ +GIG++ V + L YR+ ++ + + +
Sbjct: 194 EFTNHTETSFTYAIGIGMEADVAKNFRLGVGYRFANLGQANLGKGFLDDKIFSETLRQSN 253
Query: 232 ---HIASLGINMHF 242
H + HF
Sbjct: 254 FYMHALLAQVTWHF 267
>gi|84684753|ref|ZP_01012653.1| hypothetical protein 1099457000245_RB2654_02554 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667088|gb|EAQ13558.1| hypothetical protein RB2654_02554 [Rhodobacterales bacterium
HTCC2654]
Length = 167
Score = 38.6 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 41/152 (26%), Gaps = 18/152 (11%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK 114
G Y+G I + D +G G+N + F+ G
Sbjct: 32 GFYLGAFIQNDFAKAAGLD------------GAVGAWAGYNYGFGNGFILGAEAEVQY-- 77
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D ++ G V +AGY+ +IY GG G +
Sbjct: 78 -DWATSQVPAGSAFTGLVNARAGYATASDFMIYAKGGAGFMSGAGFIYDFGAGAEYALGG 136
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
V+G GL L Y +
Sbjct: 137 KYLVRGEVVRVMGAGLARPRTD-FKLGVGYSF 167
>gi|261251906|ref|ZP_05944480.1| hypothetical protein VIA_001927 [Vibrio orientalis CIP 102891]
gi|260938779|gb|EEX94767.1| hypothetical protein VIA_001927 [Vibrio orientalis CIP 102891]
Length = 195
Score = 38.6 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 50/171 (29%), Gaps = 13/171 (7%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY--NSLLPNGLGIELGHNIQLED-FVFGINCHTTAA 113
+ G ++ Y + +G + G++ + FV G
Sbjct: 21 AHNGFYVGAAYSKMGYSSVYKDFGSFKEQETRDGYAVNAGYDFAFGNFFVLGTELEYKDW 80
Query: 114 K-----DDSTFYRLKEKYFI--YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
D + K + +G V+ Y D IY G + +
Sbjct: 81 GGVSGIIDPNGLNIASKLDMTSFGVNVMPKMYFGDKFNIYAKAGLHNFSID---STTSTA 137
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S + +S+V G+GL Y IS +Y + + + N
Sbjct: 138 IGSNSISLASSSSDTSMVWGLGLGYDFTQHISAQTTYEVVDTDSGVIASVN 188
>gi|160872746|ref|ZP_02062878.1| putative OmpA/MotB domain protein [Rickettsiella grylli]
gi|159121545|gb|EDP46883.1| putative OmpA/MotB domain protein [Rickettsiella grylli]
Length = 191
Score = 38.6 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 55/195 (28%), Gaps = 36/195 (18%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+ YV I N + +GL L QL +
Sbjct: 25 TPFYVHGQIGYADTHIKSRLESNPANF---ANDGLAGRLSLGYQLTP-QLAVEAGYLQLS 80
Query: 115 DDSTFYRLK------EKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
++++ R K DV K + +++ +YG G + +
Sbjct: 81 NENSNERSKKGKATFSNEQYAIDVAAKGALPITNNVNVYGKLGVAYLTTKLNPNDH---- 136
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ + +G+DY + ++++ + S R
Sbjct: 137 -------EISKRKFAPEVAVGMDYDITPNVTV--------------DTSLTHIQTFGSKR 175
Query: 228 KGNAHIASLGINMHF 242
GN ++G+ +F
Sbjct: 176 PGNIDFLAVGVGYNF 190
>gi|60392865|sp|Q04882|OPAJ_NEIGO RecName: Full=Opacity protein opA58; Flags: Precursor
Length = 260
Score = 38.6 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 24/86 (27%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + +++L A YRY
Sbjct: 188 GTTPTVYPGKNTQDAHRESDSIRRVGLGAVAGVGIDITPNLTLDAGYRYHYWGRLE---- 243
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 244 ---------NTRFKTHEASLGVRYRF 260
>gi|189500373|ref|YP_001959843.1| outer surface protein, putative [Chlorobium phaeobacteroides BS1]
gi|189495814|gb|ACE04362.1| outer surface protein, putative [Chlorobium phaeobacteroides BS1]
Length = 202
Score = 38.6 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 57/194 (29%), Gaps = 28/194 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y GL + Y + G + F + K+D
Sbjct: 28 YAGLTVGLAYLNDSSLKGSKSGDLSYEDGEAFSYAHGLDF----GCFRMEGEIGYQKNDF 83
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK---- 173
Y GD+ S+L G+ + ++S+ + S A
Sbjct: 84 ATYE-PGGLDASGDL---------SILSLLANGYYYCEIPNTSVVPIISAGVGAASVELE 133
Query: 174 -----GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
D + +G GL V+ ++++A YRY S +
Sbjct: 134 EKTDDFSEDDIVLAYQVGAGLGVKVSPSVTVNAMYRYFSTQDASFQEGG-----NDIKID 188
Query: 229 GNAHIASLGINMHF 242
++H LG+ ++F
Sbjct: 189 ISSHNVLLGLKVNF 202
>gi|15601622|ref|NP_233253.1| outer membrane protein W [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|153817010|ref|ZP_01969677.1| outer membrane protein OmpW [Vibrio cholerae NCTC 8457]
gi|153822998|ref|ZP_01975665.1| outer membrane protein OmpW [Vibrio cholerae B33]
gi|153828018|ref|ZP_01980685.1| outer membrane protein OmpW [Vibrio cholerae 623-39]
gi|227812433|ref|YP_002812443.1| outer membrane protein OmpW [Vibrio cholerae M66-2]
gi|229505987|ref|ZP_04395496.1| outer membrane protein W precursor [Vibrio cholerae BX 330286]
gi|229510156|ref|ZP_04399636.1| outer membrane protein W precursor [Vibrio cholerae B33]
gi|229517713|ref|ZP_04407158.1| outer membrane protein W precursor [Vibrio cholerae RC9]
gi|229526638|ref|ZP_04416042.1| outer membrane protein W precursor [Vibrio cholerae bv. albensis
VL426]
gi|229605519|ref|YP_002876223.1| outer membrane protein W [Vibrio cholerae MJ-1236]
gi|254284498|ref|ZP_04959465.1| outer membrane protein OmpW [Vibrio cholerae AM-19226]
gi|254850025|ref|ZP_05239375.1| outer membrane protein W precursor [Vibrio cholerae MO10]
gi|255746386|ref|ZP_05420333.1| outer membrane protein W precursor [Vibrio cholera CIRS 101]
gi|262158260|ref|ZP_06029377.1| outer membrane protein W precursor [Vibrio cholerae INDRE 91/1]
gi|298499647|ref|ZP_07009453.1| outer membrane protein W [Vibrio cholerae MAK 757]
gi|14548346|sp|P17266|OMPW_VIBCH RecName: Full=Outer membrane protein W; Flags: Precursor
gi|9658299|gb|AAF96765.1| outer membrane protein OmpW [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|126512420|gb|EAZ75014.1| outer membrane protein OmpW [Vibrio cholerae NCTC 8457]
gi|126519468|gb|EAZ76691.1| outer membrane protein OmpW [Vibrio cholerae B33]
gi|148876427|gb|EDL74562.1| outer membrane protein OmpW [Vibrio cholerae 623-39]
gi|150425283|gb|EDN17059.1| outer membrane protein OmpW [Vibrio cholerae AM-19226]
gi|227011575|gb|ACP07786.1| outer membrane protein OmpW [Vibrio cholerae M66-2]
gi|229336796|gb|EEO01814.1| outer membrane protein W precursor [Vibrio cholerae bv. albensis
VL426]
gi|229345749|gb|EEO10722.1| outer membrane protein W precursor [Vibrio cholerae RC9]
gi|229352601|gb|EEO17541.1| outer membrane protein W precursor [Vibrio cholerae B33]
gi|229356338|gb|EEO21256.1| outer membrane protein W precursor [Vibrio cholerae BX 330286]
gi|229372005|gb|ACQ62427.1| outer membrane protein W precursor [Vibrio cholerae MJ-1236]
gi|254845730|gb|EET24144.1| outer membrane protein W precursor [Vibrio cholerae MO10]
gi|255736140|gb|EET91538.1| outer membrane protein W precursor [Vibrio cholera CIRS 101]
gi|262029942|gb|EEY48589.1| outer membrane protein W precursor [Vibrio cholerae INDRE 91/1]
gi|297541628|gb|EFH77679.1| outer membrane protein W [Vibrio cholerae MAK 757]
Length = 217
Score = 38.6 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S ++ + D + +G DYM+N
Sbjct: 115 FGEANSTFRPYVGAGLNYTTFFDESFNGTGTNAGLSDLKLDDSW--GLAANVGFDYMLND 172
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + A D + D + N + + F
Sbjct: 173 SWFLNASVWYANIETTATYKAGA--DAKSTDVEINPWVFMIAGGYKF 217
>gi|330894839|gb|AEC47884.1| Omp1 [Moritella viscosa]
Length = 196
Score = 38.6 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 48/158 (30%), Gaps = 27/158 (17%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG Y+G T D N L G+ Q V I T
Sbjct: 26 SGFYLG---GGAGSTTVNLDEKNYAFDEDTDGKTLKFITGY--QFNRIV-AIEAQYTKYG 79
Query: 115 DDSTFYRLKEKYFIY------GDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
+ + L +Y V GY+ + L +G+ G + S
Sbjct: 80 EITPDKNLTRDGKLYTWDATTFSVSANLGYTFQNGLRPFGIIGLSSLDLGQS-------- 131
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASY 203
+K D + ++V LG GL+Y +S Y
Sbjct: 132 ----SKALKDDNATAVHLGAGLEYTPAALSGVSFRVGY 165
>gi|323143558|ref|ZP_08078235.1| outer membrane autotransporter barrel domain protein
[Succinatimonas hippei YIT 12066]
gi|322416621|gb|EFY07278.1| outer membrane autotransporter barrel domain protein
[Succinatimonas hippei YIT 12066]
Length = 872
Score = 38.6 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 47/183 (25%), Gaps = 5/183 (2%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
N + G + G + + ++ ++ + T
Sbjct: 611 GRNGTALFAAVSGSYFNYDGDSDFSLRGYHLAAGSSFKSDNLMWSLFAETGIGSASLKEG 670
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ Y + YS ++ + Y Y+ E D + F G
Sbjct: 671 ADVDTDISYAGLGALVDYSFNNGM-YADAAVRFGYIKTDFDAVYEEDQADFVSRGFYGSI 729
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA-HIASLGIN 239
+ G G + VN RY+ + S D + + H G
Sbjct: 730 QA---GGGYRFAVNDFTKADIYIRYLGLYETSDRFGLNNKDSDNMSIDPRFAHAVRAGGE 786
Query: 240 MHF 242
+F
Sbjct: 787 FNF 789
>gi|295699207|ref|YP_003607100.1| cellulose synthase operon C domain protein [Burkholderia sp.
CCGE1002]
gi|295438420|gb|ADG17589.1| cellulose synthase operon C domain protein [Burkholderia sp.
CCGE1002]
Length = 1550
Score = 38.6 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 55/182 (30%), Gaps = 19/182 (10%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
G +S + N Y S +G+G+ +G++ +
Sbjct: 1223 FGAGLSTASSESAAVNGTN--NYGSQTASGVGLSVGYDSRSIS------GDIGVTPIGFR 1274
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+ G + K YS+ V DS L + ++
Sbjct: 1275 ETNIVGGAQYNGGITDKVSYSI---------AVARRAVTDSLLSYAGARDAGAGLEWGGV 1325
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYR-YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ V + D + ++A+Y+ Y+ ++ S N V K ++G
Sbjct: 1326 TSNGVRASLTWD-DGTSGLYVNAAYQHYMGTNVPSNNAVKGGGGVYTRLLKDADQTLTVG 1384
Query: 238 IN 239
+N
Sbjct: 1385 VN 1386
>gi|167625906|ref|YP_001676200.1| hypothetical protein Shal_4001 [Shewanella halifaxensis HAW-EB4]
gi|167355928|gb|ABZ78541.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
Length = 346
Score = 38.6 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 52/189 (27%), Gaps = 42/189 (22%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIE-LGHNIQLEDFVFGINCHTTAA 113
+G Y+ L + Y H + S+ L I LG E +++
Sbjct: 199 AGFYIDL-VGFNYRVHSGFMQTKYRQQPSVEQQKLDIYTLGAEYSYESWLWMAEVEFD-- 255
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + Y + Y+ D L Y G +
Sbjct: 256 ---------RLQTNWYASAI----YAFDYLSPYLTYGESHQLRKSKGVT----------- 291
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ Y V ISL+ Y+ I N + + D + +
Sbjct: 292 -------------AGVRYDVTSSISLNLEYQMI-FSQEEGNRAQFVTSPLVYDESSDVDL 337
Query: 234 ASLGINMHF 242
+L +N F
Sbjct: 338 VTLSVNFVF 346
>gi|114776563|ref|ZP_01451608.1| hypothetical protein SPV1_02547 [Mariprofundus ferrooxydans PV-1]
gi|114553393|gb|EAU55791.1| hypothetical protein SPV1_02547 [Mariprofundus ferrooxydans PV-1]
Length = 187
Score = 38.6 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 49/182 (26%), Gaps = 20/182 (10%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE---DFVFGINCHTTAAKDDSTFYRL 122
+ + N G +Q+ FG A ++
Sbjct: 21 AWAAGSHYVGLGAGAINLGNGLNKKAVFGSYLQIGHHFSEYFGAEVRLGATASQTSNLPA 80
Query: 123 KEKYF-IYGDVVLKAGYSVDSLLI-YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
K + LK Y + L Y + GF + + +
Sbjct: 81 PAKRRMDFVAHYLKPQYPFTTNLTGYALIGFAVVHTTY----------QPTGGTKQSKNR 130
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
G+GLDY +N D S + ++ N + + + A + + +
Sbjct: 131 IGYAYGLGLDYQLNDDYSAGIEWSHM-----LSKPKNTAATISTNFKGLEASLFTAAVRY 185
Query: 241 HF 242
HF
Sbjct: 186 HF 187
>gi|120608863|ref|YP_968541.1| OmpW family protein [Acidovorax citrulli AAC00-1]
gi|120587327|gb|ABM30767.1| OmpW family protein [Acidovorax citrulli AAC00-1]
Length = 255
Score = 38.6 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 31/103 (30%), Gaps = 9/103 (8%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y G V++S V + + +G VL G + ++ S
Sbjct: 161 GPVRPYIGAGINYTLVLESRDGFVSNLDV--------KNGVGPVLQAGFEVPIDPRWSFF 212
Query: 201 ASYRYIPHHIHSVNNSNAKSDVER-VDRKGNAHIASLGINMHF 242
+ I + A + + + + G++ F
Sbjct: 213 VDAKKIWLKTTATGTLPALGGAPAHAKVRLDPLVVTAGVSYRF 255
>gi|27367636|ref|NP_763163.1| hypothetical protein VV2_1259 [Vibrio vulnificus CMCP6]
gi|27359208|gb|AAO08153.1| hypothetical protein VV2_1259 [Vibrio vulnificus CMCP6]
Length = 222
Score = 38.6 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 62/207 (29%), Gaps = 34/207 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH--NIQLEDFVFGINCHTTAA 113
G Y+G S + ++ D Y + P +G+ +G Q D+ F + +
Sbjct: 22 GFYLGTDQSVSFYSYQSDDLEQDHLY-DVSPKKVGVGIGATLGYQFIDW-FALEAGVSYW 79
Query: 114 KDDSTFYRLKEKYFI-----------YGDVVLKAGYSV-----DSLLIYGMGGFGGAYVI 157
+ + YF + L G + L +YG
Sbjct: 80 LANPISQTVSYSYFEGHLDKAIISLETQSLNLNIGPKFSWRVANKLSLYGKPTLHYTTTS 139
Query: 158 ---DSSLEKVESDNSKNAKGRFDGHGSSVV---LGIGLDYMVNYDISLSASYRYIPHHIH 211
D D+ +S V + +G ++ S++ SY+Y+
Sbjct: 140 TNWDQYTASYIDDSLIMTTNERKKTRNSSVHSGIEVGSEWHFTPRFSMTLSYQYL----- 194
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGI 238
D + ++ + +G+
Sbjct: 195 ---TDALYVDSPEIKKEFDQQAIKIGV 218
>gi|88812432|ref|ZP_01127681.1| outer membrane protein [Nitrococcus mobilis Nb-231]
gi|88790218|gb|EAR21336.1| outer membrane protein [Nitrococcus mobilis Nb-231]
Length = 435
Score = 38.6 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 20/190 (10%)
Query: 59 VGLHISRLYETHPLADTINRKTYN---SLLPNGLGIELGH-NIQLEDFVFGINCHTTAAK 114
VG + Y L + I+ T L G + G + +D+ FG N
Sbjct: 161 VGAGLIAQYANARLTNAIDFGTIGAAQGLPGANPGNQDGFARVTGDDWGFGFNLGALYEL 220
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+T + + + + KA + D I G ++ K + A
Sbjct: 221 TPNTRIGIAYRSKVEHTLKGKASFDPDQAGIANTLGAALGGAFTDTVGKADLTTPATAS- 279
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---HHIHSVNNSNAKSDVERVDRKGNA 231
+G+ + ++L A ++ V N + + +
Sbjct: 280 ------------LGVLHQATKRLALMAEVQWTNWSEFGRLVVKFDNNTPNSVTDNDWQDT 327
Query: 232 HIASLGINMH 241
AS+G +
Sbjct: 328 WFASIGASYR 337
>gi|332828007|gb|EGK00729.1| hypothetical protein HMPREF9455_03003 [Dysgonomonas gadei ATCC
BAA-286]
Length = 439
Score = 38.6 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 57/186 (30%), Gaps = 30/186 (16%)
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR-------LKEKY 126
+ + + LP G+ + +I + G+ T S F + +++
Sbjct: 267 NVNDFSEIDHSLPLSFGVNVRKDI---NRYIGVETGLTYTYLSSKFQKKAIKSLEARQEL 323
Query: 127 FIYGDVVLKAGYSVD--SLLIYGMGG------FGGAYVIDSSLEKVESDNSKNAKGRFDG 178
G V Y + + IY G Y D +K S + KG G
Sbjct: 324 HYLGIPVNVVLYLWNSSNWNIYLSAGGMVEKGLTYKYTEDIY-DKNNSAAVVHDKGSISG 382
Query: 179 HGSSVVLGIGLDYMVNYDISLSAS--YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
S+ +G YM D S+ + Y + ++ K V +
Sbjct: 383 LQWSLNASLGASYMFYNDWSIYFEPRFSYYFDNKQPISIRTEKPSVFGLG---------A 433
Query: 237 GINMHF 242
G+ F
Sbjct: 434 GLRYKF 439
>gi|239995821|ref|ZP_04716345.1| outer membrane protein OmpW [Alteromonas macleodii ATCC 27126]
Length = 223
Score = 38.6 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 5/99 (5%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G ++ D + + + + +G+DY ++ L+A+ R
Sbjct: 129 PYVGAGLNYTFIYDEQFTGANEEAGLSDLSL--DNSFGLAAQVGIDYQLSERWFLNAAVR 186
Query: 205 YIPHHIH-SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+I S N + + V ++ + SLG F
Sbjct: 187 WIDIDTEASFNLGDTRGSVSAIEIDPFVYAISLG--YRF 223
>gi|127513482|ref|YP_001094679.1| outer membrane protein W [Shewanella loihica PV-4]
gi|126638777|gb|ABO24420.1| OmpW family protein [Shewanella loihica PV-4]
Length = 213
Score = 38.6 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 50/176 (28%), Gaps = 14/176 (7%)
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN----CHTTAAKDDSTFYRLKEKYFI 128
D +N LG+ G+ + GI + ++ E +
Sbjct: 46 EDVAGFGEFNISSNTQLGLNFGYMLTDN---IGIELLAATPFSHDVSLKGVGKIAETKHL 102
Query: 129 YGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
+V + G + L Y G DS + +
Sbjct: 103 PPTLVAQYYFGSADSKLRPYIGAGVNFTNFFDSEFTNDLDGALTDLSLSNS---WGLAAQ 159
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+DY VN + ++AS Y + ++ D ++ S+G F
Sbjct: 160 AGIDYQVNKNWLVNASVWYAKINTDVNFKLAGQAVSIETDIDPWVYMVSVG--YTF 213
>gi|218780788|ref|YP_002432106.1| OmpW family protein [Desulfatibacillum alkenivorans AK-01]
gi|218762172|gb|ACL04638.1| OmpW family protein [Desulfatibacillum alkenivorans AK-01]
Length = 218
Score = 38.6 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 2/102 (1%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
Y G + + + +K D G +G++ V ++S
Sbjct: 119 GGFSPYIGAGLSYFFNDFDMSDFYSRNLAKGTSIDPDD-GLGFHANLGVEIDVTDNVSFD 177
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y + V S D + D + N+ G+ ++F
Sbjct: 178 IDGKYTWYEEEFVIKSPGNRDRQE-DVELNSLSIGAGMKVYF 218
>gi|325144980|gb|EGC67263.1| opacity protein [Neisseria meningitidis M01-240013]
Length = 230
Score = 38.6 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 13/89 (14%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+S + R + + G+ + + ++L YRY
Sbjct: 155 GGAKVGGTIPNKSMSKPAYHERNSISSVGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE- 213
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ HF
Sbjct: 214 ------------NTRFKTHEVSLGMRYHF 230
>gi|319775658|ref|YP_004138146.1| Opacity-related protein [Haemophilus influenzae F3047]
gi|317450249|emb|CBY86465.1| Opacity-related protein precursor [Haemophilus influenzae F3047]
Length = 220
Score = 38.6 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 13/52 (25%)
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + +I+L YRY + + H AS G+ F
Sbjct: 182 YDITPNITLDLGYRYNDWGRLE-------------NVRFKTHEASFGVRYRF 220
>gi|46915653|emb|CAG22425.1| hypothetical protein PBPRB0552 [Photobacterium profundum SS9]
Length = 213
Score = 38.6 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 49/163 (30%), Gaps = 19/163 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN---SLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
YVGL I + + + G +G N FV I A
Sbjct: 42 GYVGLEIGKQESSALKSLNNKYCQSGECVDEDTFSFGGLVGFN--FNKFV-AIEGAAQFA 98
Query: 114 KDDSTFYRLKEKYFIY------GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
K D FY + I GDV + YS+ L Y + +V S
Sbjct: 99 KYDYDFYTARYNSSIPSLYRHKGDVKVTT-YSLGPKLQYPVNDIISFFVKPSIAYTKT-- 155
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ A D LG ++ + +L ASY +
Sbjct: 156 --EAAGESEDSADFMYTLGA--EFSLTSYAALRASYESVDTDS 194
>gi|254672740|emb|CBA06731.1| Opacity protein and related surface antigens [Neisseria
meningitidis alpha275]
Length = 233
Score = 38.6 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 28/124 (22%), Gaps = 34/124 (27%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------------------- 180
D Y +V + + +K
Sbjct: 123 FDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSATKPGQIPSLVTKPAYHESHSI 182
Query: 181 --SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 183 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 229
Query: 239 NMHF 242
F
Sbjct: 230 RYRF 233
>gi|288549700|ref|ZP_05967904.2| putative outer membrane autotransporter barrel domain protein
[Enterobacter cancerogenus ATCC 35316]
gi|288317967|gb|EFC56905.1| putative outer membrane autotransporter barrel domain protein
[Enterobacter cancerogenus ATCC 35316]
Length = 1105
Score = 38.6 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 8/181 (4%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK 123
Y D++ + + G + N + ++++G + +
Sbjct: 830 GGGYWQQRQGDSVGYDASSYGMVFGAEKQ---NDRNHNWIYGFHGAVSGQSVTVKSPETA 886
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG--S 181
D+ + A Y + + G G + DS +++ + A G
Sbjct: 887 TGKTTAFDLGIHARYGAERSEGMYLFGTGRLGIEDSWMDRNIHVETYGANHHATWTGLTG 946
Query: 182 SVVLGIGLDYMVNYDISLS--ASYRYIPHHIHSVNNSNAKSDVERVDRK-GNAHIASLGI 238
SV G G + +N ++S S Y H V S +D + ++ +S+G+
Sbjct: 947 SVTAGGGYRWALNDNMSAGPVTSLNYTTLHRPGVKESGNDGSRLMLDSETFDSLRSSIGV 1006
Query: 239 N 239
N
Sbjct: 1007 N 1007
>gi|156976121|ref|YP_001447027.1| hypothetical protein VIBHAR_04892 [Vibrio harveyi ATCC BAA-1116]
gi|156527715|gb|ABU72800.1| hypothetical protein VIBHAR_04892 [Vibrio harveyi ATCC BAA-1116]
Length = 321
Score = 38.6 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 20/185 (10%), Positives = 47/185 (25%), Gaps = 32/185 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + + L D + G+ +G+N + + +
Sbjct: 26 YIGGKLGY----NALNDACHLDAPCDDDSFAAGMHIGYNF---NEYVAAEYGVDYLGNFT 78
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ + GD+ + + + + + +
Sbjct: 79 ANFNKAGLNTVDGDL-------------WALTLAPKFNLPLNDSWNLFAKVGAAYMMAGG 125
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+G +Y +NY+ SL A Y+ + + +G
Sbjct: 126 EKDFVPTGSLGAEYQINYNWSLRAEYQRYQDMSDDIIDDMDADFFG------------IG 173
Query: 238 INMHF 242
N F
Sbjct: 174 FNYKF 178
>gi|60683014|ref|YP_213158.1| hypothetical protein BF3556 [Bacteroides fragilis NCTC 9343]
gi|60494448|emb|CAH09244.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
Length = 445
Score = 38.6 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 30/104 (28%), Gaps = 22/104 (21%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
A+ F++F + + E V+ Y W Y G
Sbjct: 17 RAILFLLFSPLFGIGFAQT-------------ETPVKVDKPLKSYSHW---YFGAEYGVP 60
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
+ D + + + + G G+ Q+ ++ GI
Sbjct: 61 F---LFGDFTSFSADKTYVGSQFGGFAGY--QVNSWI-GIEASA 98
>gi|84386141|ref|ZP_00989170.1| hypothetical protein V12B01_18146 [Vibrio splendidus 12B01]
gi|84378911|gb|EAP95765.1| hypothetical protein V12B01_18146 [Vibrio splendidus 12B01]
Length = 189
Score = 38.6 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 48/169 (28%), Gaps = 25/169 (14%)
Query: 76 INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT-AAKDDSTFYRLKEKYFIYGDVVL 134
+ + G + G+ + + G+ A +L +
Sbjct: 44 TDGQGSLDSDGMGYNLYGGYQF---NRIVGVELGYNDYADYKKGTAKLS---PTSVSLSA 97
Query: 135 KAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
GY+ D+ + + + G + + G D G+ G+G++Y
Sbjct: 98 NLGYTFDNTIRPFVLAGLSSVDLNANKSA-----------GYADDSGTGFHFGVGVEYTP 146
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++L + ++ D+ S G + +F
Sbjct: 147 IEHLTLRL------ISQADAVSVENDYGFKKEDKTLAFSSISFGGSYNF 189
>gi|315498614|ref|YP_004087418.1| ompw family protein [Asticcacaulis excentricus CB 48]
gi|315416626|gb|ADU13267.1| OmpW family protein [Asticcacaulis excentricus CB 48]
Length = 215
Score = 38.6 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 12/102 (11%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y G +++ S + K + D G L G+D + + SL+
Sbjct: 126 GRVSPYVGAGV-------NAMIFYNSKDYNGFKVKLDD-GLGYALQGGVDIALKGNWSLN 177
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A + + + + N A + N +AS+G+ F
Sbjct: 178 ADVKKVWFNTDAKINDGAL----KSKVDLNPVVASVGLAYRF 215
>gi|134095438|ref|YP_001100513.1| putative Outer membrane protein W [Herminiimonas arsenicoxydans]
gi|133739341|emb|CAL62391.1| putative outer membrane protein OmpW-like [Herminiimonas
arsenicoxydans]
Length = 206
Score = 38.6 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 12/98 (12%), Positives = 31/98 (31%), Gaps = 13/98 (13%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G + ++ S N + + + L G+D+ ++ SL+
Sbjct: 122 PYVGAGI--------NYTRISSVKLLNGAAQLESSSVGLALQAGVDFKIDKKWSLNL--- 170
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + K + + +G+ F
Sbjct: 171 --DVKKVQIRSDVRTAAGQLSAVKIDPWLIGVGVGYRF 206
>gi|170727971|ref|YP_001761997.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169813318|gb|ACA87902.1| OmpA domain protein transmembrane region-containing protein
[Shewanella woodyi ATCC 51908]
Length = 190
Score = 38.6 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 46/160 (28%), Gaps = 6/160 (3%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + + +S+ + + + D FGI + +
Sbjct: 30 YIGGTLGYGFHEFETEKYGQASFSDSVTFDLY-----YRHMVNDN-FGIEVGGMSGSGGA 83
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ G + + L G+ A + +
Sbjct: 84 FSILSDIWNDVKGLSYRGLRTTAYARLPLGISNSLYAKAGTAYQWVDYNVRQDKETVSVS 143
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ IG ++ ++L+A Y+++P ++ + N
Sbjct: 144 ETDNGFYGAIGWEFRFRNGLALNAEYQHVPMSNLTLRSYN 183
>gi|44892|emb|CAA43119.1| opaA v18 [Neisseria gonorrhoeae]
Length = 239
Score = 38.6 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 15/80 (18%)
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ + G V G+G+D + ++L A YRY
Sbjct: 175 GPTPKPAYHKSRSISSLGFGAVAGVGID--ITPKLTLDAGYRYHNWGRLE---------- 222
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 223 ---NTRFKTHEASLGVRYRF 239
>gi|325203999|gb|ADY99452.1| opacity protein [Neisseria meningitidis M01-240355]
gi|325204450|gb|ADY99903.1| opacity protein [Neisseria meningitidis M01-240355]
Length = 229
Score = 38.6 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 27/125 (21%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV--------------- 184
D Y +V + +K V
Sbjct: 118 FDKFKPYIGARVAYGHVKHQVHSVESKNTIVTSKPTQGAAQGGPVPTGFVPKSAYHESHS 177
Query: 185 -------LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ G+ + + ++L YRY + + H SLG
Sbjct: 178 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 224
Query: 238 INMHF 242
+ F
Sbjct: 225 MRYRF 229
>gi|253701635|ref|YP_003022824.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251776485|gb|ACT19066.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 432
Score = 38.6 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 38/141 (26%), Gaps = 13/141 (9%)
Query: 65 RLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK 123
+ P L G+ LG+++ +G+ + T
Sbjct: 28 GAFSISPFLGGYTFDGDQHLKTAPVYGLRLGYDLTKN---WGVEAVADYLATEGTHNGRS 84
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
Y +D L + G Y+ + K +++
Sbjct: 85 VNA---------LSYRLDVLYNFLPDGPLVPYLAVGGGGITYGHGHEGLKVSDRTTDATI 135
Query: 184 VLGIGLDYMVNYDISLSASYR 204
G G+ Y V ++L A R
Sbjct: 136 NAGGGIKYFVTDSVALRADAR 156
>gi|148360614|ref|YP_001251821.1| opacity protein-like surface antigen [Legionella pneumophila str.
Corby]
gi|296106320|ref|YP_003618020.1| hypothetical protein lpa_01134 [Legionella pneumophila 2300/99
Alcoy]
gi|148282387|gb|ABQ56475.1| Opacity protein-like surface antigen [Legionella pneumophila str.
Corby]
gi|295648221|gb|ADG24068.1| hypothetical protein lpa_01134 [Legionella pneumophila 2300/99
Alcoy]
gi|307609527|emb|CBW99025.1| hypothetical protein LPW_08101 [Legionella pneumophila 130b]
Length = 212
Score = 38.6 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 54/199 (27%), Gaps = 28/199 (14%)
Query: 56 GNYVGLHISRLY---ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
G Y Y + A + R G +G+ Q + +
Sbjct: 24 GWYASAFGGYTYIPPNIYNFAYGVFRDEVGYNNGYNAGGRVGY--QSNPIRYEVEYTYLR 81
Query: 113 AKDDSTFYRLKEKYFIYG-----DVVLKAGYSVDSLLI----YGMGGFGGAYVIDSSLEK 163
+ + + G ++ Y +L + G G A +
Sbjct: 82 GEARKFNLNFITQLGVTGFTSANTIMANIYYDCPDMLPAIAPFIGLGIGYASLRTEL--- 138
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + + +G+ Y + + + + +YRYI S
Sbjct: 139 DSIGPFRPSYFTTSDSAFAYQGTVGITYNFSENYAANLAYRYIATDNSS----------- 187
Query: 224 RVDRKGNAHIASLGINMHF 242
+ AH+AS+G F
Sbjct: 188 NFGKTYQAHLASVGAIYRF 206
>gi|114800514|ref|YP_760698.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114740688|gb|ABI78813.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
Length = 387
Score = 38.6 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 6/105 (5%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN---AKGRFDGHGSSVVLGIGLDYMVNYDI 197
+++ Y G GGA V + +V D + G + +G+ + ++ +
Sbjct: 127 GTIVPYIGLGVGGARVDAKASNRVLVDGDDSHALNGFSDKATGIAYQGLLGVGFKLSERL 186
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ Y+Y K D H A+LG+ F
Sbjct: 187 TMDVGYKYFTVEDLDFA---GKHGGPGYDANYQDHSATLGLRYSF 228
>gi|330894841|gb|AEC47885.1| Omp1 [Moritella viscosa]
Length = 196
Score = 38.6 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 48/158 (30%), Gaps = 27/158 (17%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG Y+G T D N L G+ Q V I T
Sbjct: 26 SGFYLG---GGAGSTTVNLDEKNYAFDEDTDGKTLKFITGY--QFNRIV-AIEAQYTKYG 79
Query: 115 DDSTFYRLKEKYFIY------GDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
+ + + +Y V GY+ + L +G+ G + S
Sbjct: 80 EITPDKNITRDGKLYTWDATTFSVSANLGYTFQNGLRPFGIIGLSSLDLGQS-------- 131
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASY 203
+K D + ++V LG GL+Y +S Y
Sbjct: 132 ----SKALKDDNATAVHLGAGLEYTPAALSGVSFRVGY 165
>gi|295095674|emb|CBK84764.1| Outer membrane protein W [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 210
Score = 38.6 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 59/200 (29%), Gaps = 19/200 (9%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAK 114
G Y H + + + T+ + + G + +N QL F + +
Sbjct: 17 GAY--AHEAGEFFIRAGSATVRPTEGSDNVLGMGGFNVSNNTQLGLTFTYMATDNIGVEL 74
Query: 115 DDSTFYRLKEKYFIYGDVVLK------------AGYSVDSLLIYGMGGFGGAYVIDSSLE 162
+T +R + GD+ G S + Y G D
Sbjct: 75 LAATPFRHRVGLGPTGDIATVHHLPPTLMAQWYFGDSSSKVRPYIGAGVNYTTFFDEKFN 134
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ + D + +GLDY++N D ++AS Y+ ++ +
Sbjct: 135 DTGKEAGLSDLSLKDSW--GMAGQVGLDYLINRDWLINASVWYMDIDTDVRFKADGQQQS 192
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ S G F
Sbjct: 193 INTRLDPWVFMFSAG--YRF 210
>gi|417406|sp|Q04876|OPAA_NEIGO RecName: Full=Opacity protein opA53; Flags: Precursor
gi|940792|emb|CAA79363.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 239
Score = 38.6 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 15/80 (18%)
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ + G V G+G+D + ++L A YRY
Sbjct: 175 GPTPKPAYHKSRSISSLGFGAVAGVGID--ITPKLTLDAGYRYHNWGRLE---------- 222
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 223 ---NTRFKTHEASLGVRYRF 239
>gi|194098261|ref|YP_002001318.1| OpaD [Neisseria gonorrhoeae NCCP11945]
gi|193933551|gb|ACF29375.1| OpaD [Neisseria gonorrhoeae NCCP11945]
Length = 236
Score = 38.6 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+ V ++L A YRY + + H A
Sbjct: 182 SNSSRRLGFGAMAGVGIDVAPGLTLDAGYRYHNWGRLE-------------NTRFKTHEA 228
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 229 SLGVRYRF 236
>gi|2150104|gb|AAC32725.1| opacity protein [Neisseria meningitidis]
gi|2253243|gb|AAC32684.1| opacity protein Opa102 [Neisseria meningitidis]
Length = 234
Score = 38.6 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 27/119 (22%), Gaps = 30/119 (25%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV---------------- 184
D Y YV + +K
Sbjct: 129 DKFKPYIGARVAYGYVKHQVQSVESKTKTVTSKPNGGPVKEGPTPKPAYHESNSISSLGL 188
Query: 185 -LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ G+ + + ++L YRY + + H SLG+ HF
Sbjct: 189 GVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGVRYHF 234
>gi|332161884|ref|YP_004298461.1| outer membrane protein W [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666114|gb|ADZ42758.1| outer membrane protein W [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 215
Score = 38.2 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D + D V GLDYMV+ + ++
Sbjct: 118 DKLRPYLGIGLNYTTFFDEKFNNTGASAGLTDLSVKDSW--GVAGQAGLDYMVSENWMVN 175
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ +N + + + + + + G F
Sbjct: 176 MSVWWMNIETDVKFKANGQ--EQSIHTRLDPWVFMFGAGYRF 215
>gi|76789924|gb|ABA55070.1| OmpA family protein [Riemerella anatipestifer]
Length = 384
Score = 38.2 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 52/185 (28%), Gaps = 9/185 (4%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+E + R Y + +E G+ V ++
Sbjct: 54 WEVNDGWAAFARLGYRFNPNWRVELEGGYRSGDIGTVRAVSGPNGLCNLTPATGPCHSPE 113
Query: 127 FIYGDVV--LKAGYSVDS----LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
Y S + + G G V ++ ++ + N + +
Sbjct: 114 GDITSTTLMANVLYDFGSPEWTIRPFVGLGVGVNRVNVDTVGRLRQTPAVNFEADDRSYK 173
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYI--PHHIHSVNNSNAKSDVERVDRKGN-AHIASLG 237
+ GL + ++ ++ +YRY+ + + + + +H +LG
Sbjct: 174 FAAQALAGLAWSISDRANVDLTYRYLTGDAEFDTSVSGAGAVPFGSMSGDYDQSHTVTLG 233
Query: 238 INMHF 242
+ F
Sbjct: 234 LRYAF 238
>gi|78187606|ref|YP_375649.1| hypothetical protein Plut_1752 [Chlorobium luteolum DSM 273]
gi|78167508|gb|ABB24606.1| hypothetical protein Plut_1752 [Chlorobium luteolum DSM 273]
Length = 194
Score = 38.2 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 41/151 (27%), Gaps = 14/151 (9%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y LH + + +G + ++ ++ D
Sbjct: 32 YGSLHGGISWMDDMDNAPNLGDDIEMNGAYMVLGAIGCDY--GNYRVEAEAGYQESEVDG 89
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDS--LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
++ Y +D+ Y G G A V +++ +
Sbjct: 90 YNAVASSGDVKIFSLLANGYYDIDAGGFEPYLTAGVGVANVNFNNVAATDP--------- 140
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ + +G GL V + L A YRY
Sbjct: 141 -NETTLAYQIGAGLAIPVADGVMLDARYRYF 170
>gi|297580130|ref|ZP_06942057.1| outer membrane protein W [Vibrio cholerae RC385]
gi|297535776|gb|EFH74610.1| outer membrane protein W [Vibrio cholerae RC385]
Length = 217
Score = 38.2 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S ++ + D + +G DYM+N
Sbjct: 115 FGEANSAFRPYVGAGLNYTTFFDESFNGTGTNAGLSDLKLDDSW--GLAANVGFDYMLND 172
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + A D + D + N + + F
Sbjct: 173 SWFLNASVWYANIETTATYKAGA--DAKSTDVEINPWVFMIAGGYKF 217
>gi|2367649|gb|AAC46155.1| opacity protein [Neisseria meningitidis]
Length = 239
Score = 38.2 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 25/125 (20%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV--------------- 184
D Y +V D +
Sbjct: 128 FDKFKPYIGARVAYGHVKHQVHSVETKTTIYTTAPTGDATVGGTIPERPSSKPAYHESNS 187
Query: 185 -------LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ G+ + + ++L YRY + + H SLG
Sbjct: 188 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 234
Query: 238 INMHF 242
+ F
Sbjct: 235 MRYRF 239
>gi|260733482|gb|ACX48742.1| outer membrane protein W [Vibrio alginolyticus]
Length = 214
Score = 38.2 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S Y G D + D + IG+DYM+N
Sbjct: 112 FGESQSKFRPYVGAGLNYTMFFDEDFNSTGKGADLSDLKLDDS--FGLAANIGVDYMIND 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+A+ Y + + ++ D K N + + F
Sbjct: 170 QWFLNAAAWYANIETEATYKAGGV--KQKTDVKINPWVFMISGGYKF 214
>gi|254230148|ref|ZP_04923543.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262394952|ref|YP_003286806.1| outer membrane protein A [Vibrio sp. Ex25]
gi|151937341|gb|EDN56204.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262338546|gb|ACY52341.1| outer membrane protein A precursor [Vibrio sp. Ex25]
Length = 320
Score = 38.2 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 23/187 (12%), Positives = 57/187 (30%), Gaps = 44/187 (23%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + D + LG +G+ + + F + +
Sbjct: 23 YVGGKMGKSW----MEDACVAGQACDKDDSTLGAFVGYEM---NKYFAVEA---GFDNIG 72
Query: 118 TFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
F + + + K + + + +YG G
Sbjct: 73 DFNQTSFGGHVEAITLAPKFSLPITEDIALYGKVGGAYVMFDG----------------- 115
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
S + GL++ ++ +++ A Y+ +D+ + + A+
Sbjct: 116 --KDDYSYLGAAGLEFNLSQNVTARAEYQ-------------TLTDISNDVTRATGNTAT 160
Query: 236 LGINMHF 242
LG++ F
Sbjct: 161 LGVSFKF 167
>gi|194097681|ref|YP_002000721.1| outer membrane protein [Neisseria gonorrhoeae NCCP11945]
gi|193932971|gb|ACF28795.1| outer membrane protein [Neisseria gonorrhoeae NCCP11945]
Length = 227
Score = 38.2 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 31/128 (24%), Gaps = 36/128 (28%)
Query: 138 YSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH--------------- 179
Y D Y +V S ++ D
Sbjct: 113 YDFDTGSRFKPYIGARVAYGHVRHSIDSTKKTTEVTTILHGPDTTPTVYPGKNTQDDHRE 172
Query: 180 -----GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L A YRY + + H A
Sbjct: 173 GNSIRRVGLGVIAGVGFDITPKLTLDAGYRYHNWGRLE-------------NTRFKTHEA 219
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 220 SLGMRYRF 227
>gi|194333243|ref|YP_002015103.1| hypothetical protein Paes_0399 [Prosthecochloris aestuarii DSM 271]
gi|194311061|gb|ACF45456.1| conserved hypothetical protein [Prosthecochloris aestuarii DSM 271]
Length = 234
Score = 38.2 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 61/203 (30%), Gaps = 23/203 (11%)
Query: 58 YVGLHISRLY-----ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
Y+ +I + + + T +GL + D+ +
Sbjct: 27 YISGNIGISWLNDYESSESRDGSFIPNTGLFEFGSGLTLAAAFGCDYGDYRAEAEIGYQS 86
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKA--------GY---SVD---SLLIYGMGGFGGAYVID 158
D+ + E+ D+ GY ++ L + GF D
Sbjct: 87 GDVDTFAFGTGERDPFAMDMTGDVTILSIMGNGYYDIALGSDVELFLMAGAGFAQVNFDD 146
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV--NNS 216
+ + E N + +G GL V+ I L A YRY +V +
Sbjct: 147 VAAAEEEQMMGPNLALNVTEVAFAYQIGAGLALPVSDGIMLEAKYRYFATTDFTVSDDFD 206
Query: 217 NAKSDVERVDRKGNA--HIASLG 237
+ +E + GN H A LG
Sbjct: 207 LPLNGIEDTEWVGNIESHSAMLG 229
>gi|157960903|ref|YP_001500937.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845903|gb|ABV86402.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 365
Score = 38.2 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 53/178 (29%), Gaps = 10/178 (5%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + P D K+ P + G+ + FG
Sbjct: 28 WYVGGGVG-INNYQPNCDQKTMKSCGEDDPYAWDVFAGYLF---NDYFGAELGYRDLG-R 82
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + K G G ++ + + G + + S+N +
Sbjct: 83 AQWVDYSNKLNDVGAK----GMNLGLVAFWPFAGDWSLSAEAGAFNYIISNNKNYGSEYY 138
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+G + +G G+ Y + ++ + A Y RY +S+ ++
Sbjct: 139 SDNGVAPYVGAGIGYNITDNLKIQAKYRRYENLDEDKWKTLEMESNYWGLELSYRFGS 196
>gi|186477538|ref|YP_001859008.1| OmpW family protein [Burkholderia phymatum STM815]
gi|184193997|gb|ACC71962.1| OmpW family protein [Burkholderia phymatum STM815]
Length = 240
Score = 38.2 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 25/188 (13%), Positives = 46/188 (24%), Gaps = 15/188 (7%)
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQ---LEDFVFGINCHTTAAKDDSTFYRLKEKY 126
P+ T+ + + +G G+ F GI + K
Sbjct: 53 TPVNITLPNTGATAGDGDTIGFTAGYFFTDHIATQFDVGIPPQFDLKGSGAFQQYGKLGS 112
Query: 127 FIYGDVVLKAGYSVD----SLLIYGMGGFGGAYVIDS--SLEKVESDNSKNAKGRFDGHG 180
L Y + Y G + D S +++
Sbjct: 113 AKQWSPTLLLKYYFNQPQAKFRPYLGIGVSRVWFTDEKISNGTFQNNVLHGPTTVTTDSS 172
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI------A 234
V G Y S Y+P + N+ A + + V+ + I
Sbjct: 173 WEPVFNAGFTYAFTDHWFAGFSISYLPLSTTAKLNTTANTPIGPVNVQSETKIRLNPIVT 232
Query: 235 SLGINMHF 242
+ + F
Sbjct: 233 YVNLGYRF 240
>gi|308048728|ref|YP_003912294.1| OmpW family protein [Ferrimonas balearica DSM 9799]
gi|307630918|gb|ADN75220.1| OmpW family protein [Ferrimonas balearica DSM 9799]
Length = 209
Score = 38.2 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 5/102 (4%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+L Y G D + + +G+DY N + ++
Sbjct: 113 GNLRPYIGAGVNMTVFFDEKFTNDLDGALSDLDVD---TSFGLAGQVGIDYKFNDNWLVN 169
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
AS YI N + D ++ S+G F
Sbjct: 170 ASVWYIDIGTDVNFNLGEDRVSIKTDIDPWVYMLSVG--YTF 209
>gi|329122289|ref|ZP_08250877.1| outer membrane protein P.IIC [Haemophilus aegyptius ATCC 11116]
gi|327473850|gb|EGF19267.1| outer membrane protein P.IIC [Haemophilus aegyptius ATCC 11116]
Length = 242
Score = 38.2 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 13/52 (25%)
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + +I+L YRY + + H AS G+ F
Sbjct: 204 YDITPNITLDLGYRYNDWGRLE-------------NVRFKTHEASFGVRYRF 242
>gi|253996085|ref|YP_003048149.1| OmpW family protein [Methylotenera mobilis JLW8]
gi|253982764|gb|ACT47622.1| OmpW family protein [Methylotenera mobilis JLW8]
Length = 230
Score = 38.2 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 2/98 (2%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G +D L + +K + D L G+D+ + ++A +
Sbjct: 135 PYVGAGINYTNFLDKKLNIRQGA-LAGSKIKVDNDSWGYALQAGVDFNLKDGWLINADVK 193
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ +V + N + +GI F
Sbjct: 194 YVTIDT-TVKLKQTSGWTKIDSLDINPWVFGIGIGKKF 230
>gi|163637021|gb|ABY27331.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia cameroni]
Length = 206
Score = 38.2 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ + +G +++D I + + + + G + +
Sbjct: 40 GTDDVDPFKASFIGGGAAFGYKMDDIRVDIEGLYSQLNKNVNNDEVLTPDTVAGSLTAIS 99
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 100 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 151
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 152 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 206
>gi|253699032|ref|YP_003020221.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251773882|gb|ACT16463.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 459
Score = 38.2 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 46/159 (28%), Gaps = 35/159 (22%)
Query: 86 PNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL- 144
G+ G+N FG+ T + Y + + + +
Sbjct: 50 GPAAGLRGGYNFTSH---FGLEAVLTYISTEGKAYSGIGDVDALNYHLDMLYHFMPESML 106
Query: 145 -IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
Y G+GG + ++ +G + + S+ G G+ Y + ++L
Sbjct: 107 VPYLAMGYGG--------------HWRDYEGDGEVNRSAFNYGGGVKYFLTDAMALRGDV 152
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
R+I D H G+ + F
Sbjct: 153 RHI----------------VMRDHDDTFHNLEYGVGVDF 175
>gi|295690436|ref|YP_003594129.1| hypothetical protein Cseg_3070 [Caulobacter segnis ATCC 21756]
gi|295432339|gb|ADG11511.1| hypothetical protein Cseg_3070 [Caulobacter segnis ATCC 21756]
Length = 241
Score = 38.2 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 57/221 (25%), Gaps = 24/221 (10%)
Query: 46 YQDDEYGIWSGNYVGLHIS--RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF- 102
DE ++ G + G+++ + + LA R G+ +G +
Sbjct: 21 AVADESRLYVGAFAGVNLGEKQTFTGANLAGAPRRIDAPQDEGALAGVVVGLVASEGAWG 80
Query: 103 VFGINC-------HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS---VDSLLIYGMGGFG 152
+ L + ++ Y L G G
Sbjct: 81 RLRFEAELASRKNDVEKLTLNGVRRGLIDGESQVTTQMVNITYDTPRWGKLRGMVGAGVG 140
Query: 153 GAYVIDSSLEKVESDNSKNAKGRF---------DGHGSSVVLGIGLDYMVNYDISLSASY 203
A V + G + + IG Y ++ L+A
Sbjct: 141 AASFDYDIQYDVGAIPGAPTGGSIGPIINIPTSTSGRLAYQVMIGGQYELSPSWELTAEL 200
Query: 204 RYIPHHIHSVNNSNAKSDVER--VDRKGNAHIASLGINMHF 242
RY+ H + N + +D K + + G F
Sbjct: 201 RYLWGDDHKIERFNQTTGALDSVLDAKYESSAVTFGARHRF 241
>gi|225872355|ref|YP_002753810.1| hypothetical protein ACP_0690 [Acidobacterium capsulatum ATCC
51196]
gi|225794087|gb|ACO34177.1| hypothetical protein ACP_0690 [Acidobacterium capsulatum ATCC
51196]
Length = 196
Score = 38.2 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 53/172 (30%), Gaps = 22/172 (12%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR 121
+I Y L ++ + +SL + I ++I + + + D+
Sbjct: 46 NIGGEYA---LFNSDYFQGNHSLNKSAFAIYGNYSILNGRWPVAGEINFSRMASDAPGKG 102
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+ + G+ L + G G + + + A G+ G
Sbjct: 103 SEYSLLVGPT----IGHYYGRLKPFAKVGLGIGHF-----------SLQGAPGQQLGTHL 147
Query: 182 SVVLGIGLDYMVNYDISLS-ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
++ G GL+Y + I+L Y Y + + + V H
Sbjct: 148 AIGFGGGLEYHLTNRITLRPLDYTY---ERWNFSPNALSPSVLGFGASYRIH 196
>gi|319428521|gb|ADV56595.1| outer membrane protein, DmsF [Shewanella putrefaciens 200]
Length = 667
Score = 38.2 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 60/193 (31%), Gaps = 24/193 (12%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIE-LGHNIQL-----EDFVFGINCHTTAAKDDSTFY 120
+ T N Y+ L G++ G+N+QL F + + D
Sbjct: 477 WLTLDFDAHYNNDDYDDTLIGLTGVKDYGYNVQLSAQFSNRFNVFASAGQQWIESDMAGS 536
Query: 121 RLKEKYFIYGDVV-----LKAGYSVDSLL---IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ Y +V L G++ D L+ + G + A +L ++ +
Sbjct: 537 QAYSTPDWYTNVDDEFIDLNIGFTYDGLMDDRLSIGGNYQFANSASDTLITAATNQPYSD 596
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY-----IPHHIHSVNNSNAKSDVERVDR 227
+ + Y +N + L SY Y + S N ++
Sbjct: 597 YYSYSHNLELY-----GRYALNDRMGLKLSYNYERYYDTDYAEVSTNAVAGLVSFGELNH 651
Query: 228 KGNAHIASLGINM 240
NAH+ L +
Sbjct: 652 NYNAHLLMLTFSY 664
>gi|154148463|ref|YP_001406711.1| autotransporter domain-containing protein [Campylobacter hominis ATCC
BAA-381]
gi|153804472|gb|ABS51479.1| putative secreted protein, autotransporter domain [Campylobacter
hominis ATCC BAA-381]
Length = 1677
Score = 38.2 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 38/141 (26%), Gaps = 28/141 (19%)
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAG----YSV-DSLLIYGMGGFGGA----YVIDSSL 161
++ F L + + L+AG Y + D ++G G
Sbjct: 1556 AYTENGDEFLALSVDKQDFDSLELQAGLESKYLINDKFSLFGKAGLIVETMDDETKIDFS 1615
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
K V+G G DYM SL ++Y
Sbjct: 1616 LISNPSKKAQIKSDAKNDLLG-VVGGGFDYMPTD--SLKLEFKY---------------- 1656
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ N I LG+N F
Sbjct: 1657 NGKFGDDYNNQIIGLGLNYRF 1677
>gi|259908319|ref|YP_002648675.1| hypothetical protein EpC_16670 [Erwinia pyrifoliae Ep1/96]
gi|224963941|emb|CAX55446.1| Putative exported protein [Erwinia pyrifoliae Ep1/96]
gi|283478257|emb|CAY74173.1| Outer membrane protein W precursor [Erwinia pyrifoliae DSM 12163]
Length = 210
Score = 38.2 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 4/104 (3%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
Y G + + D + + + +GLDY + +
Sbjct: 111 DASKWQPYAGIGVNYTLFYHADFNQTGRDAGLSDLSVKNSW--GMAGQVGLDYQLTPEWM 168
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y+ N+ + +D + + +G F
Sbjct: 169 LNASVWYMDIDTKVSFNAGE--ARQSIDTHIDPWVFFIGAGYRF 210
>gi|91225860|ref|ZP_01260829.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269965437|ref|ZP_06179556.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
gi|91189510|gb|EAS75786.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269829916|gb|EEZ84146.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
Length = 320
Score = 38.2 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 23/187 (12%), Positives = 57/187 (30%), Gaps = 44/187 (23%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + + D + LG +G+ + + F + +
Sbjct: 23 YVGGKMGKSW----MEDACVAGQACDKDDSTLGAFVGYEM---NKYFAVEA---GFDNIG 72
Query: 118 TFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
F + + + K + + + +YG G
Sbjct: 73 DFNQTSFGGHVEAITLAPKFSLPITEDIALYGKVGGAYVMFDG----------------- 115
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
S + GL++ ++ +++ A Y+ +D+ + + A+
Sbjct: 116 --KDDYSYLGAAGLEFNLSQNVTARAEYQ-------------TLTDISNDVTRATGNTAT 160
Query: 236 LGINMHF 242
LG++ F
Sbjct: 161 LGVSFKF 167
>gi|52840969|ref|YP_094768.1| hypothetical protein lpg0732 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54296759|ref|YP_123128.1| hypothetical protein lpp0798 [Legionella pneumophila str. Paris]
gi|52628080|gb|AAU26821.1| hypothetical protein lpg0732 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750544|emb|CAH11946.1| hypothetical protein lpp0798 [Legionella pneumophila str. Paris]
Length = 212
Score = 38.2 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 54/199 (27%), Gaps = 28/199 (14%)
Query: 56 GNYVGLHISRLY---ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
G Y Y + A + R G +G+ Q + +
Sbjct: 24 GWYASAFGGYTYIPPNIYNFAYGVFRDEVGYNNGYNAGGRVGY--QSNPIRYEVEYTYLR 81
Query: 113 AKDDSTFYRLKEKYFIYG-----DVVLKAGYSVDSLLI----YGMGGFGGAYVIDSSLEK 163
+ + + G ++ Y +L + G G A +
Sbjct: 82 GEARKFNLNFITQLGVTGFTSANTIMANIYYDCPDMLPAIAPFIGLGIGYASLRTEL--- 138
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + + +G+ Y + + + + +YRYI S
Sbjct: 139 DSIGPFRPSYFTTSDSAFAYQGTVGITYNFSENYAANLAYRYIATDNSS----------- 187
Query: 224 RVDRKGNAHIASLGINMHF 242
+ AH+AS+G F
Sbjct: 188 NFGKTYQAHLASVGAIYRF 206
>gi|330894847|gb|AEC47888.1| Omp1 [Moritella viscosa]
Length = 196
Score = 38.2 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 48/158 (30%), Gaps = 27/158 (17%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG Y+G T D N L G+ Q V I T
Sbjct: 26 SGFYLG---GGAGSTTVNLDEKNYALDEDTDGKTLKFITGY--QFNRIV-AIEAQYTKYG 79
Query: 115 DDSTFYRLKEKYFIY------GDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
+ + + +Y V GY+ + L +G+ G + S
Sbjct: 80 EITPDKNITRDGKLYTWDATTFSVSANLGYTFQNGLRPFGIIGLSSLDLGQS-------- 131
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASY 203
+K D + ++V LG GL+Y +S Y
Sbjct: 132 ----SKALKDDNATAVHLGAGLEYTPAALSGVSFRVGY 165
>gi|325128693|gb|EGC51559.1| opacity protein [Neisseria meningitidis N1568]
Length = 249
Score = 38.2 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 29/122 (23%), Gaps = 33/122 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V S ++ + + G
Sbjct: 141 DKFKPYIGARVAYGHVRHSIDSTKKTTEVLTSTHAPSTAPTIYNQGSTQNAYHESHSIRR 200
Query: 187 ------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
G+ + + ++L YRY + + H SLG+
Sbjct: 201 LGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMRY 247
Query: 241 HF 242
HF
Sbjct: 248 HF 249
>gi|315497902|ref|YP_004086706.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48]
gi|315415914|gb|ADU12555.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48]
Length = 407
Score = 38.2 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSK---NAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+ G G V + + + N + ++ G + ++ ++L
Sbjct: 157 PFVGLGIGLDRVKADFTGQYSVNPTGVGQNLTISGEDTVAAYQALAGFAWALSDRLNLDL 216
Query: 202 SYRYIPHHIHSVNN--SNAKSDVERVDRKGNAHIASLGINMHF 242
+YRY+ ++N + A + K + ++G+ F
Sbjct: 217 TYRYLTTEEVNLNATSTTALLNPGSFSGKFDDQTLTVGLRWSF 259
>gi|238788426|ref|ZP_04632219.1| Outer membrane protein W [Yersinia frederiksenii ATCC 33641]
gi|238723339|gb|EEQ14986.1| Outer membrane protein W [Yersinia frederiksenii ATCC 33641]
Length = 215
Score = 38.2 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D S D V GLDYMV+ + L+
Sbjct: 118 DKLRPYLGIGLNYTTFFDEKFNNTGSSAGLTDLSVKDSW--GVAGQAGLDYMVSENWMLN 175
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ + + + + + + + G F
Sbjct: 176 MSVWWMNIETDVKFKAGGE--EQTIHTRLDPWVFMFGAGYRF 215
>gi|163637023|gb|ABY27332.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia cameroni]
Length = 201
Score = 38.2 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
++ Y+ L P+ + +++D + + + + I + +
Sbjct: 35 DKSDYSPLKPSFIAGGGAFGYKMDDIRVDVEGVYSYLNKNDVTDAEFKPDTIADSLTAIS 94
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 95 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 146
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 147 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 201
>gi|325128517|gb|EGC51393.1| opacity protein [Neisseria meningitidis N1568]
Length = 228
Score = 38.2 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 27/122 (22%), Gaps = 33/122 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDSS--------------------LEKVESDNSKNAKGRFDGHG 180
D Y +V S +
Sbjct: 120 DKFKPYIGARVAYGHVRHSIDSTKKTTEVLTSSHAPGTAPTIYNQGSTQNAYHESHSIRR 179
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 180 LGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMRY 226
Query: 241 HF 242
HF
Sbjct: 227 HF 228
>gi|148654164|ref|YP_001281257.1| OmpA domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148573248|gb|ABQ95307.1| OmpA domain protein transmembrane region-containing protein
[Psychrobacter sp. PRwf-1]
Length = 193
Score = 38.2 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 55/193 (28%), Gaps = 29/193 (15%)
Query: 60 GLHISRLYETHPLADTINRK-------TYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
G + Y A GI G FG+
Sbjct: 20 GAQAAVNYGNGMTAQPYIGAKIGQYDLDKADNEAMSYGIYGGAKFTPN---FGVEAEYM- 75
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAG---YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+D F R K DV G Y+ +Y G G A ++S +
Sbjct: 76 TTNDEDFTRGANKSEYSADVYGLYGTYDYTFPGSQMYAKGRLGVAKNKVD----IDSKSL 131
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ + + G+GL Y + + ++ +Y + P + + N
Sbjct: 132 AYNRYDGKKSDTGIAGGLGLGYNLAPNAAVEVAYDWYPKVDNVADKGN-----------L 180
Query: 230 NAHIASLGINMHF 242
+A +LG N F
Sbjct: 181 DASGVTLGANFKF 193
>gi|229590671|ref|YP_002872790.1| putative TonB-dependent outer membrane receptor [Pseudomonas
fluorescens SBW25]
gi|229362537|emb|CAY49444.1| putative TonB-dependent outer membrane receptor [Pseudomonas
fluorescens SBW25]
Length = 686
Score = 38.2 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 2/121 (1%)
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
L+ + L+ GY D++ + GG +S +++ +N + + D +
Sbjct: 329 LRNQAGNMFSQELRLGYESDTIRSF--GGVYFGRTTNSFHDRLLFNNVQRGAAKGDVAIN 386
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ L +D+ + +L RY + + S +V + +A + LG++
Sbjct: 387 NAALFGEVDWDFAPNWTLITGLRYDYETNDTDIEQDDFSSPGKVKKSFSALLPKLGVDYQ 446
Query: 242 F 242
F
Sbjct: 447 F 447
>gi|225075957|ref|ZP_03719156.1| hypothetical protein NEIFLAOT_00982 [Neisseria flavescens
NRL30031/H210]
gi|224952672|gb|EEG33881.1| hypothetical protein NEIFLAOT_00982 [Neisseria flavescens
NRL30031/H210]
Length = 211
Score = 38.2 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 18/149 (12%), Positives = 37/149 (24%), Gaps = 34/149 (22%)
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVD---------SLLIYGMGGFGGAYVIDSSLEKVE 165
+ + +++ G ++GY + Y G + S +
Sbjct: 76 NGAVTAKIEADNTDKGTFKAESGYGISAIYDFDTGTRFKPYAGVRVGLGKIRHSISLEGT 135
Query: 166 SDNSKNA------------KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ N G+ + +++L YRY
Sbjct: 136 KTTTINNIVRGPEKAYEPIHESHSIRRVGFGAVAGVGIDITPNLTLDTGYRYHYWGHLE- 194
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 195 ------------NTRFKTHEASLGVRYRF 211
>gi|109896362|ref|YP_659617.1| OmpW [Pseudoalteromonas atlantica T6c]
gi|109698643|gb|ABG38563.1| OmpW [Pseudoalteromonas atlantica T6c]
Length = 227
Score = 38.2 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 29/98 (29%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D S N + + IG+DY ++ ++AS R
Sbjct: 134 PYVGIGLNYTVFFDEQFVGNREAQSFNNLSLDES--FGIAAQIGMDYKLDEHWLINASVR 191
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YI + + VD + LG F
Sbjct: 192 YIDIDTEAKFDVLDLPAQVSVDIDPWVYSLMLG--YKF 227
>gi|312889906|ref|ZP_07749450.1| hypothetical protein MucpaDRAFT_0348 [Mucilaginibacter paludis DSM
18603]
gi|311297438|gb|EFQ74563.1| hypothetical protein MucpaDRAFT_0348 [Mucilaginibacter paludis DSM
18603]
Length = 249
Score = 38.2 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 77/248 (31%), Gaps = 34/248 (13%)
Query: 6 YGALFF-VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
LF + L + + Y PR + ++ Q+D I G VG
Sbjct: 24 KKILFTAICLLLVAGSVSAQQHRRYYPR---NRPQPNHRRPVQNDFNTIKFGI-VGG--- 76
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE---DFVFGINCHTTAAKDDSTF-- 119
+++ IN N G+ G ++++ F F + +
Sbjct: 77 -----VNVSNIINTNDANFSTGTRAGLNAGVSLEVPISYPFAFQPELLYSGKGYSAITPV 131
Query: 120 YRLKEKYFIYG-----DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ ++ V + G++ + ++ D A
Sbjct: 132 GQFSQRTNWIDLPLLLKVKVVPGFNF-VVGPQVSFLLSTQNTFNNGYSTTTQDVYNKATD 190
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
++ VLG+G + V+ ++ L A Y YI ++N + + N +
Sbjct: 191 GYNKTLIGGVLGVGFE--VSPNVELRARY-YIDLQSTTINGVSDIP-------QYNNQVW 240
Query: 235 SLGINMHF 242
G+ + F
Sbjct: 241 QFGVAVKF 248
>gi|2642247|gb|AAC45978.1| opacity protein [Neisseria meningitidis]
Length = 232
Score = 38.2 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 29/118 (24%)
Query: 141 DSLLIYGMGGFGGAYVID--------------SSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D Y +V ++ V + SSV LG
Sbjct: 128 DKFKPYIGVRVAYGHVKHQVHSVESKTTTVTTNNGGPVPQGPTPKPAYHESHSISSVGLG 187
Query: 187 --IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ + + ++L YRY + + H SLG+ HF
Sbjct: 188 VIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMRYHF 232
>gi|2642243|gb|AAC45976.1| opacity protein [Neisseria meningitidis]
gi|2642245|gb|AAC45977.1| opacity protein [Neisseria meningitidis]
Length = 232
Score = 38.2 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 29/118 (24%)
Query: 141 DSLLIYGMGGFGGAYVID--------------SSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D Y +V ++ V + SSV LG
Sbjct: 128 DKFKPYIGVRVAYGHVKHQVHSVESKTTTVTTNNGGPVPQGPTPKPAYHESHSISSVGLG 187
Query: 187 --IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ + + ++L YRY + + H SLG+ HF
Sbjct: 188 VIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMRYHF 232
>gi|310767758|gb|ADP12708.1| hypothetical protein EJP617_30270 [Erwinia sp. Ejp617]
Length = 210
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 4/104 (3%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
Y G + + D + + + +GLDY + +
Sbjct: 111 DASKWQPYAGIGVNYTLFYHADFNQTGRDAGLSDLSVKNSW--GMAGQVGLDYQLTPEWM 168
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y+ N+ + +D + + +G F
Sbjct: 169 LNASVWYMDIDTKVSFNAGE--ARQSIDTHIDPWVFFIGAGYRF 210
>gi|307295040|ref|ZP_07574882.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1]
gi|306879514|gb|EFN10732.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1]
Length = 170
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 19/140 (13%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDSTFYRLKEK 125
+ G+ G+++ + + FG + +
Sbjct: 26 FTGPRAGVIGGYDKLGGNDGFTYGVSTGYDLAVTPNITFGPEVSFSDTTVGGGGAEISRD 85
Query: 126 YFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
++ GY V+ +L +G G+ + S+ S V
Sbjct: 86 L----AASVRLGYVVNPRVLAFGKVGYANTRIEASNSNTGASFE-------------GVR 128
Query: 185 LGIGLDYMVNYDISLSASYR 204
G G+++ V +SA Y+
Sbjct: 129 YGGGIEFAVTGSTYISAEYQ 148
>gi|311103427|ref|YP_003976280.1| outer membrane protein W [Achromobacter xylosoxidans A8]
gi|310758116|gb|ADP13565.1| outer membrane protein W [Achromobacter xylosoxidans A8]
Length = 212
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 5/92 (5%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G + + +++ + G V +G D+ +N ++A RYI
Sbjct: 126 YIGVGINYTHFFDTKAEGALKGSNLKLGDSWGVAAQLGADFKINERWFMNADIRYIDIRS 185
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + +A++G+ F
Sbjct: 186 KVKLDGQHIGTA-----RIDPWVATIGVGYRF 212
>gi|260554160|ref|ZP_05826419.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260404702|gb|EEW98213.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 321
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 2/94 (2%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G ++ + + K + + +G G Y + D L A Y ++
Sbjct: 146 VGRLNHKFANGSMLSGRSFVAEKRTNNDSEWAWGVGFGGKYQMTPDTLLKADYYHVKGDG 205
Query: 211 HSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ SN+ ++ + SLG+ F
Sbjct: 206 RFLLWSNSGYAIDEQNNMHSNEFDTVSLGVTHQF 239
>gi|197116786|ref|YP_002137213.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
gi|197086146|gb|ACH37417.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
Length = 459
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 45/157 (28%), Gaps = 31/157 (19%)
Query: 86 PNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLI 145
+G+ G+N FG+ T + Y +D L
Sbjct: 50 GPAVGLRGGYNFTSH---FGMEAVLTYISTEGKDGSGIGDVDA-------LNYHLDMLYH 99
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ + L + ++ +G + + S+ G G+ Y + ++L R+
Sbjct: 100 FMP-----ENTLVPYLAMGYGGHWRDYEGDGEVNRSAFNYGGGVKYFLTDAMALRGDVRH 154
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I DR H G+ + F
Sbjct: 155 IIMK----------------DRDETFHDLEYGLGVDF 175
>gi|13591543|emb|CAC36360.1| opacity protein [Neisseria meningitidis]
Length = 244
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 31/123 (25%), Gaps = 33/123 (26%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--------------------H 179
D Y +V S ++ N G +
Sbjct: 135 FDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIR 194
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 195 RLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 241
Query: 240 MHF 242
HF
Sbjct: 242 YHF 244
>gi|2642261|gb|AAC45985.1| opacity protein [Neisseria meningitidis]
Length = 240
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 31/123 (25%), Gaps = 33/123 (26%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--------------------H 179
D Y +V S ++ N G +
Sbjct: 131 FDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIR 190
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 191 RLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 237
Query: 240 MHF 242
HF
Sbjct: 238 YHF 240
>gi|293604160|ref|ZP_06686568.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292817385|gb|EFF76458.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 919
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 57/177 (32%), Gaps = 17/177 (9%)
Query: 29 YLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG 88
+ P L + + E +G ++ +++ T R
Sbjct: 711 FSPAPAALRCALNQANQSPHYETTADNGAWL-AYVTYGLYEG----TTLRIDRPDWFTME 765
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG--YSVDS---- 142
++ G++ Q F + + T D RLK + +G L+ G Y VD+
Sbjct: 766 GYVQAGYSWQDMPAKFWLRDNATGEDGDKVSGRLK-RDQAFGAGELRVGRSYRVDALSDR 824
Query: 143 --LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
Y + G + + + + G+GSS LG G + V Y
Sbjct: 825 LVFFPYAVVGADWLWNKNRANANFGDQSYSV---DQLGNGSSWSLGAGPGFNVRYWF 878
>gi|50084388|ref|YP_045898.1| putative outer membrane W signal peptide protein [Acinetobacter sp.
ADP1]
gi|49530364|emb|CAG68076.1| putative outer membrane W signal peptide protein [Acinetobacter sp.
ADP1]
Length = 254
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 8/110 (7%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD----GHGSSVVLGIGLDYMVNYD 196
+ Y GF A D L + G + V IG DY + +
Sbjct: 145 NKFRPYVGAGFMYASFRDFKLNPEVNAKIAPLGGTISNVDIDDAVAPVAFIGADYNITPN 204
Query: 197 ISLSASYRYIPHHIHS----VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+AS Y+ H+ VN +N + N + LG+ F
Sbjct: 205 WFATASVSYVHLSTHANLNVVNPANVTFVQGSSKIEINPIVTYLGVGYRF 254
>gi|332185341|ref|ZP_08387089.1| surface antigen family protein [Sphingomonas sp. S17]
gi|332014319|gb|EGI56376.1| surface antigen family protein [Sphingomonas sp. S17]
Length = 295
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 54/206 (26%), Gaps = 26/206 (12%)
Query: 57 NYVGLHISRLYETH----PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
YVG+ + + + + +G++ F
Sbjct: 26 WYVGIEGGGMIVEDIDYDVTGTRTGVASVDHDYGYDVDAVMGYD--FGGFRLETEVGYRR 83
Query: 113 AKDDS------------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG-GFGGAYVIDS 159
A D Y G + ++ LL +G G G
Sbjct: 84 ATVDGFSSTTLTNTGIGAGTVPAGNYDYAGGSTSALSFMLNGLLDFGADDGIQGFVGGGV 143
Query: 160 SLEKVESDNSKNAKGRF---DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ +V+++ + N + F + G+ + I + YR+ +
Sbjct: 144 GVARVKANYALNNRADFLNDSDTVFAWQALAGIRAPLTDHIDATLKYRFFNAENVKL--- 200
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
D + +H G+ +F
Sbjct: 201 -VDVANNTFDGRFRSHSILGGVAYNF 225
>gi|270157304|ref|ZP_06185961.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289164311|ref|YP_003454449.1| hypothetical protein LLO_0966 [Legionella longbeachae NSW150]
gi|269989329|gb|EEZ95583.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288857484|emb|CBJ11316.1| hypothetical protein LLO_0966 [Legionella longbeachae NSW150]
Length = 293
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 27/95 (28%), Gaps = 3/95 (3%)
Query: 142 SLLIYGMGGFGGAYVI---DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
Y G G A+ + + N S LG+G+D +N +
Sbjct: 183 QFFPYFSVGLGAAFNNANGFRTSIEELGVNVTPIFRSHSQSVFSYTLGVGVDTPINQQMR 242
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
L YR+ S+ N + R
Sbjct: 243 LGLGYRFSDFGAASLANGEVVINQYRAPVDFALST 277
>gi|317164600|gb|ADV08141.1| outer membrane protein [Neisseria gonorrhoeae TCDC-NG08107]
Length = 227
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 32/125 (25%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG------------- 186
D Y +V + + +K + + G V+
Sbjct: 116 FDKFKPYIGARVAYGHVRHQVNSVDKETITLISKPKGNSPGGGRVVSSLPSKPPYHESNS 175
Query: 187 ---------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G+ + + ++L YRY + + H SLG
Sbjct: 176 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLK-------------NTRFKTHEVSLG 222
Query: 238 INMHF 242
+ HF
Sbjct: 223 MRYHF 227
>gi|320106372|ref|YP_004181962.1| hypothetical protein AciPR4_1140 [Terriglobus saanensis SP1PR4]
gi|319924893|gb|ADV81968.1| hypothetical protein AciPR4_1140 [Terriglobus saanensis SP1PR4]
Length = 203
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 20/183 (10%), Positives = 47/183 (25%), Gaps = 19/183 (10%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
A +N + + G + L + + + A+ F
Sbjct: 33 SAIGIFAPQVNGNSAQLNTNSTTGFLASYRYMLTP-RSALELNYSFAQYTDIFRTSFYPN 91
Query: 127 FIYGDVVLK-------AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ + + + + G GG + D
Sbjct: 92 GLRIHARQQELTGAYVYNMNFRRINPFLEAGVGGF------ILTPIRDFQTQTLDTKQNT 145
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ G G+ Y ++ + YR + N K++ + + ++G+
Sbjct: 146 NIGALFGAGVAYELSPSYDIRVQYRGFLLKSPNFGIDNFKTNRYEI-----ISMPTVGVA 200
Query: 240 MHF 242
HF
Sbjct: 201 YHF 203
>gi|238754962|ref|ZP_04616311.1| Outer membrane protein W [Yersinia ruckeri ATCC 29473]
gi|238706821|gb|EEP99189.1| Outer membrane protein W [Yersinia ruckeri ATCC 29473]
Length = 215
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D D V G+DYMV+ + ++
Sbjct: 118 DKLRPYLGLGLNYTTFFDEKFNNTGGRAQLTDLSVKDSW--GVAGQAGVDYMVSENWMVN 175
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S +I + + + + + + + G F
Sbjct: 176 MSVWWINIETDVKFKAAGE--EKSIKTRLDPWVFMFGAGYRF 215
>gi|123442475|ref|YP_001006454.1| outer membrane protein W [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089436|emb|CAL12284.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318605601|emb|CBY27099.1| outer membrane protein W precursor [Yersinia enterocolitica subsp.
palearctica Y11]
gi|330859708|emb|CBX70043.1| outer membrane protein W [Yersinia enterocolitica W22703]
Length = 211
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D + D V GLDYMV+ + ++
Sbjct: 114 DKLRPYLGIGLNYTTFFDEKFNNTGASAGLTDLSVKDSW--GVAGQAGLDYMVSENWMVN 171
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ +N + + + + + + G F
Sbjct: 172 MSVWWMNIETDVKFKANGQ--EQSIHTRLDPWVFMFGAGYRF 211
>gi|330503560|ref|YP_004380429.1| aromatic hydrocarbon degradation membrane protein [Pseudomonas
mendocina NK-01]
gi|328917846|gb|AEB58677.1| aromatic hydrocarbon degradation membrane protein [Pseudomonas
mendocina NK-01]
Length = 529
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 12/140 (8%)
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLK-AGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESD 167
T ST +++ ++ L+ GYS ++ I + + +D
Sbjct: 343 LTYPDAFSTGIKVRPFDKWQFNLDLRWVGYSDWNNFEIEFDRELDLLRIAKTFGGGNATD 402
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY----IPHHIHSVNNSNAKSDVE 223
S + G+G+ Y VN ++L A Y Y IP + V +D+
Sbjct: 403 RSIILDRGYRDT---WSWGVGVQYDVNDRLALRAGYEYRPSAIPKNKADVLAPVGDADLY 459
Query: 224 RVDRKG---NAHIASLGINM 240
+ +G N
Sbjct: 460 GLGLGYRWDKDTTIDVGFNY 479
>gi|257453951|ref|ZP_05619227.1| OmpA domain protein transmembrane region-containing protein
[Enhydrobacter aerosaccus SK60]
gi|257448616|gb|EEV23583.1| OmpA domain protein transmembrane region-containing protein
[Enhydrobacter aerosaccus SK60]
Length = 189
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 62/207 (29%), Gaps = 39/207 (18%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ 98
N YQ + G YVG+ + D N+ Y G+ G+N
Sbjct: 19 AGANAALYQTNTVGYTGQPYVGVKAGQFNTDVDYYDADNQTAY--------GVYAGYNFT 70
Query: 99 LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG---YSVDSLLIYGMGGFGGAY 155
FG + + YR + I + G Y + +Y G G A
Sbjct: 71 PN---FGAEVEYVDSSKEDLKYRGTKVGEISTNTAGLYGTYKYQFPASNVYAKGKLGIAQ 127
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
G S + G+GL Y ++ + S+ A Y
Sbjct: 128 TQVD-------------FGDDKYDESGLAGGVGLGYNLSPNASVEAEY------------ 162
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
+ S + ++ + ++G + F
Sbjct: 163 TRLPSVDVTNNVSVDSDLVTVGAHYKF 189
>gi|88860080|ref|ZP_01134719.1| hypothetical protein PTD2_18750 [Pseudoalteromonas tunicata D2]
gi|88818074|gb|EAR27890.1| hypothetical protein PTD2_18750 [Pseudoalteromonas tunicata D2]
Length = 233
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESD--NSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
D+ +Y +GG + + + + LG GL Y + +
Sbjct: 150 DTWSVYVLGGLAVHKIDAKVYKSKGDTVPYIQTNVAQSTEVTLGGKLGFGLQYDFSPNWG 209
Query: 199 LSASYRYIPH 208
+ Y Y +
Sbjct: 210 VKLGYSYFSY 219
>gi|127512023|ref|YP_001093220.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126637318|gb|ABO22961.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 367
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 54/178 (30%), Gaps = 10/178 (5%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+ YVG + P D K P + G+ + FG+
Sbjct: 26 TPWYVGGGLGVN-NYEPNCDQKTMKQCGEDDPYAWDVFGGYLF---NDYFGVELGYR--- 78
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D + DV + G ++ + + ++ + S+N +
Sbjct: 79 -DLGRAEWVDYANKLNDVGAR-GMTLGLVGFWPFADRWSLSAEAGAMNYLLSNNKQWGSE 136
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G + G G+ Y ++ L A Y RY N + +S+ ++
Sbjct: 137 YYSDSGVAPYFGAGIGYNFTDNLKLQAKYRRYENLDEDKWNTLDMESNYWGLELSYRF 194
>gi|325208743|gb|ADZ04195.1| opacity protein [Neisseria meningitidis NZ-05/33]
Length = 232
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 29/125 (23%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------------------- 180
D Y +V + + +K
Sbjct: 121 FDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSVTKPGEIVETPTSKPAYHESHS 180
Query: 181 ---SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ + G+ + + ++L YRY + + H SLG
Sbjct: 181 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 227
Query: 238 INMHF 242
+ HF
Sbjct: 228 MRYHF 232
>gi|261253627|ref|ZP_05946200.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
gi|260937018|gb|EEX93007.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
Length = 320
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 50/187 (26%), Gaps = 40/187 (21%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G + + S+ G+ G+ L+ I +
Sbjct: 22 FYLGGKAGKSWLDDACTSATTNCDDESI---TAGLFAGYEF-LDY--LSIEGGYDYLG-E 74
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T + + K + + +YG G
Sbjct: 75 FTADGISGDKAHAWTLAPKLTIPFNDTVSLYGKFGGAYVEYG------------------ 116
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
D +S + +GL+ + ++ + Y+ +DV K + A+
Sbjct: 117 -DKDDNSYLGAVGLELNSDSNVRVRLEYQ-------------RLTDVNNDLVKAAVNSAT 162
Query: 236 LGINMHF 242
LG HF
Sbjct: 163 LGFVYHF 169
>gi|260222563|emb|CBA32249.1| hypothetical protein Csp_D31190 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 183
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 32/187 (17%)
Query: 61 LHISRLYETHPL---ADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD 116
L+ T L +++ LG+ +++ L V G+ D
Sbjct: 24 LNFGGFSLTGALNVNSNSGEAGNKVDATRGNLGVTAQYDVPLGSALVMGLGASLGLNSFD 83
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
K V + G +++ ++YG A V + S
Sbjct: 84 IASN---AKLKSTASVFVAPGIAINKQAMVYGKVAVVSAQVDIDGVGAPISGTGT----- 135
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
G+GL Y+VN ++ + Y ++ ++ + K I +
Sbjct: 136 ----------GLGLRYLVNKNLFVQGEYLLHKYNDQTI---------GSIAFKNQTSIFT 176
Query: 236 LGINMHF 242
+G+ F
Sbjct: 177 MGVGYKF 183
>gi|171056807|ref|YP_001789156.1| OmpW family protein [Leptothrix cholodnii SP-6]
gi|170774252|gb|ACB32391.1| OmpW family protein [Leptothrix cholodnii SP-6]
Length = 198
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 29/103 (28%), Gaps = 13/103 (12%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+ ++ Y G S N N + + + G+DY ++ SL
Sbjct: 109 LGAIKPYVGAGVNYTRF--------SSVNLLNGALSVEKNSFGLAFQAGVDYAIDKQWSL 160
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + K + + +G+ F
Sbjct: 161 NL-----DVKKVQIRTDLSLGATNLGTLKVDPTLIGIGLGYKF 198
>gi|194337493|ref|YP_002019287.1| outer surface protein, putative [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309970|gb|ACF44670.1| outer surface protein, putative [Pelodictyon phaeoclathratiforme
BU-1]
Length = 186
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 50/182 (27%), Gaps = 24/182 (13%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR 121
++S + L+D+ G L++ + I +
Sbjct: 28 YLSGRFAVSMLSDSEITPLSYDTGYMLAGAVG-----LDNGPYRIEAELGRQNSGVSKSL 82
Query: 122 LK-EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
G++ V L + G G A V + G D
Sbjct: 83 RSLVMTTYMGNLSFDLDLPVAPLKPFISAGVGLANVKEDDGI----------GGNVDDMV 132
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ +G G + V ++L YRY+ +N E + H LG+
Sbjct: 133 FAWQIGAGAGFDVAPLVTLEVQYRYL--------VANDPELAEHKKYTIDNHNVLLGLRA 184
Query: 241 HF 242
F
Sbjct: 185 GF 186
>gi|161870480|ref|YP_001599652.1| opacity outermembrane protein [Neisseria meningitidis 053442]
gi|161596033|gb|ABX73693.1| opacity outermembrane protein [Neisseria meningitidis 053442]
Length = 260
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 31/119 (26%), Gaps = 30/119 (25%)
Query: 141 DSLLIYGMGGFGGAYVIDS---------------SLEKVESDNSKNAKGRFDGHGSSVVL 185
D Y YV + V+ + SSV L
Sbjct: 155 DKFKPYIGARVAYGYVKHQVHSVESKTKTVTPKPNGGPVKEGPTPKPAYHESHSISSVGL 214
Query: 186 G--IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G G+ + + ++L YRY + + H SLG+ F
Sbjct: 215 GVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMRYRF 260
>gi|311279835|ref|YP_003942066.1| OmpW family protein [Enterobacter cloacae SCF1]
gi|308749030|gb|ADO48782.1| OmpW family protein [Enterobacter cloacae SCF1]
Length = 211
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 30/98 (30%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G ++S D + D +G+DYM+N D ++AS
Sbjct: 118 PYVGVGINYTTFFNNSFNDTGKDAGLSDLSLKDSW--GAAGQVGVDYMLNQDWLINASVW 175
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ +N + + S G F
Sbjct: 176 YMDIDTDVKFKANGVNQSVSTRLDPWVFMFSAG--YRF 211
>gi|330894831|gb|AEC47880.1| Omp1 [Moritella viscosa]
gi|330894845|gb|AEC47887.1| Omp1 [Moritella viscosa]
Length = 196
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 54/197 (27%), Gaps = 35/197 (17%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG Y+G T D N L G+ Q V I T
Sbjct: 26 SGFYLG---GGAGSTTVNLDEKNYAFDEDTDGKTLKFITGY--QFNRIV-AIEAQYTKYG 79
Query: 115 DDSTFYRLKEKYFIY------GDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
+ + + +Y V GY+ + L +G+ G + S
Sbjct: 80 EITPDKNITRDGKLYTWDATTFSVSANLGYTFQNGLRPFGIIGLSSLDLGQS-------- 131
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+K D + ++V LG GL+Y +S Y I +D
Sbjct: 132 ----SKALKDDNATAVHLGAGLEYTPAALSGVSFRVGYEAELFAIE--------ADASSE 179
Query: 226 DRKGNAHIASLGINMHF 242
D + F
Sbjct: 180 DIDVLVGSLYVAATYKF 196
>gi|329295874|ref|ZP_08253210.1| outer membrane protein X [Plautia stali symbiont]
Length = 149
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 40/136 (29%), Gaps = 9/136 (6%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
++ + Y + G L + + G N T + D T + K
Sbjct: 2 AQSTVSAGYAQSDYQGVANKANGFNLKYRYEDGSNPLGWNGSFTYTEKDRTEDGVYNKGQ 61
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
YG A D IYG+ G G N + + D G
Sbjct: 62 YYGITGGPAYRLNDWTSIYGVMGIGYGKYQ---------QNQTAGQSKTDSRDVGFSYGA 112
Query: 188 GLDYMVNYDISLSASY 203
G+ + +++L Y
Sbjct: 113 GMQFNPIQNVALDVGY 128
>gi|319898065|ref|YP_004136262.1| opacity-related protein precursor [Haemophilus influenzae F3031]
gi|317433571|emb|CBY81955.1| Opacity-related protein precursor [Haemophilus influenzae F3031]
Length = 253
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 13/52 (25%)
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + +I+L YRY + + H AS G+ F
Sbjct: 215 YDITPNITLDLGYRYNDWGRLE-------------NVRFKTHEASFGVRYRF 253
>gi|269964816|ref|ZP_06179053.1| outer membrane protein OmpW [Vibrio alginolyticus 40B]
gi|269830476|gb|EEZ84698.1| outer membrane protein OmpW [Vibrio alginolyticus 40B]
Length = 204
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G Y G D DN + D + IG+DYM+N
Sbjct: 102 FGEPQSKFRPYVGAGLNYTMFFDEGFNSTGKDNGLSDLKLDDS--FGLAANIGVDYMIND 159
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+A+ Y + + ++ D K N + + F
Sbjct: 160 QWFLNAAAWYANIETEATYKAGG--AKQKTDVKINPWVFMISGGYKF 204
>gi|229495273|ref|ZP_04389008.1| hypothetical protein POREN0001_1306 [Porphyromonas endodontalis
ATCC 35406]
gi|229317716|gb|EEN83614.1| hypothetical protein POREN0001_1306 [Porphyromonas endodontalis
ATCC 35406]
Length = 237
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 59/208 (28%), Gaps = 27/208 (12%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV----------FGINCH 109
G+ + L++ + G + N+ + G+
Sbjct: 32 GVKAGVNFSGLALSNDFHVLKSQMKPGADFGGFMRINLHSNFAIQPELEFFYRGIGLKAE 91
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAG--YSVDSLLIYGMGGFGGAYVIDSSL------ 161
++ + + IY L+ G + Y GF
Sbjct: 92 AGPVSLENKINQWGMQIPIYALGKLQLGNGLLYGGVGPYVGIGFSAKTDEIKKFNNLVKI 151
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY-----IPHHIHSVNNS 216
+ ++ N K + +G + I ++A Y+Y I S+NN
Sbjct: 152 DPIDLYEKHNDKSALQRWDVGIACQLGYE--FTNGIQINAGYKYGFINQIDDIKTSINNV 209
Query: 217 NAKSDVERVDRKGNAH--IASLGINMHF 242
+K + AH + ++G+ F
Sbjct: 210 TSKLGFPLQNAAYKAHASVVTVGLGYRF 237
>gi|296282343|ref|ZP_06860341.1| peptidase S10, serine carboxypeptidase [Citromicrobium
bathyomarinum JL354]
Length = 511
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 24/82 (29%), Gaps = 6/82 (7%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF---VFGINCHTTAAKDD 116
GL I RL + D N Y P+ GI+ G+ + + G
Sbjct: 352 GLTIGRLDSRYTGTDYDNAGEYPDNDPSFYGIDGGYTAAINSWARDTLGFETDREYQAIG 411
Query: 117 STFYRLKEKYFIYGDVVLKAGY 138
S R + + Y
Sbjct: 412 SDPGRY---WDWSLSGRGRGAY 430
>gi|258622340|ref|ZP_05717365.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258585356|gb|EEW10080.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 427
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 37/118 (31%), Gaps = 13/118 (11%)
Query: 136 AGYSVDSLLIYGMGGF------GGAYVIDSSLEKVESDNSKNA-----KGRFDGHGSSVV 184
AGYS DS Y M G D L V G H
Sbjct: 312 AGYSFDSFTPYAMYGKFVPKNEAYQAQSDWGLAPVNGTQLAQFQKVLIGGINSTHIDQST 371
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+GL + + ++L A Y Y+ +E + + + H+ S +N F
Sbjct: 372 FSLGLRWDITAQMALKAQYDYVEIGD--YGYGLWAVPMESISQGRDVHVLSFSVNFVF 427
>gi|171912505|ref|ZP_02927975.1| hypothetical protein VspiD_15035 [Verrucomicrobium spinosum DSM
4136]
Length = 204
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 45/147 (30%), Gaps = 1/147 (0%)
Query: 76 INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLK 135
+ + + G LG N + + FGI + D + +
Sbjct: 55 TSSGNERLIGDDAFGGGLGVNYFITRW-FGIGGEGSLFDTDGDTVGTATFNVFLRAPLGE 113
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
+G++V G+ D + + + D +G+G++Y +
Sbjct: 114 SGFAVYGFTGIGITFNADDIDSDDFDDFQDRVEDDDDPKDSDDVLLQGHVGVGIEYRFSP 173
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDV 222
+ + RY + + ++ V
Sbjct: 174 NFGIFTDARYTFVERDDSDFTLIRAGV 200
>gi|254367946|ref|ZP_04983966.1| outer membrane associated protein [Francisella tularensis subsp.
holarctica 257]
gi|134253756|gb|EBA52850.1| outer membrane associated protein [Francisella tularensis subsp.
holarctica 257]
Length = 393
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 75 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 134
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 135 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 186
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 187 PSNISGANGRAGTNMIGAGLTWFF 210
>gi|90579244|ref|ZP_01235054.1| hypothetical protein VAS14_06043 [Vibrio angustum S14]
gi|90440077|gb|EAS65258.1| hypothetical protein VAS14_06043 [Vibrio angustum S14]
Length = 203
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 61/220 (27%), Gaps = 47/220 (21%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKT------YNSLLPNGLGIEL 93
A + ++ ++G Y+G + + + T + + N +
Sbjct: 14 ASSYASASENPSNKYNGFYIGAGVGTTDFHYDKSLTSSIENNHEVDYSNKADGESYKLIA 73
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY--------GDVVLKAGYSVDSLL- 144
G+ Q V L+ K + + GY+ D+ L
Sbjct: 74 GY--QFNRIVA---LEAQYTTYGDIKNTLEVKGHKFTGKTEHQSFSLAANLGYTFDNGLR 128
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN--YDISLSAS 202
+ + G G V + F G + LG GL+Y + + + +
Sbjct: 129 PFALVGLGQISVK---------------EPGFKDDGGLIRLGAGLEYQIKQVPGLGIRTA 173
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + +N D + LG F
Sbjct: 174 YE-ADFYTLEADNK---------DYDMSVGSWYLGATYKF 203
>gi|29347184|ref|NP_810687.1| hypothetical protein BT_1774 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339083|gb|AAO76881.1| SusC homolog [Bacteroides thetaiotaomicron VPI-5482]
Length = 1101
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 59/193 (30%), Gaps = 23/193 (11%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G + + LY + I T + +GLG+ G+N+Q
Sbjct: 231 GANAAALYGSDAANGVILITTRKATKKSGLGVSYGYNMQFTFLREFPAYQNVYGSASLPA 290
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV----ESDNSKNAKGR 175
+ + + YG K GY+ D L YG+ F A S + N
Sbjct: 291 VGVGDGFNYYGS-NSKNGYAYDPSLPYGIFVFNWANPNQRSWGLPMLGFDLVGRNNQIRS 349
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG------ 229
+ + + + + + +S+ N + + + +D G
Sbjct: 350 YVPNKDGITDMYEMGVAMTHSVSV----------NKVFNGAGIRFNYTGIDYDGMLKNFD 399
Query: 230 --NAHIASLGINM 240
H L +NM
Sbjct: 400 NMKRHTFDLRVNM 412
>gi|56707711|ref|YP_169607.1| outer membrane associated protein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670182|ref|YP_666739.1| outer membrane associated protein [Francisella tularensis subsp.
tularensis FSC198]
gi|254370217|ref|ZP_04986223.1| outer membrane associated protein [Francisella tularensis subsp.
tularensis FSC033]
gi|56604203|emb|CAG45216.1| outer membrane associated protein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320515|emb|CAL08599.1| outer membrane associated protein [Francisella tularensis subsp.
tularensis FSC198]
gi|151568461|gb|EDN34115.1| outer membrane associated protein [Francisella tularensis subsp.
tularensis FSC033]
Length = 393
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 75 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 134
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 135 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 186
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 187 PSNISGANGRAGTNMIGAGLTWFF 210
>gi|325198735|gb|ADY94191.1| opacity protein [Neisseria meningitidis G2136]
Length = 224
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 170 SNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLK-------------NTRFKTHEV 216
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 217 SLGMRYHF 224
>gi|170725642|ref|YP_001759668.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169810989|gb|ACA85573.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 367
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 56/189 (29%), Gaps = 21/189 (11%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+ YVG + D K P + G+ + FG+
Sbjct: 26 TPWYVGGGVGVNDYEPSC-DLKTMKVCGKDDPYAWDVFGGYLF---NDYFGVELGYRDLG 81
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ + G ++ + + ++ + S+N +
Sbjct: 82 RGEWTDYANKRNDVGAK-----GMTLGLVGFMPLSQRWSLSAEAGAMNYLLSNNKQYGTE 136
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ G + G+G+ Y + ++ L A Y RY N + +S+ ++
Sbjct: 137 YYSDSGVAPYFGVGVGYNITENLKLQAKYRRYENLEDDKWNTLDMESNYWGLE------- 189
Query: 234 ASLGINMHF 242
++ F
Sbjct: 190 ----LSYRF 194
>gi|7443350|pir||S16614 opacity protein opaF precursor - Neisseria gonorrhoeae (strain
MS11) (fragments)
Length = 257
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 32/121 (26%), Gaps = 32/121 (26%)
Query: 141 DSLLIYGMGGFGGAYVIDS-SLEKVESDNSKNAKGRFDGH------------------GS 181
D Y +V S K + ++ G +
Sbjct: 150 DKFKPYIGARVAYGHVRHSIDSTKKTTKFLTSSYGGLNPTVYTEENTQNAHHQSNSIRRV 209
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + G+ + + ++L YRY + + H ASLG+
Sbjct: 210 GLGVIAGVGFDITPKLTLDTGYRYHYWGRLE-------------NTRFKTHEASLGVRYR 256
Query: 242 F 242
F
Sbjct: 257 F 257
>gi|296534562|ref|ZP_06896977.1| opacity family porin protein [Roseomonas cervicalis ATCC 49957]
gi|296265115|gb|EFH11325.1| opacity family porin protein [Roseomonas cervicalis ATCC 49957]
Length = 243
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 31/217 (14%), Positives = 57/217 (26%), Gaps = 31/217 (14%)
Query: 55 SGNYVGLHIS------------RLYETHPLADTINRKTYNSLLPNGLG-IELGHNIQLED 101
+G YVG ++ + G + LG+
Sbjct: 25 TGVYVGAGAGVNFLQKTDLDVTGGSAAFLRSNGVRPSGRAEFDAGFAGALALGYGFGNG- 83
Query: 102 FVFGINCHTTAAKDDS-TFYRLKEKYFIYGDVVL-----KAGYSVD----SLLIYGMGGF 151
I + D + Y G V A Y ++ Y G
Sbjct: 84 VRAEIEGNYRQNDVDKISGYTGFGPLRSSGTVRSYGAMFNAYYDFHQLNWPVVPYIGAGI 143
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN--YDISLSASYRYIPHH 209
G + + ++ N + D + GL + ++L+A YR++
Sbjct: 144 GYVWTDYDDVRASAANG-GNVRLNGDDGQFAFQGIAGLSLPITAVPGLALTAEYRFMGTL 202
Query: 210 IHSVNN----SNAKSDVERVDRKGNAHIASLGINMHF 242
V++ N + H LG+ F
Sbjct: 203 QPDVDSTIRQGNVTLARGGAEVDNYNHSIMLGLRYAF 239
>gi|323529611|ref|YP_004231763.1| cellulose synthase operon C domain-containing protein [Burkholderia
sp. CCGE1001]
gi|323386613|gb|ADX58703.1| cellulose synthase operon C domain protein [Burkholderia sp.
CCGE1001]
Length = 1616
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 25/182 (13%), Positives = 52/182 (28%), Gaps = 19/182 (10%)
Query: 61 LHISRLYETHPLADTI--NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
A Y S +G+G+ +G+ ++
Sbjct: 1285 ARFGAGLSNSSSATAAIAGTNNYGSQTASGVGLSVGYEGHS------LSGDIGVTPIGFR 1338
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+ G + K YS+ V DS L + ++ +
Sbjct: 1339 ETNIVGGGQYNGGITDKVSYSL---------AVARRAVTDSLLSYAGTRDAASGLEWGGV 1389
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS-NAKSDVERVDRKGNAHIASLG 237
+ + + D + ++A+Y+Y H + NN+ V K ++G
Sbjct: 1390 TSTGGLASLAWD-DGTNGLYVNAAYQYYQGHNVASNNAVKGGGGVYTRLFKDADQTFTVG 1448
Query: 238 IN 239
+N
Sbjct: 1449 VN 1450
>gi|6274545|gb|AAF06693.1|AF163663_18 opacity protein OpaA precursor [Neisseria meningitidis]
Length = 270
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + + ++L YRY
Sbjct: 198 GGTPTIYNQGSTQDAYHESHSIRRLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE---- 253
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ F
Sbjct: 254 ---------NTRFKTHEVSLGVRYRF 270
>gi|2150078|gb|AAC32712.1| opacity protein [Neisseria meningitidis]
Length = 243
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H A
Sbjct: 189 SNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEA 235
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 236 SLGVRYHF 243
>gi|33594614|ref|NP_882258.1| putative outer membrane protein [Bordetella pertussis Tohama I]
gi|33598741|ref|NP_886384.1| putative outer membrane protein [Bordetella parapertussis 12822]
gi|33603815|ref|NP_891375.1| putative outer membrane protein [Bordetella bronchiseptica RB50]
gi|33564690|emb|CAE44012.1| putative outer membrane protein [Bordetella pertussis Tohama I]
gi|33574871|emb|CAE39534.1| putative outer membrane protein [Bordetella parapertussis]
gi|33577940|emb|CAE35205.1| putative outer membrane protein [Bordetella bronchiseptica RB50]
gi|332384025|gb|AEE68872.1| putative outer membrane protein [Bordetella pertussis CS]
Length = 212
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G + ++ ++ + G + +G+D +N L+A RYI
Sbjct: 126 YVGVGLNYTTFFDTKTHGALEGSDLRLGDSWGLAGQLGVDVKLNERWFLNADLRYIDISS 185
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + +A++ + F
Sbjct: 186 KVKLDGQRIGTA-----RIDPWVATVAVGYRF 212
>gi|315181841|gb|ADT88754.1| outer membrane protein W [Vibrio furnissii NCTC 11218]
Length = 214
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 28/98 (28%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D + D + IG+DY +N + L+AS
Sbjct: 121 PYVGAGINYTVFFDEKFNSTGEGAGLSDLKLDDSW--GLAANIGMDYKINDNWFLNASAW 178
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + S D K N + + F
Sbjct: 179 YANIETTAKYKAGGTS--YSTDVKINPWVFMIAGGYKF 214
>gi|254496796|ref|ZP_05109649.1| hypothetical protein LDG_1234 [Legionella drancourtii LLAP12]
gi|254353981|gb|EET12663.1| hypothetical protein LDG_1234 [Legionella drancourtii LLAP12]
Length = 266
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 6/108 (5%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV--LGIGLDYMVNYD 196
+ + +Y MGG G + + + S +V +GIG++Y
Sbjct: 157 TYKQVSLYLMGGVGEGWSRLRYQDFPNEKDLGGGLSLPKETTSRLVGDVGIGINYHHTSH 216
Query: 197 ISLSASYRYIPHHIHSVNN----SNAKSDVERVDRKGNAHIASLGINM 240
IS S SY Y + + N+ + + ++H +GI+
Sbjct: 217 ISYSLSYLYTDYGHITANSYGNLNGEPVKIVAPSFLIDSHALLVGIHY 264
>gi|268591643|ref|ZP_06125864.1| porin, opacity type [Providencia rettgeri DSM 1131]
gi|291312944|gb|EFE53397.1| porin, opacity type [Providencia rettgeri DSM 1131]
Length = 228
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 55/206 (26%), Gaps = 24/206 (11%)
Query: 56 GNYVGLHISRLYETHPLADTINRKT-----YNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
G Y +S++++ DT +R + L Q + +
Sbjct: 28 GYYAAARLSKVWQKADNMDTSSRPGIGQFVSGDDKDDFYNGSLAAGYQFGNG-WRTEAEY 86
Query: 111 TA---AKDDSTFYRLKEKYFIYGDVVLKAGYSVDS-------LLIYGMGGFGGAYVIDSS 160
T A+ S + + + + IYG G G A V S
Sbjct: 87 TFNKKAEYTSGSTTFPTSLNHHKTESQRLMLNAYRDYEIYQGVSIYGTAGVGIAKVKSSG 146
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
N LG G+ Y ++ YRY+ + +
Sbjct: 147 W----QGNVSRQYASNTDTNLVYSLGAGVSYEPINKLNFDLGYRYVDLGKIESGMNRFAN 202
Query: 221 DVERVDRKGNAHI----ASLGINMHF 242
D + AH+ G+ F
Sbjct: 203 ARGLQDEQMKAHLKSQEVIFGVRYLF 228
>gi|85710653|ref|ZP_01041717.1| hypothetical protein NAP1_09587 [Erythrobacter sp. NAP1]
gi|85687831|gb|EAQ27836.1| hypothetical protein NAP1_09587 [Erythrobacter sp. NAP1]
Length = 667
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 49/169 (28%), Gaps = 2/169 (1%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF-GINCHTTAAKDDSTFYR 121
S + + + +EL ++ F G + D T
Sbjct: 446 GSAYWALGEDRNNFFTGEKADINAQFAAVELSYDRDWARFRLSGAFQSGDSDPYDDTEGG 505
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+ Y + + + GG A + + + + + F+ G
Sbjct: 506 FDAIFENPVFAGADTSYWIRQTIPFAGGGRAVAVNGRNGILNNLRSSKEQGQSNFNNPGL 565
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
++G+G D+ + + LSA+ ++ S + + +
Sbjct: 566 -WLVGVGADFDLTPEFRLSANANHLWFENTSSLEALRVEGSIPSEIGYD 613
>gi|254374174|ref|ZP_04989656.1| outer membrane associated protein [Francisella novicida GA99-3548]
gi|151571894|gb|EDN37548.1| outer membrane associated protein [Francisella novicida GA99-3548]
Length = 393
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 75 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 134
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 135 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 186
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 187 PSNISGANGRAGTNMIGAGLTWFF 210
>gi|73539248|ref|YP_299615.1| OmpW [Ralstonia eutropha JMP134]
gi|72122585|gb|AAZ64771.1| OmpW [Ralstonia eutropha JMP134]
Length = 216
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 13/102 (12%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
++ Y G + ++ + N + D + L IG+DY + + L+
Sbjct: 128 GTIRPYVGAGL--------NFTRIWGADIANNTLQLDNWSVAPALQIGMDYKLTKNWFLN 179
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A + + S V + + S+G+ F
Sbjct: 180 ADIKKVWLGSDVKAGGEKISKVN-----LDPWLFSMGVGYRF 216
>gi|87309314|ref|ZP_01091450.1| hypothetical protein DSM3645_21964 [Blastopirellula marina DSM
3645]
gi|87287953|gb|EAQ79851.1| hypothetical protein DSM3645_21964 [Blastopirellula marina DSM
3645]
Length = 321
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 35/120 (29%), Gaps = 9/120 (7%)
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG- 174
++ LK + G+S + ++ G + V ++ V + +
Sbjct: 172 NAIATSLKSQIIDQIAFRPYVGHSFGTGFVFVGAGPTLSNVRTEIVDLVGFADINGTRSN 231
Query: 175 --------RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
G +G+ + L SY + + N ++ S + D
Sbjct: 232 ISGAPQDFSDSGWVWGGSAEVGVTHFFCRSWFLECSYVFGVTGNKTFNFNSTFSSPDPSD 291
>gi|224456780|ref|ZP_03665253.1| outer membrane associated protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254874523|ref|ZP_05247233.1| fopA, outer membrane associated protein [Francisella tularensis
subsp. tularensis MA00-2987]
gi|254840522|gb|EET18958.1| fopA, outer membrane associated protein [Francisella tularensis
subsp. tularensis MA00-2987]
gi|282158878|gb|ADA78269.1| outer membrane associated protein [Francisella tularensis subsp.
tularensis NE061598]
Length = 392
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 74 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 133
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 134 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 185
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 186 PSNISGANGRAGTNMIGAGLTWFF 209
>gi|110639837|ref|YP_680047.1| hypothetical protein CHU_3470 [Cytophaga hutchinsonii ATCC 33406]
gi|110282518|gb|ABG60704.1| hypothetical protein CHU_3470 [Cytophaga hutchinsonii ATCC 33406]
Length = 311
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 47/189 (24%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDD 116
Y I+ + L G+ G N ++ V G +
Sbjct: 45 YYRGPITFTLGAGMTNYRGDLTKGLGLNGLSYGLSAGANYKIWPHIVLGAE--FSYLNLQ 102
Query: 117 STFYRLKEKYFIYGD-----VVLKAGYSVDSLL----------------IYGMGGFGGAY 155
ST Y V + Y +D ++ Y G GG
Sbjct: 103 STDYNKSRNGSFNATAMELQVYGRL-YIIDEIIRVAPDRRKESHYTFCKPYLQAGLGGML 161
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ + + + + +G GL + + SL A Y Y ++
Sbjct: 162 FTSTYKYNSGKEYTVETEFAPI-----LPVGFGLQFTITQRSSLCAEYIYRFTLTDLIDY 216
Query: 216 SNAKSDVER 224
+
Sbjct: 217 TTYNGSGND 225
>gi|320106608|ref|YP_004182198.1| hypothetical protein AciPR4_1381 [Terriglobus saanensis SP1PR4]
gi|319925129|gb|ADV82204.1| hypothetical protein AciPR4_1381 [Terriglobus saanensis SP1PR4]
Length = 192
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 43/159 (27%), Gaps = 32/159 (20%)
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSL 143
+ G G + + +G+ + AK + + G V+ Y +
Sbjct: 65 VDLKGFGGYATFDWREH---YGVELNIRHAKGKQDDGQSENTVEFGGRYVVVRKY---RM 118
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
Y G + N LG+G+DY I++ A Y
Sbjct: 119 APYAKAMIGRGVYNYPDGAGSLAFNL-------------YALGVGVDYHATSYINVRAEY 165
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + N + S+G+ F
Sbjct: 166 EYQSWLNVPIQN-------------PQPQLISIGVAYRF 191
>gi|304411789|ref|ZP_07393401.1| OmpA domain-containing protein [Shewanella baltica OS183]
gi|307306159|ref|ZP_07585904.1| OmpA domain-containing protein [Shewanella baltica BA175]
gi|304349977|gb|EFM14383.1| OmpA domain-containing protein [Shewanella baltica OS183]
gi|306911032|gb|EFN41459.1| OmpA domain-containing protein [Shewanella baltica BA175]
Length = 186
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 54/198 (27%), Gaps = 33/198 (16%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
Q +G YVG + ADT + + G ++ FG+
Sbjct: 20 QVSAATDTTGFYVGGAL-----NRVTADTFGGSETGTGVGVYGGYN------FNEW-FGL 67
Query: 107 NCHTTAAKD--DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ A D D + D Y G V
Sbjct: 68 EANLFATGDLGDKDVDISAGALSFTPKFTAQIN---DIFSAYAKVGIASMAVNVDGYGY- 123
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
D G G+G++ + +++ SY + + + +S +
Sbjct: 124 ----------DEDFTGFGWTYGVGVNAAITEHLNIRVSYD-----VTTGDLDADRSYLGL 168
Query: 225 VDRKGNAHIASLGINMHF 242
D + ++G++ F
Sbjct: 169 KDIDTDIKQFAVGVHYQF 186
>gi|293608448|ref|ZP_06690751.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829021|gb|EFF87383.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 428
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 2/94 (2%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G ++ + + K + +G G Y + D L A Y ++
Sbjct: 253 VGRLNHKFANGSMLSGRSFVAEKRTNHDEEVAWGVGFGGKYQITPDTLLKADYYHVKGDG 312
Query: 211 HSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ SN+ ++ + SLGI F
Sbjct: 313 RFLLWSNSGYAIDDQNNMHSNEFDTVSLGITHQF 346
>gi|255536293|ref|YP_003096664.1| Thrombospondin type 3 repeat:OmpA/MotB [Flavobacteriaceae bacterium
3519-10]
gi|255342489|gb|ACU08602.1| Thrombospondin type 3 repeat:OmpA/MotB [Flavobacteriaceae bacterium
3519-10]
Length = 477
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 30/100 (30%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
++G G G + K D G GL Y VN I L
Sbjct: 161 RWALHGYAGIGSIGYRAYVEDAAGQRLVTEVKPSLDKWSLFGQAGAGLKYKVNRRIDLEG 220
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
Y+ S + + + N A+LG+++
Sbjct: 221 RLMYVVTTDDSFDGGAGQYNAREEQVSDNFMNATLGLSLK 260
>gi|68249016|ref|YP_248128.1| hypothetical protein NTHI0539 [Haemophilus influenzae 86-028NP]
gi|229846501|ref|ZP_04466609.1| hypothetical protein CGSHi7P49H1_07510 [Haemophilus influenzae
7P49H1]
gi|68057215|gb|AAX87468.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
gi|229810594|gb|EEP46312.1| hypothetical protein CGSHi7P49H1_07510 [Haemophilus influenzae
7P49H1]
Length = 70
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 13/52 (25%)
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + +I+L YRY + + H AS G+ F
Sbjct: 32 YDITPNITLDLDYRYNDWGRLE-------------NVRFKTHEASFGVRYRF 70
>gi|260774296|ref|ZP_05883211.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
gi|260611257|gb|EEX36461.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
Length = 320
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 58/211 (27%), Gaps = 53/211 (25%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL------GIE 92
N E D SG ++G K + L G G+
Sbjct: 18 AVSVNAETHSDSAIDQSGWWIGAASGVTTADGKSITGHRDKAVSPKLELGYDVNQYWGVY 77
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGF 151
G++ +RL G + +K Y +D+L ++G G
Sbjct: 78 TGYDY---------------------VHRLGVDKLHIGSLGVKGQYELMDNLSVFGKLGA 116
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
Y SS + +A GIGL+Y + IS Y Y
Sbjct: 117 SYIYSDISSSNIKTDTFTGSA-------------GIGLEYQLTNAISTKVGYDYYD---- 159
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V ++ + H G+ F
Sbjct: 160 RVQVKEGRN--------PHLHQIYWGMAYKF 182
>gi|254497930|ref|ZP_05110694.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
gi|254352824|gb|EET11595.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
Length = 254
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/110 (10%), Positives = 32/110 (29%), Gaps = 5/110 (4%)
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIG 188
G +V GY V + G G + + + +G G
Sbjct: 141 GKLVADRGYFVTPW-VSASIGVGFNQANSYMSWPLIEEAVPTPDFSNHMTTAFTYTVGAG 199
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ + + + Y + + ++ ++ + H+ + G+
Sbjct: 200 VQRNLTQNCQVGIGYEFADWGHSHLGRADGQTTRRGLAL---NHLYTNGL 246
>gi|221067826|ref|ZP_03543931.1| OmpW family protein [Comamonas testosteroni KF-1]
gi|220712849|gb|EED68217.1| OmpW family protein [Comamonas testosteroni KF-1]
Length = 204
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 28/103 (27%), Gaps = 12/103 (11%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+ Y G + S + + L IG DY ++ + SL
Sbjct: 114 FGAFKPYVGAGVNYTRFSNVS--------ILDGAVTVKKNSFGGALQIGFDYALDKNWSL 165
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + K + + +G+ F
Sbjct: 166 NFDVKKVYLGTKV----TGAGVFQDTKFKVDPWLVGVGVGYRF 204
>gi|115315051|ref|YP_763774.1| outer membrane protein FopA [Francisella tularensis subsp.
holarctica OSU18]
gi|115129950|gb|ABI83137.1| outer membrane protein FopA [Francisella tularensis subsp.
holarctica OSU18]
Length = 393
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 75 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 134
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 135 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 186
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 187 PSNISGANGRAGTNMIGAGLTWFF 210
>gi|60392864|sp|Q04877|OPAI_NEIGO RecName: Full=Opacity protein opA54; Flags: Precursor
Length = 282
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 15/71 (21%)
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G V G+G+D + ++L A YRY + +
Sbjct: 227 ESRSISSLGFGAVAGVGID--ITPKLTLDAGYRYHNWGRLE-------------NTRFKT 271
Query: 232 HIASLGINMHF 242
H ASLG+ F
Sbjct: 272 HEASLGVRYRF 282
>gi|325132609|gb|EGC55300.1| opacity protein [Neisseria meningitidis M6190]
Length = 268
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 29/123 (23%), Gaps = 34/123 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH--------------------- 179
D Y +V S ++ +
Sbjct: 159 DKFKPYIGARVAYGHVRHSIDSTKKTTEVVTSTHGGADTKPTIYNGESTQNAYHESHSIR 218
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 219 RLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 265
Query: 240 MHF 242
HF
Sbjct: 266 YHF 268
>gi|307721753|ref|YP_003892893.1| membrane protein involved in aromatic hydrocarbon degradation
[Sulfurimonas autotrophica DSM 16294]
gi|306979846|gb|ADN09881.1| membrane protein involved in aromatic hydrocarbon degradation
[Sulfurimonas autotrophica DSM 16294]
Length = 415
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 38/114 (33%), Gaps = 1/114 (0%)
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
+G V K ++ ++ + K + V + +G
Sbjct: 303 FGTVKPKEWKDTNTFRFGLTQELKNMTLMAGLVIDEAPAPEKTIGFELPDTDT-VSVSLG 361
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y +N I L S Y H +V++S + ++ G+ I S G+ F
Sbjct: 362 GRYKINDKIDLGLSALYSMHDKRTVSSSVNDNGLDGEFTDGDVIIISAGLGYKF 415
>gi|183598197|ref|ZP_02959690.1| hypothetical protein PROSTU_01579 [Providencia stuartii ATCC 25827]
gi|188020364|gb|EDU58404.1| hypothetical protein PROSTU_01579 [Providencia stuartii ATCC 25827]
Length = 228
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 34/102 (33%), Gaps = 8/102 (7%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG G G A V S N+ G + +G G+ Y ++ YR
Sbjct: 131 VYGTVGLGVAKVKSSGW----QGNAARQYGSNTDTNLAYSIGAGVSYEPIDKLNFDLGYR 186
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHI----ASLGINMHF 242
YI + + D + AH+ LG+ F
Sbjct: 187 YIDLGKIESGMNRFANARGIQDEQMKAHLKSQELVLGVRYLF 228
>gi|940799|emb|CAA79370.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 237
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 24/86 (27%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + +++L A YRY
Sbjct: 165 GTTPTVYPGKNTQDAHRESDSIRRVGLGAVAGVGIDITPNLTLDAGYRYHYWGRLE---- 220
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 221 ---------NTRFKTHEASLGVRYRF 237
>gi|323527553|ref|YP_004229706.1| OmpW family protein [Burkholderia sp. CCGE1001]
gi|323384555|gb|ADX56646.1| OmpW family protein [Burkholderia sp. CCGE1001]
Length = 241
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 47/190 (24%), Gaps = 15/190 (7%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
P + +GI G+ + +FV G S K
Sbjct: 52 GGSPTNIVEANTGATLSSADTIGITAGYFVTDHIAAEFVVGYPPSFDLNGTGSLERFGKL 111
Query: 125 KYFIYGDVVLKAGYSVD----SLLIYGMGGFGGAYVIDS--SLEKVESDNSKNAKGRFDG 178
L Y + + Y G + D + E++
Sbjct: 112 GQAKQWSPTLLFKYYFNAPTATFRPYLGIGVSRIWFTDEKITNGTFEANVLHGPTSVTTD 171
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI----- 233
V G Y N S Y+P + N+ A + V ++ + I
Sbjct: 172 SSWEPVFNAGFTYAFNQHWFAGVSVSYLPLSTTAKLNTQASTPVGTLNVQSQTKIKLNPI 231
Query: 234 -ASLGINMHF 242
+ I F
Sbjct: 232 VTYVNIGYRF 241
>gi|163637017|gb|ABY27329.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia cameroni]
Length = 201
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 55/175 (31%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
++ Y+ L P+ + +++D + + + I V +
Sbjct: 35 DKSDYSPLKPSFIAGGGAFGYKMDDIRVDVEGVYSYLNKNDVTDARFTPDTIADSVTAIS 94
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 95 GLVNVYYDIAIEDMPITSYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 146
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY H + + S + D + A G+ +F
Sbjct: 147 GVSYDVTPEVKLYAGARYFGSHGANFDKSGGEKDKGGYTVLYSTVGAEAGVAFNF 201
>gi|254428274|ref|ZP_05041981.1| hypothetical protein ADG881_1504 [Alcanivorax sp. DG881]
gi|196194443|gb|EDX89402.1| hypothetical protein ADG881_1504 [Alcanivorax sp. DG881]
Length = 487
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 34/122 (27%), Gaps = 12/122 (9%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-----DS 142
G G + + D+ + + T D T + V + G
Sbjct: 356 GAGGVVASGWR--DWFLLVPFNVTWTDSDKTTLEGRA-----FTVSPRVGRGFALNRAGR 408
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L ++ G + + + + + + L G ++ V +S+
Sbjct: 409 LTVFAGGNYLDVRTVAAGSLAIPGTDQVLDYKVDQSNSDRWNLVAGANWDVTPRLSVMLE 468
Query: 203 YR 204
Y
Sbjct: 469 YD 470
>gi|91794084|ref|YP_563735.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91716086|gb|ABE56012.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 377
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 10/180 (5%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+ YVG + P D KT P + G+ + FG+
Sbjct: 30 TPWYVGGGVGVN-NYEPSCDLKTMKTCGKDDPYAWDVFGGYMF---NEYFGLELGYR--- 82
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D + DV + G S+ + + + + + S+ + +
Sbjct: 83 -DLGRAEWTDYSNKSHDVGAR-GASLGLVALIPLANNWSITAEAGAFNYLLSNKKQTSTE 140
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ G + +G G+ Y ++ L A Y RY + + + +S+ +
Sbjct: 141 YYSDSGVAPYIGAGIGYNFTENLMLQAKYRRYETLNEKQWDTLSMESNYWGLALSYRFGT 200
>gi|319410261|emb|CBY90602.1| Opacity protein opA58 Flags: Precursor [Neisseria meningitidis WUE
2594]
Length = 272
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 30/123 (24%), Gaps = 33/123 (26%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--------------------H 179
D Y +V S ++ N G +
Sbjct: 163 FDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIR 222
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 223 RLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 269
Query: 240 MHF 242
F
Sbjct: 270 YRF 272
>gi|194098413|ref|YP_002001472.1| outer membrane protein [Neisseria gonorrhoeae NCCP11945]
gi|193933703|gb|ACF29527.1| outer membrane protein [Neisseria gonorrhoeae NCCP11945]
Length = 224
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+ V ++L A YRY + + H A
Sbjct: 170 NRSSRRLGFGAMAGVGIDVAPGLTLDAGYRYHYWGRLE-------------NTRFKTHEA 216
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 217 SLGVRYRF 224
>gi|89256632|ref|YP_513994.1| outer membrane associated protein [Francisella tularensis subsp.
holarctica LVS]
gi|167011028|ref|ZP_02275959.1| outer membrane associated protein [Francisella tularensis subsp.
holarctica FSC200]
gi|89144463|emb|CAJ79767.1| outer membrane associated protein [Francisella tularensis subsp.
holarctica LVS]
Length = 392
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 74 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 133
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 134 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 185
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 186 PSNISGANGRAGTNMIGAGLTWFF 209
>gi|169656658|ref|YP_001428834.2| OmpA (outer membrane protein A) family protein [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|164551726|gb|ABU61878.2| OmpA (outer membrane protein A) family protein [Francisella
tularensis subsp. holarctica FTNF002-00]
Length = 393
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 75 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 134
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 135 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 186
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 187 PSNISGANGRAGTNMIGAGLTWFF 210
>gi|328676839|gb|AEB27709.1| Outer membrane protein A precursor [Francisella cf. novicida Fx1]
Length = 392
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 74 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 133
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 134 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 185
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 186 PSNISGANGRAGTNMIGAGLTWFF 209
>gi|308449627|ref|XP_003088023.1| hypothetical protein CRE_29390 [Caenorhabditis remanei]
gi|308250281|gb|EFO94233.1| hypothetical protein CRE_29390 [Caenorhabditis remanei]
Length = 478
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 6/102 (5%)
Query: 142 SLLIY-GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
Y G+GG + S + K D G + +G + +
Sbjct: 382 RFTPYIGVGGTAFLAWDEESSGALAGTKVKV----KDDFGFAGQIGFNFQPADAKNWGVF 437
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
RY V + + D + I +LG + F
Sbjct: 438 FDARYAQL-SPEVTVKAGNTTAAKFDLDIDPVIYTLGYSYRF 478
>gi|258626724|ref|ZP_05721546.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580980|gb|EEW05907.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 427
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 37/118 (31%), Gaps = 13/118 (11%)
Query: 136 AGYSVDSLLIYGMGGF------GGAYVIDSSLEKVESDNSKNA-----KGRFDGHGSSVV 184
AGYS DS Y M G D L V G H
Sbjct: 312 AGYSFDSFTPYAMYGKFVPKNEAYQAQSDWGLAPVNGTQLAQFQKVLIGGINSTHIDQST 371
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+GL + + ++L A Y Y+ +E + + + H+ S +N F
Sbjct: 372 FSLGLRWDITAQMALKAQYDYVEIGD--YGYGLWAVPMESISQGRDVHVLSFSVNFVF 427
>gi|293399269|ref|ZP_06643434.1| opacity protein opA52 [Neisseria gonorrhoeae F62]
gi|291610683|gb|EFF39793.1| opacity protein opA52 [Neisseria gonorrhoeae F62]
Length = 251
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+ V ++L A YRY + + H A
Sbjct: 197 SNSSRRLGFGAMAGVGIDVAPGLTLDAGYRYHNWGRLE-------------NTRFKTHEA 243
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 244 SLGVRYRF 251
>gi|238794941|ref|ZP_04638539.1| Outer membrane protein W [Yersinia intermedia ATCC 29909]
gi|238725759|gb|EEQ17315.1| Outer membrane protein W [Yersinia intermedia ATCC 29909]
Length = 215
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D D + G+DYMV+ + L+
Sbjct: 118 DKLRPYLGIGLNYTTFFDEKFNNTGQGAGLTDLSVKDSW--GIAGQAGMDYMVSENWMLN 175
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S +I N + ++ + + + G F
Sbjct: 176 MSVWWINIETDVKFKQNGQ--EHSINTRLDPWVFMFGAGYRF 215
>gi|325130548|gb|EGC53301.1| opacity protein [Neisseria meningitidis OX99.30304]
gi|325130810|gb|EGC53544.1| opacity protein [Neisseria meningitidis OX99.30304]
Length = 226
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 28/124 (22%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV---------------- 184
D Y +V + +K + V
Sbjct: 116 DKFKPYIGARVAYGHVKHQVHSVETKTTTVTSKPKNGSPQGGAVPSREPSKPPYHESNSI 175
Query: 185 ------LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ G+ + + ++L YRY + + H SLG+
Sbjct: 176 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 222
Query: 239 NMHF 242
F
Sbjct: 223 RYRF 226
>gi|290953550|ref|ZP_06558171.1| outer membrane protein FopA [Francisella tularensis subsp.
holarctica URFT1]
gi|295313154|ref|ZP_06803836.1| outer membrane protein FopA [Francisella tularensis subsp.
holarctica URFT1]
Length = 392
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 74 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 133
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 134 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 185
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 186 PSNISGANGRAGTNMIGAGLTWFF 209
>gi|254372716|ref|ZP_04988205.1| outer membrane associated protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570443|gb|EDN36097.1| outer membrane associated protein [Francisella novicida GA99-3549]
Length = 393
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 75 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 134
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 135 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 186
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 187 PSNISGANGRAGTNMIGAGLTWFF 210
>gi|24216380|ref|NP_713861.1| hypothetical protein LA_3681 [Leptospira interrogans serovar Lai
str. 56601]
gi|24197664|gb|AAN50879.1| hypothetical protein LA_3681 [Leptospira interrogans serovar Lai
str. 56601]
Length = 445
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 61/186 (32%), Gaps = 18/186 (9%)
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDF---VFGINCHTTAAKDDSTFYRLKEKY 126
+ + T R +N L G E NI + F FG + + ++ + + L E
Sbjct: 180 NSGSTTRLRYVWNRLTFELRGTEAKQNIDVNGFQTLAFGTSSESESSGERTVNAILGEMN 239
Query: 127 FIYGDVVLKAGYSVDSLLIY---GMGGFGGAYVIDSSL-------EKVESDNSKNAKGRF 176
+ V + G++ + +GG + S D S+ + +
Sbjct: 240 TKFQKVSSRVGFTPYPHPVLDLQILGGIERMWTRTSQEVDSIGQKTGSGIDPSRISFREY 299
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSNAKSDVERVDRKGNAHIAS 235
H LGIG ++ +L ++ S N+ + D + N
Sbjct: 300 SSHHKGYSLGIGFEWKFLKRFTLQGQILHLDMTGPSSFRNNEYRMDSSNQMLRLNQ---- 355
Query: 236 LGINMH 241
G++
Sbjct: 356 FGLDYR 361
>gi|325138142|gb|EGC60715.1| opacity protein [Neisseria meningitidis ES14902]
gi|325204451|gb|ADY99904.1| opacity protein [Neisseria meningitidis M01-240355]
Length = 224
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 29/123 (23%), Gaps = 34/123 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH--------------------- 179
D Y +V S ++ +
Sbjct: 115 DKFKPYIGARVAYGHVRHSIDSTKKTTEVVTSTHGGADTKPTIYNGESTQNAYHESHSIR 174
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 175 RLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 221
Query: 240 MHF 242
HF
Sbjct: 222 YHF 224
>gi|262170595|ref|ZP_06038273.1| hypothetical protein VII_001406 [Vibrio mimicus MB-451]
gi|261891671|gb|EEY37657.1| hypothetical protein VII_001406 [Vibrio mimicus MB-451]
Length = 426
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 37/118 (31%), Gaps = 13/118 (11%)
Query: 136 AGYSVDSLLIYGMGGF------GGAYVIDSSLEKVESDNSKNA-----KGRFDGHGSSVV 184
AGYS DS Y M G D L V G H
Sbjct: 311 AGYSFDSFTPYAMYGKFVPKNEAYQAQSDWGLAPVNGTQLAQFQKVLIGGINSTHIDQST 370
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+GL + + ++L A Y Y+ +E + + + H+ S +N F
Sbjct: 371 FSLGLRWDITAQMALKAQYDYVEIGD--YGYGLWAVPMESISQGRDVHVLSFSVNFVF 426
>gi|116622003|ref|YP_824159.1| hypothetical protein Acid_2888 [Candidatus Solibacter usitatus
Ellin6076]
gi|116225165|gb|ABJ83874.1| hypothetical protein Acid_2888 [Candidatus Solibacter usitatus
Ellin6076]
Length = 225
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 26/106 (24%), Gaps = 21/106 (19%)
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
G + YG+ G G + + A +V G G Y V
Sbjct: 123 GVPIKKWEPYGIFGLGVLM--NPYTAALLDATGAVAYVGQRHSKFAVQYGAGCRYNVGER 180
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ A YRY N + G+ F
Sbjct: 181 WGVKAEYRY-------------------TSSAQNFNRIMGGVYYRF 207
>gi|332184172|gb|AEE26426.1| OmpA family protein [Francisella cf. novicida 3523]
Length = 392
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 74 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNVNKYFAVQYNQLVGRVFAGLGEGVVNFSN 133
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
S++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 134 STMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 185
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 186 PSNISGANGRAGTNMIGAGLTWFF 209
>gi|118497351|ref|YP_898401.1| OmpA family protein [Francisella tularensis subsp. novicida U112]
gi|195536039|ref|ZP_03079046.1| outer membrane associated protein [Francisella tularensis subsp.
novicida FTE]
gi|208779140|ref|ZP_03246486.1| outer membrane associated protein [Francisella novicida FTG]
gi|118423257|gb|ABK89647.1| OmpA family protein [Francisella novicida U112]
gi|194372516|gb|EDX27227.1| outer membrane associated protein [Francisella tularensis subsp.
novicida FTE]
gi|208744940|gb|EDZ91238.1| outer membrane associated protein [Francisella novicida FTG]
Length = 392
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 74 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 133
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 134 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 185
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 186 PSNISGANGRAGTNMIGAGLTWFF 209
>gi|30025841|gb|AAP04425.1| outer membrane protein P1 [Coxiella burnetii]
Length = 252
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 54/191 (28%), Gaps = 29/191 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYN------------SLLPNGLGIELGHNIQLEDFV 103
G ++GL T+ T+ T S+ +G ELG+ + ++
Sbjct: 35 GFHIGLGFGYKSYTYDQVGTVTVTTNGGTVLSVLHPVSASITQSGPVGELGYTFASDWWI 94
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-----------IYGMGGFG 152
G+ S ++ G ++L +Y G+
Sbjct: 95 AGVKAQYQYDNVRSVHIMDAPLVGSNYSYRIRLGSHFTAMLLAGIKVNEANAVYLEAGYS 154
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + + + GIG + ++ L SY Y + S
Sbjct: 155 TVWGKTTLFGP------GPVAVSIKNRLNGGIAGIGWRHYFMNNVFLDLSYDYALYRSKS 208
Query: 213 VNNSNAKSDVE 223
+ + + +
Sbjct: 209 NSVTLSSATAS 219
>gi|73543060|ref|YP_297580.1| OmpW [Ralstonia eutropha JMP134]
gi|72120473|gb|AAZ62736.1| OmpW [Ralstonia eutropha JMP134]
Length = 241
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 40/143 (27%), Gaps = 9/143 (6%)
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVES 166
D + +L VV+K + + Y G + D ++ +
Sbjct: 99 DVKGTGDYGQYGKLGSVRQWSPAVVVKYHFFDAKTKFRPYVGLGVNYTWFTDETITNQDF 158
Query: 167 -----DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS--VNNSNAK 219
+ V +G Y + + + S Y+P + +N
Sbjct: 159 VNHAFGIPGAKMTANAESSWNPVFNVGASYAITDNWFVGLSVSYLPLSTRATLTTQANGV 218
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ V K + + L + F
Sbjct: 219 TIVSHTKIKIDPVVTFLSVGYKF 241
>gi|16127724|ref|NP_422288.1| OmpA family protein [Caulobacter crescentus CB15]
gi|221236545|ref|YP_002518982.1| cell surface antigen Sca2 [Caulobacter crescentus NA1000]
gi|13425220|gb|AAK25456.1| OmpA family protein [Caulobacter crescentus CB15]
gi|220965718|gb|ACL97074.1| cell surface antigen Sca2 [Caulobacter crescentus NA1000]
Length = 449
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 28/234 (11%), Positives = 60/234 (25%), Gaps = 24/234 (10%)
Query: 25 AVDLYLPRKIDLFNEADNN------VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINR 78
AVDL + E++ + W+G + + +
Sbjct: 78 AVDLGQHWPQSISTESNQTLPDGEYAHWAWKTDKDWTGF---VRLGYQFNK-----NWRA 129
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY 138
+ P L G+ ++ + T + + +
Sbjct: 130 EVEGGYRPGDLKAVRGNAVRQQPVALCTPGVTRTSSSQRCGSPDGSIDSWSLMANVIYDF 189
Query: 139 SVDSLL-IYGMGGFGGAYVIDSSLE--------KVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ DS L + G G + +L + +N D + G
Sbjct: 190 APDSWLNPFVGAGVGVNRLDVKTLGQFSGVGAVTPGNVAVQNLTVDDDDMAVAWQAIAGA 249
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSN-AKSDVERVDRKGNAHIASLGINMHF 242
+ + +YRY+ HS +S + ++G+ F
Sbjct: 250 SIKATDKLKVDVTYRYLTGSDHSWQSSGSGLLQPGAFSGQYTDQSLTVGLRYSF 303
>gi|304386711|ref|ZP_07368984.1| opacity protein [Neisseria meningitidis ATCC 13091]
gi|304339226|gb|EFM05307.1| opacity protein [Neisseria meningitidis ATCC 13091]
Length = 224
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 28/125 (22%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH-------------------- 179
D Y +V + + +K
Sbjct: 113 FDKFKPYIGARVAYGHVKHQVHSVRKETTTTFSKAGAGATEPGKIILGPISKPAYHESHS 172
Query: 180 --GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ + G+ + + ++L YRY + + H SLG
Sbjct: 173 TSSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 219
Query: 238 INMHF 242
+ F
Sbjct: 220 MRYRF 224
>gi|296314535|ref|ZP_06864476.1| opacity protein opA51 [Neisseria polysaccharea ATCC 43768]
gi|296838700|gb|EFH22638.1| opacity protein opA51 [Neisseria polysaccharea ATCC 43768]
Length = 238
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 30/228 (13%), Positives = 55/228 (24%), Gaps = 56/228 (24%)
Query: 56 GNYVGLHISRLYETHPLADTIN----RKTYNSLLPNGLGIELGHNIQLEDFVFGIN---- 107
G YV ++ YE Y + + L ++ ++
Sbjct: 26 GPYVQADLAYAYEHITYDYPGYNAKVFDDYRDIKTHSTHPRLSVGYDFGNWRIALDYARY 85
Query: 108 ----------CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD---------SLLIYGM 148
T S +L+ + G ++ Y + Y
Sbjct: 86 NTWRHGKHIHLEQTKNPTPSVTAKLEADHTDKGTFKAESNYGISAIYDFDTGTRFKPYAG 145
Query: 149 GGFGGAYVIDSSL--------------EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
G + S + G V G+G+D +
Sbjct: 146 IRVGLGKIRHSIAVEDQQTITVNNIKRGPTNVHPPLHESHSIRRVGFGAVAGVGID--IT 203
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++L YRY + + H ASLG+ F
Sbjct: 204 PNLTLDTGYRYHYWGHLE-------------NTRFKTHEASLGVRYRF 238
>gi|188533739|ref|YP_001907536.1| hypothetical protein ETA_15970 [Erwinia tasmaniensis Et1/99]
gi|188028781|emb|CAO96643.1| Putative exported protein [Erwinia tasmaniensis Et1/99]
Length = 210
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 32/104 (30%), Gaps = 4/104 (3%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
Y G + + D + + V +G+DY + +
Sbjct: 111 DASKWQPYAGIGVNYTMFYHTDFNQTGRDAGLSDLSVKNSW--GVAGQVGMDYQLTPEWM 168
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y+ N+ + +D + N + +G F
Sbjct: 169 LNASLWYMNIDTKVSFNAGD--SRQSIDTRINPWVFFIGAGYRF 210
>gi|121635150|ref|YP_975395.1| pseudogene (opacity protein) [Neisseria meningitidis FAM18]
gi|120866856|emb|CAM10615.1| pseudogene (opacity protein) [Neisseria meningitidis FAM18]
Length = 266
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 29/123 (23%), Gaps = 34/123 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH--------------------- 179
D Y +V S ++ +
Sbjct: 157 DKFKPYIGARVAYGHVRHSIDSTKKTTEVVTSTHGGADTKPTIYNGESTQNAYHESHSIR 216
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 217 RLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 263
Query: 240 MHF 242
HF
Sbjct: 264 YHF 266
>gi|251789781|ref|YP_003004502.1| outer membrane protein W [Dickeya zeae Ech1591]
gi|247538402|gb|ACT07023.1| OmpW family protein [Dickeya zeae Ech1591]
Length = 210
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S D L Y G D + D V GLDY +N
Sbjct: 108 FGQSADKLRPYLGVGLNYTTFFDEKFNQTGKDAGLTDLNLKSSW--GVAAQAGLDYNLNK 165
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D L+ S ++ + + + + + + + G F
Sbjct: 166 DWLLNMSVWWMDIDTTVKFKAAGQD--QSIKTRLDPWVFMFGFGYKF 210
>gi|261213962|ref|ZP_05928243.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260915569|gb|EEX82430.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
Length = 75
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 11/34 (32%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
W+G Y+G I + L+D
Sbjct: 36 QEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSD 69
>gi|253571922|ref|ZP_04849327.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298387493|ref|ZP_06997045.1| outer membrane protein [Bacteroides sp. 1_1_14]
gi|251838519|gb|EES66605.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298259700|gb|EFI02572.1| outer membrane protein [Bacteroides sp. 1_1_14]
Length = 1085
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 59/193 (30%), Gaps = 23/193 (11%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G + + LY + I T + +GLG+ G+N+Q
Sbjct: 215 GANAAALYGSDAANGVILITTRKATKKSGLGVSYGYNMQFTFLREFPAYQNVYGSASLPA 274
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE----KVESDNSKNAKGR 175
+ + + YG K GY+ D L YG+ F A S + N
Sbjct: 275 VGVGDGFNYYGS-NSKNGYAYDPSLPYGIFVFNWANPNQRSWGLPMLGFDLVGRNNQIRS 333
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG------ 229
+ + + + + + +S+ N + + + +D G
Sbjct: 334 YVPNKDGITDMYEMGVAMTHSVSV----------NKVFNGAGIRFNYTGIDYDGMLKNFD 383
Query: 230 --NAHIASLGINM 240
H L +NM
Sbjct: 384 NMKRHTFDLRVNM 396
>gi|83720146|ref|YP_443520.1| OmpW family outer membrane protein [Burkholderia thailandensis
E264]
gi|83653971|gb|ABC38034.1| outer membrane protein, OmpW family [Burkholderia thailandensis
E264]
Length = 243
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 25/196 (12%), Positives = 51/196 (26%), Gaps = 19/196 (9%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGINCHTTAAKDDST 118
++ H + +T + +G+ G+ + + + V GI S
Sbjct: 52 NVGGTPVNHEVPNTGAGID----NADTIGLAAGYFLTDHIVTELVAGIPPRFNLNGKGSL 107
Query: 119 FYRLKEKYFIYGDVVLKAGYSVD----SLLIYGMGGFGGAYVID--SSLEKVESDNSKNA 172
+ + Y + Y G + + E
Sbjct: 108 EQFGVLGHAYQWSPAVLLKYYFNDAKAKFRPYVGIGASYIWFTGAKITNSAFERGALGGP 167
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ + V+ G Y S YIP + + + + + + + A
Sbjct: 168 TSVQTSNQWAPVINAGFTYNFTDHWFGGLSVSYIPVSLTATLTTQRPTPIGTLTQTSQAK 227
Query: 233 IAS------LGINMHF 242
IA L I F
Sbjct: 228 IALNPIVTYLNIGYRF 243
>gi|2642249|gb|AAC45979.1| opacity protein [Neisseria meningitidis]
Length = 232
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 29/118 (24%)
Query: 141 DSLLIYGMGGFGGAYVID--------------SSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D Y +V ++ V + SSV LG
Sbjct: 128 DKFKPYIGVRVAYGHVKHQVHSVESKTTTVTTNNGGPVPQGPTPKPAYHESHSISSVGLG 187
Query: 187 --IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ + + ++L YRY + + H SLG+ HF
Sbjct: 188 VIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMRYHF 232
>gi|59800533|ref|YP_207245.1| outer membrane opacity protein B [Neisseria gonorrhoeae FA 1090]
gi|59717428|gb|AAW88833.1| outer membrane opacity protein B [Neisseria gonorrhoeae FA 1090]
Length = 265
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 24/90 (26%), Gaps = 14/90 (15%)
Query: 154 AYVIDSSLEKVESDNSKNAKG-RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + + KN G+ V ++L A YRY
Sbjct: 189 SDADAAVTVYPDGHPQKNTYQKSNSSRRLGFGAMAGVGIDVAPGLTLDAGYRYHNWGRLE 248
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 249 -------------NTRFKTHEASLGMRYRF 265
>gi|330446560|ref|ZP_08310212.1| ompA-like transmembrane domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328490751|dbj|GAA04709.1| ompA-like transmembrane domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 203
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 57/201 (28%), Gaps = 43/201 (21%)
Query: 56 GNYVGLHISRLYETHP----LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G YVG + L + N I G+ + + + T
Sbjct: 32 GFYVGAGVGTTDFHDDRESFLKNNHTVGYSNDGGAESYKIIAGYQF---NRIVSLEAQYT 88
Query: 112 AAK-------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK 163
A + K K+ + + GY+ D+ L + GFG + DS ++
Sbjct: 89 AYGDVKYTLETNGIKATGKTKHESF-SLAANLGYTFDNGLRPFATVGFGQISLKDSMIKD 147
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVN--YDISLSASYRYIPHHIHSVNNSNAKSD 221
LG GL+Y V + + A+Y + + +
Sbjct: 148 DGGLIR---------------LGAGLEYQVKQVPGLGIRAAYEADFYTLET--------- 183
Query: 222 VERVDRKGNAHIASLGINMHF 242
D + LG F
Sbjct: 184 -AVKDFDQSVGSWYLGTTYKF 203
>gi|217331211|gb|ACK38249.1| OmpW [Vibrio cholerae]
Length = 172
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 32/106 (30%), Gaps = 4/106 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S + D + G+DYM+N
Sbjct: 71 FGEANSTFRPYVGAGLNYTTFFDESFNGTGRSATLTDLKLDDSW--GLAANAGVDYMLND 128
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
L+AS Y + + A D + D K N + +
Sbjct: 129 SWFLNASVWYANIETTATYKAGA--DAKSTDVKINPWVFMIAGGYK 172
>gi|325199770|gb|ADY95225.1| opacity protein [Neisseria meningitidis H44/76]
Length = 232
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 178 SNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 224
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 225 SLGMRYHF 232
>gi|146307557|ref|YP_001188022.1| membrane protein involved in aromatic hydrocarbon degradation
[Pseudomonas mendocina ymp]
gi|145575758|gb|ABP85290.1| membrane protein involved in aromatic hydrocarbon degradation
[Pseudomonas mendocina ymp]
Length = 529
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 12/140 (8%)
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLK-AGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESD 167
T ST +L+ ++ L+ GYS ++ I + + +D
Sbjct: 343 LTYPDAFSTGIKLRPLDKWQFNLDLRWVGYSDWNNFEIEFDRELDLLRIAKTFGGGNATD 402
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY----IPHHIHSVNNSNAKSDVE 223
S + G+G+ Y VN ++L A Y Y IP + V +D+
Sbjct: 403 RSIILDRGYRDT---WSWGVGVQYDVNDRLALRAGYEYRPSAIPKNKADVLAPVGDADLY 459
Query: 224 RVDRKG---NAHIASLGINM 240
+ +G N
Sbjct: 460 GLGLGYRWDKDTTIDVGFNY 479
>gi|114569146|ref|YP_755826.1| OmpW family protein [Maricaulis maris MCS10]
gi|114339608|gb|ABI64888.1| OmpW family protein [Maricaulis maris MCS10]
Length = 206
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 10/102 (9%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y G + D+ L + S + F + G+D+ ++ D ++
Sbjct: 115 GQVRPYVGAGVNYTHFFDADLPAGSALTSIDYDASF-----GLAAQAGVDFALDDDWFVN 169
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+YI ++ + D + + + +G+ F
Sbjct: 170 VDVKYID-----IDTDVTINGAIAADVQIDPVVFGIGLGRRF 206
>gi|297185499|gb|ADI24129.1| outer membrane protein W [Aeromonas hydrophila]
Length = 196
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 6/92 (6%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G + ++ + + + +GLD +N ++AS +
Sbjct: 111 YVGTGINYTTFFDEQGRGPLSNADVSLDTSWGMAGQVGLDMAINDRWFVNASAWIMDIDT 170
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ V ++ + G+ F
Sbjct: 171 ------DVHPAVGAINNSSDTMTFMFGVGYRF 196
>gi|240128895|ref|ZP_04741556.1| outer membrane protein [Neisseria gonorrhoeae SK-93-1035]
gi|268687278|ref|ZP_06154140.1| outer membrane protein [Neisseria gonorrhoeae SK-93-1035]
gi|268627562|gb|EEZ59962.1| outer membrane protein [Neisseria gonorrhoeae SK-93-1035]
Length = 135
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 13/96 (13%)
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G GA +++ + + + G+ + + ++L A YRY
Sbjct: 53 ITGLLTGARGAGAAVYTSYKNTQDAHHQSNSIRRVGLGVIAGVGFDITPKLTLDAGYRYH 112
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 113 NWGRLE-------------NTRFKTHEASLGMRYRF 135
>gi|417415|sp|Q04880|OPAK_NEIGO RecName: Full=Opacity protein opA57; Flags: Precursor
gi|940797|emb|CAA79368.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 237
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 24/86 (27%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + +++L A YRY
Sbjct: 165 GTTPTVYPGKNTQDAHRESDSIRRVGLGAVAGVGIDITPNLTLDAGYRYHYWGRLE---- 220
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 221 ---------NTRFKTHEASLGVRYRF 237
>gi|110597655|ref|ZP_01385940.1| outer surface protein, putative [Chlorobium ferrooxidans DSM 13031]
gi|110340775|gb|EAT59252.1| outer surface protein, putative [Chlorobium ferrooxidans DSM 13031]
Length = 210
Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 9/98 (9%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+ M G G A + + ++ + + G G+ + +++ YR
Sbjct: 122 PFVMAGVGIANIQNKEQYPADA--TGVTVTGTSNGVFAWQAGAGVGVNASDKVTIDLEYR 179
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y SNA+ + LG+ F
Sbjct: 180 Y-------FAASNAEGFAADRVVDISTSNLLLGVRYGF 210
>gi|118592712|ref|ZP_01550102.1| hypothetical protein SIAM614_01449 [Stappia aggregata IAM 12614]
gi|118434763|gb|EAV41414.1| hypothetical protein SIAM614_01449 [Stappia aggregata IAM 12614]
Length = 75
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD---VERVDRKGNA 231
+ LG + + ++S YRY+ + D + +D +
Sbjct: 5 GDGKTDFAWGLGGSVGIGLTQNVSFDVGYRYMDLGKFEAGTLSRCIDKEFTQGIDSNYST 64
Query: 232 HIASLGINMHF 242
LGI F
Sbjct: 65 QEIILGIRYTF 75
>gi|2642265|gb|AAC45987.1| opacity protein [Neisseria meningitidis]
Length = 238
Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 31/123 (25%), Gaps = 33/123 (26%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--------------------H 179
D Y +V S ++ N G +
Sbjct: 129 FDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIR 188
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 189 RLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 235
Query: 240 MHF 242
HF
Sbjct: 236 YHF 238
>gi|325201839|gb|ADY97293.1| opacity protein [Neisseria meningitidis M01-240149]
Length = 228
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 15/90 (16%)
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
GA V + L+K S + G V+ G+G + + ++L YRY
Sbjct: 154 GAKVGGTILDKSMSKPPYHESNSISSLGLGVIAGVG--FDITPKLTLDTGYRYHNWGRLE 211
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ F
Sbjct: 212 -------------NTRFKTHEVSLGMRYRF 228
>gi|206578835|ref|YP_002239545.1| outer membrane protein X [Klebsiella pneumoniae 342]
gi|288936390|ref|YP_003440449.1| virulence-related outer membrane protein [Klebsiella variicola
At-22]
gi|290510555|ref|ZP_06549925.1| outer membrane protein X [Klebsiella sp. 1_1_55]
gi|206567893|gb|ACI09669.1| outer membrane protein X [Klebsiella pneumoniae 342]
gi|288891099|gb|ADC59417.1| virulence-related outer membrane protein [Klebsiella variicola
At-22]
gi|289777271|gb|EFD85269.1| outer membrane protein X [Klebsiella sp. 1_1_55]
Length = 171
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 42/139 (30%), Gaps = 10/139 (7%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
T + + G L + + ++ G+ T + D+T
Sbjct: 22 AFAATSTVTGGYAQSDMQGKANKAGGFNLKYRYEQDNNPLGVIGSFTYTEKDNTSNGTYN 81
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K YG A D IYG+ G G +++ + D
Sbjct: 82 KGQYYGITAGPAYRLNDWASIYGVVGVGYGKFQNNNF----------PNQKSDMSDYGFS 131
Query: 185 LGIGLDYMVNYDISLSASY 203
G GL + +++L SY
Sbjct: 132 YGAGLQFNPIENVALDFSY 150
>gi|315125307|ref|YP_004067310.1| outer membrane protein; signal peptide [Pseudoalteromonas sp.
SM9913]
gi|315013820|gb|ADT67158.1| putative outer membrane protein; signal peptide [Pseudoalteromonas
sp. SM9913]
Length = 354
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 54/188 (28%), Gaps = 42/188 (22%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN-CHTTAAK 114
G Y+G + N G G ELG+ + + +
Sbjct: 26 GFYIGAFGDYYDASWKNMREQAGLDVN--ESTGWGAELGYRF-NDYWSARLEYADLDFNA 82
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D + I G+ Y +D L + GG ++ V+ + NA
Sbjct: 83 HDKVLNN---RNDIDGER-----YGID-ALYHFGGGPFYGLFGLKDIDVVDDNTFVNA-- 131
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+G + V + ++A S + +D+ A
Sbjct: 132 -----------GVGYRHFVTDNFFVNAE----------------TSVYQGLDKGYTDVGA 164
Query: 235 SLGINMHF 242
LGIN F
Sbjct: 165 KLGINYFF 172
>gi|322434041|ref|YP_004216253.1| hypothetical protein AciX9_0401 [Acidobacterium sp. MP5ACTX9]
gi|321161768|gb|ADW67473.1| hypothetical protein AciX9_0401 [Acidobacterium sp. MP5ACTX9]
Length = 281
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 44/153 (28%), Gaps = 10/153 (6%)
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
G+ + + + + + +T F G + + Y G G
Sbjct: 128 GYEVNFAYTRL-VENYISESGGATTSTGATVGTFTRGSIGTNV---YELSGAYVAKGPGA 183
Query: 154 AYVIDSSLEKVESDNSKNAKG----RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
+ + + + ++V+ G G+DY ++ + L YR + +
Sbjct: 184 TRRLQTFMLGGPAMLIFQPTTKQYQGSSSVRAAVLFGSGVDYRLSDHLGLRVEYRGLFYK 243
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ V + N S + F
Sbjct: 244 NPDFAAVISNVPVSKQFTVTNEPTVS--LTYRF 274
>gi|7443351|pir||S16613 opacity protein opaB precursor - Neisseria gonorrhoeae (strain
MS11) (fragments)
Length = 338
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 32/121 (26%), Gaps = 32/121 (26%)
Query: 141 DSLLIYGMGGFGGAYVIDS-SLEKVESDNSKNAKGRFDGH------------------GS 181
D Y +V S K + ++ G +
Sbjct: 231 DKFKPYIGARVAYGHVRHSIDSTKKTTKFLTSSYGGLNPTVYTEENTQNAHHQSNSIRRV 290
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + G+ + + ++L YRY + + H ASLG+
Sbjct: 291 GLGVIAGVGFDITPKLTLDTGYRYHYWGRLE-------------NTRFKTHEASLGVRYR 337
Query: 242 F 242
F
Sbjct: 338 F 338
>gi|325203549|gb|ADY99002.1| opacity protein [Neisseria meningitidis M01-240355]
Length = 229
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 175 SHSTSSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 221
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 222 SLGMRYHF 229
>gi|238797312|ref|ZP_04640812.1| Outer membrane protein W [Yersinia mollaretii ATCC 43969]
gi|238718743|gb|EEQ10559.1| Outer membrane protein W [Yersinia mollaretii ATCC 43969]
Length = 215
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D + D V G+DYMV+ + L+
Sbjct: 118 DKLRPYLGIGLNYTTFFDEKFNSTGTAAGLTDLSVKDSW--GVAGQAGMDYMVSENWMLN 175
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ + + ++ + + + G F
Sbjct: 176 MSVWWMNIESDVKFKAGGV--EQSINTRLDPWVFMFGAGYRF 215
>gi|7443364|pir||S16610 opacity protein opaK precursor - Neisseria gonorrhoeae (strain
MS11) (fragments)
Length = 261
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 24/86 (27%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + +++L A YRY
Sbjct: 189 GTTPTVYPGKNTQNAHRESDSIRRVGLGAVAGVGIDITPNLTLDAGYRYHYWGRLE---- 244
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 245 ---------NTRFKTHEASLGVRYRF 261
>gi|154707720|ref|YP_001425101.1| outer membrane porin P1 [Coxiella burnetii Dugway 5J108-111]
gi|154357006|gb|ABS78468.1| outer membrane porin P1 [Coxiella burnetii Dugway 5J108-111]
Length = 239
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 29/209 (13%), Positives = 60/209 (28%), Gaps = 28/209 (13%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLP------------NGLGIELGHNIQLEDFV 103
G ++GL T+ T+ T + G ELG+ + ++
Sbjct: 35 GFHIGLGFGYKSYTYDQVGTVTVTTGGGTVLGVLHPVSASITQFGPVGELGYTFASDWWI 94
Query: 104 FGINCHTTAAKDDSTFY-RLKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGGAYVIDSSL 161
G+ S + + +L AG V+ +Y G+ + +
Sbjct: 95 AGVKAQYQYDNVRSVHIMDAHSRLGSHLTAMLLAGIKVNEANAVYLEAGYSTVWGKTTLF 154
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + GIG + ++ L SY Y + S + + ++
Sbjct: 155 GP------GPVAVSMKNRLNGGIAGIGWRHYFMNNVFLDLSYDYALYRSKSNSVTLPSAE 208
Query: 222 VERVDRKGNAHI--------ASLGINMHF 242
+ G + +N F
Sbjct: 209 ETAIGVSGTVQNPKRVAINGITATVNYLF 237
>gi|94499465|ref|ZP_01306002.1| outer membrane protein OprG [Oceanobacter sp. RED65]
gi|94428219|gb|EAT13192.1| outer membrane protein OprG [Oceanobacter sp. RED65]
Length = 226
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 3/99 (3%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D + + + + G+DY + + ++AS
Sbjct: 130 PYVGAGLNITVFFDEETGAGAEGLGYDELSL--DNSVGLAVQAGVDYAFDEKMFVNASVM 187
Query: 205 YIPHHIH-SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y ++++S + V+ + + + F
Sbjct: 188 YAKIGTEATLSDSTGTAPDLTVNYDLDPLVYRVNFGYKF 226
>gi|29654562|ref|NP_820254.1| OmpA-like transmembrane domain-containing protein [Coxiella
burnetii RSA 493]
gi|81628854|sp|Q83C69|Y1260_COXBU RecName: Full=Uncharacterized protein CBU_1260; Flags: Precursor
gi|29541830|gb|AAO90768.1| OmpA-like transmembrane domain protein [Coxiella burnetii RSA 493]
Length = 248
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 57/223 (25%), Gaps = 46/223 (20%)
Query: 55 SGNYVGLHISRL-----YETHPLADT----INRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
+G YV T + T N+ G + + F
Sbjct: 37 AGFYVRGEAGYGLVDKKSGTSKVNFTGVTLTENSHTNTKKSRGFNGRVAIGYAFNPY-FS 95
Query: 106 INCHTTAA-----KDDSTFYRLKEKYFIYGDVV-----------LKAGYSVDSLLIYGMG 149
+ T + L + + KA +D+ + G
Sbjct: 96 LESGFTYYHPAYRDVNIAGSALPLFSSVQAEGRQKINLYSIDLMGKATLPIDNFYAFIEG 155
Query: 150 GFGGAYVIDSSLEKVESDNS-------KNAKGRFDGHGSSVV---LGIGLDYMVNYDISL 199
G + + + + S + + + GIG+ Y + +I +
Sbjct: 156 GVAYVHTKFVAFTETGTAVSPLLPPVTSSVAVKVPSSSKGYIRPKAGIGVGYNITQNIGV 215
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SY + + + + N + +LG+ F
Sbjct: 216 DVSYSRVF----------GQGKINNTNYLPNLNAVTLGLTYKF 248
>gi|325138653|gb|EGC61211.1| opacity protein V28 precursor [Neisseria meningitidis ES14902]
Length = 112
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 29/123 (23%), Gaps = 34/123 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH--------------------- 179
D Y +V S ++ +
Sbjct: 3 DKFKPYIGARVAYGHVRHSIDSTKKTTEVVTSTHGGADTKPTIYNGESTQNAYHESHSIR 62
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 63 RLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 109
Query: 240 MHF 242
HF
Sbjct: 110 YHF 112
>gi|299770601|ref|YP_003732627.1| putative protein (DcaP-like) [Acinetobacter sp. DR1]
gi|298700689|gb|ADI91254.1| putative protein (DcaP-like) [Acinetobacter sp. DR1]
Length = 428
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G ++ + + + K + + +G G Y + D L A Y ++
Sbjct: 253 VGRLNHKFANGSMLSARSLVAEKRTNNDEQVAWGVGFGGKYQITPDTLLKADYYHVKGDG 312
Query: 211 HSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ SN+ ++ + SLGI F
Sbjct: 313 RFLLWSNSGYAIDDQNNMHSNEFDTISLGITHQF 346
>gi|260769308|ref|ZP_05878241.1| outer membrane protein W precursor [Vibrio furnissii CIP 102972]
gi|260614646|gb|EEX39832.1| outer membrane protein W precursor [Vibrio furnissii CIP 102972]
Length = 214
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 28/98 (28%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D + D + IG+DY +N + L+AS
Sbjct: 121 PYVGAGINYTVFFDEKFNSTGEGAGLSDLKLDDSW--GLAANIGMDYKINDNWFLNASAW 178
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + S D K N + + F
Sbjct: 179 YANIETTAKYKAGGTS--YSTDVKINPWVFMIAGGYKF 214
>gi|154706583|ref|YP_001424697.1| OmpA-like transmembrane domain protein [Coxiella burnetii Dugway
5J108-111]
gi|161830804|ref|YP_001597112.1| OmpA-like transmembrane domain-containing protein [Coxiella
burnetii RSA 331]
gi|154355869|gb|ABS77331.1| OmpA-like transmembrane domain protein [Coxiella burnetii Dugway
5J108-111]
gi|161762671|gb|ABX78313.1| ompA-like transmembrane domain protein [Coxiella burnetii RSA 331]
Length = 248
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 58/223 (26%), Gaps = 46/223 (20%)
Query: 55 SGNYVGLHISRL-----YETHPLADT----INRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
+G YV T + T N+ G + + F
Sbjct: 37 AGFYVRGEAGYGLVDKKSGTSKVNFTGVTLTENSHTNTKKSRGFNGRVAIGYAFNPY-FS 95
Query: 106 INCHTTAA-----KDDSTFYRLKEKYFIYGDVV-----------LKAGYSVDSLLIYGMG 149
+ T + L + + KA +D+ + G
Sbjct: 96 LESGFTYYHPAYRDVNIAGSALPLFSSVQAEGRQKINLYSIDLMGKATLPIDNFYAFIEG 155
Query: 150 GFGGAYVIDSSLEKVESDNS-------KNAKGRFDGHGSSVV---LGIGLDYMVNYDISL 199
G + ++ + + S + + + GIG+ Y + +I +
Sbjct: 156 GVAYVHTKFAAFTETGTAVSPLLPPVTSSVAVKVPSSSKGYIRPKAGIGVGYNITQNIGV 215
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SY + + + + N + +LG+ F
Sbjct: 216 DVSYSRVF----------GQGKINNTNYLPNLNAVTLGLTYKF 248
>gi|91785416|ref|YP_560622.1| OmpW family outer membrane porin [Burkholderia xenovorans LB400]
gi|91689370|gb|ABE32570.1| outer membrane porin, OmpW family [Burkholderia xenovorans LB400]
Length = 241
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 48/190 (25%), Gaps = 15/190 (7%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
P T + + +GI G+ + + V G S K
Sbjct: 52 GGSPTNITEANTGASLSSADTIGITAGYFVTDHIAAELVVGYPPSFDLEGSGSLAQFGKL 111
Query: 125 KYFIYGDVVLKAGYSVDS----LLIYGMGGFGGAYVIDSSLEKV--ESDNSKNAKGRFDG 178
L Y ++ Y G + D + E++
Sbjct: 112 GQAKQWSPTLLFKYYFNAPTAAFRPYLGVGVSRIWFTDEKITNSAFEANVLHGPTSVTTD 171
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI----- 233
V G Y N S Y+P + ++ A + V ++ + I
Sbjct: 172 SSWEPVFNAGFTYAFNQHWFAGFSVSYLPLSTTAKLSTAANTPVGTLNVQSQTKIKLNPI 231
Query: 234 -ASLGINMHF 242
+ I F
Sbjct: 232 VTYVNIGYRF 241
>gi|325138977|gb|EGC61527.1| opacity protein [Neisseria meningitidis ES14902]
Length = 268
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 27/124 (21%), Gaps = 34/124 (27%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK---------------------GRFDG 178
D Y +V + +K
Sbjct: 158 FDKFKPYIGARVAYGHVKHQVHSVETETTTVFSKPKGTTVPGIISEKPISKPPYHESNSI 217
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 218 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 264
Query: 239 NMHF 242
F
Sbjct: 265 RYRF 268
>gi|2315237|emb|CAA44822.1| Opa1700 outer membrane protein [Neisseria meningitidis]
Length = 262
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 29/123 (23%), Gaps = 34/123 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH--------------------- 179
D Y +V S ++ +
Sbjct: 153 DKFKPYIGARVAYGHVRHSIDSTKKTTEVVTSTHGGADTKPTIYNGESTQNAYHESHSIR 212
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 213 RLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 259
Query: 240 MHF 242
HF
Sbjct: 260 YHF 262
>gi|59801851|ref|YP_208563.1| OpaD [Neisseria gonorrhoeae FA 1090]
gi|59718746|gb|AAW90151.1| outer membrane opacity protein D [Neisseria gonorrhoeae FA 1090]
Length = 278
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 24/90 (26%), Gaps = 14/90 (15%)
Query: 154 AYVIDSSLEKVESDNSKNAKG-RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + + KN G+ V ++L A YRY
Sbjct: 202 SDADAAVTVYPDGHPQKNTYQKSNSSRRLGFGAMAGVGIDVAPGLTLDAGYRYHNWGRLE 261
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 262 -------------NTRFKTHEASLGMRYRF 278
>gi|121634729|ref|YP_974974.1| pseudogene (opacity protein) [Neisseria meningitidis FAM18]
gi|120866435|emb|CAM10181.1| pseudogene (opacity protein) [Neisseria meningitidis FAM18]
Length = 263
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 27/124 (21%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V + +K ++
Sbjct: 153 DKFKPYIGARVAYGHVKHQVHSVETKTTTVTSKPTATSPQGGPIIQTDPSKPPYHESHSI 212
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H SLG+
Sbjct: 213 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 259
Query: 239 NMHF 242
F
Sbjct: 260 RYRF 263
>gi|85712360|ref|ZP_01043410.1| hypothetical protein OS145_06604 [Idiomarina baltica OS145]
gi|85693803|gb|EAQ31751.1| hypothetical protein OS145_06604 [Idiomarina baltica OS145]
Length = 169
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 43/143 (30%), Gaps = 12/143 (8%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELG--HNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
+ + +S + + G + +F+F D + Y +
Sbjct: 24 WSVSGGFTSFQDDIDSSESLSLGALHGGLGYTFDRGNFIFMPELRVGFGIGDDSAYGVDV 83
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
+ + L+ Y+++ G +V S S + A D +
Sbjct: 84 EVDNFVIASLRGQYNINDSF--------GIFVQPSYGRLEVSASGSGASFSNDDWETG-- 133
Query: 185 LGIGLDYMVNYDISLSASYRYIP 207
+G G Y + + S+ A Y
Sbjct: 134 IGTGASYKLGKNASIEAMYEQFD 156
>gi|325142657|gb|EGC65046.1| opacity protein [Neisseria meningitidis 961-5945]
gi|325198599|gb|ADY94055.1| opacity protein [Neisseria meningitidis G2136]
Length = 223
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 23/86 (26%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + + ++L YRY
Sbjct: 151 GTAPTIYNQGSTQNAYHESHSIRRLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLK---- 206
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ HF
Sbjct: 207 ---------NTRFKTHEVSLGMRYHF 223
>gi|270647462|ref|ZP_06222192.1| outer membrane protein P5 [Haemophilus influenzae HK1212]
gi|270317227|gb|EFA28813.1| outer membrane protein P5 [Haemophilus influenzae HK1212]
Length = 237
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 39/126 (30%), Gaps = 14/126 (11%)
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD-----VVLKAGYSVD 141
G+ G+ I L G+ R + + + LK Y V
Sbjct: 3 FTYGVFGGYQI-LNQNNLGLAVELGYDDFGRAKGRKEGRTVAKHTNHGTHLSLKGSYEVL 61
Query: 142 SLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ L +YG G + +S + +G +Y V ++++
Sbjct: 62 NGLDVYGKAGVALVRSDYKFYPIDNHKDG-------HRVRASGLFAVGAEYAVLPELAVR 114
Query: 201 ASYRYI 206
Y+++
Sbjct: 115 LEYQWL 120
>gi|227499113|ref|ZP_03929248.1| predicted protein [Acidaminococcus sp. D21]
gi|226904560|gb|EEH90478.1| predicted protein [Acidaminococcus sp. D21]
Length = 216
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 43/138 (31%), Gaps = 8/138 (5%)
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
G+ T A + + + + Y + L YG GG+
Sbjct: 87 GLGLDYTYASHEGDDNASVQSHQV------NLVYQFNPYL-YGFGGYVRNRAHHRGYTDN 139
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ A GR ++ G+ + + Y + +V+ +++K
Sbjct: 140 TNGFQVGATGRLPLGKTTPWAKFGIGNTITQY-EVGVGYAITDNWEANVSYNDSKYKDFS 198
Query: 225 VDRKGNAHIASLGINMHF 242
D H ++G++ F
Sbjct: 199 GDTDVKTHGVNVGVSYKF 216
>gi|149907715|ref|ZP_01896462.1| hypothetical protein PE36_07497 [Moritella sp. PE36]
gi|149809385|gb|EDM69314.1| hypothetical protein PE36_07497 [Moritella sp. PE36]
Length = 419
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 18/151 (11%), Positives = 45/151 (29%), Gaps = 14/151 (9%)
Query: 92 ELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
+G + +D + T ++ D + + + A Y ++ Y +
Sbjct: 283 FIGLGVSYDDGDLLVVAEWTKSEVDGGATSAEGNWPDVDSAYITAAYRFGNITPYMT--Y 340
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
D + + N GL Y +N +++L Y
Sbjct: 341 AIMETTDDNERDLNPVNKAVFNAVRS------TYSAGLRYDINANMALKFDVTYSD---- 390
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + + + + + +NM F
Sbjct: 391 --DFADTNGGLTGNIGEEDTMVYTTSLNMVF 419
>gi|90412812|ref|ZP_01220812.1| hypothetical protein P3TCK_26075 [Photobacterium profundum 3TCK]
gi|90326171|gb|EAS42598.1| hypothetical protein P3TCK_26075 [Photobacterium profundum 3TCK]
Length = 319
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 62/239 (25%), Gaps = 56/239 (23%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
+L V ++ + + A+ + N+ D+ G W I
Sbjct: 2 KLKSLSLSVLAALSLGVATQAM---------ADDAVANDATQSVDKAGFW--------IG 44
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
+ + +E G++ G+ D
Sbjct: 45 AGMGMGIVDSNDLSNVGGTGEAFSSKLEAGYDFNKN---VGLYTSYDYMHDLGNADLH-- 99
Query: 125 KYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
G + +K Y L ++G G + A+G D +
Sbjct: 100 ----LGTLGVKGNYYFTQDLSVFGKLGATYIF----------------AEGEIDDSFTG- 138
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+GL+Y + +S Y Y ++ + + H G+ F
Sbjct: 139 TAGVGLEYQLTNAVSTKIGYDYY------------QNLELNQGQDTDLHQVYWGMTYKF 185
>gi|332704979|ref|ZP_08425064.1| carbohydrate-selective porin, OprB family [Lyngbya majuscula 3L]
gi|332356156|gb|EGJ35611.1| carbohydrate-selective porin, OprB family [Lyngbya majuscula 3L]
Length = 626
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 41/155 (26%), Gaps = 6/155 (3%)
Query: 76 INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLK 135
+ N + G G G Q D + + T + +S F + V L
Sbjct: 385 SSFGFNNYIYDLGFGAGAGIYYQFNDLIATGAAYYTGSASNSDFGLFNGAFGALAQVTLT 444
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
L Y ++ + + SS LG+ Y +
Sbjct: 445 PSDRFGMALTYVR----YYSPQTANTASFLGSQFAQSPFGSNTATSSNSLGVSTSYRFSD 500
Query: 196 DISLS--ASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+L Y S+NN+N +
Sbjct: 501 RFTLGGWLGYSNAIAESSSINNNNGFDVSSGSEAD 535
>gi|1841508|gb|AAC46103.1| opacity outermembrane protein [Neisseria meningitidis]
Length = 256
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 29/123 (23%), Gaps = 34/123 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH--------------------- 179
D Y +V S ++ +
Sbjct: 147 DKFKPYIGARVAYGHVRHSIDSTKKTTEVVTSTHGGADTKPTIYNGESTQNAYHESHSIR 206
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 207 RLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 253
Query: 240 MHF 242
HF
Sbjct: 254 YHF 256
>gi|114564837|ref|YP_752351.1| outer membrane protein [Shewanella frigidimarina NCIMB 400]
gi|114336130|gb|ABI73512.1| outer membrane protein [Shewanella frigidimarina NCIMB 400]
Length = 669
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 48/183 (26%), Gaps = 14/183 (7%)
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG-INCHTTAAKDDSTFYRLKEKYFIYGD 131
D + G ++ NIQ ++ G + + + D
Sbjct: 485 KDEYDDTKIGLTESEDYGYDVNVNIQFNQYIDGYVFGSQQWINSNQAGSQSFSSSDWQDD 544
Query: 132 V---VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV----- 183
+ + G + + G + S+ +S
Sbjct: 545 IEDEFINIGTGLSYSGLMQDRLIVGIDYLFSNSISDTLVHSYIGSTDTRSTYGDYYSYSH 604
Query: 184 VLGIGLDYMVNYDISLSASYRY-----IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ DY ++ ++L +YRY VN+ + ++ NAH L
Sbjct: 605 SASMYADYALSEQMALKLTYRYERYFDTDAANVGVNDIAGMITLGDINHNYNAHQVMLAF 664
Query: 239 NMH 241
Sbjct: 665 TYK 667
>gi|325136491|gb|EGC59095.1| opacity protein [Neisseria meningitidis M0579]
Length = 253
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 199 SHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 245
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 246 SLGVRYHF 253
>gi|325134908|gb|EGC57541.1| opacity protein [Neisseria meningitidis M13399]
Length = 228
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 30/101 (29%), Gaps = 15/101 (14%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
I GGA E S + G V+ G+G + + +++L
Sbjct: 143 KTTIVTTAPTGGAQKGGVISEATISKPPYHQSHSISSLGLGVIAGVG--FDITPNLTLDT 200
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YRY + + H SLG+ F
Sbjct: 201 GYRYHNWGRLE-------------NTRFKTHEVSLGMRYRF 228
>gi|315126671|ref|YP_004068674.1| TonB-dependent receptor protein [Pseudoalteromonas sp. SM9913]
gi|315015185|gb|ADT68523.1| TonB-dependent receptor protein [Pseudoalteromonas sp. SM9913]
Length = 189
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 42/155 (27%), Gaps = 16/155 (10%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G I + D+ N ++ L +G Q + ++ D
Sbjct: 34 YTG--IGYGQYSFQFEDSENDTDFDD-DAQMLKGYIG--TQFNEH---LSLELAYQNFDE 85
Query: 118 TFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + + + + +Y GG+ + V S + G
Sbjct: 86 VSDIDSKAEIDGVSLAARFAAPITEDFSVYAKGGWFEWDADLTQELPVGSVSVSQDGGD- 144
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
V G G++Y ++ + Y
Sbjct: 145 ------VFYGAGIEYAFTTNMQVRLEYERYELDDD 173
>gi|238786440|ref|ZP_04630357.1| Outer membrane protein W [Yersinia bercovieri ATCC 43970]
gi|238712653|gb|EEQ04748.1| Outer membrane protein W [Yersinia bercovieri ATCC 43970]
Length = 215
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D + D + G+DYMV+ + L+
Sbjct: 118 DKLRPYLGIGLNYTTFFDEKFNSTGTAAGLTDLSVKDSW--GIAGQAGMDYMVSENWMLN 175
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ + + + + + + G F
Sbjct: 176 MSVWWMNIESDVKFKAGGV--EQSISTRLDPWVFMFGAGYRF 215
>gi|254428713|ref|ZP_05042420.1| OmpW family [Alcanivorax sp. DG881]
gi|196194882|gb|EDX89841.1| OmpW family [Alcanivorax sp. DG881]
Length = 227
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 3/105 (2%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--HGSSVVLGIGLDYMVNYDI 197
+ + Y G D S++ + +G D+++N +
Sbjct: 124 LGPVRGYLGAGVNYTLFFDDSIDDAVVSPLLGGADVDVKLSNSVGFAWEVGADFLINENW 183
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS I + N + V+++D + + + +G+ F
Sbjct: 184 LLNASVWNIDIDTEARLYVN-DARVDKIDVEIDPWVYMVGVGYRF 227
>gi|83859524|ref|ZP_00953044.1| outer membrane protein W precursor [Oceanicaulis alexandrii
HTCC2633]
gi|83851883|gb|EAP89737.1| outer membrane protein W precursor [Oceanicaulis alexandrii
HTCC2633]
Length = 215
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 6/103 (5%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y G + L + + F + L G+DY +N L+
Sbjct: 118 GQVRPYLGAGVNYTIFFNDDLPSGTILDGIDYDPSF-----GLALQAGVDYAINERWFLN 172
Query: 201 ASYRYIPHHIH-SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + +V+ S A + V D + I +G +
Sbjct: 173 FDVKKVWINTDVTVDASTALNAVVNADVDIDPWIVGVGFGWRY 215
>gi|281420786|ref|ZP_06251785.1| putative immunoreactive antigen PG32 [Prevotella copri DSM 18205]
gi|281405078|gb|EFB35758.1| putative immunoreactive antigen PG32 [Prevotella copri DSM 18205]
Length = 381
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 53/190 (27%), Gaps = 23/190 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G+++ K N +G+ LG + + A
Sbjct: 31 WYLGVNVGAA---TKTTHNAWFKNVN----PSVGVRLG-KWFTPVWGAAVEADLYARN-- 80
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
K + G G + L G G + + + ++
Sbjct: 81 -RNLPYTHKTLVRGASGKFIGTINATNLFLGYKG----EPRKFEIIPLAGIGAYHSFNLH 135
Query: 177 DGHGSSVVLGIGLDYMVN----YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+G+ +++ G+D+ N + + + N + D +A
Sbjct: 136 NGNLNALTANAGVDFAFNLGANKAWQVYVEPSMNWFLHDNKSACNG----CQFDVNKSAF 191
Query: 233 IASLGINMHF 242
+G+N F
Sbjct: 192 QVKVGVNYKF 201
>gi|224024322|ref|ZP_03642688.1| hypothetical protein BACCOPRO_01045 [Bacteroides coprophilus DSM
18228]
gi|224017544|gb|EEF75556.1| hypothetical protein BACCOPRO_01045 [Bacteroides coprophilus DSM
18228]
Length = 1012
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 2/122 (1%)
Query: 69 THPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ P +N T N N G+ + +G+N + D+ FG+ + K++ +
Sbjct: 715 SVPTEFALNPYTDNVGSMNNKGVELNIGYNDRWGDWTFGVAANFAYNKNEILDLGGADYL 774
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
+ G S+++ IY GF + + + + G
Sbjct: 775 DTGYNQRNAVGQSINAYYIYKTDGFFNSQEEADAFTAKYGNPFGAGGFKAGDLKYVDTNG 834
Query: 187 IG 188
G
Sbjct: 835 DG 836
>gi|212212358|ref|YP_002303294.1| OmpA-like transmembrane domain protein [Coxiella burnetii
CbuG_Q212]
gi|212010768|gb|ACJ18149.1| OmpA-like transmembrane domain protein [Coxiella burnetii
CbuG_Q212]
Length = 248
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 58/223 (26%), Gaps = 46/223 (20%)
Query: 55 SGNYVGLHISRL-----YETHPLADT----INRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
+G YV T + T N+ G + + F
Sbjct: 37 AGFYVRGEAGYGLVDKKSGTSKVNFTGVTLTENSHTNTKKSRGFNGRVAIGYAFNPY-FS 95
Query: 106 INCHTTAA-----KDDSTFYRLKEKYFIYGDVV-----------LKAGYSVDSLLIYGMG 149
+ T + L + + KA +D+ + G
Sbjct: 96 LESGFTYYHPAYRDVNIAGSALPLFSSVQAEGRQKINLYSIDLMGKATLPIDNFYAFIEG 155
Query: 150 GFGGAYVIDSSLEKVESDNS-------KNAKGRFDGHGSSVV---LGIGLDYMVNYDISL 199
G + ++ + + S + + + GIG+ Y + +I +
Sbjct: 156 GVAYVHTKFAAFTETGTAVSPLLPPVTSSVAVKVPSSSKGYIRPKAGIGVGYNITQNIGV 215
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SY + + + + N + +LG+ F
Sbjct: 216 DISYSRVF----------GQGKINNTNYLPNLNAVTLGLTYKF 248
>gi|186472063|ref|YP_001859405.1| membrane protein involved in aromatic hydrocarbon degradation
[Burkholderia phymatum STM815]
gi|184194395|gb|ACC72359.1| membrane protein involved in aromatic hydrocarbon degradation
[Burkholderia phymatum STM815]
Length = 394
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 56/192 (29%), Gaps = 20/192 (10%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAKDDS 117
G + Y L +SL + + + + G++ +
Sbjct: 123 FGTGVGTSYGRPALTVPGAGVAKSSLQTMIAAPTVTWRLTEHNIIGIGLSLAYQRFSANG 182
Query: 118 TFYRLKEKY----FIYGDVVL-----KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ +G + GY + +G + + S L E+D
Sbjct: 183 AIVPADDGTLQPLPSHGTANAFGYGIRVGYIWQPASTFTLGASYASRIRMSKLSGYENDL 242
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
GR D GIG+ Y V ++L+A + ++ + ++
Sbjct: 243 LAAGGGRID---IGAQYGIGVAYKVIPSVTLAADWLHMEFSNTIIGSAQGFGW------- 292
Query: 229 GNAHIASLGINM 240
+ +G++
Sbjct: 293 QDQDFFRIGVSW 304
>gi|325136713|gb|EGC59313.1| opacity protein [Neisseria meningitidis M0579]
Length = 232
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 28/125 (22%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------------------- 180
D Y +V + + +K
Sbjct: 121 FDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSVTKPGEIVETPTSKPAYHESHS 180
Query: 181 ---SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ + G+ + + ++L YRY + + H SLG
Sbjct: 181 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 227
Query: 238 INMHF 242
+ F
Sbjct: 228 MRYRF 232
>gi|156739544|gb|ABU93432.1| Omp25 [Brucella abortus]
Length = 49
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 18/59 (30%), Gaps = 11/59 (18%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
++ ++ Y G G+ + + N G GL+ + +I
Sbjct: 1 DLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 48
>gi|2315239|emb|CAA44824.1| Opa900 outer membrane protein [Neisseria meningitidis]
Length = 260
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 28/125 (22%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH-------------------- 179
D Y +V + + +K
Sbjct: 149 FDKFKPYIGARVAYGHVKHQVHSVRKETKTTFSKPGVGVTEPGKIVEGPTPKPPYHESNS 208
Query: 180 --GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ + G+ + + ++L YRY + + H SLG
Sbjct: 209 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLK-------------NTRFKTHEVSLG 255
Query: 238 INMHF 242
+ F
Sbjct: 256 MRYRF 260
>gi|294141882|ref|YP_003557860.1| outer membrane protein OmpW [Shewanella violacea DSS12]
gi|293328351|dbj|BAJ03082.1| outer membrane protein OmpW [Shewanella violacea DSS12]
Length = 214
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 5/107 (4%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + L Y GG D+ + + + +G+DY VN
Sbjct: 113 FGNAESKLRPYIGGGVNFTNFYDNEFTNDLNGALSDLSMSSS---WGLAAQVGVDYQVNK 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++AS Y N D ++ S+G F
Sbjct: 170 NWLVNASVWYAQISTDVKFNLADTPVTIETDIDPWVYMVSVG--YTF 214
>gi|254671058|emb|CBA07932.1| Opacity protein and related surface antigens [Neisseria
meningitidis alpha153]
Length = 226
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 172 SNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 218
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 219 SLGMRYHF 226
>gi|2150074|gb|AAC32710.1| opacity protein [Neisseria meningitidis]
gi|2150076|gb|AAC32711.1| opacity protein [Neisseria meningitidis]
Length = 240
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 186 SNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 232
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 233 SLGMRYHF 240
>gi|85375617|ref|YP_459679.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
gi|84788700|gb|ABC64882.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
Length = 367
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 22/206 (10%), Positives = 49/206 (23%), Gaps = 26/206 (12%)
Query: 57 NYVGLHISRL---YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
YV + + + + T +S G +G++ A
Sbjct: 19 WYVEVDGGAMIVEDIDLNVNTASDALTISSDEGFDFGGIVGYD--FGAARLEAEASYAEA 76
Query: 114 KDDSTF-------YRLKEKYFIYGDVVLKAGYSVDSLLIYG----------MGGFGGAYV 156
D + G S+ ++ G GG
Sbjct: 77 SIDDILVGTAGFPAGRAGRLAPAGTYEANGDISILRFMVNALADFGPDDGLQGFVGGGIG 136
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G + + G+ +N + + YR + +
Sbjct: 137 VARTALDTTINTNGAPGIDDSDSGFAWQVLAGVRAPLNDNWDVGLKYRLFNAESVELIDR 196
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ VD H + +F
Sbjct: 197 AGRI----VDNNVRTHSILGTLTYNF 218
>gi|322514402|ref|ZP_08067447.1| outer membrane protein P2 [Actinobacillus ureae ATCC 25976]
gi|322119696|gb|EFX91749.1| outer membrane protein P2 [Actinobacillus ureae ATCC 25976]
Length = 381
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 50/186 (26%), Gaps = 26/186 (13%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
GL I Y D + N L N G+ + QL F + + +
Sbjct: 179 GLQIGANYNFAEKRDVRGKVLVNELK-NAYGLGAVYETQLGGNTFNVQGGIGRSNYATGT 237
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ GY++ L + G G+ S K
Sbjct: 238 NHKHYQDGYQIA----LGYTIGDLKLVGDFGYEYEKENGSKRTK---------------- 277
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG---NAHIASL 236
+ + G Y V + +Y Y AK+D K H L
Sbjct: 278 --AFFVAPGFQYQVVPASRIYGNYLYERAEKTVAKAEVAKADSTTTVAKAEKEKTHGFLL 335
Query: 237 GINMHF 242
G++ F
Sbjct: 336 GVDYKF 341
>gi|296159574|ref|ZP_06842398.1| OmpW family protein [Burkholderia sp. Ch1-1]
gi|295890282|gb|EFG70076.1| OmpW family protein [Burkholderia sp. Ch1-1]
Length = 241
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 48/190 (25%), Gaps = 15/190 (7%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
P T + + +GI G+ + + V G S K
Sbjct: 52 GGSPTNITEANTGASLSSADTIGITAGYFVTDHIAAELVVGYPPSFDLEGSGSLAQFGKL 111
Query: 125 KYFIYGDVVLKAGYSVDS----LLIYGMGGFGGAYVIDSSLEKV--ESDNSKNAKGRFDG 178
L Y ++ Y G + D + E++
Sbjct: 112 GQAKQWSPTLLFKYYFNAPTAAFRPYLGVGVSRIWFTDEKITNSAFEANVLHGPTSVTTD 171
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI----- 233
V G Y N S Y+P + ++ A + V ++ + I
Sbjct: 172 SSWEPVFNAGFTYAFNQHWFAGFSVSYLPLSTTAKLSTAANTPVGTLNVQSQTKIKLNPI 231
Query: 234 -ASLGINMHF 242
+ I F
Sbjct: 232 VTYVNIGYRF 241
>gi|240124946|ref|ZP_04737832.1| outer membrane protein [Neisseria gonorrhoeae SK-92-679]
gi|268683527|ref|ZP_06150389.1| outer membrane protein [Neisseria gonorrhoeae SK-92-679]
gi|268623811|gb|EEZ56211.1| outer membrane protein [Neisseria gonorrhoeae SK-92-679]
Length = 234
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 26/84 (30%), Gaps = 13/84 (15%)
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
S+ + + + + G+ + + ++L A YRY
Sbjct: 164 STNYDISPKTQNAHQESNSIRRVGLGVIAGVGFDITPKLTLDAGYRYHNWGRLE------ 217
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 218 -------NTRFKTHEASLGMRYRF 234
>gi|170727546|ref|YP_001761572.1| outer membrane protein W [Shewanella woodyi ATCC 51908]
gi|169812893|gb|ACA87477.1| OmpW family protein [Shewanella woodyi ATCC 51908]
Length = 214
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 5/107 (4%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + L Y G D+ + + +G+DY VN
Sbjct: 113 FGSANSKLRPYIGAGVNFTNFFDNEFTNDLDGALTDLSLSNS---WGLAAQVGIDYQVNK 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++AS Y N + D ++ S+G F
Sbjct: 170 NWLVNASVWYAQIDTDVKFNLGDAPVTIQTDIDPWVYMVSVG--YTF 214
>gi|91226704|ref|ZP_01261393.1| outer membrane protein OmpW [Vibrio alginolyticus 12G01]
gi|91189001|gb|EAS75284.1| outer membrane protein OmpW [Vibrio alginolyticus 12G01]
Length = 214
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G Y G D + D + IG+DYM+N
Sbjct: 112 FGEPQSKFRPYVGAGLNYTMFFDEGFNSTGKGAGLSDLKLDDS--FGLAANIGVDYMIND 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+A+ Y + + + ++ D K N + + F
Sbjct: 170 QWFLNAAAWYANIETEATYKAGGE--KQKTDVKINPWVFMISGGYKF 214
>gi|2150098|gb|AAC32722.1| opacity protein [Neisseria meningitidis]
gi|2253238|gb|AAC32680.1| opacity protein Opa94 [Neisseria meningitidis]
Length = 245
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 29/124 (23%), Gaps = 34/124 (27%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------------------- 180
D Y +V + + +K
Sbjct: 135 FDKFKPYIGVRVAYGHVKHQVHSVRKETTTVFSKPSGSTTKPGEIPSLVTKPAYHESNSI 194
Query: 181 --SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 195 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 241
Query: 239 NMHF 242
HF
Sbjct: 242 RYHF 245
>gi|15606059|ref|NP_213436.1| hypothetical protein aq_627 [Aquifex aeolicus VF5]
gi|2983244|gb|AAC06840.1| putative protein [Aquifex aeolicus VF5]
Length = 308
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 7/155 (4%)
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
++LG +I+ D+ G + + +D + L +Y + L+AG++ I
Sbjct: 158 LKLGLDIRWIDW-SGADGYGDFDWEDQWVFGLGVEYKPMDSLALRAGWNYGKTPIRDKDN 216
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV---LGIGLDYMVNYDISLSASYRYIP 207
+S + + L +GL++ + + ++ SY Y
Sbjct: 217 LDPMTPKNSVPSFDTRFSDFQLYWFNLVGFPAFAEHHLTLGLNWKITPNFNIDLSYVYAL 276
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + V K H +G+N F
Sbjct: 277 PKTVTAKAAQGAGE---VSTKMVQHSIGVGLNWAF 308
>gi|325140956|gb|EGC63463.1| opacity protein [Neisseria meningitidis CU385]
gi|325199629|gb|ADY95084.1| opacity protein [Neisseria meningitidis H44/76]
Length = 224
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 28/124 (22%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V + +K + ++
Sbjct: 114 DKFKPYIGARVAYGHVKHQVHSVETKTTTITSKPKNGSPQGGPIIQTDPSKPPYHESHSI 173
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H SLG+
Sbjct: 174 SSVGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 220
Query: 239 NMHF 242
F
Sbjct: 221 RYRF 224
>gi|270260992|ref|ZP_06189265.1| outer membrane protein X [Serratia odorifera 4Rx13]
gi|270044476|gb|EFA17567.1| outer membrane protein X [Serratia odorifera 4Rx13]
Length = 172
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 51/179 (28%), Gaps = 29/179 (16%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
++ + + + G L + + ++ G+ T + D +
Sbjct: 22 AFAGQSTVSAGYAQGDFQGVANKADGFNLKYRYEFDNNPLGVIGSFTHLEKDGSQGGYYN 81
Query: 125 KYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K + Y + IYG+ G G ID++ + + S +
Sbjct: 82 KAQYN-SITAGPAYRFNDWASIYGVIGVGYGKNIDNAQNGNDRNGSSD---------YGF 131
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G GL + +++L Y + R + +G+ F
Sbjct: 132 TYGAGLQFNPIQEVALDVGYE------------------QSRIRSVDVGTWMVGVGYRF 172
>gi|126173728|ref|YP_001049877.1| outer membrane protein W [Shewanella baltica OS155]
gi|125996933|gb|ABN61008.1| OmpW family protein [Shewanella baltica OS155]
Length = 215
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 28/98 (28%), Gaps = 5/98 (5%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D+ + + G+DY VN + ++AS
Sbjct: 123 PYIGVGVNYTNFYDNEFTNDLGGALTDLSMT---TSWGLAAQAGVDYQVNKNWLVNASVW 179
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + V D ++ S+G F
Sbjct: 180 YAQISSDVKFKLSGDTVVIGTDIDPWVYMVSVG--YTF 215
>gi|2150086|gb|AAC32716.1| opacity protein [Neisseria meningitidis]
Length = 234
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 29/118 (24%)
Query: 141 DSLLIYGMGGFGGAYVID--------------SSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D Y +V ++ V + SSV LG
Sbjct: 130 DKFKPYIGVRVAYGHVKHQVHSVESKTTTVTTNNGGPVPQGPTPKPAYHESHSISSVGLG 189
Query: 187 --IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ + + ++L YRY + + H SLG+ HF
Sbjct: 190 VIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMRYHF 234
>gi|329894338|ref|ZP_08270208.1| Outer membrane protein W precursor [gamma proteobacterium IMCC3088]
gi|328923134|gb|EGG30457.1| Outer membrane protein W precursor [gamma proteobacterium IMCC3088]
Length = 230
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 28/105 (26%), Gaps = 7/105 (6%)
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-----GHGSSVVLGIGLDYMVNYDI 197
Y G + +D G + G+D +N
Sbjct: 128 WQPYLGLGLNYTAFFSEDPSQELADTLGALLGANRVGLQLEDSFGLAAQAGVDIPLNDQW 187
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S++ ++ + + D + + + ++GI F
Sbjct: 188 SVNFGVWWVDIDTTA--KVKTDVGTVKFDVELDPMVYNIGIAYRF 230
>gi|89073110|ref|ZP_01159649.1| hypothetical protein SKA34_01397 [Photobacterium sp. SKA34]
gi|89051063|gb|EAR56520.1| hypothetical protein SKA34_01397 [Photobacterium sp. SKA34]
Length = 336
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 45/152 (29%), Gaps = 18/152 (11%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG +VG + Y +D + + ++ G++ + FGI
Sbjct: 44 SGFWVGGALGMGY--VSNSDISKFPGSANGEAPSVKLDAGYDF---NQYFGIYGSYDYMH 98
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D + G++ L L +G G Y + + ++
Sbjct: 99 DLGNADMHLATLGVKGNLPL-----TQKLSAFGKLGATYIYADNKNFANNTLHMKSDSFS 153
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G+GL Y + + +S Y
Sbjct: 154 --------PTAGLGLSYQITHALSTQIGADYY 177
>gi|319763292|ref|YP_004127229.1| ompw family protein [Alicycliphilus denitrificans BC]
gi|330825487|ref|YP_004388790.1| OmpW family protein [Alicycliphilus denitrificans K601]
gi|317117853|gb|ADV00342.1| OmpW family protein [Alicycliphilus denitrificans BC]
gi|329310859|gb|AEB85274.1| OmpW family protein [Alicycliphilus denitrificans K601]
Length = 196
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 27/103 (26%), Gaps = 16/103 (15%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+ + Y G S + + L +G DY ++ + SL
Sbjct: 110 MGAFKPYVGAGVNYTRF--------SSVDIAGGALTVKKNSWGPALQVGFDYALDKNWSL 161
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ V S K + + LG+ F
Sbjct: 162 -------NFDVKKVYIDTTVSGGIG-KFKVDPVLVGLGVGYRF 196
>gi|89887386|gb|ABD78339.1| outer surface protein precursor [Wolbachia endosymbiont of
Kleidotoma sp.]
Length = 196
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 14/176 (7%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG- 130
+ + ++ + L + + +++D + + D+ +
Sbjct: 30 ITNATGKEKDSPLKASFVAGGGAFGYKMDDIRVDVEGLYSWLNKDADVVGGTVADNLTAI 89
Query: 131 DVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
++ Y + + Y G G AYV + +KV D + G G +
Sbjct: 90 SGLVNVYYDIAIEDMPITPYVGVGVGAAYVSNPLAKKVTDD-------KASGFGVAYQAK 142
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + N A D + + A G+ +F
Sbjct: 143 AGVSYDVTPEVKLYAGARY--FGSYGANFGKATKDDAGIKVLYSTVGAEAGVAFNF 196
>gi|2642251|gb|AAC45980.1| opacity protein [Neisseria meningitidis]
Length = 230
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 29/118 (24%)
Query: 141 DSLLIYGMGGFGGAYVID--------------SSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D Y +V ++ V + SSV LG
Sbjct: 126 DKFKPYIGVRVAYGHVKHQVHSVESKTTTVTTNNGGPVPQGPTPKPAYHESHSISSVGLG 185
Query: 187 --IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ + + ++L YRY + + H SLG+ HF
Sbjct: 186 VIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMRYHF 230
>gi|326423888|ref|NP_760661.2| hypothetical protein VV1_1779 [Vibrio vulnificus CMCP6]
gi|319999261|gb|AAO10188.2| hypothetical protein VV1_1779 [Vibrio vulnificus CMCP6]
Length = 209
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 53/195 (27%), Gaps = 20/195 (10%)
Query: 42 NNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-E 100
N E + + G G Y+GL + D ++ + G +G++ +
Sbjct: 19 NATETEQPQLGPKQGWYLGLD--AVKAEVSFNDVGSQSYDLDV---GAAFTVGYDKKFTN 73
Query: 101 DFVFGINCHTTAAKDDSTFYRLKEK--------YFIYGDVVL---KAGYSVDSLLIYGMG 149
+FV G L + + Y Y G
Sbjct: 74 NFVTGFEFEYAYFGSKKMGETLSNSNVGQVMTDIEVAFSAFGFNMRPKYYFGDSKFYLGG 133
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G A L ++ + + GS G+ + Y + L YR +
Sbjct: 134 LLGYASTKQEWLRTRDN---FQSATDKESSGSGFNYGVEVGYEFDSGWMLQGGYRGVATD 190
Query: 210 IHSVNNSNAKSDVER 224
VN + +
Sbjct: 191 FDDVNVDISALYIGG 205
>gi|329114380|ref|ZP_08243142.1| Outer membrane protein [Acetobacter pomorum DM001]
gi|326696456|gb|EGE48135.1| Outer membrane protein [Acetobacter pomorum DM001]
Length = 452
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 17/174 (9%), Positives = 37/174 (21%), Gaps = 24/174 (13%)
Query: 24 LAVDLYLPRKIDLFNEADN--NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTY 81
+ + R N + D W Y G I + + T
Sbjct: 165 FVTNTFNSRADGRRQTYGVMANALFDLDVGKPWLFPYFGAGIGYGWTAMRTSVTAPGNQL 224
Query: 82 NSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD 141
+ G + + + + + +
Sbjct: 225 AEKMGGTFG------------------NFAYQGIFGLAFPIPWVVGLSATAEYRFWTMLG 266
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVN 194
G + + ++ + + G D + L +GL Y N
Sbjct: 267 ---PQSHGATSWGTIGGTINSINQTHPYQFSSGHHDTKTDFNHTLMLGLRYEFN 317
Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 29/217 (13%), Positives = 56/217 (25%), Gaps = 31/217 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH-NIQLED-FVFGINCHTTAA 113
G Y+ + T + +G L + F + +
Sbjct: 101 GLYIAGEGGATFNQDQRVRTSAQFPDGRDRWRTGAAGIGSIGWGLGNGFRVEVEGDYRSM 160
Query: 114 K-----DDSTFYRLKEKYFIYGDVVLKAGYSVDS----LLIYGMGGFGGAYVIDSSLEKV 164
++ R + YG V+ A + +D L Y G G + +
Sbjct: 161 GYQRFVTNTFNSRADGRRQTYG-VMANALFDLDVGKPWLFPYFGAGIGYGWTAMRTSVTA 219
Query: 165 ESDNSKNA-KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ G F + G+ +S +A YR+ + + + +
Sbjct: 220 PGNQLAEKMGGTFGNFAYQGIFGLAFPIPWVVGLSATAEYRFWTMLGPQSHGATSWGTIG 279
Query: 224 RV-----------------DRKGNA-HIASLGINMHF 242
D K + H LG+ F
Sbjct: 280 GTINSINQTHPYQFSSGHHDTKTDFNHTLMLGLRYEF 316
>gi|296102013|ref|YP_003612159.1| outer membrane protein W [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295056472|gb|ADF61210.1| outer membrane protein W [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 210
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 57/200 (28%), Gaps = 19/200 (9%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAK 114
G Y H + + + T+ + + G + +N QL F + +
Sbjct: 17 GAY--AHEAGEFFIRAGSATVRPTEGSDNVLGMGGFNVSNNTQLGLTFTYMATDNIGVEL 74
Query: 115 DDSTFYRLKEKYFIYGDVVLK------------AGYSVDSLLIYGMGGFGGAYVIDSSLE 162
+T +R + GD+ G S L Y G D
Sbjct: 75 LAATPFRHRVGLGPTGDIATVHHLPPTLMAQWYFGDSSSKLRPYIGAGVNYTTFFDEKFN 134
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ D V +G+DY++N D ++AS Y+ + +
Sbjct: 135 DTGKEAGLTDLSLKDSW--GVAGQVGMDYLINRDWLINASVWYMDIDTDVRFKAGGQQQS 192
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ S G F
Sbjct: 193 ISTRLDPWVFMFSAG--YRF 210
>gi|2150088|gb|AAC32717.1| opacity protein [Neisseria meningitidis]
Length = 234
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 29/118 (24%)
Query: 141 DSLLIYGMGGFGGAYVID--------------SSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D Y +V ++ V + SSV LG
Sbjct: 130 DKFKPYIGVRVAYGHVKHQVHSVESKTTTVTTNNGGPVPQGPTPKPAYHESHSISSVGLG 189
Query: 187 --IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ + + ++L YRY + + H SLG+ HF
Sbjct: 190 VIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMRYHF 234
>gi|282877144|ref|ZP_06285985.1| hypothetical protein HMPREF0650_0456 [Prevotella buccalis ATCC
35310]
gi|281300742|gb|EFA93070.1| hypothetical protein HMPREF0650_0456 [Prevotella buccalis ATCC
35310]
Length = 177
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 48/149 (32%), Gaps = 8/149 (5%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ ++ + T G G+ L ++F F + + +++++F +
Sbjct: 26 FGSYAFGASGLYGTSGDYNHGGAGLTL-QKFFGDEFRFSMFANYFFKQNNASFIEFGTDF 84
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
+ K G + G+ + + + D + + LG
Sbjct: 85 NYVFPLTPKLG-----IYPVLGLGYSIMKLNNVIEKPAGVDILPDDYADDSEGNLNFDLG 139
Query: 187 IGLDYMVNYDISLSAS--YRYIPHHIHSV 213
G +Y A YRY+ ++ ++
Sbjct: 140 AGCEYYFTPSFKGFAEVKYRYVKNYDRTL 168
>gi|2150084|gb|AAC32715.1| opacity protein [Neisseria meningitidis]
gi|13591539|emb|CAC36358.1| opacity protein [Neisseria meningitidis]
Length = 234
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 29/118 (24%)
Query: 141 DSLLIYGMGGFGGAYVID--------------SSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D Y +V ++ V + SSV LG
Sbjct: 130 DKFKPYIGVRVAYGHVKHQVHSVESKTTTVTTNNGGPVPQGPTPKPAYHESHSISSVGLG 189
Query: 187 --IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ + + ++L YRY + + H SLG+ HF
Sbjct: 190 VIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMRYHF 234
>gi|332290214|ref|YP_004421066.1| long-chain fatty acid outer membrane transporter [Gallibacterium
anatis UMN179]
gi|330433110|gb|AEC18169.1| long-chain fatty acid outer membrane transporter [Gallibacterium
anatis UMN179]
Length = 453
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSN--AKSDVERVDRKGNAHIASLGINMHF 242
G Y ++S+ A Y ++ S + D K AH+ LG+N F
Sbjct: 396 FGATYRFTPNLSVDAGYAFVKGKNLSFEEYDQENPLVKGSFDSKSTAHLFGLGLNYRF 453
>gi|325136831|gb|EGC59429.1| opacity protein [Neisseria meningitidis M0579]
Length = 288
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 30/123 (24%), Gaps = 33/123 (26%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--------------------H 179
D Y +V S ++ N G +
Sbjct: 179 FDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIR 238
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 239 RLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 285
Query: 240 MHF 242
F
Sbjct: 286 YRF 288
>gi|225851452|ref|YP_002731686.1| membrane protein [Persephonella marina EX-H1]
gi|225645997|gb|ACO04183.1| membrane protein [Persephonella marina EX-H1]
Length = 415
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 28/64 (43%)
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
++ + +G Y ++ + SY Y+ +VN ++ ++ +AH+ ++ +
Sbjct: 352 DSNAWIFSLGGIYNLSERLEFGLSYLYVTKIDRNVNTPPNENGIDGKFSDLSAHLVNISV 411
Query: 239 NMHF 242
F
Sbjct: 412 GYKF 415
>gi|124267096|ref|YP_001021100.1| hypothetical protein Mpe_A1907 [Methylibium petroleiphilum PM1]
gi|124259871|gb|ABM94865.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 462
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 54/180 (30%), Gaps = 24/180 (13%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G + L+ P +T + +G I +Q +G D S
Sbjct: 272 GFGFAGLHGKSPNFNTGYNTMAHLFEVDGYFIRGDWTVQ-GQLSYGQQKEGAVTPDASGR 330
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLL-----------------IYGMGGFGGAYVIDSSLE 162
YR YG V AGY++ L +Y G+ +
Sbjct: 331 YR---DARWYG-VSGLAGYAITPRLQGLVRADYLKNEKNGGGLYTYNGYSFIDENGLLVY 386
Query: 163 KVESDNSKNA--KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ N G D + L +GL Y +N + +L A YR+ + +
Sbjct: 387 GNDGRNGIGPDLAGDLDRGANRYALTVGLKYALNQNTTLKAEYRFDGADRAVFEDVDGGG 446
>gi|160873391|ref|YP_001552707.1| OmpA domain-containing protein [Shewanella baltica OS195]
gi|160858913|gb|ABX47447.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS195]
Length = 186
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 54/198 (27%), Gaps = 33/198 (16%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
Q +G YVG + AD + + + G ++ FG+
Sbjct: 20 QVSAATDTTGFYVGGAL-----NRVTADAFDGSETGTGVGVYGGYN------FNEW-FGL 67
Query: 107 NCHTTAAKD--DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ A D D + D Y G V
Sbjct: 68 EANLFATGDLGDKDVDISAGALSFTPKFTAQIN---DIFSAYAKVGIASMAVNVDGYGY- 123
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
D G G+G++ V +++ SY + + + +S +
Sbjct: 124 ----------DEDFTGFGWTYGVGVNAAVTEHLNIRVSYD-----VTTGDLDADRSYLGL 168
Query: 225 VDRKGNAHIASLGINMHF 242
D + ++G++ F
Sbjct: 169 KDIDTDIKQFAVGVHYQF 186
>gi|2232362|gb|AAB62386.1| attachment and invasion protein homolog [Salmonella enterica subsp.
enterica serovar Typhimurium]
Length = 165
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 15/155 (9%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+G+ + Y+ L N G + +N + D FG T D
Sbjct: 17 IGVRNAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVN 76
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
Y K Y +++ Y + L Y M G ++ D+
Sbjct: 77 NYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNW--------------GNS 122
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ ++ G G+ +I+++ASY + +
Sbjct: 123 DNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDA 157
>gi|300312827|ref|YP_003776919.1| hypothetical protein Hsero_3532 [Herbaspirillum seropedicae SmR1]
gi|300075612|gb|ADJ65011.1| hypothetical protein Hsero_3532 [Herbaspirillum seropedicae SmR1]
Length = 309
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 52/189 (27%), Gaps = 11/189 (5%)
Query: 58 YVGLHISRL-YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA-AKD 115
YVG +S Y + + YN L + +
Sbjct: 127 YVGALMSGGNYGSVTASSGAVLTDYNLRLGKAFTLH-------PSLLLTPFADIGHHEWQ 179
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
++ YG ++ + +++ + +S + NA
Sbjct: 180 RGVNAGETYRHGSYGVGLMLQANVMSKMVVSATAILARTVDAHIDVANSDSAQASNAFST 239
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
G+ + +DY + + SA Y N + + + K ++ S
Sbjct: 240 SLGNSQLYKAALSIDYALTPALHASAGVDYYAFRYGRSANVRTANGLAYYEPKSDSRYVS 299
Query: 236 --LGINMHF 242
+G+ F
Sbjct: 300 FAVGVGYRF 308
>gi|332828137|gb|EGK00853.1| hypothetical protein HMPREF9455_02818 [Dysgonomonas gadei ATCC
BAA-286]
Length = 185
Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 46/151 (30%), Gaps = 17/151 (11%)
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY 138
+ +S GLG + +N+ + KD T + +
Sbjct: 40 GSGDSFTNYGLGAKFLYNVT-DPVRLAAEFDYFLKKDGITMWDASVYGHYLIPLT----- 93
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVES---------DNSKNAKGRFDGHGSSVVLGIGL 189
+ +Y G G S+ + + + + G LG G
Sbjct: 94 --EKFTLYPSAGLGLINTKASNGQAINESLGELGNILGIAVSEDGSTSSSDFVFSLGGGA 151
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+Y + +++L+ +RY +N + +
Sbjct: 152 EYELTDNLALNGEFRYKIKDGSRINIALGIA 182
>gi|254369500|ref|ZP_04985512.1| hypothetical protein FTAG_00492 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122450|gb|EDO66590.1| hypothetical protein FTAG_00492 [Francisella tularensis subsp.
holarctica FSC022]
Length = 375
Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 57 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 116
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 117 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 168
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 169 PSNISGANGRAGTNMIGAGLTWFF 192
>gi|121635277|ref|YP_975522.1| pseudogene (opacity protein) [Neisseria meningitidis FAM18]
gi|120866983|emb|CAM10746.1| pseudogene (opacity protein) [Neisseria meningitidis FAM18]
Length = 264
Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 28/125 (22%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH-------------------- 179
D Y +V + + +K
Sbjct: 153 FDKFKPYIGARVAYGHVKHQVHSVRKETKTTFSKPGVGVTEPGKIVEGPTPKPPYHESNS 212
Query: 180 --GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ + G+ + + ++L YRY + + H SLG
Sbjct: 213 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLK-------------NTRFKTHEVSLG 259
Query: 238 INMHF 242
+ F
Sbjct: 260 MRYRF 264
>gi|53720768|ref|YP_109754.1| putative outer membrane protein [Burkholderia pseudomallei K96243]
gi|53724288|ref|YP_104258.1| OmpW family outer membrane protein [Burkholderia mallei ATCC 23344]
gi|76808524|ref|YP_335084.1| OmpW family outer membrane protein [Burkholderia pseudomallei
1710b]
gi|121598577|ref|YP_994497.1| OmpW family outer membrane protein [Burkholderia mallei SAVP1]
gi|124384601|ref|YP_001027744.1| OmpW family outer membrane protein [Burkholderia mallei NCTC 10229]
gi|126440405|ref|YP_001060696.1| ompW family protein [Burkholderia pseudomallei 668]
gi|126450241|ref|YP_001082310.1| OmpW family outer membrane protein [Burkholderia mallei NCTC 10247]
gi|126453273|ref|YP_001067980.1| ompW family protein [Burkholderia pseudomallei 1106a]
gi|134283310|ref|ZP_01770011.1| outer membrane protein, OmpW family [Burkholderia pseudomallei 305]
gi|217424743|ref|ZP_03456240.1| outer membrane protein, OmpW family [Burkholderia pseudomallei 576]
gi|226198297|ref|ZP_03793868.1| outer membrane protein, OmpW family [Burkholderia pseudomallei
Pakistan 9]
gi|237814091|ref|YP_002898542.1| outer membrane protein, OmpW family [Burkholderia pseudomallei
MSHR346]
gi|242316707|ref|ZP_04815723.1| outer membrane protein, OmpW family [Burkholderia pseudomallei
1106b]
gi|251767783|ref|ZP_02268415.2| outer membrane protein, OmpW family [Burkholderia mallei PRL-20]
gi|254175064|ref|ZP_04881725.1| outer membrane protein, OmpW family [Burkholderia mallei ATCC
10399]
gi|254180394|ref|ZP_04886992.1| ompW family protein [Burkholderia pseudomallei 1655]
gi|254190356|ref|ZP_04896864.1| ompW family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254198516|ref|ZP_04904937.1| ompW family protein [Burkholderia pseudomallei S13]
gi|254201333|ref|ZP_04907697.1| outer membrane protein, OmpW family [Burkholderia mallei FMH]
gi|254206675|ref|ZP_04913026.1| outer membrane protein, OmpW family [Burkholderia mallei JHU]
gi|254260787|ref|ZP_04951841.1| ompW family protein [Burkholderia pseudomallei 1710a]
gi|254300629|ref|ZP_04968074.1| ompW family protein [Burkholderia pseudomallei 406e]
gi|254357299|ref|ZP_04973573.1| outer membrane protein, OmpW family [Burkholderia mallei
2002721280]
gi|52211182|emb|CAH37171.1| putative outer membrane protein [Burkholderia pseudomallei K96243]
gi|52427711|gb|AAU48304.1| outer membrane protein, OmpW family [Burkholderia mallei ATCC
23344]
gi|76577977|gb|ABA47452.1| outer membrane protein, OmpW family [Burkholderia pseudomallei
1710b]
gi|121227387|gb|ABM49905.1| outer membrane protein, OmpW family [Burkholderia mallei SAVP1]
gi|124292621|gb|ABN01890.1| outer membrane protein, OmpW family [Burkholderia mallei NCTC
10229]
gi|126219898|gb|ABN83404.1| ompW family protein [Burkholderia pseudomallei 668]
gi|126226915|gb|ABN90455.1| outer membrane protein, OmpW family [Burkholderia pseudomallei
1106a]
gi|126243111|gb|ABO06204.1| outer membrane protein, OmpW family [Burkholderia mallei NCTC
10247]
gi|134245505|gb|EBA45598.1| outer membrane protein, OmpW family [Burkholderia pseudomallei 305]
gi|147747227|gb|EDK54303.1| outer membrane protein, OmpW family [Burkholderia mallei FMH]
gi|147752217|gb|EDK59283.1| outer membrane protein, OmpW family [Burkholderia mallei JHU]
gi|148026363|gb|EDK84448.1| outer membrane protein, OmpW family [Burkholderia mallei
2002721280]
gi|157810616|gb|EDO87786.1| ompW family protein [Burkholderia pseudomallei 406e]
gi|157938032|gb|EDO93702.1| ompW family protein [Burkholderia pseudomallei Pasteur 52237]
gi|160696109|gb|EDP86079.1| outer membrane protein, OmpW family [Burkholderia mallei ATCC
10399]
gi|169655256|gb|EDS87949.1| ompW family protein [Burkholderia pseudomallei S13]
gi|184210933|gb|EDU07976.1| ompW family protein [Burkholderia pseudomallei 1655]
gi|217392199|gb|EEC32224.1| outer membrane protein, OmpW family [Burkholderia pseudomallei 576]
gi|225929817|gb|EEH25833.1| outer membrane protein, OmpW family [Burkholderia pseudomallei
Pakistan 9]
gi|237504516|gb|ACQ96834.1| outer membrane protein, OmpW family [Burkholderia pseudomallei
MSHR346]
gi|242139946|gb|EES26348.1| outer membrane protein, OmpW family [Burkholderia pseudomallei
1106b]
gi|243061726|gb|EES43912.1| outer membrane protein, OmpW family [Burkholderia mallei PRL-20]
gi|254219476|gb|EET08860.1| ompW family protein [Burkholderia pseudomallei 1710a]
Length = 243
Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 49/196 (25%), Gaps = 19/196 (9%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGINCHTTAAKDDST 118
++ H + +T + +G+ G+ + + V GI S
Sbjct: 52 NVGGSPVNHEVPNTGAGID----NADTIGLAAGYFLTDHIATELVAGIPPRFNLNGKGSL 107
Query: 119 FYRLKEKYFIYGDVVLKAGYSVD----SLLIYGMGGFGGAYVID--SSLEKVESDNSKNA 172
+ L Y + Y G + + E
Sbjct: 108 EQFGVLGHAYQWSPALLLKYYFNDAKAKFRPYVGIGASYIWFTGAKITNTAFERGALGGP 167
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ + VL G Y S YIP + + + + + V + A
Sbjct: 168 TSVQTSNQWAPVLNAGFTYNFTDHWFGGLSVSYIPVSLTATLTTQRPTPIGNVTQTSQAK 227
Query: 233 IAS------LGINMHF 242
I L I F
Sbjct: 228 ITLNPIVTYLNIGYRF 243
>gi|417402|sp|Q04885|OPA65_NEIGO RecName: Full=Opacity protein opA65; Flags: Precursor
gi|940802|emb|CAA79373.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 234
Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+ V ++L A YRY + + H A
Sbjct: 180 NRSSRRLGFGAMAGVGIDVAPGLTLDAGYRYHYWGRLE-------------NTRFKTHEA 226
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 227 SLGVRYRF 234
>gi|283478988|emb|CAY74904.1| Outer membrane protein X precursor [Erwinia pyrifoliae DSM 12163]
Length = 187
Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 42/180 (23%), Gaps = 28/180 (15%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
+ + Y + G L + + G T + D T
Sbjct: 36 AGSAMAQSTVTGGYAQSDYQGVANKANGFNLKYRYENGSDPLGWIGSFTYTEKDRTENGD 95
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
K YG A D IYG+ G G + + + +
Sbjct: 96 YIKGQYYGITGGPAYRLNDWASIYGVVGVGFGKFQAT----------GEDRFQSSSSDAG 145
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G GL + ++L Y R + + G+ F
Sbjct: 146 FSYGAGLQFNPMEHVALDVGYEQSRI------------------RSVDVGTWTAGVGYSF 187
>gi|2150054|gb|AAC32700.1| opacity protein [Neisseria meningitidis]
gi|13591541|emb|CAC36359.1| opacity protein [Neisseria meningitidis]
Length = 244
Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 30/123 (24%), Gaps = 33/123 (26%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--------------------H 179
D Y +V S ++ N G +
Sbjct: 135 FDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIR 194
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 195 RLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 241
Query: 240 MHF 242
F
Sbjct: 242 YRF 244
>gi|332186299|ref|ZP_08388044.1| hypothetical protein SUS17_1381 [Sphingomonas sp. S17]
gi|332013667|gb|EGI55727.1| hypothetical protein SUS17_1381 [Sphingomonas sp. S17]
Length = 232
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 17/220 (7%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYE-----THPLADTINRKTYNSLLPNGLGIEL 93
A + G Y+ + L + P + N G +E
Sbjct: 14 AAGTALSTPASAQTTIGGPYIVGRVGSLIDSDLKMKGPNMAPPSTFPANVDFRRGKSLEG 73
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-------DSLLIY 146
G L F TAA+ ++ L G + L +
Sbjct: 74 GLGYDLGGFRLEATVGYTAARANAKRLDSASLVSDGRSKTLSLGLAGYVDVPVEGPLRPF 133
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
GG V + + ++ D G G+ Y ++ ++ + RY
Sbjct: 134 VGGGIDVVRVTERLSRTTRAGGQGSSMNGRD-WGLRWHADAGVGYSLSDSTTVELAGRYA 192
Query: 207 PHHIHSVNN----SNAKSDVERVDRKGNAHIASLGINMHF 242
+N + K A ++G+ F
Sbjct: 193 QTTGLQFAARMPLANGGTVATSYKPKLTATSITVGLRQRF 232
>gi|293399201|ref|ZP_06643366.1| opacity protein opA67 [Neisseria gonorrhoeae F62]
gi|291610615|gb|EFF39725.1| opacity protein opA67 [Neisseria gonorrhoeae F62]
Length = 248
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 13/77 (16%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
S + + + G+ + + +++L A YRY
Sbjct: 185 STTPGAHQESNSIRRVGLGVIAGVGFDITPNLTLDAGYRYHNWGRLE------------- 231
Query: 226 DRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 232 NTRFKTHEASLGMRYRF 248
>gi|34101137|gb|AAQ57513.1| outer surface protein percursor [Wolbachia endosymbiont of
Pediculus humanus capitis]
Length = 196
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 14/176 (7%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG- 130
+ + ++ + L + + +++D + + D+ +
Sbjct: 30 IPNATGKEKDSPLKASFIAGGGAFGYKMDDIRVDVEGLYSWLNKDADVVGGTVADNLTAI 89
Query: 131 DVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
++ Y + + Y G G AYV + +KV D + G G +
Sbjct: 90 SGLVNVYYDIAIEDMPITPYVGVGVGAAYVSNPLAKKVTDD-------KASGFGVAYQAK 142
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + N A D + + A G+ +F
Sbjct: 143 AGVSYDVTPEVKLYAGARY--FGSYGANFGKATKDDAGIKVLYSTVGAEAGVAFNF 196
>gi|187938355|gb|ACD38215.1| outer membrane protein [Aeromonas hydrophila]
Length = 197
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 29/92 (31%), Gaps = 5/92 (5%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G V ++ + + + + +GLD +N ++ S +
Sbjct: 111 YVGIGVNYTTFFDEQGRGPLSNADVSLDNSWGMAGQVGLDMAINDRWFVNGSAWIMDIDT 170
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N + + K + + +G+ F
Sbjct: 171 DVHVNGG-----DGIKTKIDPMVFMVGVGYRF 197
>gi|30349724|gb|AAP22174.1| outer membrane protein X [Enterobacter aerogenes]
Length = 171
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 43/139 (30%), Gaps = 10/139 (7%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
T + + G L + + ++ G+ T + D+T
Sbjct: 22 AFAATSTVTGGYAQSDMQGKANKAGGFNLKYRYEQDNNPLGVIGSFTYTEKDNTSNGTYN 81
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K YG A D IYG+ G G +++ +S D
Sbjct: 82 KGQYYGITAGPAYRLNDWASIYGVIGVGYGKFQNNNFPNHKS----------DMSDYGFS 131
Query: 185 LGIGLDYMVNYDISLSASY 203
G G+ + +++L SY
Sbjct: 132 YGAGMQFNPIENVALDFSY 150
>gi|325201704|gb|ADY97158.1| opacity protein [Neisseria meningitidis M01-240149]
gi|325208409|gb|ADZ03861.1| opacity protein [Neisseria meningitidis NZ-05/33]
gi|325208560|gb|ADZ04012.1| opacity protein [Neisseria meningitidis NZ-05/33]
Length = 232
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 28/125 (22%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------------------- 180
D Y +V + + +K
Sbjct: 121 FDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSVTKPGEIVETPTSKPAYHESHS 180
Query: 181 ---SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ + G+ + + ++L YRY + + H SLG
Sbjct: 181 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 227
Query: 238 INMHF 242
+ F
Sbjct: 228 MRYRF 232
>gi|316984607|gb|EFV63572.1| opacity protein opA54 [Neisseria meningitidis H44/76]
gi|325140594|gb|EGC63114.1| opacity protein [Neisseria meningitidis CU385]
gi|325199922|gb|ADY95377.1| opacity protein [Neisseria meningitidis H44/76]
Length = 230
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 176 SNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 222
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 223 SLGMRYHF 230
>gi|307720444|ref|YP_003891584.1| hypothetical protein Saut_0523 [Sulfurimonas autotrophica DSM
16294]
gi|306978537|gb|ADN08572.1| conserved hypothetical protein [Sulfurimonas autotrophica DSM
16294]
Length = 423
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 18/198 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC-HTTAAKD 115
Y ++ + + + S L + Q +F G T A
Sbjct: 110 FYTSHDLNFASGDNTYHNNELSSSDGSYT-QTAEAYLNYKYQDFNFRAGRQVLDTPLADS 168
Query: 116 DS------------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
D Y F+ G++ GY + G G +
Sbjct: 169 DDIRMISNSFEAYVATYNYNGFEFMAGNIQSWQGYDAGLDTPWEKTGKNGTNFGGVAYNN 228
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
V N ++ G++Y +N DI + A +Y+ + + S +S +
Sbjct: 229 VWELNL--WYYNITDVVNAFYFDGGIEYNINKDILIHAMVQYLD--ENELALSGYESTIY 284
Query: 224 RVDRKGNAHIASLGINMH 241
+ +H S+GI +
Sbjct: 285 GAMAEFVSHGVSVGIAYN 302
>gi|85708815|ref|ZP_01039881.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
gi|85690349|gb|EAQ30352.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
Length = 378
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 49/189 (25%), Gaps = 30/189 (15%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
+N N+ L +G++ + F + T D + + G
Sbjct: 49 GTPPLNESFVNTGTGIELEAVVGYDFGM----FRLEAEATYKAQDHDTFVVTSPNNTLGV 104
Query: 132 VVL-KAGYSV-----------------DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ G D L + +GG G +++ SD
Sbjct: 105 PGGFRTGPDSTQDTLTAMLNGMIDIGDDDGLQFFVGGGAGF----ANVSFQLSDPVNGVF 160
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ G Y + ++ L YRY V ++ +H
Sbjct: 161 ADDSDTTFAYQGIAGARYPIADNVDLGVKYRYFRADNVEVEGFGGN----GLELFQESHS 216
Query: 234 ASLGINMHF 242
+ +F
Sbjct: 217 ILGTLTFNF 225
>gi|254227536|ref|ZP_04920968.1| outer membrane protein W [Vibrio sp. Ex25]
gi|262396201|ref|YP_003288054.1| outer membrane protein W precursor [Vibrio sp. Ex25]
gi|151940148|gb|EDN58974.1| outer membrane protein W [Vibrio sp. Ex25]
gi|262339795|gb|ACY53589.1| outer membrane protein W precursor [Vibrio sp. Ex25]
Length = 214
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G Y G D + D + IG+DYM+N
Sbjct: 112 FGEPQSKFRPYVGAGLNYTMFFDEGFNSTGKGAGLSDLKLDDS--FGLAANIGVDYMIND 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+A+ Y + + ++ D K N + + F
Sbjct: 170 QWFLNAAAWYANIETEATYKAGG--AKQKTDVKINPWVFMISGGYKF 214
>gi|325128857|gb|EGC51716.1| opacity protein [Neisseria meningitidis N1568]
Length = 180
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 31/122 (25%), Gaps = 33/122 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDS-------------SLEKVESDNSKNAKGRFDG-------HG 180
D Y +V S + + N K +
Sbjct: 72 DKFKPYIGARVAYGHVRHSIDSTKKTTEVLTSTHTPSTAPTIYNGKSTQNAYHESHSIRR 131
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 132 LGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMRY 178
Query: 241 HF 242
HF
Sbjct: 179 HF 180
>gi|262278715|ref|ZP_06056500.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262259066|gb|EEY77799.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 428
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G ++ + + K + + +G+G Y + D L A Y ++
Sbjct: 253 VGRLNHKFANGSMLSGRSFVAEKRTNNDEEVAWGVGLGGKYQITPDTLLKADYYHVKGDG 312
Query: 211 HSVNNSNAKSDVERVDR--KGNAHIASLGINMHF 242
+ SN+ ++ + SLGI F
Sbjct: 313 RFLLWSNSGYVIDDQNNMHSNEFDTVSLGITHQF 346
>gi|167621709|ref|YP_001672217.1| OmpW family protein [Caulobacter sp. K31]
gi|167351832|gb|ABZ74558.1| OmpW family protein [Caulobacter sp. K31]
Length = 227
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 13/146 (8%)
Query: 100 EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFGGAYV 156
+ G+ S YG ++L A Y ++ + Y G G
Sbjct: 92 GNLFLGVPATAQIDGAGSLEPLGTLAKVNYGPIILSAQYHFNNLGKVHPYLGVGVG---- 147
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ E D + D + +G+ Y + + L+A RY+P H+ +
Sbjct: 148 --RIVFLNERDRALLNFSIDDSW--APAAQVGVRYELGAEWMLNADVRYVPFSTHATGSL 203
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
R+D S G+ F
Sbjct: 204 GGAPVRTRLDIDPILT--SAGVTYRF 227
>gi|89887424|gb|ABD78358.1| outer surface protein precursor [Wolbachia endosymbiont of
Trichopria nigra]
Length = 197
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 14/176 (7%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG- 130
+ + ++ + L + + +++D + + D+ +
Sbjct: 31 IPNATGKEKDSPLKASFIAGGGAFGYKMDDIRVDVEGLYSWLNKDADVVGGTVADNLTAI 90
Query: 131 DVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
++ Y + + Y G G AYV + +KV D + G G +
Sbjct: 91 SGLVNVYYDIAIEDMPITPYVGVGVGAAYVSNPLAKKVTDD-------KASGFGVAYQAK 143
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + N A D + + A G+ +F
Sbjct: 144 AGVSYDVTPEVKLYAGARY--FGSYGANFGKATKDDAGIKVLYSTVGAEAGVAFNF 197
>gi|2150100|gb|AAC32723.1| opacity protein [Neisseria meningitidis]
Length = 244
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 190 SHSTSSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 236
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 237 SLGMRYHF 244
>gi|293397905|ref|ZP_06642111.1| conserved hypothetical protein [Neisseria gonorrhoeae F62]
gi|291611851|gb|EFF40920.1| conserved hypothetical protein [Neisseria gonorrhoeae F62]
Length = 81
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 25/91 (27%), Gaps = 13/91 (14%)
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + + + G+ + + +++L A YRY
Sbjct: 4 AAGQDGGAPTVYNNGSTQDAHQESDSIRRVGLGVIAGVGFDITPNLTLDAGYRYHNWGRL 63
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 64 E-------------NTRFKTHEASLGMRYRF 81
>gi|2150068|gb|AAC32707.1| opacity protein [Neisseria meningitidis]
Length = 243
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H A
Sbjct: 189 SNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEA 235
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 236 SLGVRYRF 243
>gi|2642253|gb|AAC45981.1| opacity protein [Neisseria meningitidis]
gi|2642255|gb|AAC45982.1| opacity protein [Neisseria meningitidis]
Length = 241
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 187 SHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 233
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 234 SLGVRYRF 241
>gi|308048817|ref|YP_003912383.1| OmpA domain protein transmembrane region-containing protein
[Ferrimonas balearica DSM 9799]
gi|307631007|gb|ADN75309.1| OmpA domain protein transmembrane region-containing protein
[Ferrimonas balearica DSM 9799]
Length = 177
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 43/157 (27%), Gaps = 16/157 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG I AD + + + ++ Q VF +
Sbjct: 26 GFYVGAAIGGASIQQDNADFED-IDFPEFDESDFAWKIFAGYQFNP-VFAVEG--GYRDL 81
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + DV G + L +G G + SD+ +
Sbjct: 82 GAPTAGNAKVDPYGIDVFAVGGIPLGPLRGFGKLGGIYWDSDTKYEGQKSSDDGFD---- 137
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
G+GL++ + ++ Y+ +
Sbjct: 138 -------FAAGLGLEFEL-GSFAIRGEIEYLDILDET 166
>gi|126663287|ref|ZP_01734285.1| hypothetical protein FBBAL38_08035 [Flavobacteria bacterium BAL38]
gi|126624945|gb|EAZ95635.1| hypothetical protein FBBAL38_08035 [Flavobacteria bacterium BAL38]
Length = 204
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 44/153 (28%), Gaps = 7/153 (4%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGL-GIELGHNIQLEDFVFGINCHTTAAKDDST 118
G+ I + + + +L P + G+ +N G+ D
Sbjct: 32 GITIGTNFYNIANNNKADSFIPENLAPALVLGVYGEYNFTKNT---GVKLDVLYYSKDFL 88
Query: 119 FYRLKEKYFI-YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
F + + + D+ Y Y G + S + SDN ++ K F+
Sbjct: 89 FDIKNTLFKMHFIDLSANFKYDFGET--YREGFYLIGGPKISIITDATSDNEEDYKHHFE 146
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
LG G DI Y P
Sbjct: 147 TLNLGAQLGFGWRVHKYIDIQTKLEYEITPFFK 179
>gi|293398731|ref|ZP_06642907.1| conserved hypothetical protein [Neisseria gonorrhoeae F62]
gi|291610871|gb|EFF39970.1| conserved hypothetical protein [Neisseria gonorrhoeae F62]
Length = 87
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 25/91 (27%), Gaps = 13/91 (14%)
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + + + G+ + + +++L A YRY
Sbjct: 10 AAGQDGGAPTVYNNGSTQDAHQESDSIRRVGLGVIAGVGFDITPNLTLDAGYRYHNWGRL 69
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 70 E-------------NTRFKTHEASLGMRYRF 87
>gi|254475426|ref|ZP_05088812.1| outer membrane protein, putative [Ruegeria sp. R11]
gi|214029669|gb|EEB70504.1| outer membrane protein, putative [Ruegeria sp. R11]
Length = 167
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 39/167 (23%), Gaps = 28/167 (16%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLG--IELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
+ + + G L ++ V G +
Sbjct: 27 GDWGRFIIGGAQAPAGQQQGIGATPGQSFHLEYDHDFGRLVIGGDLAVDGG-------PG 79
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
++ L+AGY + L Y G +G
Sbjct: 80 SSVEDTVPELRLRAGYDLGDTLGYVTVG-------------------TETQGEPGEREER 120
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
V+G+GL Y +N + LS Y + + +
Sbjct: 121 AVVGVGLTYSLNRALRLSGEYLHETDRSARPDTAGGDRISLTASFSF 167
>gi|13591545|emb|CAC36361.1| opacity protein [Neisseria meningitidis]
Length = 241
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + + ++L YRY
Sbjct: 169 GGTPTIYNQGSTQDAYHESHSIRRLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE---- 224
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ F
Sbjct: 225 ---------NTRFKTHEVSLGVRYRF 241
>gi|2150066|gb|AAC32706.1| opacity protein [Neisseria meningitidis]
Length = 243
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H A
Sbjct: 189 SNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEA 235
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 236 SLGVRYRF 243
>gi|325144898|gb|EGC67185.1| opacity protein [Neisseria meningitidis M01-240013]
Length = 230
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 176 SHSTSSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 222
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 223 SLGMRYHF 230
>gi|308049357|ref|YP_003912923.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307631547|gb|ADN75849.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 354
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 53/208 (25%), Gaps = 38/208 (18%)
Query: 42 NNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
+ E DD Y Y+G + + + + L G G +LG+ +
Sbjct: 43 VSAEAGDDTYAD--HLYLGAKAGWSHYHNGCESGASDCDKDDL---GWGAQLGYQF-SPN 96
Query: 102 FVFGIN------CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
+ + T + + + + ++G G
Sbjct: 97 WAAELEYLDFGQAEATYPFTYPHGTYTGSQRGWALSARASLPVT-EQVELFGKLGALYWQ 155
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSVN 214
D G + V +GL Y + L+ + +Y +
Sbjct: 156 GKVEGPTPTRKDE-----------GWAPVAEVGLGYRFSQRWQLNLATQYGDGVGSDELG 204
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
SN ++G+ F
Sbjct: 205 GSNLWLT-------------TIGVQYRF 219
>gi|301631693|ref|XP_002944932.1| PREDICTED: hypothetical protein LOC100493800, partial [Xenopus
(Silurana) tropicalis]
Length = 921
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 49/171 (28%), Gaps = 12/171 (7%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G H+ T+ N Y PN G+ G + + + A +
Sbjct: 448 GRYIGAHVGDADNTNNTFKVSNSVKY--TSPNFAGLSFGATYGFSNQGTASDGSSGFANN 505
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ + + G G GA V+D + + A
Sbjct: 506 RLMSTGAAYDHGPFAVGIGFLQADRPGAQPAGAVGSSGAGVLDDYANTFSTSIASAAGVE 565
Query: 176 FDGHGSSVVLGIGLDYMVNYDISL-----SASYRYIPHHIHSVNNSNAKSD 221
S G Y + +++ YRY+ +++N A
Sbjct: 566 RQRISLS-----GASYKLADALTVGGIYSKTQYRYLDATALTLDNYEANLT 611
>gi|156935083|ref|YP_001438999.1| hypothetical protein ESA_02934 [Cronobacter sakazakii ATCC BAA-894]
gi|156533337|gb|ABU78163.1| hypothetical protein ESA_02934 [Cronobacter sakazakii ATCC BAA-894]
Length = 925
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 48/151 (31%), Gaps = 8/151 (5%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYRLKEKYFI-- 128
+++ S G G++LG++ Q + D Y+L +
Sbjct: 764 MSNGQAVSGDASSDAWGFGLKLGYDWQFNTQGYLTPYASISGLFQDGDGYQLSNDMRVNS 823
Query: 129 --YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH---GSSV 183
Y + + G + YG Y + + S N + G + GS+V
Sbjct: 824 QSYDSLRYELGADLGYTFNYGNDQSFTPYAKLAYVYDDASGNDADVNGDNIDNGMEGSAV 883
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
G+G + + S A Y+ +
Sbjct: 884 RAGLGGKFSFTKNFSAYADANYLGGGDVDQD 914
>gi|293414528|ref|ZP_06657177.1| outer membrane protein [Escherichia coli B185]
gi|291434586|gb|EFF07559.1| outer membrane protein [Escherichia coli B185]
Length = 224
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 122 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 179
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + N + V + S G F
Sbjct: 180 DWLVNMSVWYMDIDTTASYKFNGTPVKDAVRLDPWVFMFSAG--YRF 224
>gi|189220274|ref|YP_001940914.1| Opacity protein or related surface antigen [Methylacidiphilum
infernorum V4]
gi|189187132|gb|ACD84317.1| Opacity protein or related surface antigen [Methylacidiphilum
infernorum V4]
Length = 254
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 40/169 (23%), Gaps = 17/169 (10%)
Query: 57 NYVGLHISRLY--ETHPLADTINRKTYNSLLPNGLGIELGHNIQLED----FVFGINCHT 110
Y+ + + T N+ LG+ G++ + +
Sbjct: 75 WYIAGGAGTAFVGANDGFVNPGGPITVNTNFSTVLGVLGGYHWLDTETHLAWTVEAEGAY 134
Query: 111 TAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + I V GY + + Y G G V
Sbjct: 135 IGTGHYLSLPNMNTALNIGALMVNGTVGYHIGNFEPYVGFGVGAVVVNAEVASANIG--- 191
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+ G+ Y + +A + +I S N A
Sbjct: 192 -------TNWAFAFQPIAGVRYFITAHWLAAAQFEWIWTDTLSGYNIGA 233
>gi|168243829|ref|ZP_02668761.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194450849|ref|YP_002045047.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194409153|gb|ACF69372.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205337212|gb|EDZ23976.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 174
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 28/185 (15%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+G+ + Y+ L N G + +N + D FG T D
Sbjct: 17 IGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVN 76
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
Y K Y +++ Y + L Y M G ++ D+
Sbjct: 77 NYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNW--------------GNS 122
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ ++ G G+ +I+++ASY + D A LG
Sbjct: 123 DNKTAFAYGAGIQLNPVENIAVNASYEHTSFST-------------DADSDVKAGTWVLG 169
Query: 238 INMHF 242
+ F
Sbjct: 170 VGYSF 174
>gi|325140183|gb|EGC62710.1| opacity protein [Neisseria meningitidis CU385]
Length = 224
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 26/124 (20%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V +K ++
Sbjct: 114 DKFKPYIGARVAYGHVKHQVHSVETKTTIVTSKPTQGAAQGGPIIQTDPSKPPYHESHSI 173
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H SLG+
Sbjct: 174 SSVGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 220
Query: 239 NMHF 242
F
Sbjct: 221 RYRF 224
>gi|163854455|ref|YP_001628753.1| outer membrane protein precursor [Bordetella petrii DSM 12804]
gi|163258183|emb|CAP40482.1| outer membrane protein precursor [Bordetella petrii]
Length = 208
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G + + ++ + + G + +G+D ++ L+A RYI
Sbjct: 122 YVGVGLNYTHFFDTQTRGALSGSDLKLGDSWGLAGQVGVDVKLDDRWFLNADLRYIDISS 181
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + +A++ + F
Sbjct: 182 KVKLDGQRIGTA-----RIDPWVATVAVGYRF 208
>gi|151567739|pdb|2JMM|A Chain A, Nmr Solution Structure Of A Minimal Transmembrane Beta-
Barrel Platform Protein
Length = 156
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 49/182 (26%), Gaps = 43/182 (23%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
T + Y+ G G G+ Q+ +V G + +
Sbjct: 5 NTWYTGAKLGWSQYSRENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMPRKAQGVQ--- 58
Query: 128 IYGDVVLKAGYS---VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
+ K GY D L IY G SD N S V
Sbjct: 59 ----LTAKLGYPKLGTDDLDIYTRLG-------GMVWRADTSDKDGNGYISAAEASVSPV 107
Query: 185 LGIGLDY----MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
G++Y + +I+ Y++ + + + SLG++
Sbjct: 108 FAGGVEYVIRRRITPEIATRLEYQWTNNAS-------------------DNGMLSLGVSY 148
Query: 241 HF 242
F
Sbjct: 149 RF 150
>gi|34101135|gb|AAQ57512.1| outer surface protein percursor [Wolbachia endosymbiont of
Pediculus humanus capitis]
gi|34101143|gb|AAQ57516.1| outer surface protein percursor [Wolbachia endosymbiont of
Pectinopygus falloroni]
gi|34101149|gb|AAQ57519.1| outer surface protein percursor [Wolbachia endosymbiont of Polyplax
serrata]
gi|34329803|gb|AAQ63996.1| outer surface protein [Wolbachia endosymbiont of Linognathus
vituli]
gi|34329813|gb|AAQ64001.1| outer surface protein [Wolbachia endosymbiont of Linognathus
setosus]
Length = 196
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 14/176 (7%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG- 130
+ + ++ + L + + +++D + + D+ +
Sbjct: 30 ITNATGKEKDSPLKASFIAGGGAFGYKMDDIRVDVEGLYSWLNKDADVVGGTVADNLTAI 89
Query: 131 DVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
++ Y + + Y G G AYV + +KV D + G G +
Sbjct: 90 SGLVNVYYDIAIEDMPITPYVGVGVGAAYVSNPLAKKVTDD-------KASGFGVAYQAK 142
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + N A D + + A G+ +F
Sbjct: 143 AGVSYDVTPEVKLYAGARY--FGSYGANFGKATKDDAGIKVLYSTVGAEAGVAFNF 196
>gi|2642273|gb|AAC45991.1| opacity protein [Neisseria meningitidis]
Length = 237
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + + ++L YRY
Sbjct: 165 GGTPTIYNQGSTQDAYHESHSIRRLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE---- 220
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ F
Sbjct: 221 ---------NTRFKTHEVSLGVRYRF 237
>gi|2150058|gb|AAC32702.1| opacity protein [Neisseria meningitidis]
Length = 241
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + + ++L YRY
Sbjct: 169 GGTPTIYNQGSTQDAYHESHSIRRLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE---- 224
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ F
Sbjct: 225 ---------NTRFKTHEVSLGVRYRF 241
>gi|2150060|gb|AAC32703.1| opacity protein [Neisseria meningitidis]
Length = 241
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + + ++L YRY
Sbjct: 169 GGTPTIYNQGSTQDAYHESHSIRRLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE---- 224
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ F
Sbjct: 225 ---------NTRFKTHEVSLGVRYRF 241
>gi|2150056|gb|AAC32701.1| opacity protein [Neisseria meningitidis]
gi|2150062|gb|AAC32704.1| opacity protein [Neisseria meningitidis]
gi|2150064|gb|AAC32705.1| opacity protein [Neisseria meningitidis]
Length = 241
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + + ++L YRY
Sbjct: 169 GGTPTIYNQGSTQDAYHESHSIRRLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE---- 224
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ F
Sbjct: 225 ---------NTRFKTHEVSLGVRYRF 241
>gi|417409|sp|Q04878|OPAE_NEIGO RecName: Full=Opacity protein opA55; Flags: Precursor
gi|940795|emb|CAA79366.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 234
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 32/121 (26%), Gaps = 32/121 (26%)
Query: 141 DSLLIYGMGGFGGAYVIDS-SLEKVESDNSKNAKGRFDGH------------------GS 181
D Y +V S K + ++ G +
Sbjct: 127 DKFKPYIGARVAYGHVRHSIDSTKKTTKFLTSSYGGLNPTVYTEENTQNAHHQSNSIRRV 186
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + G+ + + ++L YRY + + H ASLG+
Sbjct: 187 GLGVIAGVGFDITPKLTLDTGYRYHYWGRLE-------------NTRFKTHEASLGVRYR 233
Query: 242 F 242
F
Sbjct: 234 F 234
>gi|304391725|ref|ZP_07373667.1| OmpA family protein [Ahrensia sp. R2A130]
gi|303295954|gb|EFL90312.1| OmpA family protein [Ahrensia sp. R2A130]
Length = 250
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 71/245 (28%), Gaps = 16/245 (6%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L + S++ +L+ DL + A + + G + +
Sbjct: 11 LAALFTSSMLFTGSALSADLPESDPVPEAPPAVVSDGVGNFYIAGRGGISLLDDTAFNVG 70
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHN------IQLEDFVFGINCHTTAAKDDSTFYRL 122
+A N L LG + G+N +F + A + F
Sbjct: 71 GLGIASVSNEYDTGYLGVIALGYKYGNNLRAEVEYSYSNFDVDTHTAFDGAGGVTPFTSG 130
Query: 123 KEKYFIYGDVVLKAGY---SVDSLLIYGMGGFGGAYVIDSSL--EKVESDNSKNAKGRFD 177
+ G V+ +GY + + G G V +
Sbjct: 131 QSFGDATGQTVMVSGYYDFDLGRFKPFLGAGIGYGRVEADGYGVTPLAGALPGGVALNDS 190
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G + GL + V ++ YRY S++ + + D + H A +G
Sbjct: 191 DSGFAYQATAGLAFEVIDGVTAEVGYRY-----QSIDANLSSVTGAGNDFDFDTHNAFVG 245
Query: 238 INMHF 242
+ + F
Sbjct: 246 LRVGF 250
>gi|218532283|ref|YP_002423099.1| TonB-dependent siderophore receptor [Methylobacterium
chloromethanicum CM4]
gi|218524586|gb|ACK85171.1| TonB-dependent siderophore receptor [Methylobacterium
chloromethanicum CM4]
Length = 756
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 13/130 (10%)
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ ++ F K G + AGY+ D I GG+ + + D +
Sbjct: 595 SSTEAGFSAGPGKTNTRGAEIGIAGYATDWWQI--SGGYAYTEPRIVADIDDDGDVIRAG 652
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
++ L + + S+ Y Y S +N+ R D
Sbjct: 653 NLVGGVPLNTFSLWN--KFDIGERFSVGVGYLYQDASFASSDNAVRLPSFSRFD------ 704
Query: 233 IASLGINMHF 242
G+ F
Sbjct: 705 ---AGVFYAF 711
>gi|163853424|ref|YP_001641467.1| TonB-dependent siderophore receptor [Methylobacterium extorquens
PA1]
gi|163665029|gb|ABY32396.1| TonB-dependent siderophore receptor [Methylobacterium extorquens
PA1]
Length = 755
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 13/130 (10%)
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ ++ F K G + AGY+ D I GG+ + + D +
Sbjct: 595 SSTEAGFSAGPGKTNTRGAEIGIAGYATDWWQI--SGGYAYTEPRIVADIDDDGDVIRAG 652
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
++ L + + S+ Y Y S +N+ R D
Sbjct: 653 NLVGGVPLNTFSLWN--KFDIGERFSVGVGYLYQDASFASSDNAVRLPSFSRFD------ 704
Query: 233 IASLGINMHF 242
G+ F
Sbjct: 705 ---AGVFYAF 711
>gi|60752225|gb|AAX36073.1| OmpW [Vibrio alginolyticus]
Length = 213
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S Y G D + D + IG+DYM+N
Sbjct: 111 FGESQSKFRPYVGAGLNYTIFFDEDFNSTGKGADLSDLKLDDS--FGLAANIGVDYMIND 168
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+A+ Y + + ++ D K N + + F
Sbjct: 169 QWFLNAAAWYANIETEATYKAGGV--KQKTDVKINPWVFMISGGYKF 213
>gi|325198159|gb|ADY93615.1| opacity protein [Neisseria meningitidis G2136]
Length = 230
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 176 SHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLK-------------NTRFKTHEV 222
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 223 SLGMRYRF 230
>gi|1841506|gb|AAC46101.1| opacity outermembrane protein [Neisseria meningitidis]
Length = 256
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 27/124 (21%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V + +K ++
Sbjct: 146 DKFKPYIGARVAYGHVKHQVHSVETKTTTVTSKPTATSPQGGPIIQTDPSKPPYHESHSI 205
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H SLG+
Sbjct: 206 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 252
Query: 239 NMHF 242
F
Sbjct: 253 RYRF 256
>gi|316985322|gb|EFV64271.1| opacity protein opA54 [Neisseria meningitidis H44/76]
gi|325200388|gb|ADY95843.1| opacity protein [Neisseria meningitidis H44/76]
Length = 224
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 26/124 (20%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V +K ++
Sbjct: 114 DKFKPYIGARVAYGHVKHQVHSVETKTTIVTSKPTQGAAQGGPIIQTDPSKPPYHESHSI 173
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H SLG+
Sbjct: 174 SSVGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 220
Query: 239 NMHF 242
F
Sbjct: 221 RYRF 224
>gi|164685961|ref|ZP_01947630.2| ompA-like transmembrane domain protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212218674|ref|YP_002305461.1| OmpA-like transmembrane domain protein [Coxiella burnetii
CbuK_Q154]
gi|164601483|gb|EAX31749.2| ompA-like transmembrane domain protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212012936|gb|ACJ20316.1| OmpA-like transmembrane domain protein [Coxiella burnetii
CbuK_Q154]
Length = 248
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 59/223 (26%), Gaps = 46/223 (20%)
Query: 55 SGNYVGLHISRL-----YETHPLADT----INRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
+G YV T + T N+ GL + + F
Sbjct: 37 AGFYVRGEAGYGLVDKKSGTSKVNFTGVTLTENSHTNTKKSRGLNGRVAIGYAFNPY-FS 95
Query: 106 INCHTTAA-----KDDSTFYRLKEKYFIYGDVV-----------LKAGYSVDSLLIYGMG 149
+ T + L + + KA +D+ + G
Sbjct: 96 LESGFTYYHPAYRDVNIAGSALPLFSSVQAEGRQKINLYSIDLMGKATLPIDNFYAFIEG 155
Query: 150 GFGGAYVIDSSLEKVESDNS-------KNAKGRFDGHGSSVV---LGIGLDYMVNYDISL 199
G + ++ + + S + + + GIG+ Y + +I +
Sbjct: 156 GVAYVHTKFAAFTETGTAVSPLLPPVTSSVAVKVPSSSKGYIRPKAGIGVGYNITQNIGV 215
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SY + + + + N + +LG+ F
Sbjct: 216 DVSYSRVF----------GQGKINNTNYLPNLNAVTLGLTYKF 248
>gi|148978827|ref|ZP_01815180.1| hypothetical protein VSWAT3_07866 [Vibrionales bacterium SWAT-3]
gi|145962138|gb|EDK27423.1| hypothetical protein VSWAT3_07866 [Vibrionales bacterium SWAT-3]
Length = 199
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 53/188 (28%), Gaps = 25/188 (13%)
Query: 57 NYVGLHISRLYETHPLADTINR-KTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAK 114
YVG I Y + + + L + G+ D V G+
Sbjct: 35 FYVGADIGF-YNETEFEFPNDAIEDSSDLSDLSYNLVGGYEFNTHDVVKLGLETEYRKIG 93
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
K Y D+ +A + G YV + + K +
Sbjct: 94 --------KVSYSDSMDIEGQAFFVNVKPKFIVKGDALDLYVSLLAGVGSMDMDVKMSGT 145
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
++ +G L +V+ +I + YR + VE D ++ A
Sbjct: 146 SESKSEAAYQVGAELGAIVSDNIDIHLGYR--------------NARVEIYDVDVSSQTA 191
Query: 235 SLGINMHF 242
+G F
Sbjct: 192 YIGARYKF 199
>gi|89887384|gb|ABD78338.1| outer surface protein precursor [Wolbachia endosymbiont of Dirhinus
himalayanus]
gi|89887414|gb|ABD78353.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia endius]
gi|89887416|gb|ABD78354.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia endius]
Length = 197
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 59/176 (33%), Gaps = 14/176 (7%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG- 130
+ + ++ + L + + +++D + + D+ +
Sbjct: 31 IPNATGKEKDSPLKASFIAGGGAFGYKMDDIRVDVEGLYSWLNKDADVVGGTVADNLTAI 90
Query: 131 DVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
++ Y + + Y G G AYV + +KV D + G G +
Sbjct: 91 SGLVNVYYDIAIEDMPITPYVGVGVGAAYVSNPLAKKVTDD-------KASGFGVAYQAK 143
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + N A D + +A A G+ +F
Sbjct: 144 AGVSYDVTPEVKLYAGARY--FGSYGANFGKATKDDAGIKVLYSAVGAEAGVAFNF 197
>gi|85709639|ref|ZP_01040704.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
gi|85688349|gb|EAQ28353.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
Length = 370
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 58/209 (27%), Gaps = 29/209 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY---NSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
YV + D + G +G++ F A
Sbjct: 17 WYVQGDAGVMLVEDTTFDVDGSPGDAVADHDTGGDFGALVGYD--FGAFRLEAEVSYKEA 74
Query: 114 KDDSTFYR---------LKEKYFIYGDVVLKAG------YSVDSLLIYGM----GGFGGA 154
+ D + + + DV G + ++ L +G GF GA
Sbjct: 75 ELDEVAAGTEGLALNPSAQGGFNRFFDVRDALGETSALSFMINGLFDFGSDDGIQGFAGA 134
Query: 155 YVIDSSLEKVES-DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
V + ++ + + G + L G+ ++ + YRY S+
Sbjct: 135 GVGVARVDLDGRVNTNGPGVWDDSDTGLAWQLLAGIRAPLSDSFDVGLKYRYFNAESVSI 194
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + ++ N H + +F
Sbjct: 195 IDPLGR----PLEGDFNTHSILGTLTYNF 219
>gi|2367659|gb|AAC46160.1| opacity protein [Neisseria meningitidis]
Length = 234
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 29/122 (23%), Gaps = 33/122 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK--------------------GRFDGHG 180
D Y +V S ++ +
Sbjct: 126 DKFKPYIGARVAYGHVRHSIDSTKKTTEVLTSSHAPGTAPTIYNVPKTQNAYHESHSIRR 185
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 186 LGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMRY 232
Query: 241 HF 242
HF
Sbjct: 233 HF 234
>gi|327189631|gb|EGE56781.1| porin [Rhizobium etli CNPAF512]
Length = 347
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 8/161 (4%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
Y + + + Y+ PN +G+ +G + F + + ++ +
Sbjct: 181 YAGISVDELEDGPFYHGETPNNVGVAVGLGGKAGIFSYQVTAGYDVDNEEGAVRAMGTVA 240
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE--------SDNSKNAKGRFDG 178
G + L Y+ Y + A DN G F+
Sbjct: 241 VGPGTLGLAVVYATAPNAYYNKAEWAIAAEYAIKATDKLKITPAVQYYDNYGVTAGEFND 300
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
S+ G+ +DY + ++S S +Y+ S
Sbjct: 301 DVSAWKAGVTIDYQIVDNLSAKVSVQYLDPDNAEDVTSGYF 341
>gi|116252521|ref|YP_768359.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257169|emb|CAK08264.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 340
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 43/163 (26%), Gaps = 7/163 (4%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK 123
Y + + + + PN +G+ G F + I +D +
Sbjct: 172 GTFYAGISVDELEDGFYKSDEEPNNVGVAFGVGGTAGAFSYQITGGWDFDNEDGAIRAMG 231
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFG-----GAYVIDSSLEKVESDNSKNAKGRFDG 178
G + L A YS Y + D + D
Sbjct: 232 TVDIGPGTLGLAAVYSSGPNSYYSAAEWAVAAEYAIKATDKLKITPGVQYYGDYYVDGDD 291
Query: 179 HGSS--VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+G+ +DY + + AS +Y+ + +
Sbjct: 292 FSGGDAWKVGLTVDYQIVDNFYAKASVQYLDPEDEDDSTAGYF 334
>gi|22125935|ref|NP_669358.1| outer membrane protein W [Yersinia pestis KIM 10]
gi|108807555|ref|YP_651471.1| outer membrane protein W [Yersinia pestis Antiqua]
gi|108811831|ref|YP_647598.1| outer membrane protein W [Yersinia pestis Nepal516]
gi|21958875|gb|AAM85609.1|AE013807_3 putative outer membrane protein [Yersinia pestis KIM 10]
gi|108775479|gb|ABG17998.1| hypothetical protein YPN_1669 [Yersinia pestis Nepal516]
gi|108779468|gb|ABG13526.1| hypothetical protein YPA_1560 [Yersinia pestis Antiqua]
Length = 215
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 30/102 (29%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D SD D V G+DYMV+ + L+
Sbjct: 118 DKLRPYLGIGLNYTKFFDEKFNATGSDIGLTNLSVKDSW--GVAGQAGMDYMVSENWMLN 175
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ N + ++ + + G F
Sbjct: 176 MSVWWMNIESDV--KFNLAGEEHSINTRLAPWVFMFGAGYRF 215
>gi|189345795|ref|YP_001942324.1| surface antigen msp4 family protein [Chlorobium limicola DSM 245]
gi|189339942|gb|ACD89345.1| surface antigen msp4 family protein [Chlorobium limicola DSM 245]
Length = 215
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 43/181 (23%), Gaps = 18/181 (9%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YV + + G+ L + + +
Sbjct: 49 YVSGSVGIAMMEDSDVQFSGIDDGSITYDAGMAATLAAGLDMGYTRIEGEVGYQENGIEE 108
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ + + Y G G A V L + + A
Sbjct: 109 SDDVEVAITTFMVNGYYDFELPASPIKPYISAGIGVADVNAEELSLGDDSSLVLAGQ--- 165
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
LG G+ + V ++L A YRY+ N D +H LG
Sbjct: 166 -------LGAGVGFAVAPALTLDARYRYLMTTEAEFN--------GDTDISIGSHNVMLG 210
Query: 238 I 238
+
Sbjct: 211 L 211
>gi|157157791|ref|YP_001462516.1| outer membrane protein W [Escherichia coli E24377A]
gi|157079821|gb|ABV19529.1| outer membrane protein W [Escherichia coli E24377A]
gi|323977175|gb|EGB72262.1| OmpW family protein [Escherichia coli TW10509]
Length = 212
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + S + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTAKYKSGVNTVKDSVRLDPWVFMFSAG--YRF 212
>gi|758189|emb|CAA29743.1| PII protein [Neisseria gonorrhoeae]
Length = 281
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 24/90 (26%), Gaps = 14/90 (15%)
Query: 154 AYVIDSSLEKVESDNSKNAKG-RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + + KN G+ V ++L A YRY
Sbjct: 205 SDADAAVTVYPDGHPQKNTYQKSNSSRRLGFGAMAGVGIDVAPGLTLDAGYRYHNWGRLE 264
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 265 -------------NTRFKTHEASLGMRYRF 281
>gi|2642275|gb|AAC45992.1| opacity protein [Neisseria meningitidis]
Length = 239
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 23/86 (26%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + + ++L YRY
Sbjct: 167 GGTPTIYNQGSTQDAYHESHSIRRLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE---- 222
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ HF
Sbjct: 223 ---------NTRFKTHEVSLGMRYHF 239
>gi|2150072|gb|AAC32709.1| opacity protein [Neisseria meningitidis]
Length = 242
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 188 SNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 234
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 235 SLGMRYHF 242
>gi|315265620|gb|ADT92473.1| OmpA domain-containing protein [Shewanella baltica OS678]
Length = 185
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 54/198 (27%), Gaps = 33/198 (16%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
Q +G YVG + AD + + + G ++ FG+
Sbjct: 19 QVSAATDTTGFYVGGAL-----NRVTADAFDGSETGTGVGVYGGYN------FNEW-FGL 66
Query: 107 NCHTTAAKD--DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ A D D + D Y G V
Sbjct: 67 EANLFATGDLGDKDVDISAGALSFTPKFTAQIN---DIFSAYAKVGIASMAVNVDGYGY- 122
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
D G G+G++ V +++ SY + + + +S +
Sbjct: 123 ----------DEDFTGFGWTYGVGVNAAVTEHLNIRVSYD-----VTTGDLDADRSYLGL 167
Query: 225 VDRKGNAHIASLGINMHF 242
D + ++G++ F
Sbjct: 168 KDIDTDIKQFAVGVHYQF 185
>gi|89887402|gb|ABD78347.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia cameroni]
Length = 197
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 54/176 (30%), Gaps = 13/176 (7%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG- 130
+ + ++ + L + + +++D + + D+ +
Sbjct: 30 ITNATGKEKDSPLKASFIAGGGAFGYKMDDIRVDVEGLYSWLNKDADVVGDTVADNLTAI 89
Query: 131 DVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
++ Y V + Y G G AY+ + SK +
Sbjct: 90 SGLVNVYYDVAIEDMPITPYIGVGVGAAYISTPLKTPINDQKSKFGFAGQ--------VK 141
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V +I L A RY + + + S + D + A G+ +F
Sbjct: 142 AGVSYDVTPEIKLYAGARYFGSYGANFDKSGGEKDKGGYTVLYSTVGAEAGVAFNF 197
>gi|417410|sp|Q04879|OPAF_NEIGO RecName: Full=Opacity protein opA56; Flags: Precursor
gi|940796|emb|CAA79367.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 234
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 32/121 (26%), Gaps = 32/121 (26%)
Query: 141 DSLLIYGMGGFGGAYVIDS-SLEKVESDNSKNAKGRFDGH------------------GS 181
D Y +V S K + ++ G +
Sbjct: 127 DKFKPYIGARVAYGHVRHSIDSTKKTTKFLTSSYGGLNPTVYTEENTQNAHHQSNSIRRV 186
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + G+ + + ++L YRY + + H ASLG+
Sbjct: 187 GLGVIAGVGFDITPKLTLDTGYRYHYWGRLE-------------NTRFKTHEASLGVRYR 233
Query: 242 F 242
F
Sbjct: 234 F 234
>gi|28900665|ref|NP_800320.1| hypothetical protein VPA0810 [Vibrio parahaemolyticus RIMD 2210633]
gi|153836413|ref|ZP_01989080.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|260365540|ref|ZP_05778077.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|260877603|ref|ZP_05889958.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|260895384|ref|ZP_05903880.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260901656|ref|ZP_05910051.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|28809045|dbj|BAC62153.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149750315|gb|EDM61060.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|308085254|gb|EFO34949.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308090632|gb|EFO40327.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308108921|gb|EFO46461.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308114365|gb|EFO51905.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|328470603|gb|EGF41514.1| hypothetical protein VP10329_07382 [Vibrio parahaemolyticus 10329]
Length = 191
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 50/195 (25%), Gaps = 38/195 (19%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFGINCHTT-A 112
SG Y+G I T D++ N + + G+ Q V I T
Sbjct: 28 SGFYLGGGIGV---TTVYDDSVWPYAVNLDSNDSTYKLFGGY--QFNRIV-AIEAQYTRY 81
Query: 113 AKDDSTFYRLKEKY--FIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNS 169
F ++ GY+ DS + G G +
Sbjct: 82 GDIFDKFEDAPRTMVKPENIALMANLGYTFDSGWRPFATVGLGRTELD------------ 129
Query: 170 KNAKGRFDGHGSSVVLGIGLDY--MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
G +S G+G +Y +++ +Y D D
Sbjct: 130 ---FGSSSKAETSFRAGVGGEYSPKAIENLNFRIAY----------EVDTFVIDETYDDL 176
Query: 228 KGNAHIASLGINMHF 242
G++ F
Sbjct: 177 TIMLGSLYAGVSYKF 191
>gi|240013038|ref|ZP_04719951.1| protein II [Neisseria gonorrhoeae DGI18]
Length = 246
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+ V ++L A YRY + + H A
Sbjct: 192 SRSISSLGFGAMAGVGIDVAPGLTLDAGYRYHNWGRLE-------------NTRFKTHEA 238
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 239 SLGVRYRF 246
>gi|153833127|ref|ZP_01985794.1| outer membrane protein [Vibrio harveyi HY01]
gi|148870557|gb|EDL69465.1| outer membrane protein [Vibrio harveyi HY01]
Length = 205
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 56/205 (27%), Gaps = 37/205 (18%)
Query: 55 SGNYVGLHISRLYETHPL-----------ADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
SG Y+G I + + + + G+ Q+ V
Sbjct: 21 SGFYLGAGIGNTDFDDAGYMNDVSHAIARHSGASVPLTSDSDGSAYKLIAGY--QINRIV 78
Query: 104 FGINCHTT-AAKDDSTFYRLKE--KYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDS 159
I T A D + V GY+ D+ L + G G
Sbjct: 79 -AIEAQYTKYADTDVKVQNISALKLSHDTFTVAANVGYTFDNGLRPFATLGLGSISYEVK 137
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM--VNYDISLSASYRYIPHHIHSVNNSN 217
+N + G +V LG+GL+Y + ++ A Y + + +
Sbjct: 138 -------ENVTGNNFKESESGGTVRLGVGLEYAPVMLGGLAFRAGYEVDHYTLETAFK-- 188
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
D + +G F
Sbjct: 189 --------DYDQSVGSWYVGSTYKF 205
>gi|157963679|ref|YP_001503713.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157848679|gb|ABV89178.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 404
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 56/200 (28%), Gaps = 32/200 (16%)
Query: 40 ADNNVEYQDDEYGIWS-GNYVGLHISRLYETHPLADTI---------NRKTYNSLLPNGL 89
+WS G Y+G A T
Sbjct: 23 VQAAENESQQTEHMWSQGWYLGGQFGLATTNVSNAGLDELYEQAGIDASSTKVDDSGASY 82
Query: 90 GIELGHNI-QLEDFVFG--------INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV 140
G+ LG+ Q G + D+ + + Y GD G+S+
Sbjct: 83 GLFLGYKFNQYFSVEAGYLDLGERSVEFSGQTTDLDAYYDLAEHVYPETGD-----GWSL 137
Query: 141 DSLLIY-------GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
L Y G G ++ +D + GS V LG L Y +
Sbjct: 138 SVLGTYPLSERFSVTGKLGYFAWELDAVTSSIADEASQVGSD-SHSGSGVWLGAELGYQI 196
Query: 194 NYDISLSASYRYIPHHIHSV 213
N+D+ SY+++P V
Sbjct: 197 NHDMQAYVSYQHMPLDADEV 216
>gi|325134070|gb|EGC56724.1| opacity protein [Neisseria meningitidis M13399]
gi|325144281|gb|EGC66586.1| opacity protein [Neisseria meningitidis M01-240013]
gi|325206241|gb|ADZ01694.1| opacity protein [Neisseria meningitidis M04-240196]
Length = 226
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 28/123 (22%), Gaps = 34/123 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH--------------------- 179
D Y +V S ++ +
Sbjct: 117 DKFKPYIGARVAYGHVRHSIDSTKKTTEVVTSTHGGADTKPTIYNGESTQNAYHESHSIR 176
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 177 RLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 223
Query: 240 MHF 242
F
Sbjct: 224 YRF 226
>gi|294139759|ref|YP_003555737.1| OmpA family protein [Shewanella violacea DSS12]
gi|293326228|dbj|BAJ00959.1| OmpA family protein [Shewanella violacea DSS12]
Length = 361
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 55/180 (30%), Gaps = 10/180 (5%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+ YVG + P D K+ P + G+ + FG+
Sbjct: 21 TPWYVGGGLGVN-NYEPNCDMKTMKSCGEDDPYAWDVFGGYLF---NDYFGVELGYRDLG 76
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ + K G G S+ + + + ++ + S+N +
Sbjct: 77 -RAEWVDYANKMNDVGAK----GMSLGVVGFWPIANRWSLSAEAGAMNYLISNNKEYGTE 131
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ G + G G+ Y + ++ L A Y RY N +S+ ++
Sbjct: 132 YYSDSGIAPYFGAGIGYNITENLKLQAKYRRYENLDEDKWNTLAMESNYWGLELSYRFGT 191
>gi|293399309|ref|ZP_06643474.1| outer membrane protein [Neisseria gonorrhoeae F62]
gi|291610723|gb|EFF39833.1| outer membrane protein [Neisseria gonorrhoeae F62]
Length = 52
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 13/63 (20%)
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + +++L A YRY + + H ASLG+
Sbjct: 3 RVGLGVIAGVGFDITPNLTLDAGYRYHNWGRLE-------------NTRFKTHEASLGMR 49
Query: 240 MHF 242
F
Sbjct: 50 YRF 52
>gi|317047484|ref|YP_004115132.1| virulence-like outer membrane protein [Pantoea sp. At-9b]
gi|316949101|gb|ADU68576.1| virulence-related outer membrane protein [Pantoea sp. At-9b]
Length = 169
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 40/141 (28%), Gaps = 10/141 (7%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
++ + Y + G L + + G T + D T +
Sbjct: 18 AGSAMAQSTVSAGYAQSDYQGVANKANGFNLKYRYEDGTNPLGWIGSFTYTEKDRTDAGV 77
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
K YG A D IYG+ G G ++ + + D
Sbjct: 78 YNKGQYYGFTGGPAYRLNDWASIYGVVGLGYGKYQ----------SNGADRQKSDTSDVG 127
Query: 183 VVLGIGLDYMVNYDISLSASY 203
G GL + +++L Y
Sbjct: 128 FSYGAGLQFNPIQNVALDVGY 148
>gi|197337668|ref|YP_002157566.1| OmpA/MotB domain protein [Vibrio fischeri MJ11]
gi|197314920|gb|ACH64369.1| OmpA/MotB domain protein [Vibrio fischeri MJ11]
Length = 341
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 18/189 (9%), Positives = 47/189 (24%), Gaps = 36/189 (19%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
+VG + +Y+ G+ G +D+ + I + +
Sbjct: 30 FFVGGSLGYQLADDD------NYSYSDPGAPSFGVSGGVQF-NDDWRWDIGYQYS-DTLE 81
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ ++ + Y + + Y G V +
Sbjct: 82 ARQNNIELTPAWFETA---LRYDWELQKNYKAYARLGVAYWDVDKEIKGVETLSTQGISP 138
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+G+ Y + +I + ++YI + + +
Sbjct: 139 LGE----------VGISYALTPNIDIEGGFKYINEIGDKYTG------------RYDNNS 176
Query: 234 ASLGINMHF 242
+ +N F
Sbjct: 177 FVINLNYKF 185
>gi|134283534|ref|ZP_01770234.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|167901688|ref|ZP_02488893.1| hypothetical protein BpseN_05375 [Burkholderia pseudomallei NCTC
13177]
gi|134245283|gb|EBA45377.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
Length = 517
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/191 (9%), Positives = 49/191 (25%), Gaps = 21/191 (10%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ-LEDFVFGINCHTTAAKDD 116
Y G + + + +G G+ + G+ +
Sbjct: 327 YFG-RAGHADWDVESMLQVGHVGRDVINAWAVGSLAGYALDGWGTPRVGLQIDVASGDRH 385
Query: 117 STFYRLKEKYF-----IYGDVVLKAGYS-------------VDSLLIYGMGGFGGAYVID 158
R+ Y + GY+ L + GF +
Sbjct: 386 PGDGRVGTFNPLFPNGYYFTLAGFTGYANIVHIKPSITLKPSTRLSLLAALGFQWRQTEN 445
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
++ + + G + + + + D+MV ++ S + + +
Sbjct: 446 DAIYQQGNVAVPGTAGHGSRW-TGMYVQLRSDWMVTDNLISSIEAVHFQAGNAIRSLGGS 504
Query: 219 KSDVERVDRKG 229
+D ++ K
Sbjct: 505 NADYVGIELKY 515
>gi|86359168|ref|YP_471060.1| porin outer membrane protein [Rhizobium etli CFN 42]
gi|86283270|gb|ABC92333.1| porin outer membrane protein [Rhizobium etli CFN 42]
Length = 347
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 48/163 (29%), Gaps = 8/163 (4%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
Y + + + YN N +G+ +G + F + I ++ +
Sbjct: 179 AFYAGISVDELEDSPFYNGETANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGT 238
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE--------SDNSKNAKGRF 176
G + L Y+ + Y + A +N G F
Sbjct: 239 VAVGPGTLGLAVVYASNPNAYYNKAEWAIAAEYAIKATDKLKITPAVQYYNNYGVTAGEF 298
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + G+ +DY + ++S S +Y+ S
Sbjct: 299 NDDVDAWKAGVTIDYQIVDNLSAKVSVQYLDPDNADDVTSGYF 341
>gi|2150102|gb|AAC32724.1| opacity protein [Neisseria meningitidis]
Length = 239
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 29/123 (23%), Gaps = 34/123 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH--------------------- 179
D Y +V S ++ +
Sbjct: 130 DKFKPYIGARVAYGHVRHSIDSTKKTTEVVTSTHGGADTKPTIYNGESTQNAYHESHSIR 189
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 190 RLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 236
Query: 240 MHF 242
HF
Sbjct: 237 YHF 239
>gi|121997100|ref|YP_001001887.1| hypothetical protein Hhal_0291 [Halorhodospira halophila SL1]
gi|121588505|gb|ABM61085.1| hypothetical protein Hhal_0291 [Halorhodospira halophila SL1]
Length = 249
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 32/121 (26%), Gaps = 5/121 (4%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY- 146
+G L + Q G + D+ Y+ +
Sbjct: 76 AIGGHLRASWQSA---VGGFLYFDYLGTDACVGDCLGGGDAEDTRAGLEHYAFGLGWHWE 132
Query: 147 -GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ G G VE + D + +GIG+ ++ ++ A Y Y
Sbjct: 133 EVLAGTGLYATAARERRNVEKCEADEDDACRDDRRAGATVGIGVQRPLSDRWAVDAHYAY 192
Query: 206 I 206
Sbjct: 193 Y 193
>gi|332290264|ref|YP_004421116.1| outer membrane protein W [Gallibacterium anatis UMN179]
gi|330433160|gb|AEC18219.1| outer membrane protein W [Gallibacterium anatis UMN179]
Length = 225
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 29/106 (27%), Gaps = 5/106 (4%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--HGSSVVLGIGLDYMVNYDISL 199
Y G + D+ + V+ G+D + +
Sbjct: 120 PARPYVGAGINYTHFFDTHFNSTIDNAGLGVTAHNLKLKDSWGPVVNAGIDINITDKLFF 179
Query: 200 SASYRYIPHHIHS---VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S + + + +++ K + + I +G+ F
Sbjct: 180 NTSVWWAKIKTKATFDLKDASGKMHSQEARVTLDPTIFFVGLGYRF 225
>gi|313149887|ref|ZP_07812080.1| predicted protein [Bacteroides fragilis 3_1_12]
gi|313138654|gb|EFR56014.1| predicted protein [Bacteroides fragilis 3_1_12]
Length = 184
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 43/161 (26%), Gaps = 5/161 (3%)
Query: 85 LPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL 144
+ + + Q D G+N A + +K +
Sbjct: 26 KGFFVEMNAAYGQQYIDIDGGVNEREGYAILMPAI-GYQFNSRWAAGFRMKFDTRNSNFT 84
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV---LGIGLDYMVNYDISLSA 201
Y ++ ++ + + D + + G Y++ IS
Sbjct: 85 TYSPY-VQYNFLRWKKVKVFAEGQLALSYPKDDEWNDNYTEAGISFGASYVLCNHISFML 143
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y YI + N A R+ N LGI + F
Sbjct: 144 RYLYIGYSTDPYRNEGAYLGNGRLVLDANTRRLQLGIQITF 184
>gi|325130085|gb|EGC52872.1| opacity protein [Neisseria meningitidis OX99.30304]
gi|325202285|gb|ADY97739.1| opacity protein [Neisseria meningitidis M01-240149]
Length = 227
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 30/123 (24%), Gaps = 33/123 (26%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--------------------H 179
D Y +V S ++ N G +
Sbjct: 118 FDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIR 177
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 178 RLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 224
Query: 240 MHF 242
F
Sbjct: 225 YRF 227
>gi|254563352|ref|YP_003070447.1| TonB-dependent iron outer membrane transporter [Methylobacterium
extorquens DM4]
gi|254270630|emb|CAX26634.1| putative TonB-dependent iron outer membrane transporter (fiu)
[Methylobacterium extorquens DM4]
Length = 746
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 13/130 (10%)
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ ++ F K G + AGY+ D I GG+ + + D +
Sbjct: 586 SSTEAGFSAGPGKTNTRGAEIGIAGYATDWWQI--SGGYAYTEPRIVADIDDDGDVIQAG 643
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
++ L + + S+ Y Y S +N+ R D
Sbjct: 644 NLVGGVPLNTFSLWN--KFDIGERFSVGVGYLYQDASFASSDNAVRLPSFSRFD------ 695
Query: 233 IASLGINMHF 242
G+ F
Sbjct: 696 ---AGVFYAF 702
>gi|288942088|ref|YP_003444328.1| aromatic hydrocarbon degradation membrane protein [Allochromatium
vinosum DSM 180]
gi|288897460|gb|ADC63296.1| membrane protein involved in aromatic hydrocarbon degradation
[Allochromatium vinosum DSM 180]
Length = 451
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 46/150 (30%), Gaps = 17/150 (11%)
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFV---FGINCHTTAAKDDSTFYRLKEKYFIY 129
+ N + G G+++G QL + + + D E +
Sbjct: 220 GNPDNLSSRGREGVFGWGLQVGALWQLNERLSLGAAYQTQVDFERFDKYSDLFAEDGDLD 279
Query: 130 GDVVLKAGYSV----DSLLIYGMGGFGGAYVIDSSLEKVES------DNSKNAKGRFDGH 179
++ G + D L + + V S + ++ + + G G
Sbjct: 280 APALVNIGLAFKARPDLTLAFDVQHIWYGDVDALSNDMTKNIMLCMQGYTAHCLGGSQGV 339
Query: 180 GSSV----VLGIGLDYMVNYDISLSASYRY 205
G V G + + D++L A Y Y
Sbjct: 340 GFGWRDMTVYKFGAQWAMRPDLTLRAGYSY 369
>gi|225850221|ref|YP_002730455.1| aromatic hydrocarbon degradation membrane protein [Persephonella
marina EX-H1]
gi|225646273|gb|ACO04459.1| membrane protein involved in aromatic hydrocarbon degradation
[Persephonella marina EX-H1]
Length = 444
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 52/178 (29%), Gaps = 9/178 (5%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ-LEDFVFGINCHTTA 112
W +G + + + DT G+G LG N + E+ G + ++
Sbjct: 194 WGSLDLGAELGYDSDGDGIPDTFFNAGGGQSQSYGIGASLGINFKPTENICIGASYQSSV 253
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG-GFGGAYVIDSSLEKVESDNSKN 171
+ ++ + +G G+ + + S
Sbjct: 254 KMTYKNVFDSNGDGKFED-------LKLEQPQEFAVGVGYRPVETFKIGFDVRWINWSDA 306
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ V +G +Y V ++L A Y Y I S +N N + D
Sbjct: 307 DGYKQFKWEDQWVFAVGGEYKVTPKLALRAGYNYGKTPIKSKSNLNTANANNIPDFSQ 364
>gi|145298279|ref|YP_001141120.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851051|gb|ABO89372.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 352
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 48/180 (26%), Gaps = 25/180 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG D + S L + G+N G + D
Sbjct: 27 WYVGAGGGWAIAH----DLGDFGKDASKDATALTLFGGYNFTEN---LGAELGYLSTGDW 79
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
V+ + D ++ GG +V +
Sbjct: 80 DVQGTDFSSQGATLSVIGRLPLG-DIFSVFAEGGGYLYHVKSINGG-------------- 124
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ + G+GL ++ + + A YRY+ ++ N K + A+L
Sbjct: 125 -DDNLAPLAGLGLTAKLHDWVDIQARYRYL--VRVGDDSDNDKVGSGTQRWVSDISTATL 181
>gi|218709042|ref|YP_002416663.1| hypothetical protein VS_1048 [Vibrio splendidus LGP32]
gi|218322061|emb|CAV18124.1| hypothetical outer membrane protein [Vibrio splendidus LGP32]
Length = 251
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 18/151 (11%), Positives = 47/151 (31%), Gaps = 14/151 (9%)
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G + Q+ V T + + + + + G+++ + Y +
Sbjct: 114 GGVSYQVITLVGMFEA-TAGSDLGFRHNGIYAEAAWRLPIR-RNGWAITPSIGYS---YN 168
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + S+ ++ FD +G+G V ++ ++ RY
Sbjct: 169 SKRLNNHLYGVSSSEAARTNLDEFDADWDGQYFIGLGGYLHVTPNVRVTGGVRYTNLEG- 227
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N+ ++ N +G+ F
Sbjct: 228 --DIENSPILESGINMAAN-----VGVAYVF 251
>gi|212213180|ref|YP_002304116.1| outer membrane porin P1 [Coxiella burnetii CbuG_Q212]
gi|212011590|gb|ACJ18971.1| outer membrane porin P1 [Coxiella burnetii CbuG_Q212]
Length = 223
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 57/191 (29%), Gaps = 29/191 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPN------------GLGIELGHNIQLEDFV 103
G ++GL T+ T+ + + G ELG+ + ++
Sbjct: 6 GFHIGLGFGYKSYTYDQVGTVTVTIDGGTVLSVLHPVSASITQFGPVGELGYTFASDWWI 65
Query: 104 FGINCHTTAAKDD----------STFYRLKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFG 152
G+ + Y + + + +L AG V+ +Y G+
Sbjct: 66 AGVKAQYQYDNVRSVHMMDVPLVGSNYSYRTRLGSHLTAMLLAGIKVNEANAVYLEAGYS 125
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + + + GIG + ++ L SY Y + S
Sbjct: 126 TVWGKTTLFGP------GPVAVSMKNRLNGGIAGIGWRHYFMNNVFLDLSYDYALYRSKS 179
Query: 213 VNNSNAKSDVE 223
+ + + ++
Sbjct: 180 NSVTLSSANAS 190
>gi|28898531|ref|NP_798136.1| hypothetical protein VP1757 [Vibrio parahaemolyticus RIMD 2210633]
gi|28806749|dbj|BAC60020.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 375
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 59/192 (30%), Gaps = 23/192 (11%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIEL-GHNIQLEDFVFGINCHTTAAKDDSTFYR 121
+ Y + + ++ GL + L G N + T +
Sbjct: 185 VGYGYSSDVTISEDTDISIDTNYSAGLNLTLSGDNYRWNFAYLNAEYDQT-TVLSNAMAP 243
Query: 122 LKEKYFIYGDVVLKA------------GYSVDSLLIYGMG-----GFGGAYVIDSSLEKV 164
+ + G + LKA Y VD + + G +L K
Sbjct: 244 IPGQGSAVGTIRLKAEDQHIQLFSLGAKYEVDRITVTAEGQTSDISTSWYAATSYNLNKF 303
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + + + GL + V+Y++S++A +++ + NN + +
Sbjct: 304 TPYVVYGQQFDDNEKKTGDSVLTGLRFDVDYNVSVNAEWQHF----KAFNNDSGAFSLPP 359
Query: 225 VDRKGNAHIASL 236
D N + L
Sbjct: 360 ADTNANLYTVML 371
>gi|264677838|ref|YP_003277744.1| OmpW [Comamonas testosteroni CNB-2]
gi|262208350|gb|ACY32448.1| OmpW [Comamonas testosteroni CNB-2]
Length = 204
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 12/103 (11%), Positives = 28/103 (27%), Gaps = 12/103 (11%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+ Y G + + + + L +G DY ++ + SL
Sbjct: 114 FGAFKPYVGAGVNYTRFSN--------VDILDGAVTVKKNSFGGALQVGFDYALDKNWSL 165
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + E K + + +G+ F
Sbjct: 166 NFDIKKVYLGTKV----TGAGVFENTKFKVDPWLVGVGVGYRF 204
>gi|260596738|ref|YP_003209309.1| hypothetical protein CTU_09460 [Cronobacter turicensis z3032]
gi|260215915|emb|CBA28485.1| Uncharacterized protein yaiT [Cronobacter turicensis z3032]
Length = 525
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 49/154 (31%), Gaps = 8/154 (5%)
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN-CHTTAAKDDSTFYRLKEKYF 127
+ +++ S G G++LG++ Q + + D Y+L
Sbjct: 361 SAVMSNGQAVSGDASSDAWGFGLKLGYDWQFNQQGYLTPYASISGLFQDGDGYQLSNDMR 420
Query: 128 I----YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS-- 181
+ Y + + G + YG Y + + + N + G +G
Sbjct: 421 VNSQSYDSLRYELGADLGYTFNYGNDQAFTPYAKLAYVYDDANGNDADVNGDNIDNGVEG 480
Query: 182 -SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+V G+G + + S A Y+ +
Sbjct: 481 SAVRAGLGGKFSFTKNFSAYADANYLGGGDVDQD 514
>gi|189466586|ref|ZP_03015371.1| hypothetical protein BACINT_02961 [Bacteroides intestinalis DSM
17393]
gi|189434850|gb|EDV03835.1| hypothetical protein BACINT_02961 [Bacteroides intestinalis DSM
17393]
Length = 1118
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 30/77 (38%)
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D+ ++A Y V+ L G+ G + + + K ++ L
Sbjct: 741 DWLTDLKIRASYGVNGTLPTDYFGYRGLSSLTNGYLEQPGIIQSQLKNDDLQWETNYNLN 800
Query: 187 IGLDYMVNYDISLSASY 203
+GLD+ + ++++ Y
Sbjct: 801 LGLDFSLWNRLNVTLEY 817
>gi|190893414|ref|YP_001979956.1| porin outer membrane protein [Rhizobium etli CIAT 652]
gi|190698693|gb|ACE92778.1| porin outer membrane protein [Rhizobium etli CIAT 652]
Length = 347
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 48/163 (29%), Gaps = 8/163 (4%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
Y + + + YN N +G+ +G + F + I ++ +
Sbjct: 179 AFYAGISVDELEDSPFYNGETANNVGVAIGLGGKAGAFSYQITAGYDTDNEEGAVRAMGT 238
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE--------SDNSKNAKGRF 176
G + L Y+ + Y + A +N G F
Sbjct: 239 VAVGPGTLGLAVVYASNPNAYYNKAEWAIAAEYAIKATDKLKITPAVQYYNNYGVTAGEF 298
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + G+ +DY + ++S S +Y+ S
Sbjct: 299 NDDVDAWKAGVTIDYQIVDNLSAKVSVQYLDPDNAEDVTSGYF 341
>gi|33090152|gb|AAP93881.1| outer surface protein [Wolbachia endosymbiont of Pthirus pubis]
Length = 196
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 14/176 (7%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG- 130
+ + +++ + L + + +++D + + D+ +
Sbjct: 30 ITNATSKEKDSPLKASFIAGGGAFGYKMDDIRVDVEGLYSWLNKDADVVGGTVADNLTAI 89
Query: 131 DVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
++ Y + + Y G G AYV + +KV D + G G +
Sbjct: 90 SGLVNVYYDIAIEDMPITPYVGVGVGAAYVSNPLAKKVTDD-------KASGFGVAYQAK 142
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + N A D + + A G+ +F
Sbjct: 143 AGVSYDVTPEVKLYAGARY--FGSYGANFGKATKDDAGIKVLYSTVGAEAGVAFNF 196
>gi|83031691|gb|ABB96964.1| outer surface protein [Wolbachia endosymbiont of Bactrocera
dorsalis]
Length = 183
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 17 DNSDYSPLKASFLAGGGAFGYKIDDIRVDVEGVYSYLNKNNVTDAKFTPDTIADSVTAIS 76
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 77 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 128
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 129 GVSYDVTPEVKLYAGARYFGPYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 183
>gi|329962538|ref|ZP_08300519.1| hypothetical protein HMPREF9446_02106 [Bacteroides fluxus YIT
12057]
gi|328529794|gb|EGF56686.1| hypothetical protein HMPREF9446_02106 [Bacteroides fluxus YIT
12057]
Length = 171
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 55/175 (31%), Gaps = 27/175 (15%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK----DDSTFYRLKEKYFIYGDV 132
+ Y +G LG+ ++E GI + S Y + DV
Sbjct: 15 SAGAYAQKGKQAIGFGLGYGTEIESIGLGIKYQYNITNPIRIEPSLNYFFENDNVSMLDV 74
Query: 133 VLKAGYS---VDSLLIYGMGGFGGAYVIDSSLE--KVESDNSKNAKGRFDGHGSSVVLGI 187
+ Y ++ +Y + G + + + + G + V LG+
Sbjct: 75 NVNFHYLCPVASNVKLYPLFGLTLSNWMFDMYDIDWDGDHVHVDGDGNHNECRFGVNLGV 134
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G ++ ++ +++ +RY ++ + + ++G F
Sbjct: 135 GAEFALSRSWAMNLEFRY------------------QLVSDFDQGVINIGAAYRF 171
>gi|320188048|gb|EFW62715.1| Outer membrane protein W precursor [Escherichia coli O157:H7 str.
EC1212]
Length = 212
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + S + + V + S+G F
Sbjct: 168 DWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSVG--YRF 212
>gi|17548067|ref|NP_521469.1| outer membrane W signal peptide protein [Ralstonia solanacearum
GMI1000]
gi|17430373|emb|CAD17138.1| putative outer membrane w signal peptide protein [Ralstonia
solanacearum GMI1000]
Length = 241
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 39/144 (27%), Gaps = 11/144 (7%)
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVE-- 165
+ + ++ V+ K G + Y G + D +
Sbjct: 98 IEGTDSFARYGQIGSAKQWSPTVLAKWYFGGADSKFRPYVGAGLNYTWFTDEKITNSAFQ 157
Query: 166 ----SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS---VNNSNA 218
+ + + V+ G Y + D L S Y+P + +N
Sbjct: 158 TQVLGNGFPSTSTVSTDSSLNPVVSAGATYAITKDWFLGLSVSYLPLKTTAKIDTTLANG 217
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ V K N + L + F
Sbjct: 218 QHAVTEAKIKINPIVTFLSVGYRF 241
>gi|308049016|ref|YP_003912582.1| hypothetical protein Fbal_1302 [Ferrimonas balearica DSM 9799]
gi|307631206|gb|ADN75508.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799]
Length = 179
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 21/75 (28%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
++ + N + + + GL Y + + S Y+Y+ + +
Sbjct: 105 RLNAFAGISMGGVGNKLQGKNSNDFTWGGQAGLQYNLTSNWSAELRYQYLDMDYDKMGLT 164
Query: 217 NAKSDVERVDRKGNA 231
S +
Sbjct: 165 VEDSQRVGLAIDYRF 179
>gi|240120174|ref|ZP_04733136.1| protein II [Neisseria gonorrhoeae PID24-1]
Length = 245
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+ V ++L A YRY + + H A
Sbjct: 191 SRSISSLGFGAMAGVGIDVAPGLTLDAGYRYHNWGRLE-------------NTRFKTHEA 237
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 238 SLGVRYRF 245
>gi|217974019|ref|YP_002358770.1| outer membrane protein W [Shewanella baltica OS223]
gi|217499154|gb|ACK47347.1| OmpW family protein [Shewanella baltica OS223]
Length = 214
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 28/98 (28%), Gaps = 5/98 (5%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D+ + + G+DY VN + ++AS
Sbjct: 122 PYIGVGVNYTNFYDNEFTNDLGGALTDLSMT---TSWGLAAQAGVDYQVNKNWLVNASVW 178
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + V D ++ S+G F
Sbjct: 179 YAQISSDVKFKLSGDTVVIGTDIDPWVYMVSVG--YTF 214
>gi|153834409|ref|ZP_01987076.1| long-chain fatty acid transport protein [Vibrio harveyi HY01]
gi|148869180|gb|EDL68208.1| long-chain fatty acid transport protein [Vibrio harveyi HY01]
Length = 424
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 22/193 (11%), Positives = 39/193 (20%), Gaps = 24/193 (12%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHN----IQLE-DFVFGI----------NC 108
+ P K L + G +G N +L+ + FG
Sbjct: 192 GWDFAGVPGLVPGVPKGTTLLDADAAGFGVGFNLGTVFELDENNRFGFSYRYSPEIEAEG 251
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
T K + + + +
Sbjct: 252 DITYVYAGQKDSNGKLNLPLPDMAEFSGYHKIKDTKFAVHYSVQWIGWSAFDTLDGTVNG 311
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ + IG Y +N + +L Y Y + S
Sbjct: 312 TDQTFNEY-EWQDGWHYAIGGTYYMNSNWTLRTGYMY--------DTSAQDQKTSVSVPD 362
Query: 229 GNAHIASLGINMH 241
+ S G H
Sbjct: 363 SDRQWFSAGATYH 375
>gi|262193896|ref|YP_003265105.1| hypothetical protein Hoch_0574 [Haliangium ochraceum DSM 14365]
gi|262077243|gb|ACY13212.1| hypothetical protein Hoch_0574 [Haliangium ochraceum DSM 14365]
Length = 221
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 7/92 (7%), Positives = 25/92 (27%), Gaps = 7/92 (7%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G +++ + G+G + + I++ Y +
Sbjct: 132 VAGVVPSILLSSARANEDGTTTSTEVRRWDLGLFAGLGASFALTERINVHLEASYTS-GL 190
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ + + ++G+ F
Sbjct: 191 LTIDRTKE------FEVLNRTMQLTVGVGYRF 216
>gi|260912962|ref|ZP_05919447.1| outer membrane protein OprG [Pasteurella dagmatis ATCC 43325]
gi|260632952|gb|EEX51118.1| outer membrane protein OprG [Pasteurella dagmatis ATCC 43325]
Length = 204
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 27/98 (27%), Gaps = 8/98 (8%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G E + V G+D + ++ L+ +
Sbjct: 115 PYLGAGVNYTNF------FSEKEVLAGVSDLKLKDSWGPVFNAGVDIKLADNLYLNTAVW 168
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + K +V+ K + + +G+ F
Sbjct: 169 YAKIKTKASFKLAGK--EHKVNVKLDPAVVFVGLGYRF 204
>gi|254672239|emb|CBA05215.1| Opacity protein and related surface antigens [Neisseria
meningitidis alpha275]
Length = 189
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 28/125 (22%), Gaps = 35/125 (28%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------------------- 180
D Y +V + + +K
Sbjct: 78 FDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSVTKPGEIVETPTSKPAYHESHS 137
Query: 181 ---SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ + G+ + + ++L YRY + + H SLG
Sbjct: 138 ISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLG 184
Query: 238 INMHF 242
+ F
Sbjct: 185 MRYRF 189
>gi|182677770|ref|YP_001831916.1| OmpW family protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633653|gb|ACB94427.1| OmpW family protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 267
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 28/106 (26%), Gaps = 7/106 (6%)
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
Y G + + + + +G DYM+N
Sbjct: 155 WTDFGKFQPYIGVGVNYTHYFNQQAAYGVLSHLSVNDS------WGIAGQVGFDYMINDH 208
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + I SV + + R + + + GI F
Sbjct: 209 WGVNVDVKKIMME-PSVTANLGNGTLLRGGARIDPWLIGAGITYRF 253
>gi|34329807|gb|AAQ63998.1| outer surface protein [Wolbachia endosymbiont of Linognathus
setosus]
Length = 196
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 14/176 (7%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG- 130
+ + ++ + L + + +++D + + D+ +
Sbjct: 30 ITNATGKEKDSPLKASFIAGGGAFGYKMDDIRVDVEGLYSWLNKDADVVGGTVADNLTAI 89
Query: 131 DVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
++ Y + + Y G G AYV + +KV D + G G +
Sbjct: 90 SGLVNVYYDIAIEDMPITPYVGVGVGAAYVSNPLAKKVTDD-------KASGFGVAYQAK 142
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + N A D + + A G+ +F
Sbjct: 143 AGVSYDVTPEVKLYAGARY--FGSYGANFGKATKDDAGIKVLYSTVGAEAGVAFNF 196
>gi|2367647|gb|AAC46154.1| opacity protein [Neisseria meningitidis]
Length = 235
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 28/124 (22%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V + +K + ++
Sbjct: 125 DKFKPYIGARVAYGHVKHQVHSVETKTTTITSKPKNGSPQGGPIIQTDPSKPPYHESHSI 184
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H SLG+
Sbjct: 185 SSVGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 231
Query: 239 NMHF 242
F
Sbjct: 232 RYRF 235
>gi|86144695|ref|ZP_01063027.1| outer membrane protein P1 precursor [Vibrio sp. MED222]
gi|85837594|gb|EAQ55706.1| outer membrane protein P1 precursor [Vibrio sp. MED222]
Length = 370
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 3/92 (3%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFD---GHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G AY V D S + D +G G + ++ D++L SY+Y
Sbjct: 277 GVEYAYEDWLLYSGVSGDTSPVSSQNRDVLLPLDKQWRIGFGAEKKISNDLNLGLSYQYQ 336
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+N + H +L +
Sbjct: 337 DLGHGEINADSGLFQPSGSYSTNRVHFVTLSL 368
>gi|315606740|ref|ZP_07881750.1| RNA polymerase ECF-type sigma factor [Prevotella buccae ATCC 33574]
gi|315251595|gb|EFU31574.1| RNA polymerase ECF-type sigma factor [Prevotella buccae ATCC 33574]
Length = 598
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 61/180 (33%), Gaps = 23/180 (12%)
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD------STFYRLKEK 125
D + + + P G L N QL ++FG + T K D + +K
Sbjct: 424 DDHVLGEKAHHHRPVTFGFSL--NKQLSPHWIFGTGLNYTGLKSDFTSEFNGATLKKTQK 481
Query: 126 YFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG---- 178
G + L+ Y + Y GG + SS +K ++
Sbjct: 482 ISYIG-IPLRLTYRIWGKGRFNAYATGGVTFELPVHSSFKKKYIVTPDSSYTLQRDIHPR 540
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ SV LG+G+ Y + SL Y+ ++ N+ + + R + G+
Sbjct: 541 NQWSVNLGVGVQYRLFKPFSL-----YLEPNMFYYFNNGSDLETYRTEHPFTF-TVPFGL 594
>gi|284008971|emb|CBA75865.1| hypothetical protein ARN_31760 [Arsenophonus nasoniae]
Length = 108
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 7/90 (7%)
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-------GHGSSVVLGIGLDYMVNY 195
Y G G AY+ + + S + + G G+ Y V+
Sbjct: 14 FTPYLSAGLGYAYLSQKTSQIATLGISGGKTSTETLQTRSHATNNFAWSAGAGIKYTVSQ 73
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERV 225
D S SY+Y+ V+ N V
Sbjct: 74 DFSFDLSYKYLDAGQAEVDYFNLDGVETNV 103
>gi|145220337|ref|YP_001131046.1| porin, opacity type [Prosthecochloris vibrioformis DSM 265]
gi|145206501|gb|ABP37544.1| porin, opacity type [Chlorobium phaeovibrioides DSM 265]
Length = 189
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 45/167 (26%), Gaps = 17/167 (10%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YV + + + ++ + + + G + D D
Sbjct: 28 YVSGNAGITW-----MNDVDYAGHKAEMDAGFALFGAIGCDYGDTRLEGELGYMQNDVDK 82
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y +D+ + Y G G A + G
Sbjct: 83 VDGASASGDISVISLMANGYYDIDTGGGIEPYITAGVGFAQGHAEDVTN---------FG 133
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
++ + +G G+ V ++ + YRY + + ++
Sbjct: 134 TWNETTLAWQVGAGVAVPVGNNVMVDLRYRYFDTTDMLDDTNIGSNN 180
>gi|217331218|gb|ACK38252.1| OmpW [Vibrio cholerae]
Length = 158
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 32/106 (30%), Gaps = 4/106 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S + D + G+DYM+N
Sbjct: 57 FGEANSTFRPYVGAGLNYTTFFDESFNGTGRSATLTDLKLDDSW--GLAANAGVDYMLND 114
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
L+AS Y + + A D + D K N + +
Sbjct: 115 SWFLNASVWYANIETTATYKAGA--DAKSTDVKINPWVFMIAGGYK 158
>gi|167582569|ref|ZP_02375443.1| outer membrane protein, OmpW family [Burkholderia thailandensis
TXDOH]
gi|167620682|ref|ZP_02389313.1| outer membrane protein, OmpW family [Burkholderia thailandensis
Bt4]
gi|257137694|ref|ZP_05585956.1| OmpW family outer membrane protein [Burkholderia thailandensis
E264]
Length = 239
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 25/196 (12%), Positives = 51/196 (26%), Gaps = 19/196 (9%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGINCHTTAAKDDST 118
++ H + +T + +G+ G+ + + + V GI S
Sbjct: 48 NVGGTPVNHEVPNTGAGID----NADTIGLAAGYFLTDHIVTELVAGIPPRFNLNGKGSL 103
Query: 119 FYRLKEKYFIYGDVVLKAGYSVD----SLLIYGMGGFGGAYVID--SSLEKVESDNSKNA 172
+ + Y + Y G + + E
Sbjct: 104 EQFGVLGHAYQWSPAVLLKYYFNDAKAKFRPYVGIGASYIWFTGAKITNSAFERGALGGP 163
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ + V+ G Y S YIP + + + + + + + A
Sbjct: 164 TSVQTSNQWAPVINAGFTYNFTDHWFGGLSVSYIPVSLTATLTTQRPTPIGTLTQTSQAK 223
Query: 233 IAS------LGINMHF 242
IA L I F
Sbjct: 224 IALNPIVTYLNIGYRF 239
>gi|2367653|gb|AAC46157.1| opacity protein [Neisseria meningitidis]
Length = 241
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 187 SNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 233
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 234 SLGMRYHF 241
>gi|2150080|gb|AAC32713.1| opacity protein [Neisseria meningitidis]
Length = 244
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H A
Sbjct: 190 SNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEA 236
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 237 SLGVRYRF 244
>gi|16272363|ref|NP_438576.1| hypothetical protein HI0414 [Haemophilus influenzae Rd KW20]
gi|260580523|ref|ZP_05848351.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|2495674|sp|Q57392|Y414_HAEIN RecName: Full=Uncharacterized protein HI_0414
gi|1573388|gb|AAC22081.1| predicted coding region HI0414 [Haemophilus influenzae Rd KW20]
gi|260092865|gb|EEW76800.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 70
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 13/52 (25%)
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + +I+L YRY + + H AS G+ F
Sbjct: 32 YDITPNITLDLGYRYNDWGRLE-------------NVRFKTHEASFGVRYRF 70
>gi|311280308|ref|YP_003942539.1| virulence-related outer membrane protein [Enterobacter cloacae
SCF1]
gi|308749503|gb|ADO49255.1| virulence-related outer membrane protein [Enterobacter cloacae
SCF1]
Length = 170
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 44/141 (31%), Gaps = 10/141 (7%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
S + T + + ++ G L + + ++ G+ T + ++T
Sbjct: 19 GSAVAGTSTVTGGYAQSDMQGVVNKANGFNLKYRYEQDNSPLGVIGSFTYTEKNNTDGGS 78
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
K YG A D IYG+ G G + + D
Sbjct: 79 YNKSQYYGITAGPAYRINDWASIYGVVGLGYGKFQSTDF----------PTAKADTSDYG 128
Query: 183 VVLGIGLDYMVNYDISLSASY 203
G G+ + +++L SY
Sbjct: 129 FSYGAGVQFNPIENVALDFSY 149
>gi|167587721|ref|ZP_02380109.1| OmpW family protein [Burkholderia ubonensis Bu]
Length = 243
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 52/193 (26%), Gaps = 15/193 (7%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTF 119
P+ +I + +G+ G+ + + V GI +F
Sbjct: 51 YSVGGRPVNQSIPNTGAGISDADTIGLAAGYFVTDHISTELVMGIPPKFDINGKGRFESF 110
Query: 120 YRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGR 175
+L Y ++L+ + + Y G + + E+
Sbjct: 111 GKLGNVYQWSPALLLRYHFNEANAKFRPYLGIGATYVWFTGAKITNSAFENGVLGGPTSA 170
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS------NAKSDVERVDRKG 229
+ + V G Y S YIP + + + ++ +
Sbjct: 171 TTSNQWAPVFNAGFTYNFTDHWFAGLSISYIPVSVTATFTTAKRTQVGTLTETSKAKISL 230
Query: 230 NAHIASLGINMHF 242
N + L + F
Sbjct: 231 NPIVTYLNVGYRF 243
>gi|332304416|ref|YP_004432267.1| OmpW family protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332171745|gb|AEE20999.1| OmpW family protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 227
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 6/99 (6%)
Query: 145 IYGMGGFGGA-YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
Y G + + L E+ + N + IG+DY ++ ++AS
Sbjct: 134 PYLGVGLNYTVFFDEQFLGSREAQSFSNLSLDES---FGIAAQIGMDYTLDEHWLINASV 190
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
RYI + + VD + +G F
Sbjct: 191 RYIDIDTKAKFDVLDLPAQVSVDIDPWVYSIMVG--YTF 227
>gi|312892040|ref|ZP_07751540.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311295412|gb|EFQ72581.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 460
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 26/246 (10%), Positives = 61/246 (24%), Gaps = 33/246 (13%)
Query: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
+NF L + L+ + + WS +G
Sbjct: 3 LNFKKTSLLLSSLMAGGA---------LFAQTPDSTQTKNYVEPFSPGSAFRTWS---IG 50
Query: 61 LHISRLY------ETHPLADTINRKTYNSLLPN----GLGIELGHNIQLEDFVFGINCHT 110
++ L A + Y + G++ + GI
Sbjct: 51 INGGVLTPFTIFNGKQDFASPHEQIGYGGFIKKQILPSFGLQA--DFLKGKLGGGI-AAI 107
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSL-------LIYGM-GGFGGAYVIDSSLE 162
S + + + + + Y GG AY
Sbjct: 108 DPVTGTSPYSKYSTDLNWSAALSANFTLANINWRHNKGFIQPYLTLGGGAIAYKPTVYNA 167
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ + + + + +G GL + V +++ Y+ + +V+ + S
Sbjct: 168 ATGASTTFKPSDKSNYTEFFIPVGAGLKFNVAPGVNIDLGYQVNFVNADNVDGYSTGSTN 227
Query: 223 ERVDRK 228
++
Sbjct: 228 DKFSYG 233
>gi|149365880|ref|ZP_01887915.1| putative exported protein [Yersinia pestis CA88-4125]
gi|165927425|ref|ZP_02223257.1| outer membrane protein, OmpW family [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165938256|ref|ZP_02226815.1| outer membrane protein, OmpW family [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010622|ref|ZP_02231520.1| outer membrane protein, OmpW family [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166211210|ref|ZP_02237245.1| outer membrane protein, OmpW family [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167400760|ref|ZP_02306266.1| outer membrane protein, OmpW family [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167420162|ref|ZP_02311915.1| outer membrane protein, OmpW family [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425017|ref|ZP_02316770.1| outer membrane protein, OmpW family [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468894|ref|ZP_02333598.1| outer membrane protein W [Yersinia pestis FV-1]
gi|218929297|ref|YP_002347172.1| outer membrane protein W [Yersinia pestis CO92]
gi|229897627|ref|ZP_04512783.1| outer membrane protein W [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229898272|ref|ZP_04513419.1| outer membrane protein W [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902131|ref|ZP_04517252.1| outer membrane protein W [Yersinia pestis Nepal516]
gi|270490607|ref|ZP_06207681.1| outer membrane protein W [Yersinia pestis KIM D27]
gi|294503759|ref|YP_003567821.1| hypothetical protein YPZ3_1649 [Yersinia pestis Z176003]
gi|115347908|emb|CAL20830.1| putative exported protein [Yersinia pestis CO92]
gi|149292293|gb|EDM42367.1| putative exported protein [Yersinia pestis CA88-4125]
gi|165913917|gb|EDR32535.1| outer membrane protein, OmpW family [Yersinia pestis biovar
Orientalis str. IP275]
gi|165920691|gb|EDR37939.1| outer membrane protein, OmpW family [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990324|gb|EDR42625.1| outer membrane protein, OmpW family [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166208390|gb|EDR52870.1| outer membrane protein, OmpW family [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166961857|gb|EDR57878.1| outer membrane protein, OmpW family [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049613|gb|EDR61021.1| outer membrane protein, OmpW family [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167056204|gb|EDR65982.1| outer membrane protein, OmpW family [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229681027|gb|EEO77122.1| outer membrane protein W [Yersinia pestis Nepal516]
gi|229688562|gb|EEO80631.1| outer membrane protein W [Yersinia pestis biovar Orientalis str.
India 195]
gi|229693964|gb|EEO84013.1| outer membrane protein W [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|262362121|gb|ACY58842.1| hypothetical protein YPD4_1935 [Yersinia pestis D106004]
gi|262365450|gb|ACY62007.1| hypothetical protein YPD8_1322 [Yersinia pestis D182038]
gi|270339111|gb|EFA49888.1| outer membrane protein W [Yersinia pestis KIM D27]
gi|294354218|gb|ADE64559.1| hypothetical protein YPZ3_1649 [Yersinia pestis Z176003]
gi|320014865|gb|ADV98436.1| outer membrane protein W [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 211
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 30/102 (29%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D SD D V G+DYMV+ + L+
Sbjct: 114 DKLRPYLGIGLNYTKFFDEKFNATGSDIGLTNLSVKDSW--GVAGQAGMDYMVSENWMLN 171
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ N + ++ + + G F
Sbjct: 172 MSVWWMNIESDV--KFNLAGEEHSINTRLAPWVFMFGAGYRF 211
>gi|323344313|ref|ZP_08084539.1| hypothetical protein HMPREF0663_11075 [Prevotella oralis ATCC
33269]
gi|323095042|gb|EFZ37617.1| hypothetical protein HMPREF0663_11075 [Prevotella oralis ATCC
33269]
Length = 433
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 30/209 (14%)
Query: 55 SGNYVGLHI-SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
SG G++ + H + +N +Y++L + G ++QL +F +
Sbjct: 40 SGFNRGMNGLGLGFREHNQVNYLNPASYSALDSLSFIFDTGLSLQLTNF--------SEN 91
Query: 114 KDDSTFYRLKEKYFIYGDVVLK-AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+Y + G + G S ++ + G+ A S +
Sbjct: 92 GKKVNANNADFEYVVAGFRAARHVGVSFG-IIPFTNVGYNYANTQYVGGSAAASSTTYTN 150
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY--------IPHHIHSVNNSNAKSDVER 224
DG V LG G + + + ++ASY + + +VN + +
Sbjct: 151 TYAGDGGLHQVYLGAGWEPFKGFSVGVNASYLWGTINRSVINSYSDANVNTLSKYYNSST 210
Query: 225 VDRKGNAHI-----------ASLGINMHF 242
K N + +LG+ F
Sbjct: 211 RSYKVNFGMQYTAQVSKKDAVTLGVTYDF 239
>gi|159043489|ref|YP_001532283.1| hypothetical protein Dshi_0937 [Dinoroseobacter shibae DFL 12]
gi|157911249|gb|ABV92682.1| hypothetical protein Dshi_0937 [Dinoroseobacter shibae DFL 12]
Length = 303
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 22/77 (28%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
S + G F + + DY + + L YRYI + N + S V
Sbjct: 237 SGTAFVDYGGFRSDSETWQALLTADYALTPNWVLRGGYRYISVDHDTAENGFSFSQSGVV 296
Query: 226 DRKGNAHIASLGINMHF 242
G F
Sbjct: 297 ----------FGAAYRF 303
>gi|327479052|gb|AEA82362.1| outer membrane protein H1 precursor [Pseudomonas stutzeri DSM 4166]
Length = 201
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 5/122 (4%)
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
+ L+ + S ++ G +S + +N R
Sbjct: 83 NVSDDYGSSLKLRQQNLIGSYDMFVPLGDTTRLFGGASAGLTKLENESKGYSR--DTDIG 140
Query: 183 VVLG--IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
++G G+ + + S+ A YRY+ + + + + +D + LG+N
Sbjct: 141 YLVGLQAGILQKLGDNTSVEAGYRYLRSNAGTEVSERGVGKLGSIDVHSSKQAY-LGLNY 199
Query: 241 HF 242
HF
Sbjct: 200 HF 201
>gi|160872905|ref|ZP_02063037.1| hypothetical protein RICGR_0762 [Rickettsiella grylli]
gi|159121704|gb|EDP47042.1| hypothetical protein RICGR_0762 [Rickettsiella grylli]
Length = 212
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 53/201 (26%), Gaps = 29/201 (14%)
Query: 55 SGNYVGLHISRLYET------HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC 108
+G Y GL + + L + + L L Q + + + I
Sbjct: 27 AGFYAGLQLGYANTSINTMHLLTLNNGTSPVPLPELNQWAFAYRLSFGYQFDQY-WAIEG 85
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY-------GMGGFGGAYVIDSSL 161
F E +V S++ G + +
Sbjct: 86 GYRHVNPTDIFVSTPEYTVNASSQSSAFDLTVKSIVPITCKLSVNAKLGIAYLHPH--AH 143
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
V + G + G+G+ Y + ++ + S+ N
Sbjct: 144 GSVSVIAPYSGTGHTYSNTLEPTFGLGMSYTLKPNVPVEFSW-------------NRIQK 190
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + ++ SLG+ +F
Sbjct: 191 MGGDNHAPSSDFYSLGVAYYF 211
>gi|68160480|gb|AAY86764.1| outer membrane protein W [Vibrio alginolyticus]
Length = 214
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G Y G D + D + IG+DYM+N
Sbjct: 112 FGEPQSKFRPYIGAGLNYTMFFDEGFNSTGKGAGLSDLKLDDS--FGLAANIGVDYMIND 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+A+ Y + + ++ D K N + + F
Sbjct: 170 QWFLNAAAWYANIETEATYKAGGV--KQKTDVKINPWVFMISGGYKF 214
>gi|134302319|ref|YP_001122288.1| ompA family protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134050096|gb|ABO47167.1| ompA family protein [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 393
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 75 GQWYLGVDANGLARTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 134
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 135 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 186
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 187 PSNISGANGRAGTNMIGAGLTWFF 210
>gi|90577703|ref|ZP_01233514.1| hypothetical protein VAS14_11669 [Vibrio angustum S14]
gi|90440789|gb|EAS65969.1| hypothetical protein VAS14_11669 [Vibrio angustum S14]
Length = 221
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Query: 60 GLHISRLYETHPLADT------INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
G H+ + ++ +S+ G++ G L+ + FG +
Sbjct: 135 GAHLGYQWYGKSKETGQYASKDAEKENKDSMNGMIYGLQTGIEYNLDQWTFGTELGYSWK 194
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSV 140
++ K K G + Y
Sbjct: 195 DQNNLDGANKVKNSGEGTFLTSVSYRF 221
>gi|312881216|ref|ZP_07741014.1| outer membrane protein A [Vibrio caribbenthicus ATCC BAA-2122]
gi|309371108|gb|EFP98562.1| outer membrane protein A [Vibrio caribbenthicus ATCC BAA-2122]
Length = 343
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 29/100 (29%), Gaps = 4/100 (4%)
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L + G YV S S + + + S +G L Y ++
Sbjct: 17 FLFFSHGSIAQIYVTPSLGLSHFSGGCSSQRIECEKSSS--AVGAVLGYQAFPHWAVELG 74
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y++ + + S VD G++ F
Sbjct: 75 YQH--YGTVNAKYPAIGSPNHSVDYSAEIQGIEFGLSRKF 112
>gi|269959718|ref|ZP_06174097.1| 47 kDa outer membrane protein [Vibrio harveyi 1DA3]
gi|269835472|gb|EEZ89552.1| 47 kDa outer membrane protein [Vibrio harveyi 1DA3]
Length = 413
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 33/97 (34%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y GG + + D G+ Y + +++ A + +
Sbjct: 316 YSFGGTYTLNNQWTLRAGIAYDEQAGEATLSIPDSDRFWYSAGVTYAMKENLTFDAGFAF 375
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S +NA D +G A+I+++ +N F
Sbjct: 376 VKSKSGSFTETNAADQEITFDSEGTAYISAVQVNYTF 412
>gi|237727773|ref|ZP_04558254.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229434629|gb|EEO44706.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 523
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 54/179 (30%), Gaps = 13/179 (7%)
Query: 66 LYETHPLADTINRKTYNS-LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
+ H R++YN+ L N L E +N L DF+ Y
Sbjct: 308 GFAVHTPTWYDLRESYNAALSSNILACEAPYNQTLSDFLVTPEYDY-------LTYDYNL 360
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
+V G + + G + S L+ V+ + +
Sbjct: 361 TTPWKFNVSA--GTTFAGAVAVG-AEYEYQDYSSSKLKDVDGYELGDQPSVENYLKGVHT 417
Query: 185 LGIGLDYMVNYDISLSASYRY--IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
IG++ + + S+ A Y Y + + + S + + + + G+
Sbjct: 418 FRIGMETRIIPEFSIRAGYNYSSAAFSKDAYSALSLYSTRTDFNNTESKNTFTFGLGYR 476
>gi|220907886|ref|YP_002483197.1| hypothetical protein Cyan7425_2479 [Cyanothece sp. PCC 7425]
gi|219864497|gb|ACL44836.1| hypothetical protein Cyan7425_2479 [Cyanothece sp. PCC 7425]
Length = 445
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 16/151 (10%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
T LA + + + P G+ L FV L
Sbjct: 293 WTVDLAGSYRFYNRSKVNPAGVS----SEFDLGPFVIDA---IGGVNLTGVSAELDVSTD 345
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
+ G+ G ++ S L+ GA ++ K+ + G G + +
Sbjct: 346 LGGEGSFDRGRTIASPLL-------GARFRWNASSKLALLGLASVSGFGIGGLTRYGVQG 398
Query: 188 GLDYMVNYDISLSASYR--YIPHHIHSVNNS 216
G+D+ +ISL YR Y+ + S + +
Sbjct: 399 GVDWRFYRNISLGLGYRFSYLDYSGDSNDFN 429
>gi|91206085|ref|YP_538440.1| hypothetical protein RBE_1270 [Rickettsia bellii RML369-C]
gi|157826611|ref|YP_001495675.1| hypothetical protein A1I_01210 [Rickettsia bellii OSU 85-389]
gi|91069629|gb|ABE05351.1| unknown [Rickettsia bellii RML369-C]
gi|157801915|gb|ABV78638.1| hypothetical protein A1I_01210 [Rickettsia bellii OSU 85-389]
Length = 249
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 34/243 (13%), Positives = 67/243 (27%), Gaps = 12/243 (4%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L +I+ A + D+ + + + Y+ L +
Sbjct: 6 LITAASTAILSSAAIFAATDPCEGVVMNAPMTDSAMNSSMPASAMENQWYLKLDAGAVIF 65
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLE---DFVFGINCH--TTAAKDDSTFYRLK 123
D + S I G+ I DF G+ + +D R+
Sbjct: 66 DSQ-KDKVTGIKVKSNTGFTGEIGAGYYIMDNLRTDFTVGLVTSNHLKKSANDKYGDRVS 124
Query: 124 EKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF-DG 178
K+ L GY ++ ++ G G A V + + +N K +
Sbjct: 125 VKHRPNIVSFLLNGYVDVVDLNMFKVFAGAGIGAAMVKEKISYTFPDPDIENGKVNIKNK 184
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV-DRKGNAHIASLG 237
+ L +G + V + Y + + SD R + + G
Sbjct: 185 TNFAYQLSLGASFEVAQGVKAELVYSWRDYGKTKTKTITEGSDSTRYGGTRYRGNNLMAG 244
Query: 238 INM 240
+
Sbjct: 245 LRF 247
>gi|2642267|gb|AAC45988.1| opacity protein [Neisseria meningitidis]
Length = 238
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 30/123 (24%), Gaps = 33/123 (26%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--------------------H 179
D Y +V S ++ N G +
Sbjct: 129 FDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIR 188
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 189 RLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 235
Query: 240 MHF 242
F
Sbjct: 236 YRF 238
>gi|320353697|ref|YP_004195036.1| outer membrane autotransporter barrel domain-containing protein
[Desulfobulbus propionicus DSM 2032]
gi|320122199|gb|ADW17745.1| outer membrane autotransporter barrel domain protein [Desulfobulbus
propionicus DSM 2032]
Length = 1076
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 54/184 (29%), Gaps = 11/184 (5%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL---Y 67
++ ++ + D + A + D G +G + +
Sbjct: 840 LILGMAGALGESRYESDSSADEGENKSLHAYLYGSWNDPLTP--GGWRLGAALGTGLIDF 897
Query: 68 ETHPLADTINRKTYNSLLPNGLG--IELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK 125
+ R T++ G ++ G++ + +++ G + + D ++
Sbjct: 898 DADRSLAFAGRATHSDHEGRLFGATVQGGYDWVIGNWILGPSVGGGWVRLDEEGFQESGA 957
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGG-AYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
+ +A DSLL + +LE + + R S +
Sbjct: 958 DSADLSLGSRAS---DSLLGFAGARIAYPFQWKTFALEPELRLHWWHEFNRHSDDLQSQL 1014
Query: 185 LGIG 188
G G
Sbjct: 1015 AGGG 1018
>gi|217331213|gb|ACK38250.1| OmpW [Vibrio cholerae]
Length = 179
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S ++N+ + D + +G DYM+N
Sbjct: 75 FGEANSTFRPYVGAGLNYTTFFDESFNSTGTNNALSDLKLDDSW--GLAANVGFDYMLND 132
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + A D + D + N + + F
Sbjct: 133 SWFLNASVWYANIETTATYKAGA--DAKSTDVEINPWVFMIAGGYKF 177
>gi|148977585|ref|ZP_01814164.1| hypothetical outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145963236|gb|EDK28503.1| hypothetical outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 251
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 17/151 (11%), Positives = 47/151 (31%), Gaps = 14/151 (9%)
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G + Q+ V T + + + + + G+++ + Y +
Sbjct: 114 GGVSYQVITLVGMFEA-TAGSDLGFRHNGIYAEAAWRLPIR-RNGWAITPSIGYA---YN 168
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + ++ ++ FD +G+G V ++ ++ RY
Sbjct: 169 SERLNNHLYGVSSAEAARTNLNEFDADWDGQYFIGLGGYLHVTPNVRVTGGVRYTNLEG- 227
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N+ ++ N +G+ F
Sbjct: 228 --DIENSPILESGINMAAN-----VGVAYVF 251
>gi|299533471|ref|ZP_07046851.1| OmpW [Comamonas testosteroni S44]
gi|298718528|gb|EFI59505.1| OmpW [Comamonas testosteroni S44]
Length = 204
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 12/103 (11%), Positives = 28/103 (27%), Gaps = 12/103 (11%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+ Y G + + + + L +G DY ++ + SL
Sbjct: 114 FGAFKPYVGAGVNYTRFSN--------VDILDGAVTVKKNSFGGALQVGFDYALDKNWSL 165
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + E K + + +G+ F
Sbjct: 166 NFDIKKVYLGTK----ITGAGVFENTKFKVDPWLVGVGVGYRF 204
>gi|293398265|ref|ZP_06642468.1| opacity protein opA59 [Neisseria gonorrhoeae F62]
gi|291611320|gb|EFF40392.1| opacity protein opA59 [Neisseria gonorrhoeae F62]
Length = 188
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+ V ++L A YRY + + H A
Sbjct: 134 SRSSRRLGFGAMAGVGIDVAPGLTLDAGYRYHYWGRLE-------------NTRFKTHEA 180
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 181 SLGVRYRF 188
>gi|183220621|ref|YP_001838617.1| hypothetical protein LEPBI_I1227 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910725|ref|YP_001962280.1| hypothetical protein LBF_1178 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775401|gb|ABZ93702.1| Hypothetical protein LBF_1178 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779043|gb|ABZ97341.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 439
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 26/194 (13%), Positives = 54/194 (27%), Gaps = 20/194 (10%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLE---DFVFGINCHTTAAKDDSTFYRLKE 124
+ A T +N L G E N + +G + A D +T
Sbjct: 171 TKNQSATTRLFYAWNRLTIEIRGTEAKGNFDVSGIQTLTYGGGGS-SFATDSNTNVLFGN 229
Query: 125 KYFIYGDVVLKAGYSVDSLLIY---GMGGFGGAYVIDSSLEKVESDNSKNA-------KG 174
+ + + G+S ++ +GG + + N+
Sbjct: 230 GESKFQKLSSRVGFSPYPHPVFDLQILGGLERIWSKSNHEVDSLGGNTATGINPNRVSYR 289
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH-HIHSVNNSNAKSDVERVDRK---GN 230
+ GIG ++ +L ++ S ++ + D +
Sbjct: 290 ETNNSFKGYSFGIGFEWKFWERFTLQGQVLHLDMKGPSSFRSNEFRLDSSPFRYDHYRLD 349
Query: 231 AHIASLG--INMHF 242
S G +N+ F
Sbjct: 350 YQWKSTGTEVNVKF 363
>gi|34101153|gb|AAQ57521.1| outer surface protein percursor [Wolbachia endosymbiont of
Echinophthirius horridus]
Length = 196
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 14/176 (7%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG- 130
+ + ++ + L + + +++D + + D+ +
Sbjct: 30 ITNATGKEKDSPLKASFIAGGGAFGYKMDDIRVDVEGLYSWLNKDADVVGSTVADNLTAI 89
Query: 131 DVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
++ Y + + Y G G AYV + +KV D + G G +
Sbjct: 90 SGLVNVYYDIAIEDMPITPYVGVGIGAAYVSNPLAKKVTDD-------KASGFGVAYQAK 142
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + N A D + + A G+ +F
Sbjct: 143 AGVSYDVTPEVKLYAGARY--FGSYGANFGKATKDDAGIKVLYSTVGAEAGVAFNF 196
>gi|308095111|ref|ZP_07663166.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|308126331|ref|ZP_05909436.2| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|308085978|gb|EFO35673.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|308110693|gb|EFO48233.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
Length = 373
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 59/192 (30%), Gaps = 23/192 (11%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIEL-GHNIQLEDFVFGINCHTTAAKDDSTFYR 121
+ Y + + ++ GL + L G N + T +
Sbjct: 183 VGYGYSSDVTISEDTDISIDTNYSAGLNLTLSGDNYRWNFAYLNAEYDQT-TVLSNAMAP 241
Query: 122 LKEKYFIYGDVVLKA------------GYSVDSLLIYGMG-----GFGGAYVIDSSLEKV 164
+ + G + LKA Y VD + + G +L K
Sbjct: 242 IPGQGSAVGTIRLKAEDQHIQLFSLGAKYEVDRITVTAEGQTSDISTSWYAATSYNLNKF 301
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + + + GL + V+Y++S++A +++ + NN + +
Sbjct: 302 TPYVVYGQQFDDNEKKTGDSVLTGLRFDVDYNVSVNAEWQHF----KAFNNDSGAFSLPP 357
Query: 225 VDRKGNAHIASL 236
D N + L
Sbjct: 358 ADTNANLYTVML 369
>gi|326318078|ref|YP_004235750.1| OmpA domain-containing protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323374914|gb|ADX47183.1| OmpA domain-containing protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 200
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 27/233 (11%), Positives = 61/233 (26%), Gaps = 40/233 (17%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
F ++ ++ + ++A R Y+G +S
Sbjct: 8 FRLLSCALALACGTVAAHAQASRATGNSFIPATQQ------------GYIG--LSAGQSK 53
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY 129
+ L + + ++ G + G FG+ S + +
Sbjct: 54 YDLRNGTSLFNFDDSD-TGWKLYTGGFFHPN---FGVEFGYLNFGTASRLGGDTKAQGLN 109
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+V +A D ++G G S + + G + G G+
Sbjct: 110 FSLVGRAPIG-DQFDVFGKLGTTYGRTK-------TSGDPGFGVATGNDSGFGLSYGAGV 161
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N + + H D K + + +LG+ +
Sbjct: 162 RWAFNPQWAAVLEWERHRLHF--------------ADGKSDVDMTTLGVQYRY 200
>gi|238751892|ref|ZP_04613378.1| Outer membrane protein W [Yersinia rohdei ATCC 43380]
gi|238709872|gb|EEQ02104.1| Outer membrane protein W [Yersinia rohdei ATCC 43380]
Length = 215
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D + + D V GLDYMV+ + L+
Sbjct: 118 DKLRPYLGIGLNYTTFFDEKFNNTGTAAGLSDLSVKDSW--GVAGQAGLDYMVSENWMLN 175
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ + + + + + + + G F
Sbjct: 176 MSVWWMNIETDVKFKAGGE--EQSIHTRLDPWVFMFGAGYRF 215
>gi|145298280|ref|YP_001141121.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851052|gb|ABO89373.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 333
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 23/171 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G+ Y D + L + G+N + + A
Sbjct: 28 WYTGIGAGWAYGH----DLNDFGKDADKDATALSLFGGYNF---NDYYAAELGYLYAGKA 80
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + + + D ++ GG +V +
Sbjct: 81 GVDGVDFKTQGATLSGLARLPLN-DIFSVFAEGGAYFNHVNGN---------------GN 124
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+G++ + G+GL ++ I + A YRY+ + V ++
Sbjct: 125 SDNGTAPLAGVGLTAKLSDLIDVQARYRYMWNLGDEQKTWETNMSVATLEL 175
>gi|325198874|gb|ADY94330.1| opacity protein [Neisseria meningitidis G2136]
Length = 267
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 213 SHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLK-------------NTRFKTHEV 259
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 260 SLGMRYRF 267
>gi|225848543|ref|YP_002728706.1| toluene transporter [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643621|gb|ACN98671.1| toluene transport protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 406
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 55/174 (31%), Gaps = 23/174 (13%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA----- 113
VG+ ++ + + + +S G+G +LG ++ D G N + +
Sbjct: 162 VGVGLNLAWGSLDMGANAGGGQSSSY---GVGAQLGIGYKVGDLTVGFNYQSPVSMKYKH 218
Query: 114 --KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ K +V GY +L G ++ S +
Sbjct: 219 VFDSNGDGSYEDLKLQQPQEVAAGIGY---RVLPNLKVGLDLRWINWSDAD--------- 266
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ V+ +G +Y VN + L A Y Y I S + N +
Sbjct: 267 -GYKQFKWKDQTVIAVGGEYQVNQALKLRAGYNYGKSPIRSYSGLNGMMPTNNI 319
>gi|91210481|ref|YP_540467.1| outer membrane protein W [Escherichia coli UTI89]
gi|117623472|ref|YP_852385.1| outer membrane protein W [Escherichia coli APEC O1]
gi|237705222|ref|ZP_04535703.1| outer membrane protein W [Escherichia sp. 3_2_53FAA]
gi|91072055|gb|ABE06936.1| outer membrane protein W precursor [Escherichia coli UTI89]
gi|115512596|gb|ABJ00671.1| outer membrane protein W precursor [Escherichia coli APEC O1]
gi|226899979|gb|EEH86238.1| outer membrane protein W [Escherichia sp. 3_2_53FAA]
Length = 238
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D G++ + G+DY++N
Sbjct: 136 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQV--GVDYLINR 193
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + S + + V + S G F
Sbjct: 194 DWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAG--YRF 238
>gi|48376|emb|CAA36210.1| unnamed protein product [Vibrio cholerae]
Length = 216
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S ++N+ + D + +G DYM+N
Sbjct: 114 FGEANSTNRPYVGAGLNYTTFFDESFNSTGTNNALSDLKLDDSW--GLAANVGFDYMLND 171
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+A Y + + A + V+ I + G F
Sbjct: 172 SWFLNAYVWYANIETTATYKAGADAKSTDVEINPWVFIIAGG--YKF 216
>gi|307544048|ref|YP_003896527.1| hypothetical protein HELO_1459 [Halomonas elongata DSM 2581]
gi|307216072|emb|CBV41342.1| outer membrane protein OprG precursor [Halomonas elongata DSM 2581]
Length = 211
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 48/172 (27%), Gaps = 14/172 (8%)
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVV 133
+ I + G G LG+ + V + + +
Sbjct: 51 NAIGVSDVDVDQDRGFGFTLGYRFMDKLGVELLAAEPFEHDIALDGVNSASTKHLPPTLT 110
Query: 134 LK---AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
L+ G + S+ Y G SD + V +G+D
Sbjct: 111 LQYYPLGGTDSSVQPYAGVGVNYTRF---------SDEKVDGGSLELDDSWGVAAQLGVD 161
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ +L+A+ Y+ + S V+ + GI+ F
Sbjct: 162 LLLDDHWALNAAAWYLDIDTDATATIGGSSYDTTVNIDPL--VVMGGISYRF 211
>gi|237654024|ref|YP_002890338.1| outer membrane insertion C-terminal signal [Thauera sp. MZ1T]
gi|237625271|gb|ACR01961.1| outer membrane insertion C-terminal signal [Thauera sp. MZ1T]
Length = 424
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 27/97 (27%), Gaps = 6/97 (6%)
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV------LGI 187
A Y V Y G +D +L+ + + F +G+
Sbjct: 314 ATAAYRVGRWKPYLTGSRSILDPVDRALDVPPALDPAGQLRGFWQTVHGYTRHDQTTIGV 373
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
G+ Y +++L + I S +
Sbjct: 374 GVRYDFADNMALKLQFDRIDAKRSSALLDDRGFVTGP 410
>gi|163637013|gb|ABY27327.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia nigroaenea]
Length = 201
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 35 DNSDYSPLKASFLAGGGAFGYKMDDIRVDVEGVYSYLNKNNVTDARFTPDTIADSVTAIS 94
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 95 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 146
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 147 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGYTVLYSTAGAEAGVAFNF 201
>gi|212694086|ref|ZP_03302214.1| hypothetical protein BACDOR_03612 [Bacteroides dorei DSM 17855]
gi|212663306|gb|EEB23880.1| hypothetical protein BACDOR_03612 [Bacteroides dorei DSM 17855]
Length = 523
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 54/179 (30%), Gaps = 13/179 (7%)
Query: 66 LYETHPLADTINRKTYNS-LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
+ H R++YN+ L N L E +N L DF+ Y
Sbjct: 308 GFAVHTPTWYDLRESYNAALSSNILACEAPYNQTLSDFLVTPEYDY-------LTYDYNL 360
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
+V G + + G + S L+ V+ + +
Sbjct: 361 TTPWKFNVSA--GTTFAGAVAVG-AEYEYQDYSSSKLKDVDGYELGDQPSVENYLKGVHT 417
Query: 185 LGIGLDYMVNYDISLSASYRY--IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
IG++ + + S+ A Y Y + + + S + + + + G+
Sbjct: 418 FRIGMETRIIPEFSIRAGYNYSSAAFSKDAYSALSLYSTRTDFNNTESKNTFTFGLGYR 476
>gi|157962608|ref|YP_001502642.1| outer membrane protein W [Shewanella pealeana ATCC 700345]
gi|157847608|gb|ABV88107.1| OmpW family protein [Shewanella pealeana ATCC 700345]
Length = 215
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 29/107 (27%), Gaps = 5/107 (4%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + L Y G D+ + + +GLDY +N
Sbjct: 114 FGDANSKLRPYIGAGVNFTNFFDNEFTNDLGGALTDLSMSNS---WGLAAQVGLDYQIND 170
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++AS Y N D ++ S+G F
Sbjct: 171 SWLINASVWYAQISTDVKFNLGGAPQKVETDIDPWVYMVSVG--YTF 215
>gi|66866365|gb|AAY57832.1| outer membrane protein J [Moraxella catarrhalis]
gi|73427364|gb|AAZ76265.1| outer membrane protein J [Moraxella catarrhalis]
gi|326569753|gb|EGE19803.1| outer membrane protein J [Moraxella catarrhalis BC8]
Length = 180
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 48/165 (29%), Gaps = 30/165 (18%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG I ++ GI G+N FG+ +
Sbjct: 35 YVGAKIGQVDAKQINGKNT-----------AYGIYAGYNFDQN---FGVEAEFVGSDAKE 80
Query: 118 TFYRLK------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + + YG Y+ + Y G G A +
Sbjct: 81 FNAGVSPVKGDVKSFGAYGTYR----YNFINTPFYAKGKLGIAKTKVDVTSRN------A 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+S+ G+G+ + ++ + ASY Y+ ++++
Sbjct: 131 TTYSNKSDKTSLAGGVGVGFKPLANVGVEASYNYLSEDANAISLG 175
>gi|157145587|ref|YP_001452906.1| outer membrane protein W [Citrobacter koseri ATCC BAA-895]
gi|157082792|gb|ABV12470.1| hypothetical protein CKO_01333 [Citrobacter koseri ATCC BAA-895]
Length = 212
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + L Y G D + + D + +G+DY++N
Sbjct: 110 FGDASSKLRPYIGAGVNYTTFFDEGFNNNGKETGLSDLSLKDSW--GMAGQVGMDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 168 DWLINMSVWYMDIDTTASYKLGGAQQHDSVRLDPWVFMFSAG--YRF 212
>gi|2150096|gb|AAC32721.1| opacity protein [Neisseria meningitidis]
Length = 242
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 188 SHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 234
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 235 SLGMRYHF 242
>gi|2150070|gb|AAC32708.1| opacity protein [Neisseria meningitidis]
gi|2253253|gb|AAC32692.1| opacity protein Opa136 [Neisseria meningitidis]
Length = 245
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H A
Sbjct: 191 SNSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEA 237
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 238 SLGVRYRF 245
>gi|299065167|emb|CBJ36332.1| putative Outer membrane protein, OmpW family [Ralstonia
solanacearum CMR15]
Length = 241
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 39/144 (27%), Gaps = 11/144 (7%)
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVE-- 165
+ + ++ ++ K G + Y G + D +
Sbjct: 98 IEGTDSFARYGQIGSAKQWSPTLLAKWYFGGADSKFRPYVGAGLNYTWFTDEKITNSAFQ 157
Query: 166 ----SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS---VNNSNA 218
+ + + V+ G Y + D L S Y+P + +N
Sbjct: 158 TQVLGNGFPSTSTVSTDSSLNPVVSAGATYAITKDWFLGLSVSYLPLKTTAKIDTTLANG 217
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ V K N + L + F
Sbjct: 218 QHAVTEAKIKINPIVTFLSVGYRF 241
>gi|157964976|ref|YP_001499800.1| putative outer surface protein [Rickettsia massiliae MTU5]
gi|157844752|gb|ABV85253.1| Putative outer surface protein [Rickettsia massiliae MTU5]
Length = 227
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 60/199 (30%), Gaps = 20/199 (10%)
Query: 57 NYVGLHISRL-YETHPLADTINRKTYNSLLPNGLGIELGH--------NIQLEDFVFG-I 106
Y+ + + T + N+ +P LG +G+ ++ L + G +
Sbjct: 32 WYLRIDTGAAMFNEEKDKATGVKLKSNTTVPVDLG--IGYYISENCRADLTLGTIIGGKL 89
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS----VDSLLIYGMGGFGGAYVIDSSLE 162
A T + + +L GY D ++ G G A V +
Sbjct: 90 KKSGAATNAPFTGTNVSASHKPTITRLLINGYVDLTNFDMFDVFAGAGVGPALVKEKITY 149
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ S N K + S L +G + + + +Y +I N
Sbjct: 150 NGITGLSSNTK---NRTNISYKLTLGTSAQIADGVKVELAYSWIDDGRTKSKNVIYPGTS 206
Query: 223 ERVD-RKGNAHIASLGINM 240
+ +H + GI
Sbjct: 207 VPTGGMRYQSHNLTAGIRF 225
>gi|320354994|ref|YP_004196333.1| membrane protein involved in aromatic hydrocarbon degradation
[Desulfobulbus propionicus DSM 2032]
gi|320123496|gb|ADW19042.1| membrane protein involved in aromatic hydrocarbon degradation
[Desulfobulbus propionicus DSM 2032]
Length = 410
Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+++ G+ Y VN D+ L +Y Y SVNN K ++ + AH+ + G+
Sbjct: 351 DSDALLYSAGVRYKVNKDMELGVAYLYDDKESRSVNNGTVKGTID----EAGAHLLTFGL 406
Query: 239 NMHF 242
F
Sbjct: 407 TYAF 410
>gi|158146741|gb|ABW22490.1| outer surface protein precursor [Wolbachia endosymbiont of
Trichogramma ostriniae]
gi|241865321|gb|ACS68803.1| outer surface protein precursor [Wolbachia endosymbiont of
Trichogramma chilonis]
gi|241865325|gb|ACS68805.1| outer surface protein precursor [Wolbachia endosymbiont of
Trichogramma chilonis]
gi|241865329|gb|ACS68807.1| outer surface protein precursor [Wolbachia endosymbiont of
Trichogramma chilonis]
gi|241865333|gb|ACS68809.1| outer surface protein precursor [Wolbachia endosymbiont of
Trichogramma chilonis]
gi|241865337|gb|ACS68811.1| outer surface protein precursor [Wolbachia endosymbiont of
Trichogramma evanescens]
gi|241865341|gb|ACS68813.1| outer surface protein precursor [Wolbachia endosymbiont of
Trichogramma ostriniae]
gi|241865351|gb|ACS68818.1| outer surface protein precursor [Wolbachia endosymbiont of
Trichogramma ostriniae]
Length = 183
Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 17 DNSDYSPLKASFLAGGGAFGYKMDDIRVDVEGVYSYLNKNNVTDAKFTPDTIADSVTAIS 76
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 77 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------IKA 128
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 129 GVSYDVTPEVKLYAGARYFGSYGTNFDKSGGEKDKGGHTVPYSTVGAEAGVAFNF 183
>gi|71066311|ref|YP_265038.1| hypothetical protein Psyc_1756 [Psychrobacter arcticus 273-4]
gi|71039296|gb|AAZ19604.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 720
Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 36/136 (26%), Gaps = 7/136 (5%)
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A ++T + +V GY +G G + S ++
Sbjct: 565 GASIEATRVNDGSQQDGTDHLVGSLGYESGWSWAFGTLSTGTGEIAPQLCYTFLSGTAQT 624
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSAS----YRYIPHHIHSVNNSNAKSDVERVDR 227
+G G + G Y +N + A Y Y S + + +
Sbjct: 625 GRGINKGFRVGAGVNAGCRYQINNQLRAQAELQLPYWYHGSSDDSNVRGHYWQPISTLGL 684
Query: 228 KGNAH---IASLGINM 240
+ + + N
Sbjct: 685 QYDIDKKQALRINANY 700
>gi|256829332|ref|YP_003158060.1| aromatic hydrocarbon degradation membrane protein [Desulfomicrobium
baculatum DSM 4028]
gi|256578508|gb|ACU89644.1| membrane protein involved in aromatic hydrocarbon degradation
[Desulfomicrobium baculatum DSM 4028]
Length = 400
Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ + + LGIG +Y + L A Y Y
Sbjct: 283 NGVNPSGVAVKDWKDAWRLGIGAEYALTPSWDLRAGYVY 321
>gi|194099039|ref|YP_002002120.1| outer membrane preprotein PIIc [Neisseria gonorrhoeae NCCP11945]
gi|193934329|gb|ACF30153.1| outer membrane preprotein PIIc [Neisseria gonorrhoeae NCCP11945]
Length = 233
Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 24/97 (24%), Gaps = 19/97 (19%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y GG + + G+ V ++L A YRY
Sbjct: 156 YPSGGGA------KTSVPSKMPPKPAYHENRSSRRLGFGAMAGVGIDVAPGLTLDAGYRY 209
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 210 HYWGRLE-------------NTRFKTHEASLGMRYRF 233
>gi|152995265|ref|YP_001340100.1| OmpW family protein [Marinomonas sp. MWYL1]
gi|150836189|gb|ABR70165.1| OmpW family protein [Marinomonas sp. MWYL1]
Length = 203
Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 11/107 (10%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D + V +D N + + IG+D
Sbjct: 108 FGQANSKIRPYIGAGLNYTIFFDEKGKGVLADTDVNL-----DNSFGLAAQIGVDVNFAE 162
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +AS Y+ N++ + V D + + F
Sbjct: 163 NWFANASLWYMDI------NTDVHTTVGTFDADIDPITFMASVGYTF 203
>gi|114797966|ref|YP_760644.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114738140|gb|ABI76265.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
Length = 201
Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 25/102 (24%), Gaps = 24/102 (23%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ L Y G+ + S + + G G+ Y ++ ++ L
Sbjct: 124 ERLDAYARAGYAYVDLDASLVTP------GGNVISVEDSADGPAFGAGMSYDLSENLYLK 177
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y Y + LG+ F
Sbjct: 178 GDYTYYSFDNT------------------DTSGVMLGVGYKF 201
>gi|326570030|gb|EGE20076.1| Opa-like protein A [Moraxella catarrhalis BC7]
Length = 216
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 58/202 (28%), Gaps = 26/202 (12%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG------INCH 109
G YV + D G GI G + L + IN
Sbjct: 26 GYYVQADLGYSNLEAKYNDNRPNDNKLEDKGLGYGISFGKDTDLARYALDYTNYGKINSS 85
Query: 110 TTAAKDDSTFYRLKEKYFIYG-DVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVE 165
T +T + + + L A Y D+ Y G + +
Sbjct: 86 YTYQPQTNTNTSIISSGELKAQSLGLSAIYDFDTVSGFTPYAGARVGINQIKSTVSTVTT 145
Query: 166 SDNSKNAKGRFDG-HGSSVVLGIGLDYMVNY--DISLSASYRYIPHHIHSVNNSNAKSDV 222
+ ++++ + + G Y++N ++ Y Y+ K D
Sbjct: 146 TTSAQSTTHSQKQENKVGFGVLAGAQYVINPQLNVDAGVEYNYL-----------GKYDK 194
Query: 223 ERVDRKGNAHI--ASLGINMHF 242
D K AH A +G+ +F
Sbjct: 195 LDTDSKLKAHQYGAKVGLRHNF 216
>gi|293398738|ref|ZP_06642913.1| opacity protein opA52 [Neisseria gonorrhoeae F62]
gi|291610847|gb|EFF39947.1| opacity protein opA52 [Neisseria gonorrhoeae F62]
Length = 214
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 21/84 (25%), Gaps = 13/84 (15%)
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+ E G+ V ++L A YRY
Sbjct: 144 KTSVPSEMPPKPAYHENRSSRRLGFGAMAGVGIDVAPGLTLDAGYRYHYWGRLE------ 197
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 198 -------NTRFKTHEASLGVRYRF 214
>gi|152983391|ref|YP_001354512.1| hypothetical protein mma_2822 [Janthinobacterium sp. Marseille]
gi|151283468|gb|ABR91878.1| Hypothetical protein mma_2822 [Janthinobacterium sp. Marseille]
Length = 195
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 53/192 (27%), Gaps = 31/192 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+GL R T + +G + +G+ Q+ + +
Sbjct: 28 FYLGLDAGSGKVKKDPLTPNYRITSETDRVDGGRLYIGY--QITPKLSVELGAVRPSDYK 85
Query: 117 STFYRLKEKYFIYGDVV---LKAGYSVDSLLI--YGMGGFGGAYVIDSSLEKVESDNSKN 171
+ Y + L Y V LL + +GG + V+ S+ S
Sbjct: 86 QSATNGVLSYNARVETKNHDLTLFYKVPELLPGLFVLGGVTYSKVVTSAQFTSVLLPSLR 145
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGN 230
G + G G + + ++ Y RY
Sbjct: 146 VSGSTRKTDTDFAWGGGYEARLFGNVDGRIMYARYA-----------------------G 182
Query: 231 AHIASLGINMHF 242
++ ++G+ F
Sbjct: 183 TNLVTVGLKYRF 194
>gi|189024144|ref|YP_001934912.1| outer membrane protein [Brucella abortus S19]
gi|46251210|gb|AAS84576.1| truncated Omp25b [Brucella abortus]
gi|46251225|gb|AAS84583.1| truncated Omp25b [Brucella abortus]
gi|46251227|gb|AAS84584.1| truncated Omp25b [Brucella abortus]
gi|189019716|gb|ACD72438.1| outer membrane protein, putative [Brucella abortus S19]
Length = 68
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 11/34 (32%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
W+G Y+G I + L+D
Sbjct: 29 QEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSD 62
>gi|300723360|ref|YP_003712663.1| putative outer membrane protein W; colicin S4 receptor; transport
protein [Xenorhabdus nematophila ATCC 19061]
gi|297629880|emb|CBJ90498.1| putative outer membrane protein W; colicin S4 receptor; transport
protein [Xenorhabdus nematophila ATCC 19061]
Length = 213
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 32/107 (29%), Gaps = 2/107 (1%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + L Y G + S N V +GLDY ++
Sbjct: 109 FGSAENKLRPYVGIGVNYTTFFSEKFNDNAAVRSVNLNSLDLKDSWGVAGQVGLDYKLDK 168
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+ S ++ V D E + + + G+ F
Sbjct: 169 NWMLNTSLWWMNIET-DVKFKTGNIDHE-YKTRLDPWVFMFGVGYSF 213
>gi|167623057|ref|YP_001673351.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167353079|gb|ABZ75692.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 365
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 51/176 (28%), Gaps = 10/176 (5%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + + P D K+ P + G+ + FG
Sbjct: 28 WYVGGGVG-INNYEPNCDQKTMKSCGKDDPYAWDVFAGYLF---NDYFGAELGYRDLG-R 82
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + K G G ++ + + G + + S+N +
Sbjct: 83 AEWVDYSNKLNDVGAK----GMNLGLVAFWPFAGNWSLSAEAGAFNYLISNNKNYGSEYY 138
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G + G G+ Y + ++ + A Y RY +S+ ++
Sbjct: 139 SDSGVAPYFGAGIGYNITDNLKIQAKYRRYENLDEDKWKTLEMESNYWGLELSYRF 194
>gi|153000017|ref|YP_001365698.1| outer membrane protein W [Shewanella baltica OS185]
gi|160874638|ref|YP_001553954.1| outer membrane protein W [Shewanella baltica OS195]
gi|151364635|gb|ABS07635.1| OmpW family protein [Shewanella baltica OS185]
gi|160860160|gb|ABX48694.1| OmpW family protein [Shewanella baltica OS195]
Length = 214
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 13/175 (7%)
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC-HTTAAKDDSTFYRLKEKYFIYGD 131
D + + LG+ G+ + FG+ T D + K
Sbjct: 48 DDVAGKGEFQISNDTQLGLNFGYMLTDN---FGVELLAATPFSHDVSLGGTKIAETKQLP 104
Query: 132 VVLKAGYSVDS----LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
L A Y + + Y G D+ + +
Sbjct: 105 PTLVAQYYFGNSQSVVRPYIGVGVNYTNFYDNEFTNDLGGALTDLSMT---TSWGLAAQA 161
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+DY V+ + ++AS Y + + V D ++ S+G F
Sbjct: 162 GIDYQVSKNWLVNASVWYAQISSDVKFKLSGDTVVIGTDIDPWVYMVSVG--YTF 214
>gi|2642271|gb|AAC45990.1| opacity protein [Neisseria meningitidis]
Length = 237
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 23/86 (26%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + + ++L YRY
Sbjct: 165 GGTPTIYNQGSTQDAYHESHSIRRLGLGVVAGVGFDITPKLTLDTGYRYHNWGRLE---- 220
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ HF
Sbjct: 221 ---------NTRFKTHEVSLGMRYHF 237
>gi|325132989|gb|EGC55666.1| opacity protein [Neisseria meningitidis M6190]
Length = 188
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 27/124 (21%), Gaps = 34/124 (27%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK---------------------GRFDG 178
D Y +V + +K
Sbjct: 78 FDKFKPYIGARVAYGHVKHQVHSVETETTTVFSKPKGTTVPGIISEKPISKPPYHESNSI 137
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 138 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 184
Query: 239 NMHF 242
F
Sbjct: 185 RYRF 188
>gi|152993095|ref|YP_001358816.1| hypothetical protein SUN_1508 [Sulfurovum sp. NBC37-1]
gi|151424956|dbj|BAF72459.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 417
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 37/134 (27%), Gaps = 19/134 (14%)
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ + + + L+AGY+ S + E +
Sbjct: 303 DFQWEDQNVYAFGYEYAQDNWA---LRAGYNYSSSAVVETINPAMNMFNLLGFPATEEQH 359
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+G Y N S+ +Y Y + + + S ++ V
Sbjct: 360 --------------YTIGG--TYAFNDQFSMDLAYVYAAENTETFDVSALGMGIDSVTTD 403
Query: 229 GNAHIASLGINMHF 242
+ + S+ +N F
Sbjct: 404 HSENSVSIQLNYTF 417
>gi|2367655|gb|AAC46158.1| opacity protein [Neisseria meningitidis]
Length = 240
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 186 SHSTSSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 232
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 233 SLGMRYRF 240
>gi|417407|sp|Q04874|OPAB_NEIGO RecName: Full=Opacity protein opA51; Flags: Precursor
gi|940790|emb|CAA79361.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 234
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 26/89 (29%), Gaps = 13/89 (14%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+Y + E + + + G+ + + ++L YRY
Sbjct: 159 SYGGLNPTVYTEENTQNAHHQSNSIRRVGLGVIAGVGFDITPKLTLDTGYRYHYWGRLE- 217
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 218 ------------NTRFKTHEASLGVRYRF 234
>gi|299138392|ref|ZP_07031571.1| hypothetical protein AciX8DRAFT_2876 [Acidobacterium sp. MP5ACTX8]
gi|298599638|gb|EFI55797.1| hypothetical protein AciX8DRAFT_2876 [Acidobacterium sp. MP5ACTX8]
Length = 198
Score = 36.7 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 45/182 (24%), Gaps = 22/182 (12%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
L + Y G G + G+ D
Sbjct: 32 LQVGATYSVAN-------PDLGVTYIRGFGAYSDFDFLRH---IGVEVDFRQLNDPDDAQ 81
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ Y +V + + +L YG +G S +++
Sbjct: 82 PNRFFQRSY-EVGGRYFWRFGNLKPYGKALYGRGQFS-SPQALIQNQLEAGEPAYPTIAT 139
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ + G+G D+ V I++ Y N + + + G+
Sbjct: 140 NMIDFGVGADFAVQSHINIRVEGEYQRWFSSHYPLGNGLTPT----------MVNFGVAY 189
Query: 241 HF 242
HF
Sbjct: 190 HF 191
>gi|164415201|gb|ABY53035.1| outer surface protein precursor [Wolbachia endosymbiont of
Spodoptera exigua]
gi|167860451|gb|ACA05007.1| outer surface protein precursor [Wolbachia endosymbiont of Chiasmia
cinerearia]
gi|167860455|gb|ACA05009.1| outer surface protein precursor [Wolbachia endosymbiont of Herse
convolvuli]
Length = 183
Score = 36.7 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L ++++ + + ++ I V +
Sbjct: 17 DNSDYSPLKASFLAGGGAFGYKMDNIRVDVEGVYSYLNKNNVTDAKFTPDTIADSVTAIS 76
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 77 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 128
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + + + A G+ +F
Sbjct: 129 GVSYDVTPEVKLYAGARYFGSYGTNFDKSGGEKNKGGHTVPYSTVGAEAGVAFNF 183
>gi|2642257|gb|AAC45983.1| opacity protein [Neisseria meningitidis]
Length = 241
Score = 36.7 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 187 SHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 233
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 234 SLGMRYHF 241
>gi|217331205|gb|ACK38246.1| OmpW [Vibrio cholerae]
Length = 174
Score = 36.7 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 32/106 (30%), Gaps = 4/106 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S + D + G+DYM+N
Sbjct: 73 FGEANSTFRPYVGAGLNYTTFFDESFNGTGRSATLTDLKLDDSW--GLAANAGVDYMLND 130
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
L+AS Y + + A D + D K N + +
Sbjct: 131 SWFLNASVWYANIETTATYKAGA--DAKSTDVKINPWVFMIAGGYK 174
>gi|2642259|gb|AAC45984.1| opacity protein [Neisseria meningitidis]
Length = 241
Score = 36.7 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 187 SHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 233
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 234 SLGMRYHF 241
>gi|2150094|gb|AAC32720.1| opacity protein [Neisseria meningitidis]
gi|2253228|gb|AAC32672.1| opacity protein Opa92 [Neisseria meningitidis]
gi|2253233|gb|AAC32676.1| opacity protein Opa92 [Neisseria meningitidis]
Length = 245
Score = 36.7 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 191 SHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 237
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 238 SLGMRYHF 245
>gi|2150090|gb|AAC32718.1| opacity protein [Neisseria meningitidis]
Length = 245
Score = 36.7 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 191 SHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 237
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 238 SLGMRYHF 245
>gi|2150092|gb|AAC32719.1| opacity protein [Neisseria meningitidis]
gi|2253248|gb|AAC32688.1| opacity protein Opa115 [Neisseria meningitidis]
Length = 245
Score = 36.7 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 191 SHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 237
Query: 235 SLGINMHF 242
SLG+ HF
Sbjct: 238 SLGMRYHF 245
>gi|2367645|gb|AAC46153.1| opacity protein [Neisseria meningitidis]
Length = 235
Score = 36.3 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 26/124 (20%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V +K ++
Sbjct: 125 DKFKPYIGARVAYGHVKHQVHSVETKTTIVTSKPTQGAAQGGPIIQTDPSKPPYHESHSI 184
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H SLG+
Sbjct: 185 SSVGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGM 231
Query: 239 NMHF 242
F
Sbjct: 232 RYRF 235
>gi|254669871|emb|CBA04333.1| Opacity protein and related surface antigens [Neisseria
meningitidis alpha153]
Length = 226
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 23/86 (26%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + + ++L YRY
Sbjct: 154 GGTPTIYNQGSTQNAYHESHSIRRLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE---- 209
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ HF
Sbjct: 210 ---------NTRFKTHEVSLGMRYHF 226
>gi|238801320|gb|ACR56379.1| outer membrane protein W [Vibrio harveyi]
Length = 193
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S Y G D D D + +G+DYM+N
Sbjct: 91 FGDSQSKFRPYVGAGLNYTMFFDEGFNGKAKDVGLTDLKLDDS--FGLAANVGVDYMINE 148
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + N ++ D K N + + F
Sbjct: 149 SWFLNASAWYANIETEATYKFNG--AAQKTDVKINPWVFMISGGYKF 193
>gi|164430383|gb|ABY55521.1| outer surface protein precursor [Wolbachia endosymbiont of Sitobion
miscanthi]
gi|164430391|gb|ABY55525.1| outer surface protein precursor [Wolbachia endosymbiont of Sitobion
miscanthi]
Length = 183
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 17 DNSDYSPLKASFLAGGGAFGYKMDDIRVDVEGVYSYLNKNNVTDAKFTPDTIADSVTAIS 76
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 77 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 128
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 129 GVSYDVTPEVKLYAGARYFGSYGTNFDKSGGEKDKGGHTVPYSTVGAEAGVAFNF 183
>gi|114320076|ref|YP_741759.1| OmpW family protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226470|gb|ABI56269.1| OmpW family protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 217
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G + ++ ++ + + + IG+D V D ++A RYI
Sbjct: 131 YAGVGLNYTNFFDTKTSGPLDGNRLSLDDSWGLGVQIGVDVPVAEDWFVNAEVRYIEIET 190
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLG 237
+ N + D+ V+ A SLG
Sbjct: 191 DAKLNGD---DIGTVEVDPTAIGISLG 214
>gi|262166497|ref|ZP_06034234.1| hypothetical protein VMA_002956 [Vibrio mimicus VM223]
gi|262026213|gb|EEY44881.1| hypothetical protein VMA_002956 [Vibrio mimicus VM223]
Length = 427
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 36/118 (30%), Gaps = 13/118 (11%)
Query: 136 AGYSVDSLLIYGMGGF------GGAYVIDSSLEKVESDNSKNA-----KGRFDGHGSSVV 184
AGYS S Y M G D L V G H
Sbjct: 312 AGYSFGSFTPYTMYGKFVPKNEAYQAQSDWGLAPVNGTQLAQFQKVLIGGINSTHIDQST 371
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+GL + + ++L A Y Y+ +E + + + H+ S +N F
Sbjct: 372 FSLGLRWDITAQMALKAQYDYVEIGD--YGYGLWAVPMESISQGRDVHVLSFSVNFVF 427
>gi|300778155|ref|ZP_07088013.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
gi|300503665|gb|EFK34805.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
Length = 286
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ + LG+GL Y + +I ++A Y NS K D R + N + LG+
Sbjct: 233 NRFNFGLGLGLGYDITPNIGINARY----------VNSLTKIDKSRPAAENNNRVFQLGL 282
Query: 239 NMHF 242
N F
Sbjct: 283 NYKF 286
>gi|218558185|ref|YP_002391098.1| outer membrane protein W [Escherichia coli S88]
gi|218689202|ref|YP_002397414.1| outer membrane protein W [Escherichia coli ED1a]
gi|218364954|emb|CAR02651.1| outer membrane protein W [Escherichia coli S88]
gi|218426766|emb|CAR07609.1| outer membrane protein W [Escherichia coli ED1a]
gi|294489587|gb|ADE88343.1| outer membrane protein W [Escherichia coli IHE3034]
gi|307627223|gb|ADN71527.1| outer membrane protein W [Escherichia coli UM146]
gi|323949627|gb|EGB45513.1| OmpW family protein [Escherichia coli H252]
gi|323953890|gb|EGB49689.1| OmpW family protein [Escherichia coli H263]
Length = 212
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + S + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAG--YRF 212
>gi|156976699|ref|YP_001447605.1| hypothetical protein VIBHAR_05474 [Vibrio harveyi ATCC BAA-1116]
gi|156528293|gb|ABU73378.1| hypothetical protein VIBHAR_05474 [Vibrio harveyi ATCC BAA-1116]
Length = 205
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 56/205 (27%), Gaps = 37/205 (18%)
Query: 55 SGNYVGLHISRLYETHPL-----------ADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
SG Y+G I + + + + G+ Q+ V
Sbjct: 21 SGFYLGAGIGNTDFDDAGYMNDVSHAIARHSGASVPLTSDSDGSAYKLIAGY--QINRIV 78
Query: 104 FGINCHTT-AAKDDSTFYRLKE--KYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDS 159
I T A D + V GY+ D+ L + G G
Sbjct: 79 -AIEAQYTKYADTDVKVQNVSALKLSHDTFTVAANVGYTFDNGLRPFATLGLGSISYEVK 137
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM--VNYDISLSASYRYIPHHIHSVNNSN 217
+N + G +V LG+GL+Y + ++ A Y + + +
Sbjct: 138 -------ENVTGNNFKDSESGGTVRLGVGLEYAPVMLGGLAFRAGYEVDHYTLETAFK-- 188
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
D + +G F
Sbjct: 189 --------DYDQSVGSWYVGSTYKF 205
>gi|15801482|ref|NP_287499.1| outer membrane protein W [Escherichia coli O157:H7 EDL933]
gi|15831010|ref|NP_309783.1| outer membrane protein W [Escherichia coli O157:H7 str. Sakai]
gi|168759070|ref|ZP_02784077.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4401]
gi|168771720|ref|ZP_02796727.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4486]
gi|168784167|ref|ZP_02809174.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4076]
gi|187730073|ref|YP_001880035.1| outer membrane protein W [Shigella boydii CDC 3083-94]
gi|193064809|ref|ZP_03045886.1| outer membrane protein W [Escherichia coli E22]
gi|195939143|ref|ZP_03084525.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4024]
gi|208807315|ref|ZP_03249652.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4206]
gi|208815245|ref|ZP_03256424.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4045]
gi|208822664|ref|ZP_03262983.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4042]
gi|209397338|ref|YP_002270187.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4115]
gi|217328169|ref|ZP_03444251.1| outer membrane protein W [Escherichia coli O157:H7 str. TW14588]
gi|218694771|ref|YP_002402438.1| outer membrane protein W [Escherichia coli 55989]
gi|254792726|ref|YP_003077563.1| outer membrane protein W [Escherichia coli O157:H7 str. TW14359]
gi|260843547|ref|YP_003221325.1| outer membrane protein W [Escherichia coli O103:H2 str. 12009]
gi|260854915|ref|YP_003228806.1| outer membrane protein W [Escherichia coli O26:H11 str. 11368]
gi|260868018|ref|YP_003234420.1| outer membrane protein W [Escherichia coli O111:H- str. 11128]
gi|261224984|ref|ZP_05939265.1| outer membrane protein W [Escherichia coli O157:H7 str. FRIK2000]
gi|291282278|ref|YP_003499096.1| outer membrane protein W [Escherichia coli O55:H7 str. CB9615]
gi|309794349|ref|ZP_07688773.1| outer membrane protein W [Escherichia coli MS 145-7]
gi|12514981|gb|AAG56111.1|AE005343_1 putative outer membrane protein [Escherichia coli O157:H7 str.
EDL933]
gi|13361221|dbj|BAB35179.1| putative outer membrane protein [Escherichia coli O157:H7 str.
Sakai]
gi|163256130|dbj|BAF95610.1| outer membrane protein W [Escherichia coli O157:H7]
gi|163256132|dbj|BAF95611.1| outer membrane protein W [Escherichia coli O157:H7]
gi|168274270|dbj|BAG09555.1| outer membrane protein W [Escherichia coli]
gi|168274272|dbj|BAG09556.1| outer membrane protein W [Escherichia coli]
gi|187427065|gb|ACD06339.1| outer membrane protein W [Shigella boydii CDC 3083-94]
gi|188998624|gb|EDU67610.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4076]
gi|189354274|gb|EDU72693.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4401]
gi|189359591|gb|EDU78010.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4486]
gi|192927494|gb|EDV82111.1| outer membrane protein W [Escherichia coli E22]
gi|208727116|gb|EDZ76717.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4206]
gi|208731893|gb|EDZ80581.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4045]
gi|208738149|gb|EDZ85832.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4042]
gi|209158738|gb|ACI36171.1| outer membrane protein W [Escherichia coli O157:H7 str. EC4115]
gi|209772138|gb|ACI84381.1| putative outer membrane protein [Escherichia coli]
gi|209772140|gb|ACI84382.1| putative outer membrane protein [Escherichia coli]
gi|209772142|gb|ACI84383.1| putative outer membrane protein [Escherichia coli]
gi|209772144|gb|ACI84384.1| putative outer membrane protein [Escherichia coli]
gi|209772146|gb|ACI84385.1| putative outer membrane protein [Escherichia coli]
gi|217318596|gb|EEC27022.1| outer membrane protein W [Escherichia coli O157:H7 str. TW14588]
gi|218351503|emb|CAU97212.1| outer membrane protein W [Escherichia coli 55989]
gi|254592126|gb|ACT71487.1| outer membrane protein W [Escherichia coli O157:H7 str. TW14359]
gi|257753564|dbj|BAI25066.1| outer membrane protein W [Escherichia coli O26:H11 str. 11368]
gi|257758694|dbj|BAI30191.1| outer membrane protein W [Escherichia coli O103:H2 str. 12009]
gi|257764374|dbj|BAI35869.1| outer membrane protein W [Escherichia coli O111:H- str. 11128]
gi|284921065|emb|CBG34130.1| outer membrane protein W [Escherichia coli 042]
gi|290762151|gb|ADD56112.1| Outer membrane protein W [Escherichia coli O55:H7 str. CB9615]
gi|308122254|gb|EFO59516.1| outer membrane protein W [Escherichia coli MS 145-7]
gi|315615899|gb|EFU96525.1| outer membrane protein W [Escherichia coli 3431]
gi|320173161|gb|EFW48375.1| Outer membrane protein W precursor [Shigella dysenteriae CDC
74-1112]
gi|320637405|gb|EFX07212.1| outer membrane protein W [Escherichia coli O157:H7 str. G5101]
gi|320642714|gb|EFX11935.1| outer membrane protein W [Escherichia coli O157:H- str. 493-89]
gi|320648067|gb|EFX16747.1| outer membrane protein W [Escherichia coli O157:H- str. H 2687]
gi|320654038|gb|EFX22112.1| outer membrane protein W [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320659517|gb|EFX27086.1| outer membrane protein W [Escherichia coli O55:H7 str. USDA 5905]
gi|320664653|gb|EFX31804.1| outer membrane protein W [Escherichia coli O157:H7 str. LSU-61]
gi|323153206|gb|EFZ39467.1| outer membrane protein W [Escherichia coli EPECa14]
gi|323178031|gb|EFZ63613.1| outer membrane protein W [Escherichia coli 1180]
gi|323962627|gb|EGB58206.1| OmpW family protein [Escherichia coli H489]
gi|326344476|gb|EGD68227.1| Outer membrane protein W precursor [Escherichia coli O157:H7 str.
1044]
gi|326346344|gb|EGD70081.1| Outer membrane protein W precursor [Escherichia coli O157:H7 str.
1125]
Length = 212
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + S + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAG--YRF 212
>gi|262274238|ref|ZP_06052050.1| outer membrane protein W precursor [Grimontia hollisae CIP 101886]
gi|262222048|gb|EEY73361.1| outer membrane protein W precursor [Grimontia hollisae CIP 101886]
Length = 214
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D D + D + +G+DYM++
Sbjct: 112 FGTKESKIRPYVGAGINYTIFFDEGFNGKAKDVGLSDLKLDDSW--GLAANVGVDYMLDE 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y + + N ++ + + + + + + F
Sbjct: 170 DWFVNGSIWYADINTDATYKFNGI--EQKTNVEIDPWVFMVAMGYTF 214
>gi|150005723|ref|YP_001300467.1| hypothetical protein BVU_3216 [Bacteroides vulgatus ATCC 8482]
gi|254882098|ref|ZP_05254808.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294777202|ref|ZP_06742658.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|319640893|ref|ZP_07995603.1| hypothetical protein HMPREF9011_01200 [Bacteroides sp. 3_1_40A]
gi|149934147|gb|ABR40845.1| hypothetical protein BVU_3216 [Bacteroides vulgatus ATCC 8482]
gi|254834891|gb|EET15200.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294448916|gb|EFG17460.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|317387475|gb|EFV68344.1| hypothetical protein HMPREF9011_01200 [Bacteroides sp. 3_1_40A]
Length = 173
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 28/89 (31%), Gaps = 18/89 (20%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ D ++ + G + V LG G ++ + + +++ +RY
Sbjct: 103 FDMHDLDVDWDGDHVHVDDGGNHNEFRIGVNLGAGAEFALGRNWAMNVEFRY-------- 154
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + + + G F
Sbjct: 155 ----------QLVDDFDQGVINFGAAYRF 173
>gi|2642269|gb|AAC45989.1| opacity protein [Neisseria meningitidis]
Length = 238
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 30/123 (24%), Gaps = 33/123 (26%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG--------------------H 179
D Y +V S ++ N G +
Sbjct: 129 FDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIR 188
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ + G+ + + ++L YRY + + H SLG+
Sbjct: 189 RLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEVSLGMR 235
Query: 240 MHF 242
F
Sbjct: 236 YRF 238
>gi|71908398|ref|YP_285985.1| TonB-dependent receptor [Dechloromonas aromatica RCB]
gi|71848019|gb|AAZ47515.1| TonB-dependent receptor [Dechloromonas aromatica RCB]
Length = 710
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 25/164 (15%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
+ P+ G+ELG+ Q + V D T YR +
Sbjct: 450 FGNLPIVQYARPSAQGLNAEKAEGLELGYRKQFSNTV----------SADMTAYRYRYTK 499
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD-----NSKNAKGRFDGHGS 181
G G ++ ++ G V + + S A G +
Sbjct: 500 LRSGSQSGLIG--CNNAFLFVP--IPGMQVDPARCPGILSGQMVLLQEIQAVNGLAGWST 555
Query: 182 SVVLGIGLDYMVNYDISLSASYRY----IPHHIHSVNNSNAKSD 221
+ L D++V + L SY + + ++N++A+
Sbjct: 556 GLELAA--DWLVTPNWRLQLSYSWSKLNMDEGKDQISNADAEMT 597
>gi|296112593|ref|YP_003626531.1| outer membrane protein J [Moraxella catarrhalis RH4]
gi|66866363|gb|AAY57831.1| outer membrane protein J [Moraxella catarrhalis]
gi|66866373|gb|AAY57836.1| outer membrane protein J [Moraxella catarrhalis]
gi|66866379|gb|AAY57839.1| outer membrane protein J [Moraxella catarrhalis]
gi|66866381|gb|AAY57840.1| outer membrane protein J [Moraxella catarrhalis]
gi|66866383|gb|AAY57841.1| outer membrane protein J [Moraxella catarrhalis]
gi|66866387|gb|AAY57843.1| outer membrane protein J [Moraxella catarrhalis]
gi|295920287|gb|ADG60638.1| outer membrane protein J [Moraxella catarrhalis RH4]
gi|326560854|gb|EGE11219.1| outer membrane protein J [Moraxella catarrhalis 7169]
gi|326563908|gb|EGE14159.1| outer membrane protein J [Moraxella catarrhalis 46P47B1]
gi|326566579|gb|EGE16725.1| outer membrane protein J [Moraxella catarrhalis 12P80B1]
gi|326566916|gb|EGE17055.1| outer membrane protein J [Moraxella catarrhalis 103P14B1]
gi|326570784|gb|EGE20809.1| outer membrane protein J [Moraxella catarrhalis BC1]
gi|326575080|gb|EGE25008.1| outer membrane protein J [Moraxella catarrhalis CO72]
gi|326576834|gb|EGE26741.1| outer membrane protein J [Moraxella catarrhalis 101P30B1]
gi|326577712|gb|EGE27588.1| outer membrane protein J [Moraxella catarrhalis O35E]
Length = 180
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 48/165 (29%), Gaps = 30/165 (18%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG I ++ GI G+N FG+ +
Sbjct: 35 YVGAKIGQVDAKQINGKNT-----------AYGIYAGYNFDQN---FGVEAEFVGSDAKE 80
Query: 118 TFYRLK------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + + YG Y+ + Y G G A +
Sbjct: 81 FNAGMSPVKGDVKSFGAYGTYR----YNFINTPFYAKGKLGIAKTKVDVTSRN------A 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+S+ G+G+ + ++ + ASY Y+ ++++
Sbjct: 131 TTYSNKSDKTSLAGGVGVGFKPLANVGVEASYNYLSEDANAISLG 175
>gi|332663467|ref|YP_004446255.1| hypothetical protein Halhy_1489 [Haliscomenobacter hydrossis DSM
1100]
gi|332332281|gb|AEE49382.1| hypothetical protein Halhy_1489 [Haliscomenobacter hydrossis DSM
1100]
Length = 165
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 36/125 (28%), Gaps = 10/125 (8%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGM 148
G+ Q+ + FGI + + ++ ++ + L IYG+
Sbjct: 40 GLFARGEFQIPNKDFGIVASANYYFPKEDKNLGVSQNRMALNLDGMYTFAGNDFLDIYGL 99
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
GG E + +G G+ Y + ++ A RY+
Sbjct: 100 GGLNVLLASTKISGFDE---------KTSSTKFGFGVGGGIRYKLESNLIPMAEMRYVNG 150
Query: 209 HIHSV 213
Sbjct: 151 GQDEF 155
>gi|298292782|ref|YP_003694721.1| OmpW family protein [Starkeya novella DSM 506]
gi|296929293|gb|ADH90102.1| OmpW family protein [Starkeya novella DSM 506]
Length = 240
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 44/135 (32%), Gaps = 11/135 (8%)
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ S+ ++ + + + + L+ ++ + Y G + D + +S
Sbjct: 116 DIDGSGTISSLNKIGDVWALPPTLTLQYHFTNFGAFKPYIGAGINYTFFFDQNASAADSL 175
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ K+ L G DYM + ++ + + + + V
Sbjct: 176 DVKDT--------FGWALQAGFDYMFDQHWGINVDVKKL-FLEPDFDAVVGGTPVSGT-A 225
Query: 228 KGNAHIASLGINMHF 242
K + + +G+ F
Sbjct: 226 KLSPWLVGVGVTYRF 240
>gi|270297540|emb|CAT19363.1| putative surface protein [Wolbachia sp. group A]
Length = 201
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 35 DNSDYSPLKASFLAGGGAFGYKMDDIRVDVEGVYSYLNKNNVTDARFTPDTIADSVTAIS 94
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 95 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 146
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 147 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 201
>gi|238763139|ref|ZP_04624105.1| Outer membrane protein W [Yersinia kristensenii ATCC 33638]
gi|238698638|gb|EEP91389.1| Outer membrane protein W [Yersinia kristensenii ATCC 33638]
Length = 215
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 4/102 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L Y G D + D V GLDYMV+ + ++
Sbjct: 118 DKLRPYLGIGLNYTTFFDEKFNNTGTSAGLTDLSVKDSW--GVAGQAGLDYMVSENWMVN 175
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S ++ + + + + + + + G F
Sbjct: 176 MSVWWMNIETDVKFKAAGQ--EQSIHTRLDPWVFMFGAGYRF 215
>gi|269118774|ref|YP_003306951.1| outer membrane autotransporter barrel domain protein [Sebaldella
termitidis ATCC 33386]
gi|268612652|gb|ACZ07020.1| outer membrane autotransporter barrel domain protein [Sebaldella
termitidis ATCC 33386]
Length = 910
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 5/179 (2%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDSTFYRL 122
+ A + Y + G +LG + + ++ + G T AK D Y
Sbjct: 634 GVWFNALGGAGQLYESGYAKADTHFYGGQLGVDKNITDNIILGAAAAFTEAKADFDRYAG 693
Query: 123 KEKYFIYG-DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
K K G + K ++ D++ + G G + + K + D S
Sbjct: 694 KAKSQNVGISLYGKYTFAGDNMYMLGRVGAAYITSDVDRDVVIGNYAEKLSADHDDYAFS 753
Query: 182 SVVLGIGLDYMVNYDISL--SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+G +MV +I L A Y S + ++ ++ + N +G+
Sbjct: 754 GY-GELGYKFMVTENIGLTPFAGLMYESVRRGSFSEDDSLFGLKADSKTYNQSSGLVGV 811
>gi|257126961|ref|YP_003165075.1| outer membrane autotransporter barrel domain protein [Leptotrichia
buccalis C-1013-b]
gi|257050900|gb|ACV40084.1| outer membrane autotransporter barrel domain protein [Leptotrichia
buccalis C-1013-b]
Length = 965
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 40/134 (29%), Gaps = 2/134 (1%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDS 117
VG + + + + Y G ++G + Q + + G + A
Sbjct: 680 VGDNFGLWVSSFGANGKLEQNGYGKGDTKVFGGQVGIDKQFGDNLILGTALSYSKADVKF 739
Query: 118 TFYRLKEKYFIYG-DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
Y K +G + + G + G G G + S++ AK
Sbjct: 740 NRYGGKSDASNFGVSLYGRLGNKDIPWYLQGRFGVGFVDSDVERDIILSSNDYSRAKINH 799
Query: 177 DGHGSSVVLGIGLD 190
+ S + G D
Sbjct: 800 NDKVYSGYVETGYD 813
>gi|170750728|ref|YP_001756988.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170657250|gb|ACB26305.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 330
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 52/199 (26%), Gaps = 15/199 (7%)
Query: 55 SGNY---VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN--IQLEDFVFGINCH 109
+G Y GL S Y+ + + N N + N L + +GI
Sbjct: 108 TGEYRYSTGLRGSEYYKGPDFDNGLGSYGVNKSSGNFDSAVVLANAYFDLGTW-YGI-TP 165
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
F + GY + + G + +
Sbjct: 166 FIGGGVGYAFNHVSSYSTNQQFTSPTYGYDYANPIYGCGCGQPSYNYAPVYDANGNAVYN 225
Query: 170 KNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
N+ +F +S L GL Y V + + +YRY+ +
Sbjct: 226 TNSGSKFYKDKTSGSLAWALHAGLAYNVTDALKIELAYRYLNLGKAETGPGFVPCCTGSL 285
Query: 226 DR----KGNAHIASLGINM 240
AH +G+
Sbjct: 286 QAIKIKDIEAHDVKIGLRY 304
>gi|71803681|ref|YP_132225.2| hypothetical protein PBPRB0552 [Photobacterium profundum SS9]
Length = 200
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 49/163 (30%), Gaps = 19/163 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN---SLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
YVGL I + + + G +G N FV I A
Sbjct: 29 GYVGLEIGKQESSALKSLNNKYCQSGECVDEDTFSFGGLVGFN--FNKFV-AIEGAAQFA 85
Query: 114 KDDSTFYRLKEKYFIY------GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
K D FY + I GDV + YS+ L Y + +V S
Sbjct: 86 KYDYDFYTARYNSSIPSLYRHKGDVKVTT-YSLGPKLQYPVNDIISFFVKPSIAYTKT-- 142
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ A D LG ++ + +L ASY +
Sbjct: 143 --EAAGESEDSADFMYTLGA--EFSLTSYAALRASYESVDTDS 181
>gi|66866367|gb|AAY57833.1| outer membrane protein J [Moraxella catarrhalis]
Length = 180
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 48/165 (29%), Gaps = 30/165 (18%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG I ++ GI G+N FG+ +
Sbjct: 35 YVGAKIGQVDAKQINGKNT-----------AYGIYAGYNFDQN---FGVEAEFVGSDAKE 80
Query: 118 TFYRLK------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + + YG Y+ + Y G G A +
Sbjct: 81 FNAGMSPVKGDVKSFGAYGTYR----YNFINTPFYAKGKLGIAKTKVDVTSRN------A 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+S+ G+G+ + ++ + ASY Y+ ++++
Sbjct: 131 TTYSNKSDKTSLAGGVGVGFKPLANVGVEASYNYLSEDANAISLG 175
>gi|317503859|ref|ZP_07961868.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315665015|gb|EFV04673.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 159
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 19/139 (13%)
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
G D L+ Y+ GD ++A V+ L Y V ++
Sbjct: 40 LGFGAVARYNIDGHFRPELEANYYPEGDNNIRAW-DVNMNLQYLFPITHRFKVYPTAGLT 98
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + + LG G+ + + + L A V
Sbjct: 99 IVGADFDGIGISTSESRVGLNLGGGVQFNITPKLHLHAE------------------TVY 140
Query: 224 RVDRKGNAHIASLGINMHF 242
++ + + ++G++ F
Sbjct: 141 KIVSDIDRGVLNVGLSYAF 159
>gi|188025783|ref|ZP_02997668.1| hypothetical protein PROSTU_01700 [Providencia stuartii ATCC 25827]
gi|188020484|gb|EDU58524.1| hypothetical protein PROSTU_01700 [Providencia stuartii ATCC 25827]
Length = 40
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ + LG+ + Y VN ++S+ SYRY
Sbjct: 4 SKTKNNFAWRLGLEVQYAVNDNLSMDLSYRY 34
>gi|157375287|ref|YP_001473887.1| outer membrane protein [Shewanella sediminis HAW-EB3]
gi|157317661|gb|ABV36759.1| outer membrane protein [Shewanella sediminis HAW-EB3]
Length = 669
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 48/191 (25%), Gaps = 32/191 (16%)
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQ-LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDV 132
D + G +LG + Q L+D I+ D + D
Sbjct: 489 DDYTNTEIGLVESKDYGYDLGLSWQALQDLSVNIDGGYQWIDSDQASAQTTNLDMWQADT 548
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD-- 190
+ G++ G G Y S S + A D + + +
Sbjct: 549 EDQFGFA----------GIGFNYTGLSDKGINLSADYSYAISISDSYSNGYNALGDYEST 598
Query: 191 ---------YMVNYDISLSASY---RYIPHHIHSVNN-------SNAKSDVERVDRKGNA 231
Y + + Y RY + + + ++ +A
Sbjct: 599 SHNVTFQATYAMTEQAIVGLKYQFERYRDSDDTQLPTYYYPGTGPTGLNTLGVLNHDYDA 658
Query: 232 HIASLGINMHF 242
H+ + F
Sbjct: 659 HLILATLQYRF 669
>gi|146280785|ref|YP_001170938.1| outer membrane protein H1 precursor [Pseudomonas stutzeri A1501]
gi|145568990|gb|ABP78096.1| outer membrane protein H1 precursor [Pseudomonas stutzeri A1501]
Length = 154
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 5/122 (4%)
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
+ L+ + S ++ G +S + +N R
Sbjct: 36 NVSDDYGSSLKLRQQNLIGSYDMFVPLGDTTRLFGGASAGLTKLENESKGYSR--DTDIG 93
Query: 183 VVLG--IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
++G G+ + + S+ A YRY+ + + + + +D + LG+N
Sbjct: 94 YLVGLQAGILQKLGDNTSVEAGYRYLRSNAGTEVSERGVGKLGSIDVHSSKQAY-LGLNY 152
Query: 241 HF 242
HF
Sbjct: 153 HF 154
>gi|68299797|ref|NP_776412.1| intestinal-type alkaline phosphatase [Bos taurus]
gi|3510653|gb|AAC33854.1| intestinal alkaline phosphatase IV [Bos taurus]
Length = 530
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
+ D ++ GG+ L ++ ++K+ G+G VLG GL VN IS
Sbjct: 374 TADHSHVFSFGGYTLRGTSIFGLAPSKASDNKSYTSILYGNGPGYVLGGGLRPDVNDSIS 433
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
SYR + + S+ DV R AH+
Sbjct: 434 EDPSYR-QQAAVPLSSESHGGEDVAVFARGPQAHLVH 469
>gi|121604729|ref|YP_982058.1| OmpW family protein [Polaromonas naphthalenivorans CJ2]
gi|120593698|gb|ABM37137.1| OmpW family protein [Polaromonas naphthalenivorans CJ2]
Length = 229
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 27/101 (26%), Gaps = 2/101 (1%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+ G + + + L G+ Y +N SLSA
Sbjct: 131 PWRPFVGVGINYTNFDKTHSTAAGDTLNGGPTSVSLEDSVGLALQGGVTYRINNQWSLSA 190
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I + S +N D K + +L + F
Sbjct: 191 --ALITAQVKSKITTNTLGIERSADIKFRPRVFTLAMGYSF 229
>gi|300936981|ref|ZP_07151857.1| outer membrane protein W [Escherichia coli MS 21-1]
gi|300457924|gb|EFK21417.1| outer membrane protein W [Escherichia coli MS 21-1]
Length = 212
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + S + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAG--YRF 212
>gi|241865345|gb|ACS68815.1| outer surface protein precursor [Wolbachia endosymbiont of
Trichogramma dendrolimi]
Length = 183
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 17 DNSDYSPLKASFLAGGGAFGYKMDDIRVDVEGVYSYLNKNNVTDAKFTPDTIADSVTAIS 76
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 77 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------IKA 128
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 129 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVPYSTVGAEAGVAFNF 183
>gi|535358|gb|AAA74082.1| Opa15063G [Neisseria gonorrhoeae]
Length = 283
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 31/123 (25%), Gaps = 34/123 (27%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V S ++ + ++ +G
Sbjct: 174 DKFKPYIGARVAYGHVRHSIDSTKKTTKILTSFYGVATKPTTYDIGPKTQDAHQESNSIR 233
Query: 187 -------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G+ + + ++L YRY + + H ASLG+
Sbjct: 234 RVGLGVIAGVGFDITPKLTLDTGYRYHYWGRLE-------------NTRFKTHEASLGMR 280
Query: 240 MHF 242
F
Sbjct: 281 YRF 283
>gi|67641879|ref|ZP_00440644.1| outer membrane protein, OmpW family [Burkholderia mallei GB8 horse
4]
gi|167721518|ref|ZP_02404754.1| ompW family protein [Burkholderia pseudomallei DM98]
gi|167740489|ref|ZP_02413263.1| ompW family protein [Burkholderia pseudomallei 14]
gi|167817700|ref|ZP_02449380.1| ompW family protein [Burkholderia pseudomallei 91]
gi|167826096|ref|ZP_02457567.1| ompW family protein [Burkholderia pseudomallei 9]
gi|167847606|ref|ZP_02473114.1| ompW family protein [Burkholderia pseudomallei B7210]
gi|167896179|ref|ZP_02483581.1| ompW family protein [Burkholderia pseudomallei 7894]
gi|167904562|ref|ZP_02491767.1| ompW family protein [Burkholderia pseudomallei NCTC 13177]
gi|167912826|ref|ZP_02499917.1| ompW family protein [Burkholderia pseudomallei 112]
gi|167920786|ref|ZP_02507877.1| ompW family protein [Burkholderia pseudomallei BCC215]
gi|238522891|gb|EEP86333.1| outer membrane protein, OmpW family [Burkholderia mallei GB8 horse
4]
Length = 239
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 49/196 (25%), Gaps = 19/196 (9%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGINCHTTAAKDDST 118
++ H + +T + +G+ G+ + + V GI S
Sbjct: 48 NVGGSPVNHEVPNTGAGID----NADTIGLAAGYFLTDHIATELVAGIPPRFNLNGKGSL 103
Query: 119 FYRLKEKYFIYGDVVLKAGYSVD----SLLIYGMGGFGGAYVID--SSLEKVESDNSKNA 172
+ L Y + Y G + + E
Sbjct: 104 EQFGVLGHAYQWSPALLLKYYFNDAKAKFRPYVGIGASYIWFTGAKITNTAFERGALGGP 163
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ + VL G Y S YIP + + + + + V + A
Sbjct: 164 TSVQTSNQWAPVLNAGFTYNFTDHWFGGLSVSYIPVSLTATLTTQRPTPIGNVTQTSQAK 223
Query: 233 IAS------LGINMHF 242
I L I F
Sbjct: 224 ITLNPIVTYLNIGYRF 239
>gi|330815301|ref|YP_004359006.1| Outer membrane protein, OmpW family protein [Burkholderia gladioli
BSR3]
gi|327367694|gb|AEA59050.1| Outer membrane protein, OmpW family protein [Burkholderia gladioli
BSR3]
Length = 243
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 57/190 (30%), Gaps = 15/190 (7%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTFYRL 122
P+ ++ + LG G+ + +FV+GI + F L
Sbjct: 54 GGTPVNQSVPNTGAGISDSDTLGFTAGYFVTDHIAAEFVYGIPPKFNLDGKGSFEQFGTL 113
Query: 123 KEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKV--ESDNSKNAKGRFDG 178
Y V+LK + + Y G Y + L E
Sbjct: 114 GHAYQWSPAVLLKYYFNSAEAKFRPYVGVGASYIYFTGAKLTNNAFERGVLGGPTNVTTS 173
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS--- 235
+ + V G +Y N S YIP + + + A + V + R AHI
Sbjct: 174 NQWAPVFNAGFNYNFNKHWFAGLSISYIPVSLTATLTTQAATQVGTLTRTSQAHIKLDPI 233
Query: 236 ---LGINMHF 242
+ I F
Sbjct: 234 VSYVNIGYRF 243
>gi|260598155|ref|YP_003210726.1| outer membrane protein W [Cronobacter turicensis z3032]
gi|260217332|emb|CBA31327.1| Outer membrane protein W [Cronobacter turicensis z3032]
Length = 210
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S + Y G D + + D +GLDYMVN
Sbjct: 108 FGDSQSKVRPYIGAGINYTTFFDEDFNDTGKKSGLSDLSVDDSW--GAAGQVGLDYMVNK 165
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ +N + + S G F
Sbjct: 166 DWLINMSVWYMDIDTTVKFKANGQQQNIDTRLDPWVFMFSAG--YRF 210
>gi|217331207|gb|ACK38247.1| OmpW [Vibrio cholerae]
Length = 171
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 2/92 (2%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G D S + D + G+DYM+N
Sbjct: 72 FGEANSTFRPYVGAGLNYTTFFDESFNGTGRSATLTDLKLDDSW--GLAANAGVDYMLND 129
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
L+AS Y + + A + V
Sbjct: 130 SWFLNASVWYANIETTATYKAGADAKSTDVKI 161
>gi|80975699|gb|ABB54458.1| major outer membrane protein W [Photobacterium damselae]
Length = 213
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 29/107 (27%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G Y G D + D + +G DYM+N
Sbjct: 111 FGEPQSKFRPYVGAGLNYTIFFDEGFNSTGKGAGLSDLKLDDS--FGLAANVGADYMIND 168
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + ++ D K N + + F
Sbjct: 169 QWFLNASAWYANIETEATYKAGG--AKQKTDVKINPWVFMISGGYKF 213
>gi|83592649|ref|YP_426401.1| aromatic hydrocarbon degradation protein [Rhodospirillum rubrum
ATCC 11170]
gi|83575563|gb|ABC22114.1| Membrane protein involved in aromatic hydrocarbon degradation
[Rhodospirillum rubrum ATCC 11170]
Length = 429
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 45/143 (31%), Gaps = 8/143 (5%)
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG----FGGAYVIDS 159
+ + S F LK + G + + S + + +GG +
Sbjct: 291 WAVTADVAWTNW-SLFDELKIENDKGGVIT-RVDESWEDTMFVALGGIYKPVEDVALRIG 348
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
K+ R L G+ Y V SL ASY +I S+N + A+
Sbjct: 349 VAYDQAPVGKKHRTARIPDTNRYW-LAAGVSYAVTDSFSLDASYAHIFADRVSINETTAQ 407
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
++ + I S + F
Sbjct: 408 GNLTGT-YDSSIDILSASATLRF 429
>gi|308447004|ref|XP_003087313.1| hypothetical protein CRE_08630 [Caenorhabditis remanei]
gi|308257614|gb|EFP01567.1| hypothetical protein CRE_08630 [Caenorhabditis remanei]
Length = 425
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 28/113 (24%), Gaps = 8/113 (7%)
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
Y D I G +S + + N + LG+G+ Y +
Sbjct: 313 YQKDQFSITVGLGHQFTQKWAASADVSWDSGTGNPASVLNPTKGGWGLGLGVQYNPTDNY 372
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS--------LGINMHF 242
++ +YI + + V L I F
Sbjct: 373 FIAGGIKYIWIGDATAQDGTYYIPVPGASEIAQQGDYRDNNAIGYGLKIGYRF 425
>gi|307557537|gb|ADN52162.1| outer surface protein [Wolbachia endosymbiont of Metaphycus
ericeri]
Length = 184
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 53/176 (30%), Gaps = 18/176 (10%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD----DSTFYRLKEKYFIYGDV 132
++ Y+ L P+ + +++D + + D TF
Sbjct: 17 DKSDYSPLKPSFIAGGGAFGYKMDDIRVDVEGVYSYLNKNDVKDVTFDPANTIADSVTAF 76
Query: 133 VLKAGYSVD------SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D ++ Y GG G AY+ V NSK +
Sbjct: 77 SGLVNVYYDIAIEDMPIIPYIGGGVGAAYISTPLKTAVNGQNSKFGFAGQ--------VK 128
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + + D + A G+ +F
Sbjct: 129 AGVSYDVTPEVKLYAGARYFGSYGANFDKDGGEKDKGGHTVFYSTVGAEAGVAFNF 184
>gi|315266880|gb|ADT93733.1| OmpW family protein [Shewanella baltica OS678]
Length = 213
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 13/175 (7%)
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC-HTTAAKDDSTFYRLKEKYFIYGD 131
D + + LG+ G+ + FG+ T D + K
Sbjct: 47 DDVAGKGEFQISNDTQLGLNFGYMLTDN---FGVELLAATPFSHDVSLGGTKIAETKQLP 103
Query: 132 VVLKAGYSVDS----LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
L A Y + + Y G D+ + +
Sbjct: 104 PTLVAQYYFGNSQSVVRPYIGVGVNYTNFYDNEFTNDLGGALTDLSMT---TSWGLAAQA 160
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+DY V+ + ++AS Y + + V D ++ S+G F
Sbjct: 161 GIDYQVSKNWLVNASVWYAQISSDVKFKLSGDTVVIGTDIDPWVYMVSVG--YTF 213
>gi|291614481|ref|YP_003524638.1| OmpA domain protein transmembrane region-containing protein
[Sideroxydans lithotrophicus ES-1]
gi|291584593|gb|ADE12251.1| OmpA domain protein transmembrane region-containing protein
[Sideroxydans lithotrophicus ES-1]
Length = 203
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 53/193 (27%), Gaps = 20/193 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YV + + ++ + +N+ LG G+N + FG+ T D
Sbjct: 25 GFYVAVDGGAMGYSNSHILSAWGIDFNAGGAITLG--GGYNF---NNYFGLEAGFTNTGD 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSV-----DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + D ++ G + + + ++
Sbjct: 80 STITTYGFYSKETLKSSAAQLAAVGTFPINDRFSMFLKAGVANTRIDYTYWSFGTTASAS 139
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS-DVERVDRKG 229
+K ++G G Y N L Y+ + V A
Sbjct: 140 ASKSHA-------MIGFGGQYNFNRHWGLRVQYQ--DYGKTQVGPVIANGVPQAGTTGDI 190
Query: 230 NAHIASLGINMHF 242
+ S+G +F
Sbjct: 191 GMALFSVGGVYNF 203
>gi|92116694|ref|YP_576423.1| hypothetical protein Nham_1116 [Nitrobacter hamburgensis X14]
gi|91799588|gb|ABE61963.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 290
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 57/231 (24%), Gaps = 46/231 (19%)
Query: 56 GNYVGLHISRL------YETHPLADTINRKTYNSLLPNGLGIEL-GHNIQLEDFVFG--- 105
G Y+ I + S + GI G Q ++ G
Sbjct: 44 GWYLRGDIGFSNQRVKNIAMGDGRNASLTSLNQSTAFDTAGIFGVGLGYQFNNWFRGDIT 103
Query: 106 ----INCHTTAAK--DDSTFYRLKEKYFIYGDVVLKA-----GY----SVDSLLIYGMGG 150
N + + + + Y + GY + + + G
Sbjct: 104 GQYRGNSNFKGTDLITFPAYGLVGQGVDNYNATKSEWLVMANGYVDLGTWWCITPFIGAG 163
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGR-----------------FDGHGSSVVLGIGLDYMV 193
G A V ++ S+N + + GL Y V
Sbjct: 164 VGVARVNIANYTDNGSNNVNYSSATDSYYLGGPNPSYASAPAASKWNFAWAAHAGLAYRV 223
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVD----RKGNAHIASLGINM 240
N +++ +Y Y+ + + R +H LG+
Sbjct: 224 NPGLTIELAYSYVNLGSGTTGAVSTYDGFTRGVAMKFHDITSHDVKLGVRW 274
>gi|305666329|ref|YP_003862616.1| hypothetical protein FB2170_08634 [Maribacter sp. HTCC2170]
gi|88708321|gb|EAR00558.1| hypothetical protein FB2170_08634 [Maribacter sp. HTCC2170]
Length = 223
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 25/197 (12%)
Query: 56 GNYVGLHISR--LYETHPLADTINRKTYNSLLPNGLGIELGHNIQL--EDFVFGINCHTT 111
G YVGL + ++ + D + + G+ IQ + F+ G
Sbjct: 42 GPYVGLTLGAQNIFGGALIDDL---DVLGQKSALVIELSAGYRIQFLNDRFIAGAALQFG 98
Query: 112 AAKDDSTFYR------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
D T + K ++ G ++ + + + V + +
Sbjct: 99 ITDGDLTQTDTRNQMMVDYKNNSQFGYGIQIGVALGKKKAFLL--YAFGNVTKRNFDITI 156
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ S + DG G+G++ + +++A SV+ + +++ + V
Sbjct: 157 METSGFDFTQKDGQRFG-RYGLGVEIPMLKKFNITA-----NVGRVSVDYGDLETN-KDV 209
Query: 226 DRKGNAHIASLGINMHF 242
D K + + LG+ F
Sbjct: 210 DDKTDFN---LGVVYQF 223
>gi|294142661|ref|YP_003558639.1| OmpA family protein [Shewanella violacea DSS12]
gi|293329130|dbj|BAJ03861.1| OmpA family protein [Shewanella violacea DSS12]
Length = 334
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 49/185 (26%), Gaps = 21/185 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC---HTTAA 113
YVG + + + L N L QL + F +
Sbjct: 26 WYVGAGLGQANYEAVNVTGDYLSDDSDLAWNAL-----VGYQLNKY-FAVEAGWQDLGTL 79
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D + + G + G + + G G + +
Sbjct: 80 DDAHMRTDNGQNIEVDGFTLGLVGTLPLNEKWFLTGEAGAYQYHIAHQMTADHY------ 133
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
++ G G+ Y + +++SA YR I + A D + V +
Sbjct: 134 --VSATDTAAYFGAGVGYNITDSLAISAKYR-RFAGIDETEWNTADMDAQTVGVQ---MT 187
Query: 234 ASLGI 238
GI
Sbjct: 188 YRFGI 192
>gi|164430393|gb|ABY55526.1| outer surface protein precursor [Wolbachia endosymbiont of Sitobion
miscanthi]
Length = 183
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 17 DNSDYSPLKASFLAGGGAFGYEMDDIRVDVEGVYSYLNKNNVTDAKFTPDTIADSVTAIS 76
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 77 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 128
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 129 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 183
>gi|299138391|ref|ZP_07031570.1| conserved hypothetical protein [Acidobacterium sp. MP5ACTX8]
gi|298599637|gb|EFI55796.1| conserved hypothetical protein [Acidobacterium sp. MP5ACTX8]
Length = 208
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D + + G GL Y ++ + A YR S R +
Sbjct: 136 DFGTQVQSLKRNTNIGALFGGGLAYEISPSFDIRAEYRGFLLKAPDFGASGGIFKTNRYE 195
Query: 227 RKGNAHIASLGINMHF 242
+ ++GI HF
Sbjct: 196 V---LSMPAIGIAYHF 208
>gi|197285892|ref|YP_002151764.1| toxin [Proteus mirabilis HI4320]
gi|194683379|emb|CAR44095.1| putative toxin [Proteus mirabilis HI4320]
Length = 4620
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 15/122 (12%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G + + +DT +++ G G +LG + + +FG +
Sbjct: 4276 GAYLGDN--NNFWGGRGSDTFYATGISNIFTGGYGNDLGVLMGRSNMMFGGDGD------ 4327
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
D+ + GD +D ++G GG + + + N +
Sbjct: 4328 DTAIIAGRINNVYLGD-------GLDKAFVFGEGGEIHTNAGNDYVVTTGNYNRIFSGSE 4380
Query: 176 FD 177
D
Sbjct: 4381 QD 4382
>gi|149185390|ref|ZP_01863706.1| peptidoglycan-associated protein [Erythrobacter sp. SD-21]
gi|148830610|gb|EDL49045.1| peptidoglycan-associated protein [Erythrobacter sp. SD-21]
Length = 359
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 49/199 (24%), Gaps = 20/199 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLL-----PNGLGIELGHNIQLEDFVFGINCHTT 111
Y+G + D I+ + ++ G +G++ F
Sbjct: 19 WYIGGEFGPMLVEDVDFDLIDETSTDTAQIDFDRGFDGGGYVGYD--FGAFRLEAEVSYR 76
Query: 112 AAKDDSTFYRLKEKYFIYGD-------VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK 163
A ++ G + + D L Y G G A
Sbjct: 77 EADHETVDVGPAGVVPADGSTSSLAFMLNGMFDFGPDDGLQAYAGAGIGVARTSVDGELF 136
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
V N + L G+ + I + YR VN D
Sbjct: 137 V-PGIGNNVVIDDSSSDLAWQLLAGVRAPLTDSIDVGLRYR--MFTAEDVNIVTNFGDEY 193
Query: 224 RVDRKGNAHIASLGINMHF 242
+ K +H + +F
Sbjct: 194 --EGKLRSHSLMGTLAFNF 210
>gi|1808965|gb|AAB41579.1| outer membrane protein [Neisseria meningitidis]
Length = 175
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 47/159 (29%), Gaps = 23/159 (14%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
SG YV + + L I G+ + D F + T K
Sbjct: 23 SGFYVQADAAHAKASSSLGSAKGFSPR---------ISAGYR--INDLRFAV--DYTRYK 69
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ K + G + Y D+ + +S++ SD
Sbjct: 70 NYKQVPSTDFKLYSIGASAI---YDFDTQSPVKPYLGARLSLNRASVDFNGSD------- 119
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
F + + + G+ Y V ++ L A YRY +
Sbjct: 120 SFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNT 158
>gi|265751084|ref|ZP_06087147.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263237980|gb|EEZ23430.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 523
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 54/179 (30%), Gaps = 13/179 (7%)
Query: 66 LYETHPLADTINRKTYNS-LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
+ H R++YN+ L N L E +N L DF+ Y
Sbjct: 308 GFAVHTPTWYDLRESYNAALSSNILACEAPYNQTLSDFLVTPEYDY-------LTYDYNL 360
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
++ G + + G + S L+ V+ + +
Sbjct: 361 TTPWKFNISA--GTTFAGAVAVG-AEYEYQDYSSSKLKDVDGYELGDQPSVENYLKGVHT 417
Query: 185 LGIGLDYMVNYDISLSASYRY--IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
IG++ + + S+ A Y Y + + + S + + + + G+
Sbjct: 418 FRIGMETRIIPEFSIRAGYNYSSAAFSKDAYSALSLYSTRTDFNNTESKNTFTFGLGYR 476
>gi|237710276|ref|ZP_04540757.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229455738|gb|EEO61459.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 523
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 54/179 (30%), Gaps = 13/179 (7%)
Query: 66 LYETHPLADTINRKTYNS-LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
+ H R++YN+ L N L E +N L DF+ Y
Sbjct: 308 GFAVHTPTWYDLRESYNAALSSNILACEAPYNQTLSDFLVTPEYDY-------LTYDYNL 360
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
++ G + + G + S L+ V+ + +
Sbjct: 361 TTPWKFNISA--GTTFAGAVAVG-AEYEYQDYSSSKLKDVDGYELGDQPSVENYLKGVHT 417
Query: 185 LGIGLDYMVNYDISLSASYRY--IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
IG++ + + S+ A Y Y + + + S + + + + G+
Sbjct: 418 FRIGMETRIIPEFSIRAGYNYSSAAFSKDAYSALSLYSTRTDFNNTESKNTFTFGLGYR 476
>gi|37963670|gb|AAR05966.1| 'ORFN [Sphingobium indicum]
Length = 86
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+G+D +N + L+ +YI + S A + V+RV + + + +G
Sbjct: 23 SDSFGWAGQVGVDIDLNERMFLNFDVKYIDIDTTA-RLSIAGAGVQRVKLELDPFVFGVG 81
Query: 238 INMHF 242
+ M F
Sbjct: 82 VGMKF 86
>gi|329947191|ref|ZP_08294515.1| LPXTG-motif protein cell wall anchor domain protein [Actinomyces
sp. oral taxon 170 str. F0386]
gi|328525703|gb|EGF52729.1| LPXTG-motif protein cell wall anchor domain protein [Actinomyces
sp. oral taxon 170 str. F0386]
Length = 854
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 20/181 (11%), Positives = 51/181 (28%), Gaps = 19/181 (10%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK 123
R T +D + + +++G Q ++++G + D++
Sbjct: 242 GRTRSTITFSDELGPGQVYVPTKSDWKLKIG-TAQGRNYIYGQVTDASGTDQDTSQGDFD 300
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
I G+ + I G F + + + +
Sbjct: 301 LDVAIQGNT----------VTITVTGPFAPQTNYHIYYSSTPTTADGVVQAGVEYTNKAS 350
Query: 184 VLGIGLDYM----VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
V+G GL++ +++ + ++ + + E +GIN
Sbjct: 351 VVGSGLEHSYSVHYTKSFTINVE---MKPGFGGLDITKLLTGSETAKVPAGT-TFQVGIN 406
Query: 240 M 240
Sbjct: 407 Y 407
>gi|119505250|ref|ZP_01627325.1| hypothetical protein MGP2080_14756 [marine gamma proteobacterium
HTCC2080]
gi|119458941|gb|EAW40041.1| hypothetical protein MGP2080_14756 [marine gamma proteobacterium
HTCC2080]
Length = 311
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%)
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
LD+ + S SASY Y + + ++ V+ + GIN
Sbjct: 75 LDHDLTDKTSASASYGYSRVDYQDFDFLSRETHTLGVNISSKLKSVTAGINY 126
>gi|260365029|ref|ZP_05777600.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|260879576|ref|ZP_05891931.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308093439|gb|EFO43134.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308111718|gb|EFO49258.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
Length = 362
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 59/192 (30%), Gaps = 23/192 (11%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIEL-GHNIQLEDFVFGINCHTTAAKDDSTFYR 121
+ Y + + ++ GL + L G N + T +
Sbjct: 172 VGYGYSSDVTISEDTDISIDTNYSAGLNLTLSGDNYRWNFAYLNAEYDQT-TVLSNAMAP 230
Query: 122 LKEKYFIYGDVVLKA------------GYSVDSLLIYGMG-----GFGGAYVIDSSLEKV 164
+ + G + LKA Y VD + + G +L K
Sbjct: 231 IPGQGSAVGTIRLKAEDQHIQLFSLGAKYEVDRITVTAEGQTSDISTSWYAATSYNLNKF 290
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + + + GL + V+Y++S++A +++ + NN + +
Sbjct: 291 TPYVVYGQQFDDNEKKTGDSVLTGLRFDVDYNVSVNAEWQHF----KAFNNDSGAFSLPP 346
Query: 225 VDRKGNAHIASL 236
D N + L
Sbjct: 347 ADTNANLYTVML 358
>gi|254696122|ref|ZP_05157950.1| porin [Brucella abortus bv. 2 str. 86/8/59]
gi|254705299|ref|ZP_05167127.1| porin [Brucella suis bv. 3 str. 686]
gi|260760487|ref|ZP_05872833.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260670922|gb|EEX57743.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
Length = 71
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 22/76 (28%), Gaps = 9/76 (11%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+ L ++++ + A D + A W+G Y G +
Sbjct: 3 FKNLLGASLVAVITSTSAYAADAIV---------AQEPAPIAIAPSFSWAGAYFGGQVGY 53
Query: 66 LYETHPLADTINRKTY 81
+ L + N T
Sbjct: 54 GWGRAKLENRTNGGTS 69
>gi|258541844|ref|YP_003187277.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
gi|256632922|dbj|BAH98897.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
gi|256635979|dbj|BAI01948.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-03]
gi|256639034|dbj|BAI04996.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-07]
gi|256642088|dbj|BAI08043.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-22]
gi|256645143|dbj|BAI11091.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-26]
gi|256648198|dbj|BAI14139.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-32]
gi|256651251|dbj|BAI17185.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654242|dbj|BAI20169.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-12]
Length = 411
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 17/174 (9%), Positives = 37/174 (21%), Gaps = 24/174 (13%)
Query: 24 LAVDLYLPRKIDLFNEADN--NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTY 81
+ + R N + D W Y G I + + T
Sbjct: 124 FVTNTFNSRADGRRQTYGVMANALFDLDVGKPWLFPYFGAGIGYGWTAMRTSITAPGNQL 183
Query: 82 NSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD 141
+ G + + + + + +
Sbjct: 184 AEKMGGTFG------------------NFAYQGIFGLAFPIPWVVGLSATAEYRFWTMLG 225
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVN 194
G + + ++ + + G D + L +GL Y N
Sbjct: 226 ---PQSHGATSWGTIGGTINSINQTHPYQFSSGHHDTKTDFNHTLMLGLRYEFN 276
Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 29/217 (13%), Positives = 56/217 (25%), Gaps = 31/217 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH-NIQLED-FVFGINCHTTAA 113
G Y+ + T + +G L + F + +
Sbjct: 60 GLYIAGEGGATFNQDQRVRTSAQFPDGRDRWRTGAAGIGSIGWGLGNGFRVEVEGDYRSM 119
Query: 114 K-----DDSTFYRLKEKYFIYGDVVLKAGYSVDS----LLIYGMGGFGGAYVIDSSLEKV 164
++ R + YG V+ A + +D L Y G G + +
Sbjct: 120 GYQRFVTNTFNSRADGRRQTYG-VMANALFDLDVGKPWLFPYFGAGIGYGWTAMRTSITA 178
Query: 165 ESDNSKNA-KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ G F + G+ +S +A YR+ + + + +
Sbjct: 179 PGNQLAEKMGGTFGNFAYQGIFGLAFPIPWVVGLSATAEYRFWTMLGPQSHGATSWGTIG 238
Query: 224 RV-----------------DRKGNA-HIASLGINMHF 242
D K + H LG+ F
Sbjct: 239 GTINSINQTHPYQFSSGHHDTKTDFNHTLMLGLRYEF 275
>gi|254429023|ref|ZP_05042730.1| hypothetical protein ADG881_2253 [Alcanivorax sp. DG881]
gi|196195192|gb|EDX90151.1| hypothetical protein ADG881_2253 [Alcanivorax sp. DG881]
Length = 183
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 53/159 (33%), Gaps = 14/159 (8%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + S++ + DT K ++ + G + DF + D+
Sbjct: 27 YIGGNYSQIQYDNEEFDTDTLKIDSATVNAG--------FEFTDF-LALEARGGLGFDED 77
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + +K G + + Y +GG+ S+ V + +
Sbjct: 78 SQGIADFEMDHLYGGYVKLGAPIGETIRPYVIGGYTKVKGKVSANGTVAGVDYSYSDTET 137
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVN 214
S G GLD+ + + + Y RY+ ++
Sbjct: 138 FEDES---YGAGLDFNITDTVGANLEYMRYVDTDEEEIS 173
>gi|11907500|dbj|BAB19649.1| outer surface protein [Wolbachia sp. wAnd]
Length = 201
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 35 DNSDYSPLKASFLAGGGAFGYKMDDIRVDVEGVYSYLNKNNVTDARFTPDTIADSVTAIS 94
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 95 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 146
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 147 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGYTVLYSTVGAEAGVAFNF 201
>gi|194334731|ref|YP_002016591.1| surface antigen msp4 family protein [Prosthecochloris aestuarii DSM
271]
gi|194312549|gb|ACF46944.1| surface antigen msp4 family protein [Prosthecochloris aestuarii DSM
271]
Length = 227
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 26/205 (12%), Positives = 65/205 (31%), Gaps = 26/205 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLL-----PNGLGIELGHNIQLEDFVFGINCHTTA 112
Y +I + + A + + +G+ + +
Sbjct: 27 YASGNIGVTWLSDSQATLGDYSERDEYQLEVDFDSGIALTGALGYDFGSTRLEAELGYQS 86
Query: 113 AKD----------DSTFYRLKEKYFIYGDVVLKAGY------SVDSLLIYGMGGFGGAYV 156
D ++ + + ++ GY L I+ G G A+
Sbjct: 87 NDAAEIRWYEDGFDDSYDAYELSGDVSLTTLMLNGYYDIKPSDASDLEIFLTAGIGAAFY 146
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
E + + +G + G + +G GL Y V+ ++++ A YRY S +
Sbjct: 147 TLDFGEVDDDEY----RGTYHGSTLAYQIGAGLAYAVSSELTVEARYRYFSTAEFS-TDD 201
Query: 217 NAKSDVERVDRKGNAHIASLGINMH 241
+ + + + +++ +G+ +
Sbjct: 202 DFDTFDDGYNLDLSSNAMLIGLRYN 226
>gi|297185485|gb|ADI24122.1| outer membrane protein W [Aeromonas hydrophila]
Length = 197
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 28/92 (30%), Gaps = 5/92 (5%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ G V ++ + + + + +GLD +N ++ S +
Sbjct: 111 YVGIGVNYTTFFDEQGRGPLSNADVSLDNSWGMAGQVGLDMAINDRWFVNGSAWIMDIDT 170
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N + + K + + G+ F
Sbjct: 171 DVHVNGG-----DGIKTKIDPMVFMFGVGYRF 197
>gi|294787746|ref|ZP_06752990.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
gi|294484039|gb|EFG31722.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
Length = 413
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 62/234 (26%), Gaps = 58/234 (24%)
Query: 58 YVGLHISR--LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA-- 113
YV + A N ++ ++G Q D+ G T +
Sbjct: 188 YVFGTLGALRAGTKATYAGPQNIYGVSNDNDTRFAGQVGFGTQFNDW-LGAELFYTGSAP 246
Query: 114 -KDDSTFYRLKEKYFIYGDVVLKAGYS------------------------VDSLLIYGM 148
K DST Y V K + D ++
Sbjct: 247 HKFDSTAYLGNTTNSDLKTAVDKGWIAGTQNYVNETQQHTYGARLTLGKNLTDKFRLFAK 306
Query: 149 GGFGGAYVIDSSLEKVESDNSK--------------------NAKGRFDGHGSSVVLGIG 188
GG G + + +S NS N G + GIG
Sbjct: 307 GGVAGTTMKIEEVTGGQSSNSSPNLINSTVQSGLNSVNGAVKNKLKGQKGTFARATAGIG 366
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y +N +++ Y + + + +++ + H +GI +F
Sbjct: 367 ATYNLNDKLAVRGDYDH--YFKKNYDHNGHTYTAKG------KHYVGVGIQYNF 412
>gi|417411|sp|Q04875|OPAG_NEIGO RecName: Full=Opacity protein opA52; AltName: Full=opA31; Flags:
Precursor
gi|940791|emb|CAA79362.1| outer membrane protein [Neisseria gonorrhoeae]
Length = 247
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 16/102 (15%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
++L Y G Y D K + + + + G+ V ++L
Sbjct: 162 NTLTAYHGAGTKPTYYDDIDSGKNQKNTYRQNRSSR---RLGFGAMAGVGIDVAPGLTLD 218
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A YRY + + H ASLG+ F
Sbjct: 219 AGYRYHYWGRLE-------------NTRFKTHEASLGVRYRF 247
>gi|84385444|ref|ZP_00988475.1| hypothetical protein V12B01_24959 [Vibrio splendidus 12B01]
gi|84379424|gb|EAP96276.1| hypothetical protein V12B01_24959 [Vibrio splendidus 12B01]
Length = 199
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 57/216 (26%), Gaps = 23/216 (10%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN 87
+ L + ++ Y G+ I ET + + L
Sbjct: 6 IALSLFTAFGISSQALASETENSPRDHGHFYAGVDIGFYNETELEYRGSAIEDSSDLSDF 65
Query: 88 GLGIELGHNIQLEDFV-FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
+ G+ D V G+ K Y D+ +A +
Sbjct: 66 SYNLVGGYEFNTHDVVKLGLEAEHRKIG--------KVSYSDLMDIEGQAFFVNIKPKFI 117
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G YV + +K ++ +G L +V +I + YRY
Sbjct: 118 VQGDVLDLYVSLLAGVGSMDMEAKAFGVSGSKSEAAYQVGAELGAIVTDNIDIHIGYRYA 177
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I S++ S A LG HF
Sbjct: 178 NVEIESIDVS--------------PQTAYLGARYHF 199
>gi|66866375|gb|AAY57837.1| outer membrane protein J [Moraxella catarrhalis]
gi|326571641|gb|EGE21656.1| outer membrane protein J [Moraxella catarrhalis BC7]
Length = 180
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 48/165 (29%), Gaps = 30/165 (18%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG I ++ GI G+N FG+ +
Sbjct: 35 YVGAKIGQVDAKQINGKNT-----------AYGIYAGYNFDQN---FGVEAEFVGSDAKE 80
Query: 118 TFYRLK------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + + YG Y+ + Y G G A +
Sbjct: 81 FNTGVSPVKGDVKSFGAYGTYR----YNFINTPFYAKGKLGIAKTKVDVTSRN------A 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+S+ G+G+ + ++ + ASY Y+ ++++
Sbjct: 131 TTYSNKSDKTSLAGGVGVGFKPLANVGVEASYNYLSEDANAISLG 175
>gi|269959564|ref|ZP_06173946.1| outer membrane protein OmpW [Vibrio harveyi 1DA3]
gi|269835751|gb|EEZ89828.1| outer membrane protein OmpW [Vibrio harveyi 1DA3]
Length = 214
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S Y G D + D + +G+DYM+N
Sbjct: 112 FGDSQSKFRPYVGAGLNYTIFFDEGFNGTGKGAGLSDLKLDDS--FGLAANVGVDYMIND 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + ++ D + N + + F
Sbjct: 170 KWFLNASAWYANIETEATYKAGG--AKQKTDVEINPWVFMISGGYKF 214
>gi|268679200|ref|YP_003303631.1| outer membrane insertion C-terminal signal [Sulfurospirillum
deleyianum DSM 6946]
gi|268617231|gb|ACZ11596.1| outer membrane insertion C-terminal signal [Sulfurospirillum
deleyianum DSM 6946]
Length = 206
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 45/187 (24%), Gaps = 6/187 (3%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
+VG + + + N G N E G T
Sbjct: 25 WFVGGEFGGMSIHGKSTASADIHISNGDTVLGGSTSDTFNTTYEAIKIG-----TYFDYG 79
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + + G D L V S D+
Sbjct: 80 RIYGSVAYQNETETMTSYTYGLGYDYLFRNKSNFTPFIGVNASYTVADIDDDLAKELSLD 139
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN-AHIAS 235
G + G+ Y + ++ L RY+ I + + + + +
Sbjct: 140 KPKGFNYGAEAGVLYALTKNMELEVGVRYMISDIDDTSTFDESGTNVDLKMENDRIVQYY 199
Query: 236 LGINMHF 242
LG+N F
Sbjct: 200 LGLNYKF 206
>gi|209520034|ref|ZP_03268811.1| OmpW family protein [Burkholderia sp. H160]
gi|209499519|gb|EDZ99597.1| OmpW family protein [Burkholderia sp. H160]
Length = 241
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 15/190 (7%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
P T + +G G+ + +FV G+ S K
Sbjct: 52 GGSPTNITEANTGATLDSADTIGFTGGYFITDHIATEFVIGVPPSFDLQGSGSLEQYGKL 111
Query: 125 KYFIYGDVVLKAGYSVD----SLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGRFDG 178
L Y + SL Y G D + E++ K
Sbjct: 112 GQAKQWSPTLLFKYYFNAPTASLRPYLGLGVSRVSFTDAKITNSAFEANVLKGPTTVSTD 171
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS--- 235
V G Y N S Y+P + +S + + V + + I
Sbjct: 172 SSWVPVFNAGFTYAFNQHWFAGVSISYLPLSTTAKLSSQSTTPVGTLTIQSQTKIKLNPI 231
Query: 236 ---LGINMHF 242
+ + F
Sbjct: 232 VSYVNVGYRF 241
>gi|116253817|ref|YP_769655.1| hypothetical protein RL4080 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258465|emb|CAK09569.1| conserved hypothetical exported protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 512
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 15/129 (11%), Positives = 34/129 (26%), Gaps = 20/129 (15%)
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D T L ++ G + + GY + LI + +
Sbjct: 293 SDGTTVSLSDRNQTTGTLRGRVGYELSPALIPF----------IEANIGRTVYDETQDSA 342
Query: 175 RFDGHGSSVVLGIGLDYMVNYDIS--LSASYRYIPH--------HIHSVNNSNAKSDVER 224
++ G S G++ + + + Y +++ S S +
Sbjct: 343 GYERSGHSYGAKAGVEVDLGEKLKGEVGVGYEMADFEDSRLSSIDTATLDASLLWSPIRG 402
Query: 225 VDRKGNAHI 233
D +
Sbjct: 403 TDVNLDLQT 411
>gi|86134478|ref|ZP_01053060.1| conserved hypothetical protein [Polaribacter sp. MED152]
gi|85821341|gb|EAQ42488.1| conserved hypothetical protein [Polaribacter sp. MED152]
Length = 225
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 21/54 (38%)
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y N I+L A+Y Y+P ++ + H ++G+ +F
Sbjct: 54 FKYNWNPKIALRATYSYLPIEADDLDADTDFKRDRGLSFSNTIHELAIGLEYNF 107
>gi|296534950|ref|ZP_06897250.1| outer membrane protein OmpW [Roseomonas cervicalis ATCC 49957]
gi|296264722|gb|EFH11047.1| outer membrane protein OmpW [Roseomonas cervicalis ATCC 49957]
Length = 226
Score = 36.3 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 21/101 (20%), Gaps = 9/101 (8%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
Y G + + + L G DY +N ++
Sbjct: 135 RFSPYVGAGI-----NYTVFYGEGGSRTAPVSKVDIENSWGWALNAGFDYAINDRWGVNL 189
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + N A + I + F
Sbjct: 190 DVKKLFLRPDVSVNGGAI----GARADLDPWIVGASLRYRF 226
>gi|198274075|ref|ZP_03206607.1| hypothetical protein BACPLE_00212 [Bacteroides plebeius DSM 17135]
gi|198273153|gb|EDY97422.1| hypothetical protein BACPLE_00212 [Bacteroides plebeius DSM 17135]
Length = 186
Score = 36.3 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 10/109 (9%)
Query: 33 KIDLFNEADNNVEYQDDEYGIW-----SGNYVGLH-ISRLYETHPLADTINRKTYNS-LL 85
+L ++ E W +G+++ LH + + + I N
Sbjct: 58 PFNLGDDRKMKHWLVQPEARYWFCEAFNGHFLALHALGGQFNVANMDLGIFPSFKNYRYQ 117
Query: 86 PNGLGIELGHNIQL---EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
N G +G+ Q + + G+ + D Y G
Sbjct: 118 GNMYGAGIGYGYQFVLSKHWNLGLEIGAGWIRADYDKYDCPHCGEWRGS 166
>gi|308050187|ref|YP_003913753.1| decaheme-associated outer membrane protein, MtrB/PioB family
[Ferrimonas balearica DSM 9799]
gi|308051324|ref|YP_003914890.1| decaheme-associated outer membrane protein, MtrB/PioB family
[Ferrimonas balearica DSM 9799]
gi|307632377|gb|ADN76679.1| decaheme-associated outer membrane protein, MtrB/PioB family
[Ferrimonas balearica DSM 9799]
gi|307633514|gb|ADN77816.1| decaheme-associated outer membrane protein, MtrB/PioB family
[Ferrimonas balearica DSM 9799]
Length = 665
Score = 36.3 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 34/117 (29%), Gaps = 14/117 (11%)
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF---------DGHGSSVVLGIG 188
Y ++ Y G ++D L + D + +
Sbjct: 547 YRIEDQFDYAGVGASYGGLMDDRLTVGADYQYTESSSDTQVSEGQPYGDYFQWAHSVRAY 606
Query: 189 LDYMVNYDISLSASYRY-----IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
DY V+ S+ YRY + + ++ + + NAH+ L +
Sbjct: 607 ADYAVSTRTSVRLDYRYERYYDTDYADVASDSIPGLITLGDLGHNYNAHLLMLTLTY 663
>gi|126740758|ref|ZP_01756443.1| hypothetical protein RSK20926_09764 [Roseobacter sp. SK209-2-6]
gi|126718054|gb|EBA14771.1| hypothetical protein RSK20926_09764 [Roseobacter sp. SK209-2-6]
Length = 230
Score = 36.3 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 24/209 (11%), Positives = 47/209 (22%), Gaps = 28/209 (13%)
Query: 56 GNYVGLHIS-----RLYETHPLADTINRKTYNSLLPNGLGIELG---HNIQLEDFVFGIN 107
G Y+ I + + + GL LG + I
Sbjct: 28 GFYLQGQIGLSQLQGADFSGQIGGGSQSVATDFDDGYGLRFALGKEVVAWSNSNIGTRIE 87
Query: 108 CHTTAAKDDSTFYRLKEKYFIY----------GDVVLKAGYSV---DSLLIYGMGGFGGA 154
+D+ + + + G G
Sbjct: 88 LEFAYQNNDADAVNFSGNGPAPEGNVSGDVSSASLFANVLFDFKQSGKFTPFAGFGLGLT 147
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSV 213
+ D + +G+ Y VN SL RY + S
Sbjct: 148 RSDLDVVYGPGVVIRG------DDTNFAAQAIVGVSYAVNEQTSLVFDARYARAFDVASP 201
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + V+ ++ + G+ F
Sbjct: 202 RLAPSGALTGVVEDDLDSFSINAGLRFRF 230
>gi|293398509|ref|ZP_06642687.1| conserved hypothetical protein [Neisseria gonorrhoeae F62]
gi|291610980|gb|EFF40077.1| conserved hypothetical protein [Neisseria gonorrhoeae F62]
Length = 64
Score = 36.3 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+ V ++L A YRY + + H A
Sbjct: 10 NRSSRRLGFGAMAGVGIDVAPGLTLDAGYRYHYWGRLE-------------NTRFKTHEA 56
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 57 SLGVRYRF 64
>gi|323185584|gb|EFZ70945.1| outer membrane protein W [Escherichia coli 1357]
Length = 212
Score = 36.3 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 212
>gi|218259847|ref|ZP_03475400.1| hypothetical protein PRABACTJOHN_01059 [Parabacteroides johnsonii
DSM 18315]
gi|218224883|gb|EEC97533.1| hypothetical protein PRABACTJOHN_01059 [Parabacteroides johnsonii
DSM 18315]
Length = 167
Score = 36.3 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 8/144 (5%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
I + + N LG++ +N+ + + KD +T +
Sbjct: 15 IGVFAQKGNFSLLGNFGYQTDFKRVMLGVQGRYNLT-DHVRLAPDLMFFFPKDKTTGLDV 73
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
D+ S D L +Y + GF V+ + +
Sbjct: 74 DVNAHYVFDL------SEDHLSLYPLAGF-NLQNNFQGKRTVKGEEGEVTLDSHSSTNFG 126
Query: 183 VVLGIGLDYMVNYDISLSASYRYI 206
+G GL Y +N L+ Y+Y+
Sbjct: 127 FNVGGGLTYNLNSRNFLNVEYKYV 150
>gi|331682743|ref|ZP_08383362.1| outer membrane protein W [Escherichia coli H299]
gi|331080374|gb|EGI51553.1| outer membrane protein W [Escherichia coli H299]
Length = 212
Score = 36.3 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKETGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 212
>gi|148654165|ref|YP_001281258.1| OmpA domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148573249|gb|ABQ95308.1| OmpA domain protein transmembrane region-containing protein
[Psychrobacter sp. PRwf-1]
Length = 192
Score = 36.3 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 17/155 (10%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G+ G FGI D+ + +YG + Y+ +Y
Sbjct: 55 SYGVYGGAKFTPN---FGIEAEYLTTSDEDFAPGSEYSADVYG-LYGTYDYTFPGSQMYA 110
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G G A K + + G+ + G+GL Y + + ++ +Y + P
Sbjct: 111 KGRLGVAKNKVDVDAKNVAGQVASYNGKHSDT--GIAGGLGLGYNIAPNAAVELAYDWYP 168
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
K + +A +LG N F
Sbjct: 169 -----------KVENVGSKGDLDASGITLGANFKF 192
>gi|254468104|ref|ZP_05081510.1| hypothetical protein KB13_329 [beta proteobacterium KB13]
gi|207086914|gb|EDZ64197.1| hypothetical protein KB13_329 [beta proteobacterium KB13]
Length = 351
Score = 36.3 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 53/193 (27%), Gaps = 30/193 (15%)
Query: 79 KTYNSLLPNGL----GIELGHN-IQLEDFVFG---INCHTTAAKDDSTFYRLKEKYFIYG 130
K YN+ +G G+ N Q + V G +N + + + + I
Sbjct: 160 KPYNAFQKDGFIIMLGLTAEFNDFQNNNVVAGGINVNSDSENEVEAGINFNAAYQKNISD 219
Query: 131 DVVLKAGYSVDSLLI-----------------YGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + G + + Y + + + S + +
Sbjct: 220 NFSVLIGLELSPHIGQKTSLQNSSATTDIERDYTVSAYLQPQLQISENSAISFKTGLSRA 279
Query: 174 ----GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
V G+G + + ++ + + + + + D
Sbjct: 280 KVDVNNQSVDYDGYVFGLGYRHQLKKNLFWFGEFNQYIFSDENTSAMVG-GGLLQQDLDL 338
Query: 230 NAHIASLGINMHF 242
++ +LG+ F
Sbjct: 339 DSRSLNLGLGYQF 351
>gi|315288650|gb|EFU48048.1| outer membrane protein W [Escherichia coli MS 110-3]
gi|315295210|gb|EFU54545.1| outer membrane protein W [Escherichia coli MS 153-1]
Length = 228
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 126 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 183
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + S + + V + S G F
Sbjct: 184 DWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAG--YRF 228
>gi|257464192|ref|ZP_05628572.1| Serine protease [Fusobacterium sp. D12]
gi|317061711|ref|ZP_07926196.1| predicted protein [Fusobacterium sp. D12]
gi|313687387|gb|EFS24222.1| predicted protein [Fusobacterium sp. D12]
Length = 753
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+G GL Y + + SL Y Y+ + + N ++ +
Sbjct: 679 WTVGAGLQYHIFDNFSLLGRYNYMQY----YDLHNHQNSLSGFGAGIGFDTFM 727
>gi|198244814|ref|YP_002215254.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197939330|gb|ACH76663.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|326623000|gb|EGE29345.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 165
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 15/155 (9%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+G+ + Y+ L N G + +N + D FG T D
Sbjct: 17 IGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVN 76
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
Y K Y +++ Y + L Y M G ++ D+
Sbjct: 77 NYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANRHIKDNW--------------GNS 122
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ ++ G G+ +I+++ASY + +
Sbjct: 123 DNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDA 157
>gi|12382115|gb|AAG53030.1| major outer membrane protein OmpA [Erwinia amylovora]
Length = 149
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + G S + +G++Y V + ++++ N +
Sbjct: 14 ADATQTNPTFGRISNHDTGVSPLAAVGVEYAVTKTWATCLDFQWV----------NTIGN 63
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + + + S+G+++ F
Sbjct: 64 AGTVGARPDTSMLSVGVSLPF 84
>gi|4379295|emb|CAA29748.1| unnamed protein product [Neisseria meningitidis]
Length = 260
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 29/124 (23%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V + +K + V+
Sbjct: 150 DKFKPYIGARVAYGHVKHQVHSVETKTTTVTSKPKGGTPAGGPVIKTDPSKPPYHESHSI 209
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H ASLG+
Sbjct: 210 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEASLGM 256
Query: 239 NMHF 242
F
Sbjct: 257 RYRF 260
>gi|262371788|ref|ZP_06065067.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262311813|gb|EEY92898.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 432
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 7/67 (10%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN---AHI 233
+ + +G Y + Y ++ + +N+ +V ++ N
Sbjct: 282 NESDLGWGIALGAKYKFTDSLQAMLDYSHVKGDSKFLLYTNSAFNVNPINDDLNLNEFDA 341
Query: 234 ASLGINM 240
++G
Sbjct: 342 VTVGTTY 348
>gi|256838692|ref|ZP_05544202.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256739611|gb|EEU52935.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 317
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 53/183 (28%), Gaps = 19/183 (10%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
+I + T + NGL ++G++ + FG + K T+
Sbjct: 153 ANIGYAFVTSKFYLPPGGSGHPK---NGLDWQVGYDW-ISRSGFGAGLLYSGYKSSYTYS 208
Query: 121 RLKEKYF-IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ Y ++ ++ G G +S+ E
Sbjct: 209 GIDINVGLTYVAPQFVMKQIINRWIVEEKIGIGYFSYRESARGISE-----------SLS 257
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G +G +Y+++ + + + Y+ + N + + G+
Sbjct: 258 GVGYNFSLGAEYLLSKHVGVGLNIGYVGGSLPKQENVSYDKGDYSGLFRLTFD---AGVR 314
Query: 240 MHF 242
HF
Sbjct: 315 FHF 317
>gi|158634546|gb|ABW76123.1| outer surface protein [Wolbachia endosymbiont of Odontosema
anastrephae]
Length = 203
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 17/173 (9%)
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG- 137
+N L + + +++D + + + I + +G
Sbjct: 39 DIHNPLKASFIAGGGAFGYKMDDIRVDVEGVYSYLNKNDVTDAKFTPDTIADSLTAISGL 98
Query: 138 ----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
Y + + Y G G AY+ + V SK + G+
Sbjct: 99 VNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKAGV 150
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 151 SYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 203
>gi|188534330|ref|YP_001908127.1| outer membrane protein X [Erwinia tasmaniensis Et1/99]
gi|188029372|emb|CAO97249.1| Virulence-related outer membrane protein X [Erwinia tasmaniensis
Et1/99]
Length = 169
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 45/180 (25%), Gaps = 28/180 (15%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
++ + Y G L + + G T + D T
Sbjct: 18 AGSAMAQSTVSGGYAQSDYQGQANKANGFNLKYRYENGSDPLGWIGSFTYTEKDRTDAGE 77
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
+K YG A D IYG+ G G + + + D
Sbjct: 78 YKKGQYYGVTGGPAFRLNDWASIYGVVGIGYGKFQST----------GADRAKSDFSDVG 127
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G G+ + +++L Y + R + + G+ F
Sbjct: 128 FSYGAGMQFNPIQNVALDVGYE------------------QSRIRSVDVGTWTAGVGYSF 169
>gi|89887408|gb|ABD78350.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia cameroni]
Length = 197
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 24/176 (13%), Positives = 55/176 (31%), Gaps = 13/176 (7%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG- 130
+ + ++ + L + + +++D + + D+ +
Sbjct: 30 ITNATGKEKDSPLKASFIAGGGAFGYKMDDIRVDVEGLYSWLNKDADVVGDTVADNLTAI 89
Query: 131 DVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
++ Y + + Y G G AY+ + V SK +
Sbjct: 90 SGLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VK 141
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 142 AGVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 197
>gi|320199292|gb|EFW73883.1| Outer membrane protein W precursor [Escherichia coli EC4100B]
Length = 212
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTANYKLGGEQQHDSVRLDPWVFMFSAG--YRF 212
>gi|302326357|gb|ADL25558.1| P2 domain protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 398
Score = 36.3 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 33/117 (28%), Gaps = 12/117 (10%)
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY 138
+ + NG G G N + F + S+ L GY
Sbjct: 241 GDISDKVKNGFGFYGGTNWYWNNVSFEGQINAHFNDVRSSDTLHFSNLGW----NLNVGY 296
Query: 139 SVDSL--LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ L Y G + ++ ++ + D + V G G+ Y +
Sbjct: 297 YFRDISLLCYLTTGVEADFYGENKSNDDKN------RSSMDSYQVYPVYGAGILYDM 347
>gi|295690965|ref|YP_003594658.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295432868|gb|ADG12040.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
Length = 386
Score = 36.3 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 69/234 (29%), Gaps = 21/234 (8%)
Query: 26 VDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE-THPLADTINRKTYNSL 84
D+ D+ + NN ++ W+ + + + + +
Sbjct: 33 ADVGYHESKDVKATSTNNYQWNFGGEHDWAAF---GRLGYKFTPNWRVEAEYGFRPNDLK 89
Query: 85 LPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS-- 142
G G+ G + G+ + + ++ + +
Sbjct: 90 TVRGAGL-AGVDGTGTGQPIGLCTPGVGRSPSAPDCGEIDGKMKATTLMANVLFDMAPNS 148
Query: 143 -LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG---RFDGHGSSVVLGI--GLDYMVNYD 196
L + G G A+V + + ++ + A+ FD + + GL + +
Sbjct: 149 SLNPFIGAGVGTAWVHNKAYGQLSGVPTGAARFQNTNFDDVDQAFAMQGIVGLGWNFAPN 208
Query: 197 ISLSASYRYIPHHI--------HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S+ + RY+ ++ + +DV + +LG+ F
Sbjct: 209 WSMDLTGRYLRTSKLDWGSVTQNAGPAGGSITDVGTFSGRYKDTSVTLGLRYTF 262
>gi|260548958|ref|ZP_05823180.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260408126|gb|EEX01597.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 444
Score = 36.3 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 43/140 (30%), Gaps = 5/140 (3%)
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
G + + L K G + YS+ L G+ S+
Sbjct: 228 LGPTTQLFVSAEKGDSTALNGKQDANGSWLNDSVKYSLPVLTAKITQGYADGKGSASARA 287
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
VE+ S + + + G D+ V+ + L A Y+ + SNA +
Sbjct: 288 LVENYKSPTG---NKDNKTGWGIAAGTDFKVSDPLKLFADVSYVVGDSSYLYGSNAAYTL 344
Query: 223 ERVDRKGNAHI-ASLGINMH 241
D + N + +G
Sbjct: 345 VNNDIEQNKFVAVQVGGTYK 364
>gi|156933730|ref|YP_001437646.1| outer membrane protein W [Cronobacter sakazakii ATCC BAA-894]
gi|156531984|gb|ABU76810.1| hypothetical protein ESA_01556 [Cronobacter sakazakii ATCC BAA-894]
Length = 210
Score = 36.3 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 26/98 (26%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D N + D +GLDYMVN D ++ S
Sbjct: 117 PYIGAGINYTTFFDEDFNDTGKKNGLSDLSVDDSW--GAAGQVGLDYMVNKDWLINMSVW 174
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ + K + S G F
Sbjct: 175 YMDIDTTVKFKTGGKQYNIDTRIDPWVFMFSAG--YRF 210
>gi|265750924|ref|ZP_06086987.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263237820|gb|EEZ23270.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 1129
Score = 35.9 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 32/109 (29%), Gaps = 1/109 (0%)
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D+ ++A Y V+ L G+ G I + ++ +
Sbjct: 751 DWLTDLRIRASYGVNGTLPSDYFGYMGLSSISDGYLEQPGIQMSQIANPNLKWETNYNMN 810
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
IGLD+ ++ + Y Y + + + + N
Sbjct: 811 IGLDFGFWDRLNFTIEY-YTRTTKNLLMDCPVSMTTGFSNYLMNIGEVK 858
>gi|260778787|ref|ZP_05887679.1| PlaA [Vibrio coralliilyticus ATCC BAA-450]
gi|260604951|gb|EEX31246.1| PlaA [Vibrio coralliilyticus ATCC BAA-450]
Length = 303
Score = 35.9 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 55/166 (33%), Gaps = 14/166 (8%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTA---AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLI 145
+G G+ L + GI + A S + Y V L G + + L
Sbjct: 140 VGALAGYQYNLFKWD-GIGGTYSYNNGADVGSFPNVVGIDYKQEFSV-LYLGLAGEYKLD 197
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM--VNYDISLSASY 203
G + + V+ N ++ + +S + + L+Y + L A Y
Sbjct: 198 KSDFGAQLKWSPWVDAKDVDHHNMRDLTFYEQSNRNSDFISLSLNYGYHFTPSMKLYAEY 257
Query: 204 RYIPH-----HIHSVNNSNAKSDVERVDRKGNAH--IASLGINMHF 242
Y + V+NS+ S V + H S+G+ F
Sbjct: 258 VYTKYSEAKADTTIVDNSSGDSGVVPNGAGLDNHNSTVSVGLKYTF 303
>gi|129190|sp|P10170|OPR1_NEIMC RecName: Full=Opacity-related protein POPM1
Length = 260
Score = 35.9 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 29/124 (23%), Gaps = 35/124 (28%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-------------- 186
D Y +V + +K + V+
Sbjct: 150 DKFKPYIGARVAYGHVKHQVHSVETKTTTVTSKPKGGTPAGGPVIKTDPSKPPYHESHSI 209
Query: 187 --------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + + ++L YRY + + H ASLG+
Sbjct: 210 SSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEASLGM 256
Query: 239 NMHF 242
F
Sbjct: 257 RYRF 260
>gi|28899951|ref|NP_799606.1| outer membrane protein W [Vibrio parahaemolyticus RIMD 2210633]
gi|153837644|ref|ZP_01990311.1| outer membrane protein W [Vibrio parahaemolyticus AQ3810]
gi|260363245|ref|ZP_05776114.1| outer membrane protein W [Vibrio parahaemolyticus K5030]
gi|260880532|ref|ZP_05892887.1| outer membrane protein W [Vibrio parahaemolyticus AN-5034]
gi|260898515|ref|ZP_05907011.1| outer membrane protein W [Vibrio parahaemolyticus Peru-466]
gi|260902258|ref|ZP_05910653.1| outer membrane protein W [Vibrio parahaemolyticus AQ4037]
gi|28808234|dbj|BAC61439.1| outer membrane protein OmpW [Vibrio parahaemolyticus RIMD 2210633]
gi|89994001|gb|ABD83811.1| outer membrane protein [Vibrio parahaemolyticus]
gi|149749036|gb|EDM59855.1| outer membrane protein W [Vibrio parahaemolyticus AQ3810]
gi|308084973|gb|EFO34668.1| outer membrane protein W [Vibrio parahaemolyticus Peru-466]
gi|308092350|gb|EFO42045.1| outer membrane protein W [Vibrio parahaemolyticus AN-5034]
gi|308110506|gb|EFO48046.1| outer membrane protein W [Vibrio parahaemolyticus AQ4037]
gi|308112370|gb|EFO49910.1| outer membrane protein W [Vibrio parahaemolyticus K5030]
gi|328469938|gb|EGF40849.1| outer membrane protein W [Vibrio parahaemolyticus 10329]
Length = 214
Score = 35.9 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 29/107 (27%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G Y G D + D + +G+DYM+N
Sbjct: 112 FGEPQSKFRPYVGAGLNYTIFFDEGFNNKAKNVGLTDLKLDDS--FGLAANVGVDYMIND 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + ++ D K N + + F
Sbjct: 170 QWFLNASAWYANIETEATYKFGG--AKQKTDVKINPWVFMISGGYKF 214
>gi|322833606|ref|YP_004213633.1| outer membrane autotransporter barrel domain protein [Rahnella sp.
Y9602]
gi|321168807|gb|ADW74506.1| outer membrane autotransporter barrel domain protein [Rahnella sp.
Y9602]
Length = 897
Score = 35.9 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 52/154 (33%), Gaps = 21/154 (13%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG-----INCHTTAAKDDSTFYR 121
+++ NS G G++LG++ + + I D S
Sbjct: 732 STESTMSNGQQVSGDNSTDAWGFGLKLGYDWKFAPQAYLTPYASITGVFIGDDDYSMSNN 791
Query: 122 LKEKYFIYGDVV----LKAGYSVD-----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ Y + GY+ D ++ YG + + + + ++
Sbjct: 792 MHVSDQAYDSMRYELGGNLGYTFDLGADQAISPYGTLAYVYEDANNDANINGDRIDNGV- 850
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
GS+V +G+G + ++ + ++ A Y+
Sbjct: 851 ------DGSAVRVGLGGQFDMSKNFTVYAGANYL 878
>gi|67459706|ref|YP_247330.1| putative outer surface protein [Rickettsia felis URRWXCal2]
gi|67005239|gb|AAY62165.1| Putative outer surface protein [Rickettsia felis URRWXCal2]
Length = 227
Score = 35.9 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 62/199 (31%), Gaps = 20/199 (10%)
Query: 57 NYVGLHISRL-YETHPLADTINRKTYNSLLPNGLGIELGH--------NIQLEDFVFG-I 106
Y+ + + T + N+ +P LG +G+ ++ L + G +
Sbjct: 32 WYLRIDAGAAMFNKEKDKATGVKLKSNTTVPVDLG--IGYYISENFRADLTLGTIIGGKL 89
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS----VDSLLIYGMGGFGGAYVIDSSLE 162
A T + + +L GY D ++ G G A V +
Sbjct: 90 KKSGAATNAPFTGTNISASHKPTITRLLINGYVDLTNFDMFDVFAGAGVGPALVKEKITY 149
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH-IHSVNNSNAKSD 221
+ S N K + S L +G + + +Y +I S N +
Sbjct: 150 NGITGLSSNTK---NRTNISYKLTLGTSAQIADGVKAELAYSWIDDGRTKSKNVIYQGTS 206
Query: 222 VERVDRKGNAHIASLGINM 240
V + +H + GI
Sbjct: 207 VSTGGMRYQSHNLTAGIRF 225
>gi|323143211|ref|ZP_08077905.1| outer membrane autotransporter barrel domain protein
[Succinatimonas hippei YIT 12066]
gi|322416973|gb|EFY07613.1| outer membrane autotransporter barrel domain protein
[Succinatimonas hippei YIT 12066]
Length = 936
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 10/170 (5%)
Query: 82 NSLLPNGLGIELGHNIQLEDFVFG--INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS 139
+++ + +G+++ G T + K ++ G
Sbjct: 684 DTINADIFTGIVGYSVSFGSVDLGPFFETGHTKYRTKIKTEEGKSRHDSGSHTFAGVGMY 743
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
Y + E S + NA LG LD ++ +S
Sbjct: 744 ATWQTPYLVNISSYVKGGILKNEFQTSLSKVNADLSESSAYWGAHLGASLDAKLSSRLSA 803
Query: 200 S--ASYRYIPHHIHSVNNSNAKSDVERVDRKGN---AHIASLG--INMHF 242
SY Y + ++V D K + AH +G +N++F
Sbjct: 804 RPYLSYFY-DGRSGEEHFVAGNAEVGGADFKYDDLNAHRIRIGSVLNINF 852
>gi|315182605|gb|ADT89518.1| hypothetical protein vfu_B01335 [Vibrio furnissii NCTC 11218]
Length = 204
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 50/187 (26%), Gaps = 23/187 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAKDD 116
YVG + +++ G + G+ V G+ +
Sbjct: 39 YVGAGLGVYNNAEIEYGSLSTNETGDFGDFGYNLLAGYEFNTHKVVKLGVELEYRHFGEV 98
Query: 117 STFYRLKEKYF-IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ +L + + +V K S D +Y G ID + S
Sbjct: 99 NFADQLDVESDAFFINVRPKFIVSYDHADLYVAL-IAGLGTIDLDATATQYGVSA----- 152
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
++ G ++N + L YR + V+ D
Sbjct: 153 -SKSEAAFQYGAEFGVLLNEHVDLHVGYR--------------AAQVDVEDFDVTLSTGY 197
Query: 236 LGINMHF 242
GI HF
Sbjct: 198 AGIRYHF 204
>gi|331652294|ref|ZP_08353313.1| outer membrane protein W [Escherichia coli M718]
gi|331050572|gb|EGI22630.1| outer membrane protein W [Escherichia coli M718]
Length = 212
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D G++ + G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQV--GVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 168 DWLVNTSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 212
>gi|307726113|ref|YP_003909326.1| cellulose synthase operon C domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307586638|gb|ADN60035.1| cellulose synthase operon C domain protein [Burkholderia sp.
CCGE1003]
Length = 1646
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 54/178 (30%), Gaps = 17/178 (9%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
T A Y S +G+G+ +G+ + ++ L
Sbjct: 1319 AGLSNSTSAAAAVAGTNNYGSQTASGVGLSVGYEGRS------LSGDIGVTPIGFRETNL 1372
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
G + K YS+ V DS L + ++ + +
Sbjct: 1373 VGGAQYNGGISDKVSYSL---------AVARRAVTDSLLSYAGTRDAASGLEWGGVTSTG 1423
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS-NAKSDVERVDRKGNAHIASLGIN 239
+ + D + ++A+Y+Y H + NN+ V K ++G+N
Sbjct: 1424 GLASLAWD-DGTNGLYVNAAYQYYQGHNVASNNAVKGGGGVYTRLLKDADQTLTVGVN 1480
>gi|269103127|ref|ZP_06155824.1| accessory colonization factor AcfA [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163025|gb|EEZ41521.1| accessory colonization factor AcfA [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 212
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 19/174 (10%), Positives = 47/174 (27%), Gaps = 25/174 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKT---YNSLLPNGLGIELGHNIQLEDFVFGI----NCHT 110
YVGL + +H + + L +G+ G
Sbjct: 21 YVGLDLGLSTFSHDYQTHFSADNKTVSPNDSGMVLNGYVGYRWDEFGLELGYRHFDELDG 80
Query: 111 TAA---------------KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF---G 152
+++ D ++ K + + + L Y +
Sbjct: 81 SSSQFMGNVDGFRHEREWDADLKVSQITLKPVYFYTLTDRVELKTGLGLTYTQYDYRSGS 140
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ + +E + ++ + V+ +G+DY + + + A Y
Sbjct: 141 SDEYELITNDDIEHNVNRAGGENKKNNEFGVIASVGVDYRIWQQLHIGAGVDYY 194
>gi|288550090|ref|ZP_05969258.2| outer membrane protein X [Enterobacter cancerogenus ATCC 35316]
gi|288316715|gb|EFC55653.1| outer membrane protein X [Enterobacter cancerogenus ATCC 35316]
Length = 172
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 41/136 (30%), Gaps = 8/136 (5%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
T + + ++ G L + + ++ G+ T + D T K
Sbjct: 24 ATSTVTGGYAQSDMQGVMNKTNGFNLKYRYEQDNNPLGVIGSFTYTEKDRTENGAYNKGQ 83
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
YG A D IYG+ G G + E + G
Sbjct: 84 YYGITAGPAYRLNDWASIYGVVGVGYGKFQQTENEGLNR--------TASNSDYGFSYGA 135
Query: 188 GLDYMVNYDISLSASY 203
G+ + +++L SY
Sbjct: 136 GMQFNPIENVALDFSY 151
>gi|82776609|ref|YP_402958.1| outer membrane protein W [Shigella dysenteriae Sd197]
gi|81240757|gb|ABB61467.1| putative outer membrane protein [Shigella dysenteriae Sd197]
Length = 212
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D G++ + G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQV--GVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 212
>gi|297581080|ref|ZP_06943005.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297534906|gb|EFH73742.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 445
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 43/158 (27%), Gaps = 23/158 (14%)
Query: 92 ELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
+LG Q + + + E Y AGY++ ++ Y + G
Sbjct: 294 QLGFGYQGDQWSLQSEI----YTILGEKAVVPEGVGGY----AIAGYTLGNVTPYVIYG- 344
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI-------------GLDYMVNYDIS 198
++ + G ++G G+ + V I+
Sbjct: 345 -RFNPKNAPYQAQSDWGLSPVNGAQLAEVQKWLIGGINSTYIDQQTFSLGVRWDVTAQIA 403
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
L A Y YI + + + R S+
Sbjct: 404 LKAQYDYIQIADNGYGLWAIPLEADLQGRDVQLFSVSV 441
>gi|293398227|ref|ZP_06642432.1| conserved hypothetical protein [Neisseria gonorrhoeae F62]
gi|291611490|gb|EFF40560.1| conserved hypothetical protein [Neisseria gonorrhoeae F62]
Length = 83
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 21/84 (25%), Gaps = 13/84 (15%)
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+ E G+ V ++L A YRY
Sbjct: 13 KTSVPSEMPPKPAYHENRSSRRLGFGAMAGVGIDVAPGLTLDAGYRYHYWGRLE------ 66
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 67 -------NTRFKTHEASLGVRYRF 83
>gi|257126807|ref|YP_003164921.1| outer membrane autotransporter barrel domain protein [Leptotrichia
buccalis C-1013-b]
gi|257050746|gb|ACV39930.1| outer membrane autotransporter barrel domain protein [Leptotrichia
buccalis C-1013-b]
Length = 1017
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 40/134 (29%), Gaps = 2/134 (1%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDS 117
VG + + + + Y G ++G + Q + + G + A
Sbjct: 732 VGDNFGLWVSSFGANGKLEQNGYGKGDTKVFGGQVGIDKQFGDNLILGTALSYSKADVKF 791
Query: 118 TFYRLKEKYFIYG-DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
Y K +G + + G + G G G + S++ AK
Sbjct: 792 NRYGGKSDASNFGISLYGRLGNKDIPWYLQGRFGVGFVDSDVERDIILSSNDYSRAKINH 851
Query: 177 DGHGSSVVLGIGLD 190
+ S + G D
Sbjct: 852 NDKVYSGYVETGYD 865
>gi|161829720|ref|YP_001596261.1| hypothetical protein COXBURSA331_A0418 [Coxiella burnetii RSA 331]
gi|215918936|ref|NP_819354.2| outer membrane porin P1 [Coxiella burnetii RSA 493]
gi|166918877|sp|Q83EK8|OMP1_COXBU RecName: Full=Outer membrane protein P1; Flags: Precursor
gi|21309817|gb|AAM03442.1| outer membrane protein P1 [Coxiella burnetii]
gi|161761587|gb|ABX77229.1| putative outer membrane protein P1 [Coxiella burnetii RSA 331]
gi|206583821|gb|AAO89868.2| outer membrane porin P1 [Coxiella burnetii RSA 493]
Length = 252
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 53/191 (27%), Gaps = 29/191 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYN------------SLLPNGLGIELGHNIQLEDFV 103
G ++GL T+ T+ T S+ G ELG+ + ++
Sbjct: 35 GFHIGLGFGYKSYTYDQVGTVTVTTNGGTVLSVLHPVSASITQFGPVGELGYTFASDWWI 94
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-----------IYGMGGFG 152
G+ S + G + ++L +Y G+
Sbjct: 95 AGVKAQYQYDNVRSVHIMDAPLVGSNYSYRTRLGSHLTAMLLAGIKVNEANAVYLEAGYS 154
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + + + GIG + ++ L SY Y + S
Sbjct: 155 TVWGKTTLFGP------GPVAVSMKNRLNGGIAGIGWRHYFMNNVFLDLSYDYALYRSKS 208
Query: 213 VNNSNAKSDVE 223
+ + + +
Sbjct: 209 NSVTLSSATAS 219
>gi|255013086|ref|ZP_05285212.1| hypothetical protein B2_04218 [Bacteroides sp. 2_1_7]
Length = 317
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 53/183 (28%), Gaps = 19/183 (10%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
+I + T + NGL ++G++ + FG + K T+
Sbjct: 153 ANIGYAFVTSKFYLPPGGSGHPK---NGLDWQVGYDW-ISRSGFGAGLLYSGYKSSYTYS 208
Query: 121 RLKEKYF-IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ Y ++ ++ G G +S+ E
Sbjct: 209 GIDINVGLTYVAPQFVMKQIINRWIVEEKIGIGYFSYRESARGISE-----------SLS 257
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G +G +Y+++ + + + Y+ + N + + G+
Sbjct: 258 GVGYNFSLGAEYLLSKHVGVGLNIGYVGGSLPKQENVSYDKGDYSGLFRLTFD---AGVR 314
Query: 240 MHF 242
HF
Sbjct: 315 FHF 317
>gi|229527826|ref|ZP_04417217.1| hypothetical protein VCG_000900 [Vibrio cholerae 12129(1)]
gi|229334188|gb|EEN99673.1| hypothetical protein VCG_000900 [Vibrio cholerae 12129(1)]
Length = 182
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 61/191 (31%), Gaps = 35/191 (18%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA-------- 112
+ + L+ +R S + G+N Q F+ G++ +
Sbjct: 18 AYAGNSPYSFSLSTGFSRIDSPSSSDEAWVTQFGYNYQFSPFI-GLDLGYSGMIGNGAEM 76
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+K + F +G + +++ ++Y GG V + V DN +
Sbjct: 77 LNTQKQKIDVKVEGFYFGAFFEQ---PINNLTILYARGGLSQFKVKERYELGVIGDNRQ- 132
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
F G + +G + ++ ++L+ Y +++ ++
Sbjct: 133 ----FSGTNPYIGIGTKVQSSIDKSLALTMELSYY-----------------PLEQDYSS 171
Query: 232 HIASLGINMHF 242
++G F
Sbjct: 172 LSFTVGGQYRF 182
>gi|1332435|emb|CAA63037.1| outer membrane protein [Aeromonas salmonicida]
gi|1588799|prf||2209353B major outer membrane protein OmpAII
Length = 330
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 20/171 (11%), Positives = 48/171 (28%), Gaps = 26/171 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G+ Y D + L + G+N + + A
Sbjct: 28 WYTGIGAGWAYGH----DLNDFGKDADKDATALSLFGGYNF---NDYYAAELGYLYAGKA 80
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
++ + + A ++ + G ++ +
Sbjct: 81 GVDFKTQG-----ATLSGLARLPLNDIFSVFAEGGAYFNHVNGN--------------GN 121
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+G++ + G+GL ++ I + A YRY+ + V ++
Sbjct: 122 SDNGTAPLAGLGLTAKLSDLIDVQARYRYMWNLGDEQKTWETNMSVATLEL 172
>gi|170767786|ref|ZP_02902239.1| flagellar protein [Escherichia albertii TW07627]
gi|170123274|gb|EDS92205.1| flagellar protein [Escherichia albertii TW07627]
Length = 855
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 19/155 (12%), Positives = 47/155 (30%), Gaps = 7/155 (4%)
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF-----GINCHTTAAKDDSTFYRLK 123
++D + G G++LG++ ++ D + I+ + D + +K
Sbjct: 692 NANMSDGTYVDGSTNSDAWGFGVKLGYDWKVGDAGYVTPYGSISGLFQSGDDYNLSNDMK 751
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
Y + + G Y Y + + ++++ D
Sbjct: 752 VDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNDADVNGDSIDNGTEGS 811
Query: 184 VL--GIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ G+G + + S Y+ + S
Sbjct: 812 AVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 846
>gi|189423758|ref|YP_001950935.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
gi|189420017|gb|ACD94415.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
Length = 443
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 22/128 (17%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
G LG+N+ +++ + K D E GD++ SL+ Y
Sbjct: 51 FGFRLGYNLT-DNW--ALEGVVDYLKADLEGGGNIEMLRYGGDILYNF-MPKSSLVPYLA 106
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
GFGG + +S V G GL + ++ + +L A R + +
Sbjct: 107 AGFGGFNIDNS------------------KTRGIVNYGGGLKWFLSDNFALRADVRGLNY 148
Query: 209 HIHSVNNS 216
+ + +
Sbjct: 149 SMGKIYTN 156
>gi|47027932|gb|AAT08980.1| outer surface protein [Wolbachia endosymbiont of Pediculus humanus
capitis]
Length = 203
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 49/175 (28%), Gaps = 19/175 (10%)
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG- 137
+N + + +++D + + + + + +G
Sbjct: 37 DIHNPFKASSIAGGGAFGYKMDDIRVDVEGLYSQLNKNDVTGAAFNPDTVADSLTAISGL 96
Query: 138 ----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
Y + + Y G G AY+ + V SK + G+
Sbjct: 97 VNVYYDIAIEDMPITPYVGAGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKAGV 148
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA--SLGINMHF 242
Y V + L A RY + A + ++ + K G+ +F
Sbjct: 149 SYDVTPAVKLYAGARYFGSFGAHFDKDTAAASKDKGEFKVLYSTVGAEAGVAFNF 203
>gi|74312394|ref|YP_310813.1| outer membrane protein W [Shigella sonnei Ss046]
gi|73855871|gb|AAZ88578.1| putative outer membrane protein [Shigella sonnei Ss046]
gi|323168430|gb|EFZ54111.1| outer membrane protein W [Shigella sonnei 53G]
Length = 212
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDAGSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDYW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + S + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAG--YRF 212
>gi|83949962|ref|ZP_00958695.1| hypothetical protein ISM_02670 [Roseovarius nubinhibens ISM]
gi|83837861|gb|EAP77157.1| hypothetical protein ISM_02670 [Roseovarius nubinhibens ISM]
Length = 228
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 35/108 (32%), Gaps = 7/108 (6%)
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
++ + Y GG G A + + ++ G ++ G+ Y +N
Sbjct: 125 FTNERFTPYVGGGVGVA----IPHVDAQVIGATGRTYDYETTGIALRGIAGMKYSLNDKW 180
Query: 198 SLSASYRYIPHHIH---SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+L Y+ + + + + H ++G++ F
Sbjct: 181 ALFGEYQATWSDNDITIKADPAVVGQTDGKFGTELVTHAINVGVSYSF 228
>gi|302529935|ref|ZP_07282277.1| hypothetical protein SSMG_06317 [Streptomyces sp. AA4]
gi|302438830|gb|EFL10646.1| hypothetical protein SSMG_06317 [Streptomyces sp. AA4]
Length = 937
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A DD+ FY + + G++V++ GG G + ++ +
Sbjct: 666 YADDDADFYSTNLRDDALASFKAR-GFAVEARAFDPDGGAAGQPAHVRNGDRTVGNAGAA 724
Query: 172 AKGRFDGHGSSVVLGIGL 189
+ G + G G+
Sbjct: 725 GRDSCSYDGFAFFAGRGV 742
>gi|325142199|gb|EGC64621.1| opacity protein [Neisseria meningitidis 961-5945]
Length = 204
Score = 35.9 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 150 SHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 196
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 197 SLGMRYRF 204
>gi|261340065|ref|ZP_05967923.1| outer membrane protein OprG [Enterobacter cancerogenus ATCC 35316]
gi|288317992|gb|EFC56930.1| outer membrane protein OprG [Enterobacter cancerogenus ATCC 35316]
Length = 210
Score = 35.9 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 57/200 (28%), Gaps = 19/200 (9%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAK 114
G Y H + + + T+ + + G + +N QL F + +
Sbjct: 17 GAY--AHEAGEFFIRAGSATVRPTEGSDNVLGLGGFNVSNNTQLGLTFTYMATDNIGVEL 74
Query: 115 DDSTFYRLKEKYFIYGDVVLK------------AGYSVDSLLIYGMGGFGGAYVIDSSLE 162
+T +R + GD+ G S + Y G D
Sbjct: 75 LAATPFRHRVGTGPTGDIATVHHLPPTLMAQWYFGDSSSKVRPYIGAGVNYTTFFDEKFN 134
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ D V +GLDY++N D ++AS Y+ + +
Sbjct: 135 DTGKAAGLSDLSLKDSW--GVAGQVGLDYLINRDWLINASVWYMDIDTDVRFKAGGEQQS 192
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ S G F
Sbjct: 193 ISTRLDPWVFMFSAG--YRF 210
>gi|163754973|ref|ZP_02162094.1| hypothetical protein KAOT1_03127 [Kordia algicida OT-1]
gi|161325040|gb|EDP96368.1| hypothetical protein KAOT1_03127 [Kordia algicida OT-1]
Length = 190
Score = 35.9 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 13/109 (11%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA-----KGRFDGHGSSVVLGIGLDYMV 193
++ L Y G+ ++ S N+ + RF+ S + G G Y +
Sbjct: 90 TIPKLKPYVSIGYSFFSTSLNTANPQFSFNNPSPVVQPNGDRFNDSQSGINWGFGAAYDL 149
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S + + D N H ++G+ + F
Sbjct: 150 TEKFYVEVSADFTKLDLD--------GDTSGNRYNENIHTVNMGVGIRF 190
>gi|166979603|sp|A8F2W7|Y1308_RICM5 RecName: Full=Putative adhesin RMA_1308; Flags: Precursor
Length = 224
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 60/199 (30%), Gaps = 20/199 (10%)
Query: 57 NYVGLHISRL-YETHPLADTINRKTYNSLLPNGLGIELGH--------NIQLEDFVFG-I 106
Y+ + + T + N+ +P LG +G+ ++ L + G +
Sbjct: 29 WYLRIDTGAAMFNEEKDKATGVKLKSNTTVPVDLG--IGYYISENCRADLTLGTIIGGKL 86
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS----VDSLLIYGMGGFGGAYVIDSSLE 162
A T + + +L GY D ++ G G A V +
Sbjct: 87 KKSGAATNAPFTGTNVSASHKPTITRLLINGYVDLTNFDMFDVFAGAGVGPALVKEKITY 146
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ S N K + S L +G + + + +Y +I N
Sbjct: 147 NGITGLSSNTK---NRTNISYKLTLGTSAQIADGVKVELAYSWIDDGRTKSKNVIYPGTS 203
Query: 223 ERVD-RKGNAHIASLGINM 240
+ +H + GI
Sbjct: 204 VPTGGMRYQSHNLTAGIRF 222
>gi|121594631|ref|YP_986527.1| OmpW family protein [Acidovorax sp. JS42]
gi|222110780|ref|YP_002553044.1| ompw family protein [Acidovorax ebreus TPSY]
gi|120606711|gb|ABM42451.1| OmpW family protein [Acidovorax sp. JS42]
gi|221730224|gb|ACM33044.1| OmpW family protein [Acidovorax ebreus TPSY]
Length = 195
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 29/105 (27%), Gaps = 22/105 (20%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+ Y G S A + L +G DY ++ + SL
Sbjct: 111 FGAFKPYVGAGVNYTRF---------SSVKLPAGLDVKRNSWGGALQVGFDYALDKNWSL 161
Query: 200 SASYR--YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + YI + V K + + +G+ F
Sbjct: 162 NVDVKKVYIDTDVRGVGT-----------FKVDPVLFGVGVGYRF 195
>gi|45656437|ref|YP_000523.1| hypothetical protein LIC10539 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599672|gb|AAS69160.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 445
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 61/186 (32%), Gaps = 18/186 (9%)
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDF---VFGINCHTTAAKDDSTFYRLKEKY 126
+ + T R +N L G E NI + F FG + + ++ + + L E
Sbjct: 180 NSGSTTRLRYVWNRLTFELRGTETKQNIDVNGFQTLAFGTSSESESSGERTVNAILGEMN 239
Query: 127 FIYGDVVLKAGYSVDSLLIY---GMGGFGGAYVIDSSL-------EKVESDNSKNAKGRF 176
+ V + G++ + +GG + S D S+ + +
Sbjct: 240 TKFQKVSSRVGFTPYPHPVLDLQILGGIERMWTRTSQEVDSIGQKTGSGIDPSRISFREY 299
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI-HSVNNSNAKSDVERVDRKGNAHIAS 235
H LGIG ++ SL ++ S N+ + D + N
Sbjct: 300 SSHHKGYSLGIGFEWKFLKRFSLQGQILHLDMTSPSSFRNNEYRMDSSNQMLRLNQ---- 355
Query: 236 LGINMH 241
G++
Sbjct: 356 FGLDYR 361
>gi|16764403|ref|NP_460018.1| attachment/invasion protein [Phage Gifsy-2]
gi|62179566|ref|YP_215983.1| Gifsy-2 prophage attachment and invasion protein-like protein
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|169257312|ref|YP_001700688.1| bacteriophage virulence determinant; Lom homolog [Phage Gifsy-2]
gi|205352461|ref|YP_002226262.1| prophage protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|224584450|ref|YP_002638248.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|16419558|gb|AAL19977.1| Gifsy-2 prophage attachment and invasion protein homolog [Phage
Gifsy-2]
gi|62127199|gb|AAX64902.1| Gifsy-2 prophage attachment and invasion protein-like protein
[Phage Gifsy-2]
gi|205272242|emb|CAR37104.1| putative putative prophage protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|224468977|gb|ACN46807.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261246261|emb|CBG24066.1| attachment and invasion protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267992792|gb|ACY87677.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157588|emb|CBW17078.1| predicted bacteriophage protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312912033|dbj|BAJ36007.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085583|emb|CBY95362.1| Outer membrane protein X Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321223656|gb|EFX48719.1| Attachment invasion locus protein precursor [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322714034|gb|EFZ05605.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323129310|gb|ADX16740.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326627514|gb|EGE33857.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987936|gb|AEF06919.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 165
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 15/155 (9%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+G+ + Y+ L N G + +N + D FG T D
Sbjct: 17 IGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVN 76
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
Y K Y +++ Y + L Y M G ++ D+
Sbjct: 77 NYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNW--------------GNS 122
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ ++ G G+ +I+++ASY + +
Sbjct: 123 DNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDA 157
>gi|107103580|ref|ZP_01367498.1| hypothetical protein PaerPA_01004650 [Pseudomonas aeruginosa PACS2]
Length = 236
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 4/100 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
YG G D L ++ D + +G DYM+N + +
Sbjct: 139 PYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSW--GLAGELGFDYMLNEHALFNMAVW 196
Query: 205 YIPHHIHSVNNSNAKSDV--ERVDRKGNAHIASLGINMHF 242
Y+ + N + V +VD + + +G F
Sbjct: 197 YMDIDTKASINGPSALGVNKTKVDVDVDPWVYMIGFGYKF 236
>gi|297181298|gb|ADI17490.1| hypothetical protein [uncultured beta proteobacterium HF0130_04F21]
Length = 249
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 20/160 (12%), Positives = 52/160 (32%), Gaps = 13/160 (8%)
Query: 91 IELGHNI-----QLEDFVFGINCHTTAAKDDSTFYRLK--EKYFIYGDVVLKAGYSVDSL 143
I G+ + + F ++ + + K + LK E + Y ++++
Sbjct: 95 IYYGYRLSFTKDDFSNIEFALDFNHSKVKAKTIPAGLKRLEFTDGINTLTANVLYKLENV 154
Query: 144 -LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L + + V+ + + + + G + + +G + + + A
Sbjct: 155 SLSNFELEPYFGLGLGIAYPHVDVEGTNSKTYDYQYTGEAYQIMLGSKHQIADSWKIFAE 214
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YR + +++ + SLGI+ F
Sbjct: 215 YR-----VTYTPIEADLDGGGKIETDILNNQVSLGISYLF 249
>gi|170695730|ref|ZP_02886872.1| OmpW family protein [Burkholderia graminis C4D1M]
gi|170139335|gb|EDT07521.1| OmpW family protein [Burkholderia graminis C4D1M]
Length = 241
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 52/190 (27%), Gaps = 15/190 (7%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
P T + +G+ LG+ + +FV G S K
Sbjct: 52 GGSPTNITEPNTGATLSSADTIGLALGYFITDHIATEFVVGYPPSFDLNGSGSLEQFGKI 111
Query: 125 KYFIYGDVVLKAGYSVD----SLLIYGMGGFGGAYVIDS--SLEKVESDNSKNAKGRFDG 178
L Y + + Y G + D + +++
Sbjct: 112 GQAKQWSPTLLFKYYFNAPTATFRPYLGIGVSRIWFTDEKITNGAFQANVLHGPTSVTTD 171
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI----- 233
V +G Y N AS Y+P + N+ AK+ V ++ + I
Sbjct: 172 SSWEPVFNLGFTYAFNEHWFAGASVSYLPLSTTAKLNTQAKTPVGTLNVQSETKIKLNPI 231
Query: 234 -ASLGINMHF 242
+ I F
Sbjct: 232 VTYVNIGYRF 241
>gi|124431225|gb|ABN11263.1| outer surface protein precursor [Wolbachia endosymbiont of Ixodes
ricinus]
Length = 201
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 17/173 (9%)
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG- 137
+N L + + +++D + + + I + +G
Sbjct: 37 DIHNPLKASFIAGGGAFGYKMDDIRVDVEGVYSYLNKNDVTDAKFTPDTIADSLTAISGL 96
Query: 138 ----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
Y + + Y G G AY+ + V SK + G+
Sbjct: 97 VNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKAGV 148
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 149 SYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 201
>gi|85708814|ref|ZP_01039880.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
gi|85690348|gb|EAQ30351.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
Length = 378
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 50/209 (23%), Gaps = 40/209 (19%)
Query: 57 NYVGLHISRLYET------HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
YVGL N + L + G++ F +
Sbjct: 26 AYVGLEAGINDGNQIDIDLADTDPQTNAAFADPNLGFDADVIFGYDFGW----FRLEAEG 81
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGY---------------------SVDSLLIYGMG 149
+ + L F G + D + +Y G
Sbjct: 82 SYKNNGIDDVTLLNPTFTAGGQTTPVSFVSSSADINIISGMVNALIEFGDDDGIQVYAGG 141
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G G A V S ++ F + G VN + + YRY
Sbjct: 142 GAGIARVDLSIEPANFGSLIDDSSSDF-----AYQAIAGFRVPVNDRMDVGLKYRYFVVD 196
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGI 238
++ +N ++ +H +
Sbjct: 197 EFEIDAANGN----PIEVDCQSHSVMASL 221
>gi|83945223|ref|ZP_00957572.1| hypothetical protein OA2633_00610 [Oceanicaulis alexandrii
HTCC2633]
gi|83851393|gb|EAP89249.1| hypothetical protein OA2633_00610 [Oceanicaulis alexandrii
HTCC2633]
Length = 257
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 32/101 (31%), Gaps = 9/101 (8%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+Y G G A V + F G Y ++ + A
Sbjct: 166 PFALYAGAGVGIAEVKVDYSPSGVAIVDDKEMSAF------FQAMAGGSYAISDTTAFYA 219
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YRY + ++ + +D + ++HI LG+ F
Sbjct: 220 GYRYRAYKDAETDSVLIPAS---LDVENSSHILELGVRYSF 257
>gi|164430389|gb|ABY55524.1| outer surface protein precursor [Wolbachia endosymbiont of Sitobion
miscanthi]
Length = 183
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 17 DNSDYSPLKASFLAGGGAFGYKMDDIRVDVEGVYSYLNKNNVTDAKFTPDTIADSVTAIS 76
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 77 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 128
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 129 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 183
>gi|1332665|gb|AAB00857.1| outer membrane protein [Francisella tularensis]
Length = 336
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 46/144 (31%), Gaps = 9/144 (6%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ G++ + + + + Y+ ++ G G +
Sbjct: 75 GQWYLGVDANGLAGTPNSPSGAGANFTIGYNINKYFAVQYNQLVGRVFAGLGEGVVNFSN 134
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+++ + + +G GL + ++ ++ S YRYI + A
Sbjct: 135 NTMFTPYAAGGAGWANLAGQATGAWDVGGGLKFELSRNVQASVDYRYI--------QTMA 186
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
S++ + + ++ G+ F
Sbjct: 187 PSNISGANGRAGTNMIGAGLTWFF 210
>gi|330447717|ref|ZP_08311365.1| outer membrane transport family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491908|dbj|GAA05862.1| outer membrane transport family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 366
Score = 35.9 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y N + ++ ++ + N + V K + S+G+N F
Sbjct: 315 GMSYKFNDNWLVTGAWLQEHYEPKEYNTGATQL----VSVKNDGMAISVGVNYKF 365
>gi|323964657|gb|EGB60129.1| OmpW family protein [Escherichia coli M863]
Length = 238
Score = 35.9 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 136 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 193
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 194 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 238
>gi|302381877|ref|YP_003817700.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192505|gb|ADL00077.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 382
Score = 35.9 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 22/214 (10%), Positives = 53/214 (24%), Gaps = 30/214 (14%)
Query: 56 GNYVGLHISRL---YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
G Y + + T + LG+ ++ + +
Sbjct: 26 GWYGAVDAGYQIIDDINAESSVTGQNFNFEVNDGWAAFARLGYRFDA-NWRVELEGGYRS 84
Query: 113 AKDDSTFYRLKE---------------------KYFIYGDVVLKAGYSVDSLLIYGMGGF 151
+ + +V+ G + + G
Sbjct: 85 GDIGTVRAVSGTNGICNFTPATGPCFSPEGDIESTTLMANVIYDIGGEYWGVRPFVGLGV 144
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
G + + + + + GL Y V ++ +YRY+
Sbjct: 145 -GVNRVAADFAGRYRQGAGSIVADDSSTKFAAQAIAGLSYAVGDRANIDLTYRYL-TGDA 202
Query: 212 SVNNSNAKSDVERVDRKGN---AHIASLGINMHF 242
+ +A + +G+ +H +LG+ F
Sbjct: 203 EFDTVSAPVTRNQGTFEGDYDQSHTVTLGLRYAF 236
>gi|163637011|gb|ABY27326.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia nigroaenea]
Length = 201
Score = 35.9 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 56/180 (31%), Gaps = 17/180 (9%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
+ T + Y+ L + L +++D + + ++ I
Sbjct: 30 ITYTKDNSDYSPLKASFLAGGGAFGYKMDDIRVDVEGVYSYLNKNNVTDARFMPDTIADS 89
Query: 132 VVLKAG-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
V +G Y + + Y G G AY+ + V SK
Sbjct: 90 VTAISGLVNVYYDIAIEDMPITPYIGVGVGAAYISTPLKDAVNDQKSKFGFAGQ------ 143
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 144 --VKAGVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGYTVLYSTVGAEAGVAFNF 201
>gi|119900030|ref|YP_935243.1| outer membrane protein [Azoarcus sp. BH72]
gi|119672443|emb|CAL96357.1| outer membrane protein precursor [Azoarcus sp. BH72]
Length = 246
Score = 35.9 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 33/102 (32%), Gaps = 5/102 (4%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVNYDISLS 200
+ Y G + D L + N + + L +G+D + + +
Sbjct: 149 RIQPYVGAGLNYTWFFDEKLSSRQ---KANGFSDLKLDNSFGLALQLGMDVQITDKLLFN 205
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + +A V +VD + + +G+ F
Sbjct: 206 VAVWRMDIDTTATVRHSALGKV-KVDVDVDPWVYMVGVGYKF 246
>gi|26247587|ref|NP_753627.1| outer membrane protein W [Escherichia coli CFT073]
gi|26107989|gb|AAN80189.1|AE016760_48 Outer membrane protein W precursor [Escherichia coli CFT073]
Length = 238
Score = 35.9 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 136 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 193
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 194 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 238
>gi|42524775|ref|NP_970155.1| hypothetical protein Bd3416 [Bdellovibrio bacteriovorus HD100]
gi|39576985|emb|CAE78214.1| hypothetical protein Bd3416 [Bdellovibrio bacteriovorus HD100]
Length = 406
Score = 35.9 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 4/107 (3%)
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS---VVLGIGLDYMVN 194
++ L+ Y I + + E D +A + D + +G Y +
Sbjct: 256 FAGAYLVPYVSYLLNIPDNITARVPTDEDDTLPDANTKEDVTRTLGNIATVGGNAFYEFS 315
Query: 195 YDISLSASYRYIPHHIHSVNNS-NAKSDVERVDRKGNAHIASLGINM 240
+L A Y Y N + D+ ++ AH +
Sbjct: 316 DSWTLGAGYDYSTKEKDVYRGDRNTRYDLLALNSASTAHRVKAELTY 362
>gi|117921216|ref|YP_870408.1| outer membrane protein W [Shewanella sp. ANA-3]
gi|117613548|gb|ABK49002.1| OmpW family protein [Shewanella sp. ANA-3]
Length = 218
Score = 35.9 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + L Y G D+ + + +GLDY VN
Sbjct: 116 FGDAQSKLRPYVGVGVNYTNFFDNDFNAHGKSLGLSNLSM--STSWGLAAQVGLDYQVNK 173
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++AS Y + D D N + + + F
Sbjct: 174 NWLVNASVWYAQISTDVKFTAGT--DQYVFDTDINPWVYMVSVGYTF 218
>gi|85704644|ref|ZP_01035746.1| OmpW [Roseovarius sp. 217]
gi|85671052|gb|EAQ25911.1| OmpW [Roseovarius sp. 217]
Length = 257
Score = 35.9 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 12/104 (11%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
S+ Y G V ++ + + VL G+D + + L+
Sbjct: 164 GSIKPYIGAGPALVLV------VANNERGPATSFNLETYNPGFVLQAGVDIKLRNNWYLN 217
Query: 201 ASYR--YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A + ++ S +D +A +GI F
Sbjct: 218 ADIKKFFVDIDAKVTTAGGTVSGKASIDPI----VAGIGIGYRF 257
>gi|167763669|ref|ZP_02435796.1| hypothetical protein BACSTE_02047 [Bacteroides stercoris ATCC
43183]
gi|167698963|gb|EDS15542.1| hypothetical protein BACSTE_02047 [Bacteroides stercoris ATCC
43183]
Length = 173
Score = 35.9 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 30/89 (33%), Gaps = 18/89 (20%)
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ D ++ E + G + V LG G ++ + + +++ +RY
Sbjct: 103 FDMHDFDIDMDEGHVHIDDNGNHNECRFGVNLGAGAEFALPRNWAMNFEFRY-------- 154
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + + ++G F
Sbjct: 155 ----------QLVSDFDQGVINIGAAYRF 173
>gi|237710124|ref|ZP_04540605.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229455586|gb|EEO61307.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 1129
Score = 35.9 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 31/109 (28%), Gaps = 1/109 (0%)
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D+ ++A Y V+ L G+ G I + ++ +
Sbjct: 751 DWLTDLRIRASYGVNGTLPSDYFGYMGLSSISGGYLEQPGIQMSQIANPNLKWETNYNMN 810
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
IGLD+ ++ + Y Y + + + N
Sbjct: 811 IGLDFGFWDRLNFTIEY-YTRTTKNLLMDCPVSMTTGFSSYLMNIGEVK 858
>gi|156630178|gb|ABU89771.1| outer surface protein precursor [Wolbachia endosymbiont of
Anastrepha obliqua]
Length = 188
Score = 35.9 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 47/167 (28%), Gaps = 18/167 (10%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD----DSTFYRLKEKYFIYGDV 132
++ Y+ L P+ + +++D + + D TF +
Sbjct: 18 DKSDYSPLKPSFIAGGGAFGYKMDDIRVDVEGVYSYLNKNDVKDVTFDPANTIADSVTAI 77
Query: 133 VLKAGYSVD------SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D + Y G G AY+ V SK +
Sbjct: 78 SGLVNVYYDIAIEDMPITPYIGVGVGAAYISTPLEPAVNDQKSKFGFAGQ--------VK 129
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ Y V ++ L A RY + + + ++ AH
Sbjct: 130 AGVSYDVTPEVKLYAGARYFGSYGANFDGKKQILKIQPDRLLMQAHT 176
>gi|261756009|ref|ZP_05999718.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella suis bv. 3
str. 686]
gi|261745762|gb|EEY33688.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella suis bv. 3
str. 686]
Length = 66
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 21/73 (28%), Gaps = 9/73 (12%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+ L ++++ + A D + A W+G Y G +
Sbjct: 3 FKNLLGASLVAVITSTSAYAADAIV---------AQEPAPIAIAPSFSWAGAYFGGQVGY 53
Query: 66 LYETHPLADTINR 78
+ L + N
Sbjct: 54 GWGRAKLENRTNG 66
>gi|226228346|ref|YP_002762452.1| hypothetical protein GAU_2940 [Gemmatimonas aurantiaca T-27]
gi|226091537|dbj|BAH39982.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 793
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 25/181 (13%)
Query: 64 SRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
T PL + R Y N G+ G + VFG+ +
Sbjct: 282 GLSGSTAPLEPFVGRLKYAGEHNLPNLEVAGVRAGIDF---SSVFGVRG-FYWRGVNDDR 337
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
G+ L Y + G G D+ ++ + R D
Sbjct: 338 DGPAPVAGYGGEAQFNLSTGAG-LTPYLIVGAGQIDYKDNFVDSL-------GFSRSDKT 389
Query: 180 GSSVVLGIGLDYMVNYDISLSASYR-YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ +LG G + + + ++ S R Y+ + +N D+ + + + G+
Sbjct: 390 --AFILGGGASFRLTDRVRINGSIRDYVMTVDDNFDNVAGTGDLT------HNTMITAGL 441
Query: 239 N 239
Sbjct: 442 T 442
>gi|166979601|sp|Q4UJX4|Y1314_RICFE RecName: Full=Putative adhesin RF_1314; Flags: Precursor
Length = 224
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 62/199 (31%), Gaps = 20/199 (10%)
Query: 57 NYVGLHISRL-YETHPLADTINRKTYNSLLPNGLGIELGH--------NIQLEDFVFG-I 106
Y+ + + T + N+ +P LG +G+ ++ L + G +
Sbjct: 29 WYLRIDAGAAMFNKEKDKATGVKLKSNTTVPVDLG--IGYYISENFRADLTLGTIIGGKL 86
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS----VDSLLIYGMGGFGGAYVIDSSLE 162
A T + + +L GY D ++ G G A V +
Sbjct: 87 KKSGAATNAPFTGTNISASHKPTITRLLINGYVDLTNFDMFDVFAGAGVGPALVKEKITY 146
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH-IHSVNNSNAKSD 221
+ S N K + S L +G + + +Y +I S N +
Sbjct: 147 NGITGLSSNTK---NRTNISYKLTLGTSAQIADGVKAELAYSWIDDGRTKSKNVIYQGTS 203
Query: 222 VERVDRKGNAHIASLGINM 240
V + +H + GI
Sbjct: 204 VSTGGMRYQSHNLTAGIRF 222
>gi|229521439|ref|ZP_04410858.1| opacity protein-related protein [Vibrio cholerae TM 11079-80]
gi|229341537|gb|EEO06540.1| opacity protein-related protein [Vibrio cholerae TM 11079-80]
Length = 195
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 60/192 (31%), Gaps = 21/192 (10%)
Query: 62 HISRLYETHPLADTINRKTYNSLL-----PNGLGIELGHNIQLE------DFVFGINCHT 110
+++ + N+ T + L LGI G QL +VF +T
Sbjct: 14 QFGISFKSSDFGNDFNKDTSSDLKDIDEKFAMLGIHWGATKQLNEQQLTTRYVFLDYGNT 73
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
D+ + E+ V ++ + L Y G D V S +
Sbjct: 74 EITLFDAYNKLVVERQLAILGVGQNIQHNFND-LFYVKAGTEIGLYHDELDVSVRSLSRA 132
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ G + +G G+ M +L Y+Y + + + +
Sbjct: 133 DKSQSNTGALLAASVGTGV--MFTEHWNLELGYKYQYLASNKFDGLDNVNFT-------K 183
Query: 231 AHIASLGINMHF 242
A LG+N ++
Sbjct: 184 ASQVFLGVNYNY 195
>gi|218699963|ref|YP_002407592.1| outer membrane protein W [Escherichia coli IAI39]
gi|218369949|emb|CAR17724.1| outer membrane protein W [Escherichia coli IAI39]
Length = 212
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 212
>gi|30025845|gb|AAP04426.1| outer membrane protein P1 [Coxiella burnetii]
Length = 252
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 53/191 (27%), Gaps = 29/191 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYN------------SLLPNGLGIELGHNIQLEDFV 103
G ++GL T+ T+ T S+ G ELG+ + ++
Sbjct: 35 GFHIGLGFGYKSYTYDQVGTVTVTTNGGTVLSVLHPVSASITQFGPVGELGYTFASDWWI 94
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-----------IYGMGGFG 152
G+ S + G + ++L +Y G+
Sbjct: 95 AGVKAQYQYDNVRSVHIMDAPLVGSNYSYRTRLGSHLTAMLLAGIKVNEANAVYLEAGYS 154
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + + + GIG + ++ L SY Y + S
Sbjct: 155 TVWGKTTLFGP------GPVAVSMKNRLNGGIAGIGWRHYFMNNVFLDLSYDYALYRSKS 208
Query: 213 VNNSNAKSDVE 223
+ + + +
Sbjct: 209 NSVTLSSATAS 219
>gi|21674953|ref|NP_663018.1| outer surface protein, putative [Chlorobium tepidum TLS]
gi|21648183|gb|AAM73360.1| outer surface protein, putative [Chlorobium tepidum TLS]
Length = 192
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 25/98 (25%), Gaps = 18/98 (18%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y MGG G A S N G + LG G+ + + YR
Sbjct: 113 PYVMGGLGVADASIS---------GGNMSGSPSSTEFAWQLGAGVGIKAAKNTTFDLGYR 163
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ + + GI F
Sbjct: 164 YLSPSDAKFD---------GAKVSLASSNILAGIRYSF 192
>gi|329847556|ref|ZP_08262584.1| ompA family protein [Asticcacaulis biprosthecum C19]
gi|328842619|gb|EGF92188.1| ompA family protein [Asticcacaulis biprosthecum C19]
Length = 438
Score = 35.9 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG-RFDGHGSSVVLGIGLDYMVNYDISLS 200
L + G G V + + R ++ + GL + + +++
Sbjct: 155 RLHPFVGLGVGAVKVETDYTGTTSDPDYSTSYSIRSSKTAAAGQVIAGLAWAASDRLNID 214
Query: 201 ASYRYIPHHIHSVNN 215
+YRY+ + +
Sbjct: 215 LTYRYLEVGKANYDV 229
>gi|320158981|ref|YP_004191359.1| sulfate ABC transporter permease [Vibrio vulnificus MO6-24/O]
gi|319934293|gb|ADV89156.1| ABC-type sulfate transport system, permease component [Vibrio
vulnificus MO6-24/O]
Length = 350
Score = 35.9 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 26/59 (44%)
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+GL Y + ++S+ + YI ++ + + + G ++ SLG++ F
Sbjct: 292 TYSVGLKYSLLPNLSVYGEWLYIQSAKSVISGHFTQPQLPPNELVGEVNLFSLGLSFTF 350
>gi|254877305|ref|ZP_05250015.1| outer membrane associated protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843326|gb|EET21740.1| outer membrane associated protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 391
Score = 35.9 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 37/108 (34%), Gaps = 1/108 (0%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ FG++ + + + + Y+ ++ G G +
Sbjct: 73 GQWYFGVDANGLAGTPNSPSGAGANMTIGYNVNKYFAVQYNQLVGRVFAGLGEGVINFSN 132
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
S++ + + +G GL + ++ D+ +SA YRYI
Sbjct: 133 STMITPYAAGGAGWANLAGQATGAWDVGGGLKFELSRDVQVSADYRYI 180
>gi|191171069|ref|ZP_03032620.1| outer membrane protein W [Escherichia coli F11]
gi|227886314|ref|ZP_04004119.1| OmpW family bacterial porin [Escherichia coli 83972]
gi|301046919|ref|ZP_07194033.1| outer membrane protein W [Escherichia coli MS 185-1]
gi|306813720|ref|ZP_07447901.1| outer membrane protein W [Escherichia coli NC101]
gi|190908801|gb|EDV68389.1| outer membrane protein W [Escherichia coli F11]
gi|222033061|emb|CAP75801.1| Outer membrane protein W [Escherichia coli LF82]
gi|227836518|gb|EEJ46984.1| OmpW family bacterial porin [Escherichia coli 83972]
gi|300301145|gb|EFJ57530.1| outer membrane protein W [Escherichia coli MS 185-1]
gi|305852994|gb|EFM53439.1| outer membrane protein W [Escherichia coli NC101]
gi|312945891|gb|ADR26718.1| outer membrane protein W [Escherichia coli O83:H1 str. NRG 857C]
gi|324006088|gb|EGB75307.1| outer membrane protein W [Escherichia coli MS 57-2]
Length = 212
Score = 35.9 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 212
>gi|262040599|ref|ZP_06013838.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042062|gb|EEW43094.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 1524
Score = 35.9 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 44/178 (24%), Gaps = 16/178 (8%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL-----GIELG-------HNIQLEDF 102
+G YVG Y +A + + ++ G ++ L F
Sbjct: 1338 AGFYVGG-GGYSYLGQNVASNTSINANAGVYLRPYHDEYRQLQAGLSMSYMDYSKNLSYF 1396
Query: 103 VFGINCHTT---AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+G + + ++ + GY S +
Sbjct: 1397 TYGQGGYFSPQNYVSVSLPVSLTEKYDNWTMKLGGSVGYQSYSQDKSAYFPTNSEWQQTL 1456
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ G L G DY VN ++L Y ++ + +
Sbjct: 1457 ETAVSNGFAKEAYYSATSKSGIGYTLRAGADYKVNKQMTLGGQIGYDTFGDYNESTAG 1514
>gi|237712295|ref|ZP_04542776.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA]
gi|229453616|gb|EEO59337.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA]
Length = 368
Score = 35.9 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 27/98 (27%), Gaps = 7/98 (7%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG G + ++ G+GL + +N ++ R
Sbjct: 134 VYGFAGPMLSVAKSQNVTIKNDGTMVPEGESKARARIGASAGVGLKFNINKYWAIDVEAR 193
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + + + G++ F
Sbjct: 194 -------GAIAPSIFGNISSHRKAEGTGMLTAGVSYIF 224
>gi|212694389|ref|ZP_03302517.1| hypothetical protein BACDOR_03916 [Bacteroides dorei DSM 17855]
gi|212662890|gb|EEB23464.1| hypothetical protein BACDOR_03916 [Bacteroides dorei DSM 17855]
Length = 1129
Score = 35.9 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 31/109 (28%), Gaps = 1/109 (0%)
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D+ ++A Y V+ L G+ G I + ++ +
Sbjct: 751 DWLTDLRIRASYGVNGTLPSDYFGYMGLSSISGGYLEQPGIQMSQIANPNLKWETNYNMN 810
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
IGLD+ ++ + Y Y + + + N
Sbjct: 811 IGLDFGFWDRLNFTIEY-YTRTTKNLLMDCPVSMTTGFSSYLMNIGEVK 858
>gi|153832668|ref|ZP_01985335.1| outer membrane protein W [Vibrio harveyi HY01]
gi|148871013|gb|EDL69897.1| outer membrane protein W [Vibrio harveyi HY01]
Length = 213
Score = 35.9 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S Y G D + D + +G+DYM+N
Sbjct: 111 FGDSQSKFRPYVGAGLNYTIFFDEGFNSTGKGAGLSDLKLDDS--FGLAANVGVDYMIND 168
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + ++ D + N + + F
Sbjct: 169 KWFLNASAWYANIETEATYKAAG--AKQKTDVEINPWVFMISGGYKF 213
>gi|21430948|gb|AAM51156.1| outer surface protein precursor [Wolbachia endosymbiont of Formica
exsecta]
Length = 201
Score = 35.9 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 57/175 (32%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + + +++D + + + I + +
Sbjct: 35 DSSDYSPLKASFIAGGGAFGYKMDDIRVDVEGVYSYLNKNDVTGATFTPDTIANSLTAIS 94
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AYV E + G+ + G +
Sbjct: 95 GLVNVYYDIAIEDMPITPYVGVGVGAAYVSTPLKEAIN--------GQKNKFGFAYQAKA 146
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G++Y V +I L A RY + ++ +K D + A +G+ +F
Sbjct: 147 GVNYDVTPEIKLYAGARYFGSCGANFDSDASKKDKGGHAVFYSTVGAEVGVAFNF 201
>gi|16129217|ref|NP_415772.1| outer membrane protein W [Escherichia coli str. K-12 substr.
MG1655]
gi|24112655|ref|NP_707165.1| outer membrane protein W [Shigella flexneri 2a str. 301]
gi|30062779|ref|NP_836950.1| outer membrane protein W [Shigella flexneri 2a str. 2457T]
gi|82544289|ref|YP_408236.1| outer membrane protein W [Shigella boydii Sb227]
gi|89108102|ref|AP_001882.1| outer membrane protein W [Escherichia coli str. K-12 substr. W3110]
gi|110805260|ref|YP_688780.1| outer membrane protein W [Shigella flexneri 5 str. 8401]
gi|157160761|ref|YP_001458079.1| outer membrane protein W [Escherichia coli HS]
gi|170020379|ref|YP_001725333.1| outer membrane protein W [Escherichia coli ATCC 8739]
gi|170080933|ref|YP_001730253.1| outer membrane protein W [Escherichia coli str. K-12 substr. DH10B]
gi|188493754|ref|ZP_03001024.1| outer membrane protein W [Escherichia coli 53638]
gi|191166659|ref|ZP_03028487.1| outer membrane protein W [Escherichia coli B7A]
gi|194425898|ref|ZP_03058454.1| outer membrane protein W [Escherichia coli B171]
gi|194435057|ref|ZP_03067296.1| outer membrane protein W [Shigella dysenteriae 1012]
gi|194437032|ref|ZP_03069131.1| outer membrane protein W [Escherichia coli 101-1]
gi|209918496|ref|YP_002292580.1| outer membrane protein W [Escherichia coli SE11]
gi|218553808|ref|YP_002386721.1| outer membrane protein W [Escherichia coli IAI1]
gi|238900489|ref|YP_002926285.1| outer membrane protein W [Escherichia coli BW2952]
gi|253773746|ref|YP_003036577.1| outer membrane protein W [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161335|ref|YP_003044443.1| outer membrane protein W [Escherichia coli B str. REL606]
gi|256018497|ref|ZP_05432362.1| outer membrane protein W [Shigella sp. D9]
gi|293433569|ref|ZP_06661997.1| outer membrane protein W [Escherichia coli B088]
gi|297518042|ref|ZP_06936428.1| outer membrane protein W [Escherichia coli OP50]
gi|300819660|ref|ZP_07099851.1| outer membrane protein W [Escherichia coli MS 107-1]
gi|300822581|ref|ZP_07102720.1| outer membrane protein W [Escherichia coli MS 119-7]
gi|300904148|ref|ZP_07122020.1| outer membrane protein W [Escherichia coli MS 84-1]
gi|300919434|ref|ZP_07135936.1| outer membrane protein W [Escherichia coli MS 115-1]
gi|300926635|ref|ZP_07142413.1| outer membrane protein W [Escherichia coli MS 182-1]
gi|300927760|ref|ZP_07143325.1| outer membrane protein W [Escherichia coli MS 187-1]
gi|300951937|ref|ZP_07165739.1| outer membrane protein W [Escherichia coli MS 116-1]
gi|300955879|ref|ZP_07168217.1| outer membrane protein W [Escherichia coli MS 175-1]
gi|301304793|ref|ZP_07210899.1| outer membrane protein W [Escherichia coli MS 124-1]
gi|301327022|ref|ZP_07220308.1| outer membrane protein W [Escherichia coli MS 78-1]
gi|301647250|ref|ZP_07247069.1| outer membrane protein W [Escherichia coli MS 146-1]
gi|307137894|ref|ZP_07497250.1| outer membrane protein W [Escherichia coli H736]
gi|307309989|ref|ZP_07589639.1| OmpW family protein [Escherichia coli W]
gi|312971445|ref|ZP_07785620.1| outer membrane protein W [Escherichia coli 1827-70]
gi|331641815|ref|ZP_08342950.1| outer membrane protein W [Escherichia coli H736]
gi|331662668|ref|ZP_08363591.1| outer membrane protein W [Escherichia coli TA143]
gi|331667642|ref|ZP_08368506.1| outer membrane protein W [Escherichia coli TA271]
gi|331677035|ref|ZP_08377731.1| outer membrane protein W [Escherichia coli H591]
gi|71159606|sp|P0A915|OMPW_ECOLI RecName: Full=Outer membrane protein W; Flags: Precursor
gi|71159607|sp|P0A916|OMPW_SHIFL RecName: Full=Outer membrane protein W; Flags: Precursor
gi|43211|emb|CAA31922.1| unnamed protein product [Escherichia coli K-12]
gi|1742045|dbj|BAA14788.1| outer membrane protein W [Escherichia coli str. K12 substr. W3110]
gi|1787510|gb|AAC74338.1| outer membrane protein W [Escherichia coli str. K-12 substr.
MG1655]
gi|24051567|gb|AAN42872.1| putative outer membrane protein [Shigella flexneri 2a str. 301]
gi|30041027|gb|AAP16757.1| putative outer membrane protein [Shigella flexneri 2a str. 2457T]
gi|81245700|gb|ABB66408.1| putative outer membrane protein [Shigella boydii Sb227]
gi|110614808|gb|ABF03475.1| putative outer membrane protein [Shigella flexneri 5 str. 8401]
gi|157066441|gb|ABV05696.1| outer membrane protein W [Escherichia coli HS]
gi|169755307|gb|ACA78006.1| OmpW family protein [Escherichia coli ATCC 8739]
gi|169888768|gb|ACB02475.1| outer membrane protein W [Escherichia coli str. K-12 substr. DH10B]
gi|188488953|gb|EDU64056.1| outer membrane protein W [Escherichia coli 53638]
gi|190903308|gb|EDV63029.1| outer membrane protein W [Escherichia coli B7A]
gi|194415953|gb|EDX32219.1| outer membrane protein W [Escherichia coli B171]
gi|194416714|gb|EDX32844.1| outer membrane protein W [Shigella dysenteriae 1012]
gi|194424015|gb|EDX40003.1| outer membrane protein W [Escherichia coli 101-1]
gi|195182845|dbj|BAG66417.1| outer membrane protein W [Escherichia coli O111:H-]
gi|209911755|dbj|BAG76829.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218360576|emb|CAQ98135.1| outer membrane protein W [Escherichia coli IAI1]
gi|238861960|gb|ACR63958.1| outer membrane protein W [Escherichia coli BW2952]
gi|242377033|emb|CAQ31757.1| OmpW, outer membrane protein, subunit of Colicin S4 Transport
System [Escherichia coli BL21(DE3)]
gi|253324790|gb|ACT29392.1| OmpW family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253973236|gb|ACT38907.1| outer membrane protein W [Escherichia coli B str. REL606]
gi|253977450|gb|ACT43120.1| outer membrane protein W [Escherichia coli BL21(DE3)]
gi|260449613|gb|ACX40035.1| OmpW family protein [Escherichia coli DH1]
gi|281600680|gb|ADA73664.1| Outer membrane protein W [Shigella flexneri 2002017]
gi|291324388|gb|EFE63810.1| outer membrane protein W [Escherichia coli B088]
gi|300317256|gb|EFJ67040.1| outer membrane protein W [Escherichia coli MS 175-1]
gi|300403874|gb|EFJ87412.1| outer membrane protein W [Escherichia coli MS 84-1]
gi|300413492|gb|EFJ96802.1| outer membrane protein W [Escherichia coli MS 115-1]
gi|300417360|gb|EFK00671.1| outer membrane protein W [Escherichia coli MS 182-1]
gi|300448830|gb|EFK12450.1| outer membrane protein W [Escherichia coli MS 116-1]
gi|300464201|gb|EFK27694.1| outer membrane protein W [Escherichia coli MS 187-1]
gi|300524997|gb|EFK46066.1| outer membrane protein W [Escherichia coli MS 119-7]
gi|300527746|gb|EFK48808.1| outer membrane protein W [Escherichia coli MS 107-1]
gi|300839914|gb|EFK67674.1| outer membrane protein W [Escherichia coli MS 124-1]
gi|300846353|gb|EFK74113.1| outer membrane protein W [Escherichia coli MS 78-1]
gi|301074612|gb|EFK89418.1| outer membrane protein W [Escherichia coli MS 146-1]
gi|306909707|gb|EFN40201.1| OmpW family protein [Escherichia coli W]
gi|309701554|emb|CBJ00861.1| outer membrane protein W [Escherichia coli ETEC H10407]
gi|310336042|gb|EFQ01242.1| outer membrane protein W [Escherichia coli 1827-70]
gi|313649447|gb|EFS13878.1| outer membrane protein W [Shigella flexneri 2a str. 2457T]
gi|315060507|gb|ADT74834.1| outer membrane protein W [Escherichia coli W]
gi|315135893|dbj|BAJ43052.1| outer membrane protein W [Escherichia coli DH1]
gi|315254785|gb|EFU34753.1| outer membrane protein W [Escherichia coli MS 85-1]
gi|320181696|gb|EFW56607.1| Outer membrane protein W precursor [Shigella boydii ATCC 9905]
gi|320187664|gb|EFW62343.1| Outer membrane protein W precursor [Shigella flexneri CDC 796-83]
gi|323162382|gb|EFZ48237.1| outer membrane protein W [Escherichia coli E128010]
gi|323378929|gb|ADX51197.1| OmpW family protein [Escherichia coli KO11]
gi|323937754|gb|EGB34020.1| OmpW family protein [Escherichia coli E1520]
gi|323942371|gb|EGB38541.1| OmpW family protein [Escherichia coli E482]
gi|323947462|gb|EGB43466.1| OmpW family protein [Escherichia coli H120]
gi|323973503|gb|EGB68689.1| OmpW family protein [Escherichia coli TA007]
gi|324018963|gb|EGB88182.1| outer membrane protein W [Escherichia coli MS 117-3]
gi|324117550|gb|EGC11456.1| OmpW family protein [Escherichia coli E1167]
gi|327253946|gb|EGE65575.1| outer membrane protein W [Escherichia coli STEC_7v]
gi|331038613|gb|EGI10833.1| outer membrane protein W [Escherichia coli H736]
gi|331061090|gb|EGI33054.1| outer membrane protein W [Escherichia coli TA143]
gi|331065227|gb|EGI37122.1| outer membrane protein W [Escherichia coli TA271]
gi|331075724|gb|EGI47022.1| outer membrane protein W [Escherichia coli H591]
gi|332091647|gb|EGI96727.1| outer membrane protein W [Shigella boydii 5216-82]
gi|332094812|gb|EGI99856.1| outer membrane protein W [Shigella boydii 3594-74]
gi|332342849|gb|AEE56183.1| outer membrane protein OmpW [Escherichia coli UMNK88]
gi|332757909|gb|EGJ88236.1| outer membrane protein W [Shigella flexneri 4343-70]
gi|333005456|gb|EGK24974.1| outer membrane protein W [Shigella flexneri K-218]
gi|333007594|gb|EGK27072.1| outer membrane protein W [Shigella flexneri K-272]
gi|333019120|gb|EGK38410.1| outer membrane protein W [Shigella flexneri K-304]
gi|333019528|gb|EGK38808.1| outer membrane protein W [Shigella flexneri K-227]
Length = 212
Score = 35.9 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 212
>gi|332883079|gb|EGK03363.1| hypothetical protein HMPREF9456_02000 [Dysgonomonas mossii DSM
22836]
Length = 159
Score = 35.9 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 11/114 (9%), Positives = 35/114 (30%), Gaps = 2/114 (1%)
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
LG+ + E G+ ++ ++ ++ ++ + G
Sbjct: 30 LGYQTEFERLGLGVEGRY-FLTNNIRIAPGLTFLVPNNNITG-LDVDINVHYVFPIEGVQ 87
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G + + ++ + + +G G Y V + ++ ++Y
Sbjct: 88 GLALYPFVGGAMLNNRISVSGVSASDTSFGLNIGAGAQYDVTDNGYVNFEFKYT 141
>gi|237727625|ref|ZP_04558106.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229434481|gb|EEO44558.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 1129
Score = 35.9 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 31/109 (28%), Gaps = 1/109 (0%)
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D+ ++A Y V+ L G+ G I + ++ +
Sbjct: 751 DWLTDLRIRASYGVNGTLPSDYFGYMGLSSISGGYLEQPGIQMSQIANPNLKWETNYNMN 810
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
IGLD+ ++ + Y Y + + + N
Sbjct: 811 IGLDFGFWDRLNFTIEY-YTRTTKNLLMDCPVSMTTGFSSYLMNIGEVK 858
>gi|169796345|ref|YP_001714138.1| porin precurseur in catabolism of dicarboxylic acids [Acinetobacter
baumannii AYE]
gi|213156919|ref|YP_002318964.1| hypothetical protein AB57_1590 [Acinetobacter baumannii AB0057]
gi|215483806|ref|YP_002326031.1| hypothetical protein ABBFA_002129 [Acinetobacter baumannii
AB307-0294]
gi|301346106|ref|ZP_07226847.1| hypothetical protein AbauAB0_07665 [Acinetobacter baumannii AB056]
gi|301510883|ref|ZP_07236120.1| hypothetical protein AbauAB05_04871 [Acinetobacter baumannii AB058]
gi|301595050|ref|ZP_07240058.1| hypothetical protein AbauAB059_04551 [Acinetobacter baumannii
AB059]
gi|332851999|ref|ZP_08433866.1| hypothetical protein HMPREF0021_01439 [Acinetobacter baumannii
6013150]
gi|332871751|ref|ZP_08440191.1| hypothetical protein HMPREF0020_03846 [Acinetobacter baumannii
6013113]
gi|169149272|emb|CAM87155.1| porin precurseur in catabolism of dicarboxylic acids [Acinetobacter
baumannii AYE]
gi|213056079|gb|ACJ40981.1| hypothetical protein AB57_1590 [Acinetobacter baumannii AB0057]
gi|213988997|gb|ACJ59296.1| hypothetical protein ABBFA_002129 [Acinetobacter baumannii
AB307-0294]
gi|332729576|gb|EGJ60914.1| hypothetical protein HMPREF0021_01439 [Acinetobacter baumannii
6013150]
gi|332731221|gb|EGJ62519.1| hypothetical protein HMPREF0020_03846 [Acinetobacter baumannii
6013113]
Length = 438
Score = 35.9 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 42/140 (30%), Gaps = 18/140 (12%)
Query: 121 RLKEKYFIYGDVVLKAGYSVDS--LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
R K D+ + Y+ G + ++L + +
Sbjct: 220 RYDWKIDANNDLKVALEYTGSRVSAFPTLTGRYTFKQGPLTALAQGFINEKSTDVATATV 279
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYI-----------PHHIHSVNNSNAKSDVERVDR 227
S G L Y + S+ A+Y+YI + + + NA D +
Sbjct: 280 KKVSWGAGGSLKYQLTPQQSVQANYQYIVGDQKFMPYTTQSGLANSTSLNAAGDFSLNED 339
Query: 228 KGN-----AHIASLGINMHF 242
K + + ++G + F
Sbjct: 340 KTDLVMNKLNSINIGYSYKF 359
>gi|260770088|ref|ZP_05879021.1| hypothetical protein VFA_003152 [Vibrio furnissii CIP 102972]
gi|260615426|gb|EEX40612.1| hypothetical protein VFA_003152 [Vibrio furnissii CIP 102972]
Length = 204
Score = 35.9 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 48/187 (25%), Gaps = 23/187 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAKDD 116
YVG + +++ G + G+ V G+ +
Sbjct: 39 YVGAGLGVYNNAEIEYGSLSTNETGDFGDFGYNLLAGYEFNTHKVVKLGVELEYRHFGEV 98
Query: 117 STFYRLKEKYF-IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ +L + + +V K S D +Y G + +
Sbjct: 99 NFADQLDVEGDAFFINVRPKFIVSYDHADLYVALIAGLGTIDLDATAT-------QYGVS 151
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
++ G ++N + L YR + V+ D
Sbjct: 152 ASKSEAAFQYGAEFGVLLNEHVDLHVGYR--------------AAQVDVEDFDVTLSTGY 197
Query: 236 LGINMHF 242
GI HF
Sbjct: 198 AGIRYHF 204
>gi|241668774|ref|ZP_04756352.1| outer membrane associated protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 390
Score = 35.9 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 37/108 (34%), Gaps = 1/108 (0%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ FG++ + + + + Y+ ++ G G +
Sbjct: 72 GQWYFGVDANGLAGTPNSPSGAGANMTIGYNVNKYFAVQYNQLVGRVFAGLGEGVINFSN 131
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
S++ + + +G GL + ++ D+ +SA YRYI
Sbjct: 132 STMITPYAAGGAGWANLAGQATGAWDVGGGLKFELSRDVQVSADYRYI 179
>gi|238756333|ref|ZP_04617646.1| Outer membrane autotransporter barrel domain protein [Yersinia
ruckeri ATCC 29473]
gi|238705440|gb|EEP97844.1| Outer membrane autotransporter barrel domain protein [Yersinia
ruckeri ATCC 29473]
Length = 728
Score = 35.9 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 49/163 (30%), Gaps = 7/163 (4%)
Query: 82 NSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEKYFIYG-DVVLKAGYS 139
N GI G + + D +FG+ + Y + + + G+
Sbjct: 468 PGYQTNSYGINAGMDRRFNDEGLFGV--SFGYQNTNINIYNHGNSKDVNSYEAMAYTGWF 525
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS--SVVLGIGLDYMVNY-D 196
D I G + +++ N + D + + G+ + +N
Sbjct: 526 NDRYFINSNVNMGYNSNSSTRNIGIDTGYQGNTQATADYNSLQMGYQVSAGMIFDLNVIK 585
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ A Y Y + S + + +E + + G+
Sbjct: 586 LQPRAEYNYQWFRVDDYAESGSPASLEVDRQSYSVKHFGAGVT 628
>gi|254428115|ref|ZP_05041822.1| OmpW family [Alcanivorax sp. DG881]
gi|196194284|gb|EDX89243.1| OmpW family [Alcanivorax sp. DG881]
Length = 291
Score = 35.9 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 32/114 (28%), Gaps = 14/114 (12%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+ Y G + DS + + + V +G+D+ + L+A
Sbjct: 179 NFRPYAGLGVVYLFTYDSHVTNPILTEVGEPELEI-ENKFGWVGQVGVDWRMTDYWWLAA 237
Query: 202 SYRYIPHHIHSVNNSNAKSDVER-------------VDRKGNAHIASLGINMHF 242
++YI S + N + SLG+ F
Sbjct: 238 DFKYISVKDVSATVERTFIRAPGLPQYQYAEVGDAEFNADMNVYAFSLGVGFTF 291
>gi|59713655|ref|YP_206430.1| transporter [Vibrio fischeri ES114]
gi|59481903|gb|AAW87542.1| transporter [Vibrio fischeri ES114]
Length = 207
Score = 35.9 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 53/148 (35%), Gaps = 15/148 (10%)
Query: 100 EDFVFGINCHTT-AAKDDSTFYRLKEKYF-IYGDVVLKAGYSVDS-LLIYGMGGFGGAYV 156
F +G + A +++ F LK Y + A Y+ ++ I+G G
Sbjct: 70 NKFQYGAEVSYSTYATNENRFENLKFDYDGYNIAALGVAKYNFNNKWSIFGKAGAAYTVQ 129
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+S V + + +G+G Y + + +++AS+ +I +
Sbjct: 130 ELTSNVNVFNKKESKVLPK---------IGLGASYNITDNFAINASFEHI-FGDDLAEFT 179
Query: 217 NAKSDVERVDRKG--NAHIASLGINMHF 242
N ++ + D + +G+ F
Sbjct: 180 NKPNNHQLSDYTNVGSVSTMYIGMGYSF 207
>gi|307946321|ref|ZP_07661656.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307769985|gb|EFO29211.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 242
Score = 35.9 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 34/89 (38%)
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
GA ++ + + S N + +++ +G + Y + + + SY Y+
Sbjct: 40 AGAAFRSATSDTRDGGLSGNGRVEDIDFDTALAVGGRVGYQFSSALGVFLSYDYVGGDAR 99
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ S+ R D + +H+ ++
Sbjct: 100 WFASYAGISNRSRFDAQAQSHVVLANLSY 128
>gi|229522863|ref|ZP_04412277.1| hypothetical protein VIF_003431 [Vibrio cholerae TM 11079-80]
gi|229340080|gb|EEO05088.1| hypothetical protein VIF_003431 [Vibrio cholerae TM 11079-80]
Length = 182
Score = 35.9 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 24/191 (12%), Positives = 60/191 (31%), Gaps = 35/191 (18%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA-------- 112
+ + L+ +R S + G+N Q F+ G++ +
Sbjct: 18 AYAGNSPYSFSLSTGFSRIDSPSSSDEAWVTQFGYNYQFSPFI-GLDLGYSGMIGNGAEM 76
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+K + F +G + +++ ++Y GG V + DN +
Sbjct: 77 LNTQKQKIDVKVEGFYFGAFFEQ---PINNLTILYARGGLSQFKVKERYELGAIDDNRQ- 132
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
F G + +G + ++ ++L+ Y +++ ++
Sbjct: 133 ----FSGTNPYIGIGTKVQSSIDKSLALTMELSYY-----------------PLEQDYSS 171
Query: 232 HIASLGINMHF 242
++G F
Sbjct: 172 LSFTVGGQYRF 182
>gi|256819453|ref|YP_003140732.1| hypothetical protein Coch_0613 [Capnocytophaga ochracea DSM 7271]
gi|256581036|gb|ACU92171.1| hypothetical protein Coch_0613 [Capnocytophaga ochracea DSM 7271]
Length = 263
Score = 35.9 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 78/272 (28%), Gaps = 44/272 (16%)
Query: 5 GYGALFFVVFLSIVVPNHSL--AVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLH 62
+ F + L+++ ++ + E E ++ G GL+
Sbjct: 2 KKIIIIFAITLAVISTTYAQEVVTETTEEMTASSTQEPIVVQEKNPLSKRLFFGFRGGLN 61
Query: 63 ISRLYETHPLA------DTINRKTYNSLLPNGLGIELGH--NIQLEDFVFGINCHTTAA- 113
+S L + +T +R + + + G +G ++ D +F + +
Sbjct: 62 VSTLSFSEVYGAIKNDQNTFSRYNADLGMGSKAGFHIGVLAEYKVSDKLF-LEGGIAYSK 120
Query: 114 -------------KDDSTFYRLKEKYFIYGDVV----------LKAGYSVDSLLIYGMGG 150
T ++ Y I GDV + D G
Sbjct: 121 QGAKWKKITMTFIGTPPTINGIQLPYSISGDVKEASFILHQINIPLWLKYDISYFRPKVG 180
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
YV + + +++ S D + +G G++Y V +Y
Sbjct: 181 LNFGYVASIASKISQNNLSMAMSEDLD-NSFDFGMGFGMEYNVPSGFFFDINY------- 232
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ SN K + LG+ F
Sbjct: 233 -IIGLSNLSDADSVTQVKFKNRVLQLGVGYKF 263
>gi|298483513|ref|ZP_07001689.1| hemin receptor [Bacteroides sp. D22]
gi|298270270|gb|EFI11855.1| hemin receptor [Bacteroides sp. D22]
Length = 557
Score = 35.9 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 59/201 (29%), Gaps = 36/201 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G+ + Y T + Y + G+N+Q + + G +
Sbjct: 265 YLGVTLG-AYSVDYNKYTFYDEDYGNDE--------GYNLQSWNRIKG-----SGFDVKL 310
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+Y + + G ++ + + Y + A VI ++ V + +D
Sbjct: 311 GAIIRPFEYSPF-----RVGLAIHTPIFYSLDYKTSAQVISDVMDVVTGEIKGYDVRSWD 365
Query: 178 ------------GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ + L Y V ++L A Y Y + ++ S
Sbjct: 366 NLPGKGDMILPFDFQTPWTYNVSLGYTVGKSLALGAEYEYQDYSSMKFKDTEGNSSAYEF 425
Query: 226 DRKGNA-----HIASLGINMH 241
+ + LG+
Sbjct: 426 ENSTTSMLKGVSTVRLGLEYK 446
>gi|269960487|ref|ZP_06174859.1| hypothetical protein VME_12430 [Vibrio harveyi 1DA3]
gi|269834564|gb|EEZ88651.1| hypothetical protein VME_12430 [Vibrio harveyi 1DA3]
Length = 198
Score = 35.9 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 51/193 (26%), Gaps = 26/193 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKD 115
Y+G I +D +S GLGI +G +Q +F +
Sbjct: 25 WYIGADI-------LNSDLKVEGDSSSSSATGLGIAVGKELQYSENFKLALEGEYVYYGS 77
Query: 116 DSTFYRLKEKY------FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ ++ K Y Y A + ++ N
Sbjct: 78 FEEKASGSGNWAKVTVDGYGFNLNAKPKYQFSGTGFYVG---AVAGLGVMGVDFESKSNL 134
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
N + DG G + Y + +S YR +++ D
Sbjct: 135 ANLNVKTDGSDVGFNYGAEVGYEFASGLIISGGYR---VSTVTIDVEGGG------DIDF 185
Query: 230 NAHIASLGINMHF 242
+ G++ F
Sbjct: 186 DFDSLYAGVDYKF 198
>gi|119944471|ref|YP_942151.1| OmpW family protein [Psychromonas ingrahamii 37]
gi|119863075|gb|ABM02552.1| OmpW family protein [Psychromonas ingrahamii 37]
Length = 202
Score = 35.9 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 6/92 (6%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ GA + + + E + + + + GLD ++ + S Y+
Sbjct: 117 YVGAGLNYTFFFEEEGYGALSGTDVSVDNSLGGAVQAGLDVKLDEHWFANVSVWYMDI-- 174
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N++ + V ++ + A LG+ F
Sbjct: 175 ----NTDVHTAVGTINTDIDPVSAMLGLGYTF 202
>gi|302036245|ref|YP_003796567.1| hypothetical protein NIDE0876 [Candidatus Nitrospira defluvii]
gi|300604309|emb|CBK40641.1| conserved exported protein of unknown function, OmpA-like
[Candidatus Nitrospira defluvii]
Length = 208
Score = 35.6 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 50/181 (27%), Gaps = 15/181 (8%)
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDF-VFGINCHTTAAKDDSTFYRLKEKYF 127
DT + + G +LGH F FG+ + D +
Sbjct: 34 NIATLDTTDVGKLDLANNLAYGAKLGHYFDDRGFNWFGLEVDMYRSAPDIKQQNVPASTN 93
Query: 128 IY------GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+ G L + ++L+ + + + S
Sbjct: 94 RFLSQKVPGADFLVHSLAFNALVRVTGYQYKVEPYAGLGIGLNVGNISDGNFRPEASFAP 153
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
S + G+ Y + I+ Y+Y N ++ + A++ G+ H
Sbjct: 154 SFNVLAGIKYFMTPKIAPFIEYKY--------NFAHFSFSRSNITADYRANLFMFGVAFH 205
Query: 242 F 242
F
Sbjct: 206 F 206
>gi|85710362|ref|ZP_01041427.1| outer membrane protein OmpW, putative [Erythrobacter sp. NAP1]
gi|85689072|gb|EAQ29076.1| outer membrane protein OmpW, putative [Erythrobacter sp. NAP1]
Length = 224
Score = 35.6 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 36/134 (26%), Gaps = 6/134 (4%)
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
T + + + + V K + Y G ++ +
Sbjct: 95 TVSGFPPGTELVSDALLLPATVTGKVHFDAAGFKPYLGAGVAYFMW---LSDEPGAATLP 151
Query: 171 NAKGRFDGH-GSSVVLGIGLDYMV-NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
D VL G+D V N ++ + + + +E D
Sbjct: 152 LGVTDTDLTDEFGFVLQAGVDVPVGNDGFGVTLDAKRYFIGTTAQWFAGNTLVIET-DHN 210
Query: 229 GNAHIASLGINMHF 242
+ + S G++ F
Sbjct: 211 LDPWVLSAGVSYRF 224
>gi|148977690|ref|ZP_01814251.1| hypothetical protein VSWAT3_15324 [Vibrionales bacterium SWAT-3]
gi|145963058|gb|EDK28327.1| hypothetical protein VSWAT3_15324 [Vibrionales bacterium SWAT-3]
Length = 214
Score = 35.6 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 52/192 (27%), Gaps = 17/192 (8%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+ +VG + ++ K + I G IQ + G + T
Sbjct: 36 TDFFVGGGLGYHSAKAQISGP-GFKESKTAKGAAFHIRGGAYIQENHRITGT-INFTGDN 93
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D F Y L F + ++
Sbjct: 94 ELIDYEFAEGDVTTLDLRQTEFLVSYDYVHAL---NNDFSVFGGASTGFITNKATLDNTI 150
Query: 173 KGRFDGHGSSVVLG--IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G G + V G G+ Y + ++S YR++ S ++ + + N
Sbjct: 151 YGEDKGSETDFVFGLQAGVQYKIMKNVSADFQYRHMF-------ESYSEGSLIELSV-PN 202
Query: 231 AHIASLGINMHF 242
++ ++ F
Sbjct: 203 NSEFTVSVDYRF 214
>gi|212691276|ref|ZP_03299404.1| hypothetical protein BACDOR_00767 [Bacteroides dorei DSM 17855]
gi|237726434|ref|ZP_04556915.1| major outer membrane protein OmpA [Bacteroides sp. D4]
gi|265752003|ref|ZP_06087796.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA]
gi|212286444|dbj|BAG82875.1| majour outer mambrane protein OmpA [Bacteroides vulgatus]
gi|212666508|gb|EEB27080.1| hypothetical protein BACDOR_00767 [Bacteroides dorei DSM 17855]
gi|229434960|gb|EEO45037.1| major outer membrane protein OmpA [Bacteroides dorei 5_1_36/D4]
gi|263236795|gb|EEZ22265.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA]
Length = 357
Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 27/98 (27%), Gaps = 7/98 (7%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG G + ++ G+GL + +N ++ R
Sbjct: 123 VYGFAGPMLSVAKSQNVTIKNDGTMVPEGESKARARIGASAGVGLKFNINKYWAIDVEAR 182
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + + + G++ F
Sbjct: 183 -------GAIAPSIFGNISSHRKAEGTGMLTAGVSYIF 213
>gi|302384369|ref|YP_003820192.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194997|gb|ADL02569.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 385
Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 22/214 (10%), Positives = 53/214 (24%), Gaps = 30/214 (14%)
Query: 56 GNYVGLHISRL---YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
G Y + + T + LG+ ++ + +
Sbjct: 29 GWYGAVDAGYQIIDDINAESSVTGQNFNFEVNDGWAAFARLGYRFDA-NWRVELEGGYRS 87
Query: 113 AKDDSTFYRLKE---------------------KYFIYGDVVLKAGYSVDSLLIYGMGGF 151
+ + +V+ G + + G
Sbjct: 88 GDIGTVRAVSGTNGICNFTPATGPCFSPEGDIESTTLMANVIYDIGGEYWGVRPFVGLGV 147
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
G + + + + + GL Y V ++ +YRY+
Sbjct: 148 -GVNRVAADFAGRYRQGAGSIVADDSSTKFAAQAIAGLSYAVGDRANIDLTYRYL-TGDA 205
Query: 212 SVNNSNAKSDVERVDRKGN---AHIASLGINMHF 242
+ +A + +G+ +H +LG+ F
Sbjct: 206 EFDTVSAPVTRNQGTFEGDYDQSHTVTLGLRYAF 239
>gi|170682349|ref|YP_001743930.1| outer membrane protein W [Escherichia coli SMS-3-5]
gi|218704779|ref|YP_002412298.1| outer membrane protein W [Escherichia coli UMN026]
gi|293404798|ref|ZP_06648790.1| outer membrane protein W [Escherichia coli FVEC1412]
gi|298380439|ref|ZP_06990038.1| outer membrane protein [Escherichia coli FVEC1302]
gi|300896112|ref|ZP_07114667.1| outer membrane protein W [Escherichia coli MS 198-1]
gi|301019463|ref|ZP_07183634.1| outer membrane protein W [Escherichia coli MS 69-1]
gi|170520067|gb|ACB18245.1| outer membrane protein W [Escherichia coli SMS-3-5]
gi|218431876|emb|CAR12762.1| outer membrane protein W [Escherichia coli UMN026]
gi|291427006|gb|EFF00033.1| outer membrane protein W [Escherichia coli FVEC1412]
gi|298277881|gb|EFI19395.1| outer membrane protein [Escherichia coli FVEC1302]
gi|300359999|gb|EFJ75869.1| outer membrane protein W [Escherichia coli MS 198-1]
gi|300399250|gb|EFJ82788.1| outer membrane protein W [Escherichia coli MS 69-1]
Length = 212
Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 212
>gi|116251265|ref|YP_767103.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115255913|emb|CAK06994.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 340
Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 48/162 (29%), Gaps = 7/162 (4%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
Y + + + PN +G+ +G + F + I +D +
Sbjct: 173 AFYAGISVDELEDGYYKADEEPNNVGVAVGLGGKAGAFSYQITAGYDVDNEDGAVRAMGT 232
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV-------IDSSLEKVESDNSKNAKGRFD 177
G + L A Y+ Y + A V+ ++
Sbjct: 233 VDIGPGTLGLAAVYATGPSSYYTKAEWAVAAEYAIKATDKLKITPGVQYYSNYGITDDDF 292
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
G + +G+ +DY + + AS +Y+ + S
Sbjct: 293 DDGDAWKVGLTVDYQIVDNFYAKASVQYLDPEDDDDSTSGYF 334
>gi|8347009|emb|CAB93955.1| Opa protein [Neisseria subflava]
Length = 232
Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 27/225 (12%), Positives = 52/225 (23%), Gaps = 53/225 (23%)
Query: 56 GNYVGLHISRLYETHPLADTIN----RKTYNSLLPNGLGIELGHNIQLEDFVFGIN-CHT 110
G YV ++ YE + Y + + L ++ ++
Sbjct: 21 GPYVQADLTYAYEHITHDYPADNAKLFDDYRDIKTHSTHPRLSVGYDFGNWRIALDYARY 80
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKA--------------GYSVD---------SLLIYG 147
+ + + K + G V K GY + Y
Sbjct: 81 NTWEHGKHIHAEQTKTYANGAVTAKIEADNTDKGTFKAESGYGISAIYDFDTGTRFKPYA 140
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNA------------KGRFDGHGSSVVLGIGLDYMVNY 195
G + S + + N G+ +
Sbjct: 141 GVRVGLGKIRHSISLEGTKTTTINNIVRGPEKAYEPIHESRSIRRVGFGAVAGVGIDITP 200
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+++L YRY + + H ASLG+
Sbjct: 201 NLTLDTGYRYHYWGHLE-------------NTRFKTHEASLGMRY 232
>gi|37676891|ref|NP_937287.1| hypothetical protein VVA1231 [Vibrio vulnificus YJ016]
gi|37201435|dbj|BAC97257.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 350
Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 26/59 (44%)
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+GL Y + ++S+ + YI ++ + + + G ++ SLG++ F
Sbjct: 292 TYSVGLKYSLLPNLSVYGEWLYIQSAKSVISGHFTQPQLPPNELVGEVNLFSLGLSFTF 350
>gi|119774051|ref|YP_926791.1| OmpA/MotB [Shewanella amazonensis SB2B]
gi|119766551|gb|ABL99121.1| OmpA/MotB [Shewanella amazonensis SB2B]
Length = 368
Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 51/178 (28%), Gaps = 10/178 (5%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + R P + G+ + FG+ D
Sbjct: 29 WYVGGGVGINNYEPACDQKTMRSCGED-SPYAWDVFAGYLF---NDYFGVELGYR----D 80
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ DV K G ++ + + ++ + +N + +
Sbjct: 81 LGRAEWTDYANNLNDVGAK-GTTLGLVAFWPFASKWSLSAEAGAMNYLVYNNKRWGSNYY 139
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G + +G G+ Y ++ LSA Y RY N +S+ ++
Sbjct: 140 SDSGIAPFVGAGIGYNFTDNLKLSAKYRRYENLDEEKWNTLEMESNYWGLELSYRFGS 197
>gi|116623036|ref|YP_825192.1| hypothetical protein Acid_3940 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226198|gb|ABJ84907.1| hypothetical protein Acid_3940 [Candidatus Solibacter usitatus
Ellin6076]
Length = 210
Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 26/103 (25%), Gaps = 5/103 (4%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEK-VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
L ++ G G Y S + + + G G+ Y V + +
Sbjct: 111 RLRLFAAFGAGAKYYTTSGSTPKPQPVPAIAGLTTQSQWEPAFDFGGGVKYRVTDHLVVR 170
Query: 201 ASYR-YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
R YI + + V G+ F
Sbjct: 171 GDLRDYISFFPDRLIAPVGNAKQTGV---LQQFTPMFGVGYTF 210
>gi|283784188|ref|YP_003364053.1| outer membrane autotransporter [Citrobacter rodentium ICC168]
gi|282947642|emb|CBG87197.1| putative outer membrane autotransporter [Citrobacter rodentium
ICC168]
Length = 973
Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 47/155 (30%), Gaps = 7/155 (4%)
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG-----INCHTTAAKDDSTFYRLK 123
T +++ S G G++LG++ +L D + ++ + D L+
Sbjct: 810 TANMSNGQYVDGNTSADAWGFGLKLGYDWKLGDAGYLTPYGSVSGLFQSGDDYRLSNNLR 869
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
Y + + G Y Y + + ++++ D
Sbjct: 870 VDGQSYDSIRYELGVDAGYTFTYSDDQAMTPYFKLAYVYDDANNDAHVNGDSIDNGTEGS 929
Query: 184 VL--GIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ G+G + + S Y+ + S
Sbjct: 930 AVRVGLGTQFSFTKNFSAYTDVNYLGGGDVDQDWS 964
>gi|189218384|ref|YP_001939025.1| Opacity protein or related surface antigen [Methylacidiphilum
infernorum V4]
gi|189185242|gb|ACD82427.1| Opacity protein or related surface antigen [Methylacidiphilum
infernorum V4]
Length = 301
Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 56/211 (26%), Gaps = 54/211 (25%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA--- 112
G Y GL+ Y N N +LG N Q +V G+
Sbjct: 78 GLYAGLYGGAGYMD------TNNYNSNFSSGLFGNGQLGGNWQ---WVGGVKVGYQWKGW 128
Query: 113 --------------------------AKDDSTFYRLKEKYFIYGDVVLKAGYSVD----- 141
++ S F + G ++
Sbjct: 129 ELGDNLSGKGWYLMPAAEFDGFYIGNSQSGSGFTGVATGPMTIAAASTNTGMQLNMGIMT 188
Query: 142 -----------SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ Y G GG Y+ S++ + + + G G +
Sbjct: 189 INGLIKLVTPWKFVPYIGMGVGGYYLSASNISQSVAGHGIVNGASTTDGGFVFTPIAGSE 248
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
Y + ++S+ ++++ + +N A +
Sbjct: 249 YYLTKELSVFVEFKFLYMNNPILNYGTAIGN 279
>gi|83031689|gb|ABB96963.1| outer surface protein [Wolbachia endosymbiont of Bactrocera
dorsalis]
Length = 183
Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 17 DNSDYSPLKASFLAGGGAFGYKMDDIRVDVEGVYSYLNKNNVTDAKFTPDTIADSVTAIS 76
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V K +
Sbjct: 77 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKGKFGFAGQ--------VKA 128
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 129 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 183
>gi|27367176|ref|NP_762703.1| sulfate ABC transporter permease [Vibrio vulnificus CMCP6]
gi|27358744|gb|AAO07693.1| ABC-type sulfate transport system, permease component [Vibrio
vulnificus CMCP6]
Length = 350
Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 26/59 (44%)
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+GL Y + ++S+ + YI ++ + + + G ++ SLG++ F
Sbjct: 292 TYSVGLKYSLLPNLSVYGEWLYIQSAKSVISGHFTQPQLPPNELVGEVNLFSLGLSFTF 350
>gi|295442630|gb|ADG21239.1| outer surface protein [Wolbachia endosymbiont of Ceutorhynchus
obstrictus]
Length = 197
Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 13/171 (7%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG-DVVLK 135
+ Y+ L + + +++D + + D+ + ++
Sbjct: 35 DNNDYSPLKASFIAGGGAFGYKMDDIRVDVEGLYSWLNKDADVVGDTVADNLTAISGLVN 94
Query: 136 AGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
Y V + Y G G AY+ + NSK + G+ Y
Sbjct: 95 VYYDVAIEDMPITPYIGVGVGAAYISTPLKTAINDQNSKFGFAGQ--------VKAGVSY 146
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V +I L A RY + + ++ +K D + A G+ +F
Sbjct: 147 DVTPEIKLYAGARYFGSYGANFDSDTSKKDKGGHAVLYSTVGAEAGVAFNF 197
>gi|160875342|ref|YP_001554658.1| outer membrane protein [Shewanella baltica OS195]
gi|160860864|gb|ABX49398.1| outer membrane protein [Shewanella baltica OS195]
gi|315267537|gb|ADT94390.1| decaheme-associated outer membrane protein, MtrB/PioB family
[Shewanella baltica OS678]
Length = 667
Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 24/193 (12%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIE-LGHNIQL-----EDFVFGINCHTTAAKDDSTFY 120
+ T N Y+S L G++ G+N+QL N + D
Sbjct: 477 WLTVDFDAHYNNDNYDSTLIGLTGVKDYGYNVQLSAQLCNRLNVFANAGQQWIESDMAGS 536
Query: 121 RLKEKYFIYGDVVL-----KAGYSVDSLL---IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ Y +V G++ D L+ + G + A +L SD
Sbjct: 537 QAYASPDWYTNVDDEFIDFNIGFTYDGLMDDRLSIGGNYQFANSASDTLITTTSDQPYGD 596
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY-----IPHHIHSVNNSNAKSDVERVDR 227
+ + Y +N + L SY+Y + S + ++
Sbjct: 597 YYSYSHNLELY-----GRYALNERMGLKLSYQYERYYDTDYAEVSPYAVPGLVTLGELNH 651
Query: 228 KGNAHIASLGINM 240
NAH+ L +
Sbjct: 652 NYNAHLLMLTFSY 664
>gi|66866371|gb|AAY57835.1| outer membrane protein J [Moraxella catarrhalis]
Length = 192
Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 11/138 (7%)
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY--------GDVVLKAGY 138
GI G+N FG + + + GDV Y
Sbjct: 53 TAYGIYAGYNFDQN---FGAEAEFVGSDAKEFDVTVPAVVGVSPAVVLPVKGDVKSFGAY 109
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
+ + + + + A +S+ G+G+ + ++
Sbjct: 110 GTYRYNFINTPFYAKGKLGIAKTKVDVTGRKATASYSNKSDETSLAGGVGVGFKPLANVG 169
Query: 199 LSASYRYIPHHIHSVNNS 216
+ ASY Y+ ++++
Sbjct: 170 VEASYNYLSEDANAISLG 187
>gi|116621390|ref|YP_823546.1| hypothetical protein Acid_2271 [Candidatus Solibacter usitatus
Ellin6076]
gi|116224552|gb|ABJ83261.1| hypothetical protein Acid_2271 [Candidatus Solibacter usitatus
Ellin6076]
Length = 212
Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 13/154 (8%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
GL T P+++++ T G +G N Q + G + + + +
Sbjct: 27 GLAGGNFLNTVPVSNSVGTATAGFQTGAAFGGYVGFN-QYKH--IGGELRYSYLQSNLSL 83
Query: 120 YRLKEKYFIYGDVVLKAGYSV--------DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ G + GY V + ++ G G + E S+
Sbjct: 84 KSGGAEASFSGMSHV-IGYDVIFKTNRNQGKVQLFAAVGGGMKIFQGTGKEAAYQPLSQY 142
Query: 172 AKGRFDGHGSSV-VLGIGLDYMVNYDISLSASYR 204
+ +G G+ +++ + L +R
Sbjct: 143 GYFTKTQALKPMGSVGAGVKVALSHKVFLRTEFR 176
>gi|309789091|ref|ZP_07683685.1| outer membrane protein W [Shigella dysenteriae 1617]
gi|308923028|gb|EFP68541.1| outer membrane protein W [Shigella dysenteriae 1617]
Length = 207
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 105 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 162
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 163 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 207
>gi|254496536|ref|ZP_05109406.1| hypothetical protein LDG_0187 [Legionella drancourtii LLAP12]
gi|254354235|gb|EET12900.1| hypothetical protein LDG_0187 [Legionella drancourtii LLAP12]
Length = 263
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 43/138 (31%), Gaps = 11/138 (7%)
Query: 115 DDSTFYRLKEKYFI-----YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
D F K + + + + L + GG G ++ S ++
Sbjct: 125 SDPEFTNYKYNWDLTANLLLASAKVNL-FQYGMLAPFVNGGIGSSFNRTSDYKEKALAGV 183
Query: 170 ----KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+F + +G+G+D + + +S Y Y S + +
Sbjct: 184 TPRVSPQFSKFSTSEFAYQVGVGIDLQLTSQVLVSVGYNYQDLGQISSGPGKDTWSNQSL 243
Query: 226 DR-KGNAHIASLGINMHF 242
+ +++ + I+ F
Sbjct: 244 NPGSYHSNEILVSISYLF 261
>gi|239998202|ref|ZP_04718126.1| protein II [Neisseria gonorrhoeae 35/02]
gi|268594055|ref|ZP_06128222.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268547444|gb|EEZ42862.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
Length = 88
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 15/71 (21%)
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G V G+G+D ++L A YRY + +
Sbjct: 33 ESRSISSLGFGAVAGVGIDVA--PGLTLDAGYRYHYWGRLE-------------NTRFKT 77
Query: 232 HIASLGINMHF 242
H ASLG+ F
Sbjct: 78 HEASLGVRYRF 88
>gi|237744462|ref|ZP_04574943.1| outer membrane protein P1 [Fusobacterium sp. 7_1]
gi|229431691|gb|EEO41903.1| outer membrane protein P1 [Fusobacterium sp. 7_1]
Length = 339
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 52/196 (26%), Gaps = 34/196 (17%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFV----------------FGINCHTTAAKD 115
+ D + G G +LG N ++ D + G
Sbjct: 104 VKDGLVGDIDAKREAWGYGFQLGINYKVNDKLNLAARYDSRVKMNFKSKGSEHQLQTTDV 163
Query: 116 DSTFYRLKEKYF-IYGDVVLK--------AGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
L Y D ++ G S Y + G Y + S
Sbjct: 164 LGQTIGLTTFYPQYIIDSKVRRDLPAILSVGASYKITDNYLVSGTANYYFNRQARMDRVS 223
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ GR + + G +Y +N +L S Y + + ++ + + V
Sbjct: 224 AFGELEHGR--DYKDGWEVAFGNEYKLNNRFTLIGSINYARTGAKNASFNDTEYALNSV- 280
Query: 227 RKGNAHIASLGINMHF 242
G+ +F
Sbjct: 281 ------TLGAGVRYNF 290
>gi|4521300|dbj|BAA76315.1| surface protein [Wolbachia sp. group A]
gi|4521302|dbj|BAA76316.1| surface protein [Wolbachia sp. group A]
Length = 201
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 35 DNSDYSPLKASFLAGGGAFGYKMDDIRVDVEGVYSYLNKNNVTDARFTPDTIADSVTAIS 94
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 95 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 146
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 147 GVSYDVTPEVKLYAGARYFGSYGANFDKSVGEKDKGGHTVLYSTVGAEAGVAFNF 201
>gi|17981055|gb|AAL50822.1|AF452644_1 outer surface protein [Wolbachia endosymbiont of Trichogramma
cacoeciae]
Length = 193
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 27 DNSDYSPLKASFLAGGGAFGYKMDDIRVDVEGVYSYLNKNNVTDAKFTPDTIADSVTAIS 86
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 87 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 138
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 139 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 193
>gi|50084048|ref|YP_045558.1| putative long-chain fatty acid transport protein [Acinetobacter sp.
ADP1]
gi|49530024|emb|CAG67736.1| putative long-chain fatty acid transport protein [Acinetobacter sp.
ADP1]
Length = 488
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 27/107 (25%), Gaps = 2/107 (1%)
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
YS D G ++ + N +G+G+ Y +
Sbjct: 382 YSKDQWSANVGVGRKLNEQWAGNVSVGWDSGAGNPVTTLGPTEGYWNVGLGVQYSPAPNY 441
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG--INMHF 242
++ +Y + V + H + G I F
Sbjct: 442 FIAGGVKYFWLGDAKAQTGAQAGSSDYVAEFSDNHAIAYGMKIGYKF 488
>gi|193069962|ref|ZP_03050910.1| outer membrane protein W [Escherichia coli E110019]
gi|192956715|gb|EDV87170.1| outer membrane protein W [Escherichia coli E110019]
Length = 212
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEVGLSDLSLKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 168 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 212
>gi|290475281|ref|YP_003468169.1| putative outer membrane protein W; colicin S4 receptor; transport
protein [Xenorhabdus bovienii SS-2004]
gi|289174602|emb|CBJ81396.1| putative outer membrane protein W; colicin S4 receptor; transport
protein [Xenorhabdus bovienii SS-2004]
Length = 218
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 30/108 (27%), Gaps = 3/108 (2%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVN 194
G ++L Y G + D + +GLDY ++
Sbjct: 113 FGAKENNLRPYVGVGVNYTTFFSEKFNDNNATVEAAKLNSLDLKDSWGIAGQVGLDYQLD 172
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L+ S ++ + + + + + G+ F
Sbjct: 173 KNWILNTSLWWVNIETDVRFKAGDAEQKYKT--RLDPWVFMFGVGYKF 218
>gi|254671357|emb|CBA08793.1| Opacity protein and related surface antigens [Neisseria
meningitidis alpha153]
Length = 226
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 13/86 (15%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + + + G+ + + ++L YRY
Sbjct: 154 GGTPTIYNQGSTQNAYHESHSIRRLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE---- 209
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H SLG+ F
Sbjct: 210 ---------NTRFKTHEVSLGMRYRF 226
>gi|240124650|ref|ZP_04737536.1| outer membrane preprotein PIIc [Neisseria gonorrhoeae SK-92-679]
gi|268683224|ref|ZP_06150086.1| opacity protein [Neisseria gonorrhoeae SK-92-679]
gi|268623508|gb|EEZ55908.1| opacity protein [Neisseria gonorrhoeae SK-92-679]
Length = 190
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+ V ++L A YRY + + H A
Sbjct: 136 SRSISSLGFGAMAGVGIDVAPGLTLDAGYRYHYWGRLE-------------NTRFKTHEA 182
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 183 SLGVRYRF 190
>gi|164685775|ref|ZP_01947003.2| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
gi|212218145|ref|YP_002304932.1| outer membrane porin P1 [Coxiella burnetii CbuK_Q154]
gi|164601287|gb|EAX32357.2| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
gi|212012407|gb|ACJ19787.1| outer membrane porin P1 [Coxiella burnetii CbuK_Q154]
Length = 250
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 54/183 (29%), Gaps = 29/183 (15%)
Query: 56 GNYVGLHISRLYETHPLADTIN-------------RKTYNSLLPNGLGIELGHNIQLEDF 102
G ++GL T+ T+ + + + +G ELG+ + +
Sbjct: 35 GFHIGLGFGYKSYTYDQVGTVTVTTDGGTILSVLHPVSASITQFSPVG-ELGYTFASDWW 93
Query: 103 VFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGG 153
+ G+ + + + +L AG V+ +Y G+
Sbjct: 94 IAGVKAQYQYDNVRSVHIMDASLVGSTYRTRLGSHLTAMLLAGIKVNEANAVYLEAGYST 153
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + + + GIG + ++ L SY Y + S
Sbjct: 154 VWGKTTLFGP------GPVAVSMKNRLNGGIAGIGWRHYFMNNVFLDLSYDYALYRSKSN 207
Query: 214 NNS 216
+ +
Sbjct: 208 SVT 210
>gi|114045779|ref|YP_736329.1| outer membrane protein [Shewanella sp. MR-7]
gi|113887221|gb|ABI41272.1| outer membrane protein [Shewanella sp. MR-7]
Length = 667
Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 56/191 (29%), Gaps = 31/191 (16%)
Query: 74 DTINRKTYNSLLPNGLGIE----LGHNIQLEDFVFG------------INCHTTAAKDDS 117
D + +G+ G+N+QL + G I ++ +
Sbjct: 481 DFDAHYNNDDYDNTTIGLTEVKDYGYNVQLSAQLSGKLNVFASAGQQWIESDMAGSQAYA 540
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL---IYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ D+ G++ D L+ + G + A +L +D
Sbjct: 541 APDWYTNVDDEFIDL--NIGFTYDGLMDDRLSIGGNYQFANSASDTLITTTTDQPYGDYY 598
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRY-----IPHHIHSVNNSNAKSDVERVDRKG 229
+ + Y +N + L SY+Y + S + ++
Sbjct: 599 SYSHNLELY-----GRYALNERMGLKLSYQYERYYDTDYAEVSTYAIPGLVTLGELNHNY 653
Query: 230 NAHIASLGINM 240
NAH+ L +
Sbjct: 654 NAHLLMLTFSY 664
>gi|304396093|ref|ZP_07377975.1| OmpW family protein [Pantoea sp. aB]
gi|304356462|gb|EFM20827.1| OmpW family protein [Pantoea sp. aB]
Length = 210
Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D+ + D D + +GLDY +N D L+AS
Sbjct: 117 PYIGVGINYTTFYDADFNQTGRDAGLTDLSVKDSW--GMAGQVGLDYQINRDWMLNASLW 174
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ + + + ++ + + + G F
Sbjct: 175 YMDIDTEVKFKAGGEQ--QNINMRIDPWVFFFGAGYRF 210
>gi|197106279|ref|YP_002131656.1| outer membrane protein OmpW [Phenylobacterium zucineum HLK1]
gi|196479699|gb|ACG79227.1| outer membrane protein OmpW [Phenylobacterium zucineum HLK1]
Length = 215
Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
S+ N G G L G+D + +S + + + + + N +
Sbjct: 143 SEKDYNGFGLKVDDGFGYALQAGVDVALQGKLSANLDVKKVFFETDATDRFNG----VKS 198
Query: 226 DRKGNAHIASLGINMHF 242
+ + S G+ F
Sbjct: 199 KVNLDPWVVSAGLGYKF 215
>gi|187251408|ref|YP_001875890.1| long-chain fatty acid transport membrane protein [Elusimicrobium
minutum Pei191]
gi|186971568|gb|ACC98553.1| Membrane protein putatively involved in long-chain fatty acid
transport [Elusimicrobium minutum Pei191]
Length = 402
Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 7/106 (6%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
++ LI G G + L+ D SK + + + L G+++ V
Sbjct: 258 LSFTPTERLILEAGITGVFWSSYKQLKIDYDDLSKGSSNEYKHYRDVFRLSSGMEFAVTE 317
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + Y Y + + + + + HI S G+
Sbjct: 318 NWDIRFGYVY-DESPINPDFMDTMVPAD------DRHIFSTGLGYK 356
>gi|313159787|gb|EFR59143.1| hypothetical protein HMPREF9720_1560 [Alistipes sp. HGB5]
Length = 455
Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 49/185 (26%), Gaps = 30/185 (16%)
Query: 85 LPNGLGIELGHNIQ-LEDFVFGINCHTTAAKDDSTF--------------YRLKEKYFIY 129
+ ++LG + ++F GI D +F + +
Sbjct: 167 EGDVTEVKLGVGWELFKNFSLGIAAQYYWGDIDRSFVMTPTPITGDGSYSSTVGTDNYSI 226
Query: 130 GDVVLKAGYSVD------SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
+ + G + L G G + + + + + N+ + D ++
Sbjct: 227 SSIKGQIGVQWNAILNQKRALTLGAAYDFGGDLNPTVTKNIYVGDLYNSTVKGDTTHLAL 286
Query: 184 VL----GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD----RKGNAHIAS 235
VL G+ Y ++ Y Y + + + H
Sbjct: 287 VLPRQLSAGVFYQ-TSKWTMGVDYVYQDWGGRNRQTESTGVSGPDRSAFAVAYADTHTIK 345
Query: 236 LGINM 240
G+
Sbjct: 346 AGVEY 350
>gi|262279418|ref|ZP_06057203.1| fimbrial usher protein [Acinetobacter calcoaceticus RUH2202]
gi|262259769|gb|EEY78502.1| fimbrial usher protein [Acinetobacter calcoaceticus RUH2202]
Length = 812
Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 42/150 (28%), Gaps = 15/150 (10%)
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG----MGGFGGAYVIDSSLEK 163
+ + Y + ++ GYS L G G +
Sbjct: 342 VDVGVPRYNYGLYSNDYDDATFASGAIRYGYSNSLTLSGGAEASTDGLSNLGTGFAKNLF 401
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR-----YIPHHIHSV----- 213
+ + + +GL+ ++ +IS + SYR Y S
Sbjct: 402 GFGVINADIAASQYKDENGYSALVGLEGRISKNISFNTSYRKVFDNYFDLARVSQIRYLK 461
Query: 214 -NNSNAKSDVERVDRKGNAHIASLGINMHF 242
N ++A+ I GIN +F
Sbjct: 462 DNQTDAEPKNYLSYSALADEIFRAGINYNF 491
>gi|167626342|ref|YP_001676842.1| outer membrane associated protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596343|gb|ABZ86341.1| outer membrane associated protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 390
Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 37/108 (34%), Gaps = 1/108 (0%)
Query: 100 EDFVFGINCH-TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ FG++ + + + + Y+ ++ G G +
Sbjct: 72 GQWYFGVDANGLAGTPNSPSGAGANMTIGYNVNKYFAVQYNQLVGRVFAGLGEGVINFSN 131
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
S++ + + +G GL + ++ D+ +SA YRYI
Sbjct: 132 STMITPYAAGGAGWANLAGQATGAWDVGGGLKFELSRDVQVSADYRYI 179
>gi|164430397|gb|ABY55528.1| outer surface protein precursor [Wolbachia endosymbiont of Sitobion
miscanthi]
gi|164430399|gb|ABY55529.1| outer surface protein precursor [Wolbachia endosymbiont of Sitobion
miscanthi]
gi|167860449|gb|ACA05006.1| outer surface protein precursor [Wolbachia endosymbiont of Ascotis
selenaria]
gi|167860453|gb|ACA05008.1| outer surface protein precursor [Wolbachia endosymbiont of Clostera
anachoreta]
Length = 183
Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 17/175 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L + L +++D + + ++ I V +
Sbjct: 17 DNSDYSPLKASFLAGGGAFGYKMDDIRVDVEGVYSYLNKNNVTDAKFTPVTIADSVTAIS 76
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 77 GLVNVYYDIAIEDMPITPYVGVGAGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 128
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + + + S + D + A G+ +F
Sbjct: 129 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFNF 183
>gi|148263230|ref|YP_001229936.1| OmpW family protein [Geobacter uraniireducens Rf4]
gi|146396730|gb|ABQ25363.1| OmpW family protein [Geobacter uraniireducens Rf4]
Length = 224
Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 32/112 (28%), Gaps = 11/112 (9%)
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ + G + L G S + S + + ++ G G
Sbjct: 25 SIKGRLGVT-GRLGFMVPSGSEF--TKVSQYTIIPSFSVAVPETGKGKADTAFAGGGGFI 81
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + +L A + P+ + + + + SLG F
Sbjct: 82 YGITDNFALEADVTHTPNINYVF--------LGQKSVRITTTNVSLGFQYRF 125
>gi|262198151|ref|YP_003269360.1| hypothetical protein Hoch_4978 [Haliangium ochraceum DSM 14365]
gi|262081498|gb|ACY17467.1| hypothetical protein Hoch_4978 [Haliangium ochraceum DSM 14365]
Length = 228
Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 61/193 (31%), Gaps = 16/193 (8%)
Query: 57 NYVGLHISRLYETHPLADT---INRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTA 112
++G ++ ++ N TYN GL + L N +
Sbjct: 30 LHIGAQSGAVWSELFRSEPISSPNEATYNRRFFGGLALRLNTNAWDWLSLGAQLELQYDR 89
Query: 113 AKDDSTFYRLKEKYFIYG----DVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESD 167
++ ++++A +S Y G ++ + E +
Sbjct: 90 KGARIESGGVRVGDRYLNYLDVPLLVRATFSPSRYAKPYFAAGPRLGVLVGAEREDFNGN 149
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ +D V + +G+ +N +++ RY + V++++A+ +
Sbjct: 150 IQDQSDF-YDSVDFGVHVALGVGVQLNERLTVEIEGRY-DVGLSDVDSASAQPGLRNRSF 207
Query: 228 KGNAHIASLGINM 240
LG++
Sbjct: 208 -----FLVLGVDY 215
>gi|34558803|gb|AAQ75148.1| hypothetical protein [Alvinella pompejana epibiont 6C6]
Length = 278
Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D + +YG+ G+ + D ++ + + FDG S G G+DY V +IS+
Sbjct: 195 DKVNVYGLIGYSSVNMSDPVKGELHHGTASSP---FDGTNSGFSFGGGVDYSVTPNISVF 251
Query: 201 AS 202
Sbjct: 252 TD 253
>gi|332883998|gb|EGK04278.1| hypothetical protein HMPREF9456_01306 [Dysgonomonas mossii DSM
22836]
Length = 537
Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 43/148 (29%), Gaps = 8/148 (5%)
Query: 101 DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
D+V G +D Y+L+ + G Y + + + +
Sbjct: 333 DYVAGTVKSYDGREDAVFDYKLRTPDKWTFSMAGVIGTKAIISADYELTNYKN-NMKLFN 391
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI--PHHIHSVNNSNA 218
N + D + L +GL+Y S Y ++ P NN N
Sbjct: 392 RNSKTFSPDPNEYIKND-FKMASTLRVGLEYRFTSKFSGRVGYSWVQSPFDSKIKNNGNE 450
Query: 219 ----KSDVERVDRKGNAHIASLGINMHF 242
V + + H + G+ F
Sbjct: 451 VTTDPRPVTQYAFDADTHYITYGLGYQF 478
>gi|300689799|ref|YP_003750794.1| outer membrane protein, OmpW family [Ralstonia solanacearum PSI07]
gi|299076859|emb|CBJ49472.1| putative Outer membrane protein, OmpW family [Ralstonia
solanacearum PSI07]
Length = 241
Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 39/144 (27%), Gaps = 11/144 (7%)
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVE-- 165
+ + + V+ K G + Y G + D +
Sbjct: 98 IEGTDSFARYGEVGSAKQWSPAVLAKWYFGGADSKFRPYVGAGLNYTWFTDEKITNSAFQ 157
Query: 166 ----SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS---VNNSNA 218
+ + + VL +G Y + D + S Y+P + +N
Sbjct: 158 TQVLGNGFPSTSTVSTDGSLNPVLNVGATYAITKDWFVGLSVSYLPLKTTAKIDTTLANG 217
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ V K N + L + F
Sbjct: 218 QHAVTEAKIKINPIVTFLSVGYRF 241
>gi|163801613|ref|ZP_02195511.1| accessory colonization factor AcfA [Vibrio sp. AND4]
gi|159174530|gb|EDP59332.1| accessory colonization factor AcfA [Vibrio sp. AND4]
Length = 215
Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 21/176 (11%), Positives = 47/176 (26%), Gaps = 28/176 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVGL H + + N GI G + + + + +
Sbjct: 21 YVGLEYGFGATNHNFETSFKNEGVNLNPKMKDGIFGGFVGYSINDTWALELGYHQFELED 80
Query: 118 T-----------FYRLKEKYFIYGDVVLK-------AGYSV-DSLLIYGMGGFGGAYVID 158
+ EK V K Y++ + G
Sbjct: 81 SQSQPQGIAKIGGQNYHEKLEWDSSVKAKQISLAPVFNYTLSEKWTAKAKAGLTYTQYES 140
Query: 159 SSLEKVESDNSKN---------AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ + E ++ N + ++ +G +Y + +++ A+ +Y
Sbjct: 141 KASKSREYEHVFNDDIEMSKNLFHRSEKSNEFGAMVAVGAEYEIFPQLTVGANAKY 196
>gi|157964975|ref|YP_001499799.1| hypothetical protein RMA_1307 [Rickettsia massiliae MTU5]
gi|157844751|gb|ABV85252.1| hypothetical protein RMA_1307 [Rickettsia massiliae MTU5]
Length = 242
Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 23/196 (11%), Positives = 50/196 (25%), Gaps = 13/196 (6%)
Query: 57 NYVGLHISRLY---ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y+ L++ + H AD + G G + N++ + G +
Sbjct: 46 WYLKLNVGGVIFNKTKHKGADFKLKSNTGFTGEIGAGYYIMDNLRTD-LTIGTVASSHLK 104
Query: 114 KDDSTFYRLKEKYFIYGDVVLKA--GY------SVDSLLIYGMGGFGGAYVIDSSLEKVE 165
K + +V GY S+ + G +S + +
Sbjct: 105 KSKTYPDGASFSVKNKPTIVSVLFNGYVDFVDLSMFKVFTGAGVGAAFIKEKINSKDIKD 164
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ + L +G + V + Y + + D +
Sbjct: 165 GVTKTFNGTTKNKTNFAYQLSLGTSFEVAQGVKAELVYSWRDYGKTKNTTKTIDGDKVKF 224
Query: 226 -DRKGNAHIASLGINM 240
+ H G+
Sbjct: 225 GGTRYKGHNLMAGLRF 240
>gi|92112373|ref|YP_572301.1| OmpW [Chromohalobacter salexigens DSM 3043]
gi|91795463|gb|ABE57602.1| OmpW [Chromohalobacter salexigens DSM 3043]
Length = 209
Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 19/111 (17%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G + D L+ + D +G+D +++
Sbjct: 114 LGGTDARVQPYLGAGLNYTHFSDEHLDGGKLDL---------DDSWGAAAQLGIDLLIDD 164
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI----ASLGINMHF 242
+L+A+ Y+ S+A + + D HI G++ F
Sbjct: 165 HWALNAAAWYLDID------SDATATLAGNDYDAKIHIDPIVVMGGLSYRF 209
>gi|39995468|ref|NP_951419.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
gi|39982231|gb|AAR33692.1| OmpA domain protein [Geobacter sulfurreducens PCA]
Length = 429
Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 49/180 (27%), Gaps = 33/180 (18%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK 123
Y + + + G+ G+N+ + + +
Sbjct: 29 GAGYISPFVGGYTFDGAQHLKTRPTFGLRGGYNLDKN---WAAELLFGYVPTKQSRGQGN 85
Query: 124 EKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
+ + + + DS L + G G + + S E + N
Sbjct: 86 DADAYRYGLDVLYNFMPDSALVPFLAVGGGASTIDHSEGVSDEHEQYVN----------- 134
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G GL Y + + +L R+I + + + ++G+N F
Sbjct: 135 --YGGGLKYFLTDNFALRGDVRHI----------------YMLGPENHNFEYTVGLNYLF 176
>gi|86148858|ref|ZP_01067116.1| hypothetical outer membrane protein [Vibrio sp. MED222]
gi|85833351|gb|EAQ51551.1| hypothetical outer membrane protein [Vibrio sp. MED222]
Length = 221
Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 18/151 (11%), Positives = 47/151 (31%), Gaps = 14/151 (9%)
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G + Q+ V T + + + + + G+++ + Y +
Sbjct: 84 GGVSYQVITLVGMFEA-TAGSDLGFRHNGIYAEAAWRLPIR-RNGWAITPSIGYS---YN 138
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + S+ ++ FD +G+G V ++ ++ RY
Sbjct: 139 SKRLNNHLYGVSSSEAARTNLDEFDADWDGQYFIGLGGYLHVTPNVRVTGGVRYTNLEG- 197
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N+ ++ N +G+ F
Sbjct: 198 --DIENSPILESGINMAAN-----VGVAYVF 221
>gi|333004571|gb|EGK24095.1| outer membrane protein W [Shigella flexneri VA-6]
Length = 207
Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 105 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 162
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 163 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 207
>gi|300716960|ref|YP_003741763.1| outer membrane protein [Erwinia billingiae Eb661]
gi|299062796|emb|CAX59916.1| Outer membrane protein [Erwinia billingiae Eb661]
Length = 210
Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D+ + D + + + +GLDY + D L+AS
Sbjct: 117 PYMGIGVNYTMFYDNDFNQTGRDAGLSNLSVKNSW--GLAGQVGLDYQLTPDWMLNASVW 174
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ ++ + + +D + N + G F
Sbjct: 175 YMDIDTKV--GFDSPAGHQSIDTRINPVVFFFGAGYRF 210
>gi|294139315|ref|YP_003555293.1| hypothetical protein SVI_0544 [Shewanella violacea DSS12]
gi|293325784|dbj|BAJ00515.1| hypothetical protein [Shewanella violacea DSS12]
Length = 2806
Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 21/201 (10%), Positives = 51/201 (25%), Gaps = 29/201 (14%)
Query: 37 FNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLL----------- 85
++ E +G ++ S L+ +D +
Sbjct: 2602 TQVKADSAPQVIPEDVSQTGFFI----SGLFARSQGSDNTGDINQFLVDAGLNAQVFEID 2657
Query: 86 --PNGLGIELGHNIQLEDFVFGIN--------CHTTAAKDDSTFYRLKEKYFIYGDVVLK 135
+G + G+ + + DD + F
Sbjct: 2658 DSTSGWKLGAGYAFT-PSWSVALEYIDLGEVSVRIKGVTDDPEAFYATASQFHPDSAKG- 2715
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSL--EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
G ++ + ++ + D + G+S+ GIG++Y +
Sbjct: 2716 LGLNLGYRYQFITDVSALLHLGLFHWQADFTSYDIDTQQVATSEDDGNSLYGGIGVEYAL 2775
Query: 194 NYDISLSASYRYIPHHIHSVN 214
+I S + + S +
Sbjct: 2776 TQNIRFSVQWSHFSLDEQSRD 2796
>gi|269215322|ref|ZP_05988130.2| opacity protein opA58 [Neisseria lactamica ATCC 23970]
gi|269207797|gb|EEZ74252.1| opacity protein opA58 [Neisseria lactamica ATCC 23970]
Length = 236
Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 15/83 (18%)
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + + G V G+G+D + ++L YRY
Sbjct: 169 NGGLKDVHPPVHESHSIRRVGFGAVAGVGID--ITPKLTLDTGYRYHYWGHLE------- 219
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 220 ------NTRFKTHEASLGVRYRF 236
>gi|194099324|ref|YP_002002424.1| outer membrane preprotein PIIc [Neisseria gonorrhoeae NCCP11945]
gi|194100246|ref|YP_002002795.1| outer membrane preprotein PIIc [Neisseria gonorrhoeae NCCP11945]
gi|193934614|gb|ACF30438.1| outer membrane preprotein PIIc [Neisseria gonorrhoeae NCCP11945]
gi|193935536|gb|ACF31360.1| outer membrane preprotein PIIc [Neisseria gonorrhoeae NCCP11945]
Length = 230
Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 15/92 (16%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G S K+ + + G V G+G+D ++L A YRY
Sbjct: 154 PSGGGAKTSVPSKMPPKPAYHENRSISSLGFGAVAGVGIDVA--PGLTLDAGYRYHYWGR 211
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 212 LE-------------NTRFKTHEASLGMRYRF 230
>gi|585612|sp|Q05811|OM3A_RHILV RecName: Full=Outer membrane protein IIIA; Short=OMPIIIA; Flags:
Precursor
Length = 366
Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 48/174 (27%), Gaps = 4/174 (2%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
P PN +G+ G F + + +D +
Sbjct: 187 TFTPGVIPGTTDFTADDGPNNVGVAFGIGGTAGAFSYQVTGGWDVDNEDGAIRAMGTVEI 246
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG----RFDGHGSSV 183
G L YS Y + A G FDG G +
Sbjct: 247 GPGTFGLAGVYSSGPNSYYSSAEWAVAAEYAIKATDKLKITPGRWHGHVPEDFDGLGDAW 306
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+G+ +DY + + AS +Y+ + S + R + +A +G
Sbjct: 307 KVGLTVDYQIVENFYAKASVQYLDPQDGEDSTSGYFACSVRSNHLVDAPGLRIG 360
>gi|88703953|ref|ZP_01101668.1| secreted protein [Congregibacter litoralis KT71]
gi|88701780|gb|EAQ98884.1| secreted protein [Congregibacter litoralis KT71]
Length = 220
Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 40/159 (25%), Gaps = 19/159 (11%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
I +D +N + + G+G G+N + + + A D+
Sbjct: 37 IGLYLTGSESSDGLNESSVDIDSGYGIGFSAGYNFTQ-NLALRFDGSWSRADYDAVLDTE 95
Query: 123 KEK--------YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS----- 169
E G Y G G Y+ + + S
Sbjct: 96 DEGLVFINHRLTTFTGQFNGVWNLLDGPFTPYVQAGIGWTYLDSNVADGPPSTGCWWDPW 155
Query: 170 -----KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
N + S +G GL Y + + +
Sbjct: 156 WGYICSNFYSTYAETNFSWNIGAGLRYEFGRGMFVRGGW 194
>gi|113970936|ref|YP_734729.1| outer membrane protein W [Shewanella sp. MR-4]
gi|114048160|ref|YP_738710.1| outer membrane protein W [Shewanella sp. MR-7]
gi|113885620|gb|ABI39672.1| OmpW family protein [Shewanella sp. MR-4]
gi|113889602|gb|ABI43653.1| OmpW family protein [Shewanella sp. MR-7]
Length = 215
Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 31/107 (28%), Gaps = 5/107 (4%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + L Y G D+ + + +GLDY VN
Sbjct: 114 FGDAQSKLRPYVGVGVNYTNFFDNEFTNDLDGALTDLSMS---TSWGLAAQVGLDYQVNK 170
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++AS Y + V D ++ S+G F
Sbjct: 171 NWLVNASVWYAQISSDVKFKLAGDTVVIDTDINPWVYMVSVG--YTF 215
>gi|261417485|ref|YP_003251168.1| hypothetical protein Fisuc_3106 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373941|gb|ACX76686.1| hypothetical protein Fisuc_3106 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 365
Score = 35.6 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 33/117 (28%), Gaps = 12/117 (10%)
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY 138
+ + NG G G N + F + S+ L GY
Sbjct: 208 GDISDKVKNGFGFYGGTNWYWNNVSFEGQINAHFNDVRSSDTLHFSNLGW----NLNVGY 263
Query: 139 SVDSL--LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ L Y G + ++ ++ + D + V G G+ Y +
Sbjct: 264 YFRDISLLCYLTTGVEADFYGENKSNDDKN------RSSMDSYQVYPVYGAGILYDM 314
>gi|212286442|dbj|BAG82874.1| majour outer mambrane protein OmpA [Bacteroides vulgatus]
Length = 357
Score = 35.6 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 27/98 (27%), Gaps = 7/98 (7%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG G + ++ G+GL + +N ++ R
Sbjct: 123 VYGFAGPMLSVAKSQNVTIKNDGTMVPEGESKARARIGASAGVGLKFNINKYWAIDVEAR 182
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + + + G++ F
Sbjct: 183 -------GAIAPSIFGNISSHRKAEGTGMLTAGVSYIF 213
>gi|163750646|ref|ZP_02157883.1| OmpA family protein [Shewanella benthica KT99]
gi|161329641|gb|EDQ00632.1| OmpA family protein [Shewanella benthica KT99]
Length = 388
Score = 35.6 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 54/180 (30%), Gaps = 10/180 (5%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+ YVG + P D K+ P + G+ + F +
Sbjct: 48 TPWYVGGGLGVN-NYEPNCDMKTMKSCGKDDPYAWDVFAGYLF---NDYFAVELGYRDLG 103
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ + K G G S+ + + + ++ S+N +
Sbjct: 104 -RAEWVDYANKMNDVGAK----GLSLGVVGFWPIANRWSLSAEAGAMNYTLSNNKEYGSE 158
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ G + +G G+ Y + ++ L A Y RY N +S+ ++
Sbjct: 159 YYSDSGIAPYIGTGIGYNITENLKLQAKYRRYENLDEDKWNTLAMESNYWGLELSYRFGT 218
>gi|91203588|emb|CAJ71241.1| Conserved Hypothetical Protein [Candidatus Kuenenia
stuttgartiensis]
Length = 429
Score = 35.6 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 52/182 (28%), Gaps = 24/182 (13%)
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDV 132
+ +N + GLG+ F GI+ D Y ++
Sbjct: 104 STVFITHKFNDKVSAGLGV-------FNSFGLGID----WGDDWEGRYIATNSELQTFNI 152
Query: 133 VLKAGYSVDSLLIYGMG-GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
Y + + + G + + +A +FDG G + +G Y
Sbjct: 153 NPVVSYQIMPNIAFAAGVNYVLLDTTLEKQINLSPYGLSDAGQQFDGDGDGIGYNLGFIY 212
Query: 192 MVNYDISLSASYRY---IPH-HIHSVNNSNAKSDVERVDRKGN--------AHIASLGIN 239
+N DIS+ SYR + + N + + A +GI
Sbjct: 213 DINEDISIGTSYRSKIEVDIDGDADFDLPNGTPSLISTLFQNTGGNADLTLPQQAHVGIT 272
Query: 240 MH 241
Sbjct: 273 YR 274
>gi|110641486|ref|YP_669216.1| outer membrane protein W [Escherichia coli 536]
gi|300971741|ref|ZP_07171610.1| outer membrane protein W [Escherichia coli MS 200-1]
gi|300982424|ref|ZP_07176121.1| outer membrane protein W [Escherichia coli MS 45-1]
gi|110343078|gb|ABG69315.1| outer membrane protein W precursor [Escherichia coli 536]
gi|300309344|gb|EFJ63864.1| outer membrane protein W [Escherichia coli MS 200-1]
gi|300408762|gb|EFJ92300.1| outer membrane protein W [Escherichia coli MS 45-1]
gi|307553316|gb|ADN46091.1| outer membrane protein W [Escherichia coli ABU 83972]
gi|324011261|gb|EGB80480.1| outer membrane protein W [Escherichia coli MS 60-1]
Length = 228
Score = 35.6 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 126 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 183
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 184 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 228
>gi|15600965|ref|NP_232595.1| hypothetical protein VCA0195 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|121586718|ref|ZP_01676501.1| hypothetical protein VC274080_A0221 [Vibrio cholerae 2740-80]
gi|121727735|ref|ZP_01680823.1| hypothetical protein VCV52_A0209 [Vibrio cholerae V52]
gi|147672001|ref|YP_001215917.1| hypothetical protein VC0395_1081 [Vibrio cholerae O395]
gi|153215148|ref|ZP_01949846.1| hypothetical protein A55_A0189 [Vibrio cholerae 1587]
gi|153816767|ref|ZP_01969434.1| hypothetical protein A5C_A0240 [Vibrio cholerae NCTC 8457]
gi|153823197|ref|ZP_01975864.1| hypothetical protein A5E_A0227 [Vibrio cholerae B33]
gi|227811819|ref|YP_002811829.1| hypothetical protein VCM66_A0191 [Vibrio cholerae M66-2]
gi|229506639|ref|ZP_04396148.1| hypothetical protein VCF_001861 [Vibrio cholerae BX 330286]
gi|229510563|ref|ZP_04400043.1| hypothetical protein VCE_001971 [Vibrio cholerae B33]
gi|229514694|ref|ZP_04404155.1| hypothetical protein VCB_002346 [Vibrio cholerae TMA 21]
gi|229517305|ref|ZP_04406750.1| hypothetical protein VCC_001326 [Vibrio cholerae RC9]
gi|229526180|ref|ZP_04415584.1| hypothetical protein VCA_000295 [Vibrio cholerae bv. albensis
VL426]
gi|229605116|ref|YP_002875820.1| hypothetical protein VCD_000054 [Vibrio cholerae MJ-1236]
gi|254850607|ref|ZP_05239957.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255745994|ref|ZP_05419941.1| hypothetical protein VCH_002360 [Vibrio cholera CIRS 101]
gi|262162168|ref|ZP_06031183.1| hypothetical protein VIG_003349 [Vibrio cholerae INDRE 91/1]
gi|262167831|ref|ZP_06035532.1| hypothetical protein VIJ_001002 [Vibrio cholerae RC27]
gi|297579679|ref|ZP_06941606.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298500049|ref|ZP_07009855.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9657587|gb|AAF96108.1| hypothetical protein VC_A0195 [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549015|gb|EAX59052.1| hypothetical protein VC274080_A0221 [Vibrio cholerae 2740-80]
gi|121629952|gb|EAX62362.1| hypothetical protein VCV52_A0209 [Vibrio cholerae V52]
gi|124114872|gb|EAY33692.1| hypothetical protein A55_A0189 [Vibrio cholerae 1587]
gi|126512570|gb|EAZ75164.1| hypothetical protein A5C_A0240 [Vibrio cholerae NCTC 8457]
gi|126519285|gb|EAZ76508.1| hypothetical protein A5E_A0227 [Vibrio cholerae B33]
gi|146314384|gb|ABQ18924.1| hypothetical protein VC0395_1081 [Vibrio cholerae O395]
gi|227010961|gb|ACP07172.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227014820|gb|ACP11029.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229336338|gb|EEO01356.1| hypothetical protein VCA_000295 [Vibrio cholerae bv. albensis
VL426]
gi|229345341|gb|EEO10314.1| hypothetical protein VCC_001326 [Vibrio cholerae RC9]
gi|229348674|gb|EEO13632.1| hypothetical protein VCB_002346 [Vibrio cholerae TMA 21]
gi|229353008|gb|EEO17948.1| hypothetical protein VCE_001971 [Vibrio cholerae B33]
gi|229356990|gb|EEO21908.1| hypothetical protein VCF_001861 [Vibrio cholerae BX 330286]
gi|229371602|gb|ACQ62024.1| hypothetical protein VCD_000054 [Vibrio cholerae MJ-1236]
gi|254846312|gb|EET24726.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255735748|gb|EET91146.1| hypothetical protein VCH_002360 [Vibrio cholera CIRS 101]
gi|262023739|gb|EEY42439.1| hypothetical protein VIJ_001002 [Vibrio cholerae RC27]
gi|262028243|gb|EEY46901.1| hypothetical protein VIG_003349 [Vibrio cholerae INDRE 91/1]
gi|297535325|gb|EFH74159.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297542030|gb|EFH78081.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|327485416|gb|AEA79822.1| hypothetical protein VCLMA_B0177 [Vibrio cholerae LMA3894-4]
Length = 182
Score = 35.6 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 24/191 (12%), Positives = 60/191 (31%), Gaps = 35/191 (18%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA-------- 112
+ + L+ +R S + G+N Q F+ G++ +
Sbjct: 18 AYAGNSPYSFSLSTGFSRIDSPSSSDEAWVTQFGYNYQFSPFI-GLDLGYSGMIGNGAEM 76
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+K + F +G + +++ ++Y GG V + DN +
Sbjct: 77 LNTQKQKIDVKVEGFYFGAFFEQ---PINNLTILYARGGLSQFKVKERYELGAIGDNRQ- 132
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
F G + +G + ++ ++L+ Y +++ ++
Sbjct: 133 ----FSGTNPYIGIGTKVQSSIDKSLALTMELSYY-----------------PLEQDYSS 171
Query: 232 HIASLGINMHF 242
++G F
Sbjct: 172 LSFTVGGQYRF 182
>gi|284047583|ref|YP_003397922.1| hypothetical protein Acfer_0199 [Acidaminococcus fermentans DSM
20731]
gi|283951804|gb|ADB46607.1| hypothetical protein Acfer_0199 [Acidaminococcus fermentans DSM
20731]
Length = 202
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 11/110 (10%)
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF--DGHGSSVVLGIGLDYMVNY 195
Y + L YG GG+ + S A GR + +
Sbjct: 99 YQFNPYL-YGYGGYVRNRLKQHGYHDNNSGYQVGAMGRLPITDKTTGWA-----KFGTGN 152
Query: 196 DIS---LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+I+ L Y + + +V+ +++K + D H ++G++ F
Sbjct: 153 NITQYELGVGYAFTDNWEANVSYNDSKYKDFKGDIDAKTHEVNVGVSYKF 202
>gi|170721302|ref|YP_001748990.1| TonB-dependent siderophore receptor [Pseudomonas putida W619]
gi|169759305|gb|ACA72621.1| TonB-dependent siderophore receptor [Pseudomonas putida W619]
Length = 722
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 5/98 (5%)
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY----MVNYDISLSASYR 204
+ + ++D + + S V G+D + + + A Y
Sbjct: 530 ASVALFRIDQENRGVSQTDLAGCSDPTNCYVASGEVRSQGIDMELQGALTRNWQVGAGYT 589
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y H + +N + +R D H+ L F
Sbjct: 590 YARVHTLK-DAANPGNVNQRFDTDTPEHLFKLTTTYRF 626
>gi|56413343|ref|YP_150418.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362268|ref|YP_002141905.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56127600|gb|AAV77106.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197093745|emb|CAR59218.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 212
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S + Y G D+ + D +G+DY++N
Sbjct: 110 FGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKKTGLSDLSFKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D + AS Y+ + + V + S G F
Sbjct: 168 DWLIGASVWYMDIDTTANYKMGGVQQHDSVRLDPWVFMFSAG--YRF 212
>gi|307731206|ref|YP_003908430.1| OmpW family protein [Burkholderia sp. CCGE1003]
gi|307585741|gb|ADN59139.1| OmpW family protein [Burkholderia sp. CCGE1003]
Length = 241
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 30/106 (28%), Gaps = 8/106 (7%)
Query: 145 IYGMGGFGGAYVIDS--SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
Y G + D + E++ V G Y N S
Sbjct: 136 PYLGIGVSRIWFTDEKITNGTFEANVLHGPTSVTTDSSWEPVFNAGFSYSFNQHWFAGVS 195
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHI------ASLGINMHF 242
Y+P + N+ A++ V ++ + I + I F
Sbjct: 196 VSYLPLSTTAKLNTQARTPVGTLNVQSQTKIKLNPIVTYVNIGYRF 241
>gi|261392963|emb|CAX50548.1| outer-membrane associated protein NspA [Neisseria meningitidis
8013]
gi|325135744|gb|EGC58356.1| surface protein A [Neisseria meningitidis M0579]
Length = 174
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 12/72 (16%)
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
F + + + G+ Y V ++ L A YRY + +
Sbjct: 115 GGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNTVKN------------VR 162
Query: 231 AHIASLGINMHF 242
+ S+G+ + F
Sbjct: 163 SGELSVGVRVKF 174
>gi|110833304|ref|YP_692163.1| hypothetical protein ABO_0443 [Alcanivorax borkumensis SK2]
gi|110646415|emb|CAL15891.1| putative membrane protein [Alcanivorax borkumensis SK2]
Length = 183
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 47/158 (29%), Gaps = 10/158 (6%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
VG +I Y + ++L + I G+ + D+ +
Sbjct: 24 VGPYIGGNYSQIQYDN--EEYDTDTLKIDSATINAGYEFTD---FLALEARGGLGFDEDS 78
Query: 119 FYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ +K + + Y +GG+ S+ + + +
Sbjct: 79 QGIVDFDMDHLYGGYVKLSAPIGEKIRPYVIGGYTKVKGEVSANGTLAGVDYSYSDTETF 138
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVN 214
S G GLD+ + + + Y RY+ ++
Sbjct: 139 EDES---YGAGLDFNITDTVGANLEYMRYVDTDEEEIS 173
>gi|297185483|gb|ADI24121.1| outer membrane protein W [Aeromonas hydrophila]
Length = 203
Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 31/107 (28%), Gaps = 11/107 (10%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G ++ + + + + +GLD +N
Sbjct: 108 FGDANSKVRPYIGAGI-----NYTTFFDEQGRGALDGTDVSVDSSWGMAGQVGLDMAIND 162
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++AS I + + V ++ + G+ F
Sbjct: 163 RWFVNASAWIIDIDT------DVHTAVGTINTSIDPMAFMFGVGYRF 203
>gi|89073263|ref|ZP_01159793.1| Outer membrane protein [Photobacterium sp. SKA34]
gi|89050973|gb|EAR56437.1| Outer membrane protein [Photobacterium sp. SKA34]
Length = 203
Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 55/202 (27%), Gaps = 43/202 (21%)
Query: 56 GNYVGLHISRLYETHPLADTINRKT------YNSLLPNGLGIELGHNIQLEDFVFGINCH 109
G Y+G + + + T + + N + G+ Q V +
Sbjct: 30 GFYIGAGVGTTDFHYDKSLTSSVENNHEINYSNKADGESYKLIAGY--QFNRIV-SLEAQ 86
Query: 110 TT-AAKDDSTFYRLKEKYFIYG-----DVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLE 162
T T K + GY+ D+ L + + G G +
Sbjct: 87 YTKYGDVKETLEVEGHKLTSKAEHQSFSLAANLGYTFDNGLRPFALVGLGQISLK----- 141
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN--YDISLSASYRYIPHHIHSVNNSNAKS 220
F G + LG GL+Y + + + +Y + + + N
Sbjct: 142 ----------SPGFKDDGGLIRLGAGLEYQIKQVPGLGIRTAYEADFYTLEATNK----- 186
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D + LG F
Sbjct: 187 -----DYDMSVGSWYLGTTYQF 203
>gi|86146099|ref|ZP_01064425.1| long-chain fatty acid transport protein [Vibrio sp. MED222]
gi|85836046|gb|EAQ54178.1| long-chain fatty acid transport protein [Vibrio sp. MED222]
Length = 422
Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 23/95 (24%), Gaps = 8/95 (8%)
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G G F + L + + + IG Y +N +L Y Y
Sbjct: 287 GWGDFDQIEFRNLDLATSPVGGANGSYNKEYKWQDGWHYAIGGTYYLNDTWTLRTGYMY- 345
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ S + S G H
Sbjct: 346 -------DTSAQDELTSISVPDSDRQWFSAGFTYH 373
>gi|218458992|ref|ZP_03499083.1| putative outer membrane protein [Rhizobium etli Kim 5]
Length = 305
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 45/161 (27%), Gaps = 7/161 (4%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK 123
Y + + + PN +G+ G F + + +D +
Sbjct: 144 GTFYAGISVDELEDGFYKTGEEPNNVGVAFGVGGTAGAFSYQVTGGWDFDNEDGAVRAMG 203
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV-------IDSSLEKVESDNSKNAKGRF 176
G + L A YS Y + A V+ G
Sbjct: 204 TVEIGPGTLGLAAVYSSGPNSYYSAAEWAVAAEYAIKATDKLKITPGVQYYGDYYVSGDD 263
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
G + +G+ +DY + + AS +Y+ + S
Sbjct: 264 FSDGDAWKVGLTVDYQIVDNFYAKASVQYLDPEDADDSTSG 304
>gi|209550902|ref|YP_002282819.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209536658|gb|ACI56593.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 347
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 50/163 (30%), Gaps = 8/163 (4%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
Y + + + Y+ N +G+ +G + F + I ++ +
Sbjct: 179 AFYAGISVDELEDSPFYDGETANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGT 238
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE--------SDNSKNAKGRF 176
G + L Y+ + Y + A DN G F
Sbjct: 239 VAVGPGTLGLAVVYATNPNAYYNKAEWAIAAEYAIKATDKLKITPAVQYYDNYGVTAGEF 298
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ S+ G+ +DY + +++ S +Y+ + S
Sbjct: 299 NDDVSAWKAGVTIDYQIVDNLAAKVSVQYLDPDNAADVTSGYF 341
>gi|152984942|ref|YP_001346421.1| outer membrane protein OprG precursor [Pseudomonas aeruginosa PA7]
gi|150960100|gb|ABR82125.1| outer membrane protein OprG precursor [Pseudomonas aeruginosa PA7]
Length = 232
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 4/100 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
YG G D L ++ D + +G DYM+N + +
Sbjct: 135 PYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSW--GLAGELGFDYMLNEHALFNMAVW 192
Query: 205 YIPHHIHSVNNSNAKSDV--ERVDRKGNAHIASLGINMHF 242
Y+ + N + V +VD + + +G F
Sbjct: 193 YMDIDTKASINGPSALGVSKTKVDVDVDPWVYMIGFGYKF 232
>gi|157960285|ref|YP_001500319.1| OmpA domain-containing protein [Shewanella pealeana ATCC 700345]
gi|157845285|gb|ABV85784.1| OmpA domain protein transmembrane region-containing protein
[Shewanella pealeana ATCC 700345]
Length = 346
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 52/192 (27%), Gaps = 32/192 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC---HTTAA 113
Y+G + D + + + L QL + A
Sbjct: 27 WYIGA--GAGQSNYESVDAAS----HLGDGSDLAWNALVGYQLNKY-LAFEAGWQDLGAT 79
Query: 114 KDDSTFYRLKE--KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D + L K + G + G S + G G + + S
Sbjct: 80 DDTHMWGGLDGSQKIDVDGFTLGVVGTLPLSEKWFLTGEAGAYQYHLAHQMSADKYVSAM 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGN 230
++ G G+ Y + +++SA Y R+ + N +N +
Sbjct: 140 --------DTAPYFGAGVGYNITDSLAISAKYRRFAKIDETAWNTAN-----------MD 180
Query: 231 AHIASLGINMHF 242
A L + F
Sbjct: 181 AQTVGLQLTYRF 192
>gi|152969400|ref|YP_001334509.1| outer membrane protein X [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238893868|ref|YP_002918602.1| outer membrane protein X [Klebsiella pneumoniae NTUH-K2044]
gi|262041098|ref|ZP_06014316.1| outer membrane protein X [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330010085|ref|ZP_08306684.1| outer membrane protein X [Klebsiella sp. MS 92-3]
gi|1279830|gb|AAA97932.1| OmpK17 [Klebsiella pneumoniae]
gi|150954249|gb|ABR76279.1| outer membrane protein X [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238546184|dbj|BAH62535.1| outer membrane protein X [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259041548|gb|EEW42601.1| outer membrane protein X [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534636|gb|EGF61210.1| outer membrane protein X [Klebsiella sp. MS 92-3]
Length = 170
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 41/139 (29%), Gaps = 11/139 (7%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
T + + G L + + ++ G+ T + D+
Sbjct: 22 AFAATSTVTGGYAQSDMQGKANKAGGFNLKYRYEQDNNPLGVIGSFTYTEKDNNSNGTYN 81
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K YG A D IYG+ G G +++ + D
Sbjct: 82 KGQYYGITAGPAYRLNDWASIYGVVGVGYGKFQNNNYPH-----------KSDMSDYGFS 130
Query: 185 LGIGLDYMVNYDISLSASY 203
G GL + +++L SY
Sbjct: 131 YGAGLQFNPIENVALDFSY 149
>gi|294788473|ref|ZP_06753716.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
gi|294483904|gb|EFG31588.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
Length = 189
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 44/167 (26%), Gaps = 25/167 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD-- 115
YV + + D + ++G +QL D+ G +
Sbjct: 33 YVFGTVGTAQDGLKTLDGNFNSRDERVAG-----QIGFGLQLNDY-MGGEIYYQGGDKFE 86
Query: 116 --DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + G G S + ++ G S +
Sbjct: 87 YKGKNGNMERVRVNGVGT-RATIGTSTQNRGRVFAKLGVVAVDHETSGGIDSNARPQ--- 142
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
G+G Y +N + ++ + Y ++ SV+ A
Sbjct: 143 ----------FTAGVGASYNINNNFAVRSDYDHVFKRNTSVDRKGAD 179
>gi|163800641|ref|ZP_02194542.1| long-chain fatty acid transport protein [Vibrio sp. AND4]
gi|159176084|gb|EDP60878.1| long-chain fatty acid transport protein [Vibrio sp. AND4]
Length = 417
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y GG + + D G+ Y + +++L A + +
Sbjct: 320 YSFGGTYTLNSEWTLRAGIAYDEQAGKATLSIPDSDRFWYSAGVTYAMKENLTLDAGFAF 379
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S +NA + D +G A+I+++ +N F
Sbjct: 380 VKSKSGSFTETNAGNRDITFDSEGTAYISAVQMNYTF 416
>gi|89887400|gb|ABD78346.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia cameroni]
Length = 201
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 17/174 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ Y+ L P+ + +++D + + + I + +
Sbjct: 36 DNSDYSPLKPSFIAGGGAFGYKMDDIRVDVEGVYSYLNKNDVTDAEFTPDTIADSLTAIS 95
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 96 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 147
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
G+ Y V ++ L A RY + + + S + D + A G+ +
Sbjct: 148 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFN 201
>gi|15599262|ref|NP_252756.1| Outer membrane protein OprG precursor [Pseudomonas aeruginosa PAO1]
gi|116052103|ref|YP_789053.1| outer membrane protein OprG precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218889653|ref|YP_002438517.1| Outer membrane protein OprG precursor [Pseudomonas aeruginosa
LESB58]
gi|254236955|ref|ZP_04930278.1| Outer membrane protein OprG precursor [Pseudomonas aeruginosa
C3719]
gi|254242748|ref|ZP_04936070.1| Outer membrane protein OprG precursor [Pseudomonas aeruginosa 2192]
gi|296387377|ref|ZP_06876876.1| outer membrane protein W [Pseudomonas aeruginosa PAb1]
gi|313109507|ref|ZP_07795462.1| outer membrane protein OprG precursor [Pseudomonas aeruginosa
39016]
gi|9950264|gb|AAG07454.1|AE004822_14 Outer membrane protein OprG precursor [Pseudomonas aeruginosa PAO1]
gi|115587324|gb|ABJ13339.1| outer membrane protein OprG precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126168886|gb|EAZ54397.1| Outer membrane protein OprG precursor [Pseudomonas aeruginosa
C3719]
gi|126196126|gb|EAZ60189.1| Outer membrane protein OprG precursor [Pseudomonas aeruginosa 2192]
gi|218769876|emb|CAW25637.1| Outer membrane protein OprG precursor [Pseudomonas aeruginosa
LESB58]
gi|310881964|gb|EFQ40558.1| outer membrane protein OprG precursor [Pseudomonas aeruginosa
39016]
Length = 232
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 4/100 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
YG G D L ++ D + +G DYM+N + +
Sbjct: 135 PYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSW--GLAGELGFDYMLNEHALFNMAVW 192
Query: 205 YIPHHIHSVNNSNAKSDV--ERVDRKGNAHIASLGINMHF 242
Y+ + N + V +VD + + +G F
Sbjct: 193 YMDIDTKASINGPSALGVNKTKVDVDVDPWVYMIGFGYKF 232
>gi|160883686|ref|ZP_02064689.1| hypothetical protein BACOVA_01658 [Bacteroides ovatus ATCC 8483]
gi|156110771|gb|EDO12516.1| hypothetical protein BACOVA_01658 [Bacteroides ovatus ATCC 8483]
Length = 346
Score = 35.6 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 55/191 (28%), Gaps = 24/191 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + LY + + + + NG G+ + + +V G
Sbjct: 66 FYVGATLG-LYSVNYDRTSEYNEDFTDKDGNG---HGGYTLGNDFWVDGSGVDF------ 115
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+L + + G +V + + + AY+ E++
Sbjct: 116 ----KLGFILRPFESSSFRIGAAVHTPTFFSLKERNTAYLRFDLSEELNDITRPYDARGN 171
Query: 177 DGHG-------SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D G + + Y + ++L Y Y + + + + D K
Sbjct: 172 DTEGEYEYKLVTPWKFNASMGYTIGSSVALGVEYEYSDRTKAKMKDPDGYELGQTEDIKA 231
Query: 230 ---NAHIASLG 237
H +G
Sbjct: 232 MMKPVHTLRVG 242
>gi|77360562|ref|YP_340137.1| TonB-dependent receptor protein [Pseudoalteromonas haloplanktis
TAC125]
gi|76875473|emb|CAI86694.1| putative TonB-dependent receptor protein with OmpA-like
transmembrane domain [Pseudoalteromonas haloplanktis
TAC125]
Length = 189
Score = 35.6 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 27/97 (27%), Gaps = 8/97 (8%)
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
D + + + GY + +Y GG+ + V S
Sbjct: 76 LELAYQNFDEVSDVDSKAEIDGVSLAARLGYPITESFSVYAKGGWLEWDAEYTQDLPVGS 135
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
++ G G G++Y + ++ Y
Sbjct: 136 VSASTDGGDA-------FYGAGIEYALTTNVQFRLEY 165
>gi|156975393|ref|YP_001446300.1| hypothetical protein VIBHAR_03124 [Vibrio harveyi ATCC BAA-1116]
gi|156526987|gb|ABU72073.1| hypothetical protein VIBHAR_03124 [Vibrio harveyi ATCC BAA-1116]
Length = 420
Score = 35.6 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 25/96 (26%), Gaps = 8/96 (8%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y + G + ++ + + IG Y +N D +L A Y Y
Sbjct: 279 YSIQYIGWGAFDQIEFKNLKDSLLVGSYNKDYQWQDGWHYSIGGTYYLNNDWTLRAGYMY 338
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ S + S G H
Sbjct: 339 --------DTSAQDQVTSISVPDSDRQWLSAGFTYH 366
>gi|146310959|ref|YP_001176033.1| outer membrane protein X [Enterobacter sp. 638]
gi|145317835|gb|ABP59982.1| virulence-related outer membrane protein [Enterobacter sp. 638]
Length = 172
Score = 35.6 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 40/136 (29%), Gaps = 8/136 (5%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
T + + ++ G L + + ++ G+ T + D K
Sbjct: 24 ATSTVTGGYAQSDMQGVVNKANGFNLKYRYEQDNNPLGVIGSFTYTEKDRFEDGAYNKAQ 83
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
YG A D IYG+ G G + E + G
Sbjct: 84 YYGVTAGPAFRLNDWASIYGVVGVGYGKFQQTENESLNR--------SASTSDYGFSYGA 135
Query: 188 GLDYMVNYDISLSASY 203
G+ + +++L SY
Sbjct: 136 GMQFNPIENVALDFSY 151
>gi|157164523|ref|YP_001467011.1| putative outer membrane protein [Campylobacter concisus 13826]
gi|112800041|gb|EAT97385.1| putative outer membrane protein [Campylobacter concisus 13826]
Length = 199
Score = 35.6 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 49/144 (34%), Gaps = 16/144 (11%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL----EDFVFGINCHTTAAK 114
VG+ + ++ A + N K+ GLGI+ G++ + +++ +
Sbjct: 26 VGVEGDYSFNSNLTAKSDNGKSKAKKAQPGLGIKAGYDFDVARVYGAYIYDFQAKKSLGD 85
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+D T + FI G + K++ D G
Sbjct: 86 EDGTVVKWNTHKFIVGA----------DYTPSVAKDLKLILGGYTGFSKLKLDVFDTHDG 135
Query: 175 RFDGHGSSVVLGI--GLDYMVNYD 196
G+ + +LG G +Y +N +
Sbjct: 136 SEKGNATGWILGARVGAEYSINEN 159
>gi|115350374|ref|YP_772213.1| OmpW family protein [Burkholderia ambifaria AMMD]
gi|172059393|ref|YP_001807045.1| OmpW family protein [Burkholderia ambifaria MC40-6]
gi|115280362|gb|ABI85879.1| OmpW family protein [Burkholderia ambifaria AMMD]
gi|171991910|gb|ACB62829.1| OmpW family protein [Burkholderia ambifaria MC40-6]
Length = 243
Score = 35.6 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 52/190 (27%), Gaps = 15/190 (7%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTFYRL 122
P+ +I + LG+ G+ + + V GI T F L
Sbjct: 54 GGTPINQSIPNTGAGINDADTLGLAAGYFVTDHISTELVMGIPPKFDITGKGRFENFGVL 113
Query: 123 KEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGRFDG 178
Y ++L+ + + Y G + + E+
Sbjct: 114 GRAYQWSPALLLRYHFNDANAKFRPYLGVGATYVWFTGAKITNSSFENGVLGGPTSATTS 173
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS------NAKSDVERVDRKGNAH 232
+ + VL G Y S YIP + + + ++ + N
Sbjct: 174 NQWAPVLNAGFTYNFTKHWFGGLSISYIPVSVTATFTTARRTPVGTLTETSKAKISLNPI 233
Query: 233 IASLGINMHF 242
+ L + F
Sbjct: 234 VTYLNVGYRF 243
>gi|262382900|ref|ZP_06076037.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262295778|gb|EEY83709.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 167
Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 8/144 (5%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
I + + N LG++ +N+ + + KD +T +
Sbjct: 15 IGVFAQKGDFSLLGNFGYQTDFKRVMLGVQGRYNLT-DHVRLAPDLMFFFPKDKTTGLDV 73
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
D+ S D L +Y + GF V+ + +
Sbjct: 74 DVNAHYVFDL------SEDHLSLYPLAGF-NLQNNFQGKRTVKGEEGEVTLDSHSSTNFG 126
Query: 183 VVLGIGLDYMVNYDISLSASYRYI 206
+G GL Y +N L+ Y+Y+
Sbjct: 127 FNVGGGLTYNLNLRNFLNVEYKYV 150
>gi|152978512|ref|YP_001344141.1| porin opacity type [Actinobacillus succinogenes 130Z]
gi|150840235|gb|ABR74206.1| porin opacity type [Actinobacillus succinogenes 130Z]
Length = 202
Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 21/201 (10%), Positives = 47/201 (23%), Gaps = 36/201 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YV + D + K + +G ++ D+ F + T
Sbjct: 23 WYVEGNAGYSRLKTSGGDGYDLKDNSFSPSLAIG------YKVNDWRFAL--DYTYYGKA 74
Query: 117 STFYRLKEKYF----------IYGDVVLKAGYSVDSLL-IYGMGGFGGAYVI----DSSL 161
Y + + ++V+S L Y ++ +
Sbjct: 75 DENYGWQYYQEHEVGNEEMKAYGFGLSAYYDFNVNSSLKPYVGARLSVNHIKSELDYTLY 134
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ +G+ Y L+ + Y +
Sbjct: 135 SDNTGKVVRRGSYSDSETKFGYGAVVGVSYNFAPQWDLNVAAEYNRLGKEN--------- 185
Query: 222 VERVDRKGNAHIASLGINMHF 242
K + + A +G+ F
Sbjct: 186 ----GVKFDQYGAKVGVRYSF 202
>gi|332279553|ref|ZP_08391966.1| LOW QUALITY PROTEIN: outer membrane protein W [Shigella sp. D9]
gi|332101905|gb|EGJ05251.1| LOW QUALITY PROTEIN: outer membrane protein W [Shigella sp. D9]
Length = 226
Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 124 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 181
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 182 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 226
>gi|218513640|ref|ZP_03510480.1| porin outer membrane protein [Rhizobium etli 8C-3]
Length = 183
Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 48/163 (29%), Gaps = 8/163 (4%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
Y + + + YN N +G+ +G + F + I ++ +
Sbjct: 15 AFYAGISVDELEDSPFYNGETANNVGVAIGLGGKAGAFSYQITAGYDTDNEEGAVRAMGT 74
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE--------SDNSKNAKGRF 176
G + L Y+ + Y + A +N G F
Sbjct: 75 VAVGPGTLGLAVVYASNPNAYYNKAEWAIAAEYAIKATDKLKITPAVQYYNNYGVTAGEF 134
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + G+ +DY + ++S S +Y+ S
Sbjct: 135 NDDVDAWKAGVTIDYQIVDNLSAKVSVQYLDPDNAEDVTSGYF 177
>gi|117618280|ref|YP_855820.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559687|gb|ABK36635.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 351
Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 49/180 (27%), Gaps = 25/180 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + + D + S L + G+N G + D
Sbjct: 27 WYAG--VGGGWAIAH--DLGDFGKDASKDATALSLFGGYNFTEN---LGAELGYLSTGDW 79
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
V+ + D ++ GG +V +
Sbjct: 80 DVQGNDFSSQGATLSVIGRLPLG-DIFSVFAEGGGYVYHVKSINGG-------------- 124
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ + + G+GL ++ + + A YRY+ + N K + A+L
Sbjct: 125 -DNNLAPLAGLGLTAKLHDWVDIQARYRYM--VRVGDDPDNDKVGSGTQRWVSDISTATL 181
>gi|104782847|ref|YP_609345.1| exoprotein with autotransporter [Pseudomonas entomophila L48]
gi|95111834|emb|CAK16558.1| putative exoprotein with autotransporter precursor [Pseudomonas
entomophila L48]
Length = 875
Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 26/207 (12%), Positives = 54/207 (26%), Gaps = 28/207 (13%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN----IQLEDFVFGINCHTTAAKDD 116
L + Y + + + + G+ + +G N +
Sbjct: 649 LTLGVAYSFIDTDVNGRSGSKTDVEGHAFTLYGGYELGNYFVDGNLTYGFNDNEGKRDIA 708
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
T + G + L AGY+ + + A ++ + S A
Sbjct: 709 GTRAKSDYDSKQLG-LNLVAGYTWQVSSQWLVEPRLAARYNRVDIDGYKEKGSSAALKIE 767
Query: 177 DGHGSSVVLGIGLDYMVNYDISLS-ASYR-----YIPHHIHSVNNSNA------------ 218
D ++ LG G+ +Y + + Y V N++
Sbjct: 768 DQRYEAIELGAGVRLAGSYALGAGTLEPQFKLMTYHDFAADKVQNTSTFLVGGTPFVTNG 827
Query: 219 -----KSDVERVDRKGNAHIASLGINM 240
S V ++G+N
Sbjct: 828 ASTARNSYEAGVGADYKLGAVTVGLNY 854
>gi|332715960|ref|YP_004443426.1| outer membrane protein [Agrobacterium sp. H13-3]
gi|325062645|gb|ADY66335.1| outer membrane protein [Agrobacterium sp. H13-3]
Length = 232
Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 60/259 (23%), Gaps = 47/259 (18%)
Query: 2 NFNGYGALFFVVFLSIVV---PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNY 58
N AL V +S+ +++A DL P A+ + G
Sbjct: 3 NRKKKTALLASVTVSVAAMLMSANAMAADLATPAPA---PTAEEAIAAASPWMLRVRGLG 59
Query: 59 V------------GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
V G +S P D T N LG
Sbjct: 60 VITHDSGSVDGVPGAGLSYSDTVIPELDISYFFTPNIAAELILG---------------- 103
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY---SVDSLLIYGMGGFGGAYVIDSSLEK 163
+ L Y + Y G + + S +
Sbjct: 104 -TTYAKINGEGVLAGTPVGKTWLLPPTLTLQYHFTDFGAFKPYIGAGVNYSMFYNQSEKP 162
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
S+ + + +G DYM++ ++ + I
Sbjct: 163 GFSNLDV-------KNKFGAAVQVGFDYMLDEHWGVNFDVKKIFLKTDWTAELGGAPISG 215
Query: 224 RVDRKGNAHIASLGINMHF 242
+ K + + GI F
Sbjct: 216 --EAKLDPWLIGAGITYRF 232
>gi|5825526|gb|AAD53279.1|AF175676_1 surface protein A [Neisseria meningitidis]
gi|325197884|gb|ADY93340.1| surface protein A [Neisseria meningitidis G2136]
Length = 174
Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
F + + + G+ Y V ++ L A YRY +
Sbjct: 115 GGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNT 157
>gi|168230171|ref|ZP_02655229.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194468526|ref|ZP_03074510.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|204927572|ref|ZP_03218773.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|194454890|gb|EDX43729.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|204322914|gb|EDZ08110.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205335471|gb|EDZ22235.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 212
Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKNAGLSDLSFKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D + AS Y+ + + V + S G F
Sbjct: 168 DWLIGASVWYMDIDTTANYKMGGVQQHDSVRLDPWVFMFSAG--YRF 212
>gi|89887436|gb|ABD78364.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia cameroni]
Length = 200
Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 17/174 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
++ Y+ L P+ + +++D + + + + I + +
Sbjct: 35 DKSDYSPLKPSFIAGGGAFGYKMDDIRVDVEGVYSYLNKNDVTDAEFKPDTIADSLTAIS 94
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 95 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 146
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
G+ Y V ++ L A RY + + + S + D + A G+ +
Sbjct: 147 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFN 200
>gi|121634460|ref|YP_974705.1| outer membrane protein [Neisseria meningitidis FAM18]
gi|218767785|ref|YP_002342297.1| outer membrane protein [Neisseria meningitidis Z2491]
gi|1808967|gb|AAB41580.1| outer membrane protein [Neisseria meningitidis]
gi|120866166|emb|CAM09906.1| outer membrane protein [Neisseria meningitidis FAM18]
gi|121051793|emb|CAM08099.1| outer membrane protein [Neisseria meningitidis Z2491]
gi|319410036|emb|CBY90370.1| outer-membrane associated protein NspA [Neisseria meningitidis WUE
2594]
Length = 174
Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
F + + + G+ Y V ++ L A YRY +
Sbjct: 115 GGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNT 157
>gi|322436344|ref|YP_004218556.1| hypothetical protein AciX9_2752 [Acidobacterium sp. MP5ACTX9]
gi|321164071|gb|ADW69776.1| hypothetical protein AciX9_2752 [Acidobacterium sp. MP5ACTX9]
Length = 198
Score = 35.6 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 12/107 (11%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + + G G DN + G + G GL Y ++
Sbjct: 104 FGLNFKNFNPFVEAGPGVM------FFSPIRDNGTDRLDAKRATGVGGLFGAGLAYEISP 157
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ A YR S + E + ++G+ HF
Sbjct: 158 SFDIRAEYRGFFVKAPSFIDDFKTGRYEVLSMP------TIGVAFHF 198
>gi|255690358|ref|ZP_05414033.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565]
gi|260624163|gb|EEX47034.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565]
Length = 175
Score = 35.6 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 22/182 (12%), Positives = 54/182 (29%), Gaps = 23/182 (12%)
Query: 63 ISRLYE-THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR 121
+ Y A + GLG++ +NI + + D+ +
Sbjct: 15 VGNTYAQKGKQAIGFGLSYGTEIESVGLGLKYQYNIT-NPIRLEPSLNYFFENDNVSMLD 73
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH-G 180
+ + V K + LL + + D ++ + + D
Sbjct: 74 VNLNFHYLFPVASKV--KLYPLLGLTFSNWMFDWDNDLDVDIDGNHVHIDGDDDSDNECR 131
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ +G G+D+ + + ++ +RY ++ + + +LG
Sbjct: 132 FGMNIGGGVDFAIARNWMMNFEFRY------------------QLVSDFDQAVFNLGFAY 173
Query: 241 HF 242
F
Sbjct: 174 RF 175
>gi|254511229|ref|ZP_05123296.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221534940|gb|EEE37928.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 312
Score = 35.6 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 24/77 (31%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
S G F + + + DY +N + YRYI D++
Sbjct: 246 SGTGLVDYGGFRSGSETWQVLLTADYAINERWLIRGGYRYISFDH----------DIDGN 295
Query: 226 DRKGNAHIASLGINMHF 242
D K + LG F
Sbjct: 296 DFKFDQSGPLLGATYRF 312
>gi|84393743|ref|ZP_00992491.1| hypothetical outer membrane protein [Vibrio splendidus 12B01]
gi|84375605|gb|EAP92504.1| hypothetical outer membrane protein [Vibrio splendidus 12B01]
Length = 229
Score = 35.6 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 47/151 (31%), Gaps = 14/151 (9%)
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G + Q+ V T + + + + + G+++ + Y +
Sbjct: 92 GGISYQVITLVGMFEA-TAGSDLGFRHNGIYAEAAWRLPIR-RNGWAITPSIGYA---YN 146
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFD-GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + ++ S+ FD +G+G V +I ++ RY
Sbjct: 147 SERLNNHLYGVSSAEASRTNLNEFDADWDGQYFIGLGGYLHVTPNIRVTGGVRYTNLEG- 205
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N+ ++ N +G+ F
Sbjct: 206 --DIENSPILESGINMAAN-----VGVAYVF 229
>gi|229588666|ref|YP_002870785.1| hypothetical protein PFLU1126 [Pseudomonas fluorescens SBW25]
gi|229360532|emb|CAY47389.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 270
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 25/224 (11%)
Query: 29 YLPRKIDLFNEADNNVEYQDDEYGIWS-----GNYVGLHISRLYETHPLADTINRKTYNS 83
Y R + F+ +V D+ WS G G +I+ L ++ + N
Sbjct: 61 YETRPVPYFDLDWGSVSLSTDDGLTWSALDTHGFTAGPYINYL--QGRTSNGSLQGLRNV 118
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSL 143
+G + + + + A+ +++ + G V + GY +
Sbjct: 119 SDMAEVGGFIQY-APADFWRV-------YAQMGQAVGGGRDQSGVLGKVGGELGYPLGGG 170
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR-----FDGHGSSVVLGIGLDYMVNYDIS 198
+I G + D +++A G ++ L ++ + + S
Sbjct: 171 IIGSTGLLAHFADARQTQTFFGVDANESADSGIRPYNASGGFQNMTLTQSFEFPLAANWS 230
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L S ++ + S A S + + N I+ F
Sbjct: 231 LLTSASWV-----HLVGSAANSSIVKETGDVNQGQVQTAISYKF 269
>gi|213961660|ref|ZP_03389926.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
gi|213955449|gb|EEB66765.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
Length = 232
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 33/105 (31%), Gaps = 4/105 (3%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+ Y GG G + D + + +V + G+ + + L+
Sbjct: 119 PITPYIFGGITGFWHDDLYFDPAYPKPTDAIDTSRRDFDFAVPVAFGVKAKITNRLVLAG 178
Query: 202 SYRYIPHHIHSVNNS---NAKSDVERVDRKGNAHIAS-LGINMHF 242
+ ++++ + N + R + + S L + F
Sbjct: 179 EVMFHFTFTNNLDGTAPKNRPFIFGNIGRSYDWYTLSGLTLTYTF 223
>gi|146311929|ref|YP_001177003.1| outer membrane protein W [Enterobacter sp. 638]
gi|145318805|gb|ABP60952.1| OmpW family protein [Enterobacter sp. 638]
Length = 211
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 29/107 (27%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D +N + D +GLDY+VN
Sbjct: 109 FGDASSKARPYIGAGVNYTTFFDEKFNDNGKENGLSDLSLKDSW--GAAGQVGLDYLVNR 166
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D L+ S Y+ + + + S G F
Sbjct: 167 DWLLNMSVWYMDIDTDVRFKAGGEQQSVHTRLDPWVFMFSAG--YRF 211
>gi|116750655|ref|YP_847342.1| aromatic hydrocarbon degradation membrane protein [Syntrophobacter
fumaroxidans MPOB]
gi|116699719|gb|ABK18907.1| membrane protein involved in aromatic hydrocarbon degradation
[Syntrophobacter fumaroxidans MPOB]
Length = 420
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 4/95 (4%)
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY----IP 207
G + + + IG Y +N +L A Y Y +P
Sbjct: 280 GWSSFEQLIIRLDKPVAGSMVSVNNRNWHDVWTGSIGAKYQLNDRFALVAGYLYQGNPVP 339
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +A + + + G++ F
Sbjct: 340 DSTFDPSIPDADAHLITIGTDFRYGALRAGLSYGF 374
>gi|332534599|ref|ZP_08410432.1| putative TonB-dependent receptor protein with OmpA-like
transmembrane domain [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035949|gb|EGI72429.1| putative TonB-dependent receptor protein with OmpA-like
transmembrane domain [Pseudoalteromonas haloplanktis
ANT/505]
Length = 189
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 23/74 (31%), Gaps = 8/74 (10%)
Query: 131 DVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ + GY + +Y GG+ + V + G G G+
Sbjct: 99 SLAARLGYPITESFSVYAKGGWLEWDADYTQDLPVGGVTASTDGGDA-------FYGAGI 151
Query: 190 DYMVNYDISLSASY 203
+Y + ++ Y
Sbjct: 152 EYALTTNVQFRLEY 165
>gi|45272202|gb|AAS57564.1| outer surface protein [Wolbachia endosymbiont of Diaea circumlita]
Length = 205
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 21/182 (11%)
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG 130
ADT + + G G+ +++D + + D+
Sbjct: 35 KTADTADTIDLYNASFIAGGGAFGY--KMDDIRVDVEGIYSWLNKDTDVTGASVPAGGVA 92
Query: 131 D-VVLKAG-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ + +G Y V + Y G G AY+ + + KV D + G G
Sbjct: 93 NNLTAISGLVNVYYDVAIEDMPITPYIGVGVGAAYINNPLVTKVTGD-------KDSGFG 145
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ G+ Y V +I L A RY + N D + + A G+
Sbjct: 146 VAYQAKAGVSYDVTPEIKLYAGARY--FGSYGANFGKTTKDGAGIKVLYSTVGAEAGVAF 203
Query: 241 HF 242
+F
Sbjct: 204 NF 205
>gi|16760149|ref|NP_455766.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142080|ref|NP_805422.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|168260046|ref|ZP_02682019.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168819555|ref|ZP_02831555.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|197247996|ref|YP_002146295.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|213025580|ref|ZP_03340027.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213163091|ref|ZP_03348801.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213424446|ref|ZP_03357259.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213622649|ref|ZP_03375432.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213650431|ref|ZP_03380484.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213855214|ref|ZP_03383454.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|238911877|ref|ZP_04655714.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289829078|ref|ZP_06546758.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|25090846|sp|Q8Z7E2|OMPW_SALTI RecName: Full=Outer membrane protein W; Flags: Precursor
gi|25355359|pir||AE0652 probable outer membrane protein STY1319 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502443|emb|CAD08400.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29137709|gb|AAO69271.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|197211699|gb|ACH49096.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205343891|gb|EDZ30655.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205351250|gb|EDZ37881.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|320085770|emb|CBY95546.1| Outer membrane protein W Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 212
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S + Y G D+ + D G++ + G+DY++N
Sbjct: 110 FGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKKTGLSDLSFKDSWGAAGQV--GVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D + AS Y+ + + V + S G F
Sbjct: 168 DWLIGASVWYMDIDTTANYKMGGVQQHDSVRLDPWVFMFSAG--YRF 212
>gi|332098222|gb|EGJ03195.1| outer membrane protein W [Shigella dysenteriae 155-74]
gi|332760351|gb|EGJ90641.1| outer membrane protein W [Shigella flexneri K-671]
gi|332767490|gb|EGJ97684.1| ompW, outer membrane protein [Shigella flexneri 2930-71]
Length = 207
Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 105 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 162
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 163 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 207
>gi|269121316|ref|YP_003309493.1| outer membrane autotransporter barrel domain protein [Sebaldella
termitidis ATCC 33386]
gi|268615194|gb|ACZ09562.1| outer membrane autotransporter barrel domain protein [Sebaldella
termitidis ATCC 33386]
Length = 877
Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 13/157 (8%)
Query: 61 LHISRLYETHPL-----ADTINRKTYNSLLPNGLGIELGHNIQLEDFV-----FGINCHT 110
H+ Y H L +YNS + G G+ G+N ++ V G++
Sbjct: 700 AHLQYGYNEHELNADWLGTGTKESSYNSHVIKG-GLSAGYNQKITSSVKIRPNIGVDYVY 758
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS--LLIYGMGGFGGAYVIDSSLEKVESDN 168
+T V KAG + + + G G + + + +
Sbjct: 759 VKEGVITTDGMDNIDSTDGKGFVGKAGVDIGNDEGKLRWNAGVGYKQNFTDTFHETRNMS 818
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ + D + +DY + S+ A Y Y
Sbjct: 819 NDYKMEKLDYSKGIMTASADIDYKITEKFSVKAGYEY 855
>gi|218674538|ref|ZP_03524207.1| porin [Rhizobium etli GR56]
Length = 254
Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
Y + + + YN N +G+ +G + F + I ++ +
Sbjct: 86 AFYAGISVDELEDSPFYNGETANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGT 145
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE--------SDNSKNAKGRF 176
G + L Y+ + Y + A DN G F
Sbjct: 146 VAVGPGTLGLAVVYASNPNAYYNKAEWAIAAEYAIKATDKLKITPAVQYYDNYGVTAGEF 205
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ S+ G+ +DY + ++S S +Y+
Sbjct: 206 NDDVSAWKAGVTIDYQIVDNLSTKISVQYLDPDNAD 241
>gi|89887418|gb|ABD78355.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia nigra]
Length = 201
Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 17/174 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
++ Y+ L P+ + +++D + + + + I + +
Sbjct: 36 DKSDYSPLKPSFIAGGGAFGYKMDDIRVDVEGVYSYLNKNDVTDAEFKPDTIADSLTAIS 95
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 96 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 147
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
G+ Y V ++ L A RY + + + S + D + A G+ +
Sbjct: 148 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGVAFN 201
>gi|34101139|gb|AAQ57514.1| outer surface protein percursor [Wolbachia endosymbiont of
Pediculus humanus capitis]
Length = 196
Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 14/176 (7%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG- 130
+ + ++ + L + + +++D + + D+ +
Sbjct: 30 ITNATGKEKDSPLKASFIAGGGAFGYKMDDIRVDVEGLYSWLNKDADVVGGTVADNLTAI 89
Query: 131 DVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
++ Y + + Y G G AYV + +KV D + G G +
Sbjct: 90 SGLVNVYYDIAIEDMPITPYVGVGVGAAYVSNPLAKKVTDD-------KASGFGVAYQAK 142
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V ++ L A RY + N + + + A G+ +F
Sbjct: 143 AGVSYDVTPEVKLYAGARY--FGSYGANFGKVTKEAAVIKVLYSTVGAEAGVAFNF 196
>gi|300716014|ref|YP_003740817.1| Virulence-related outer membrane protein X [Erwinia billingiae
Eb661]
gi|299061850|emb|CAX58966.1| Virulence-related outer membrane protein X [Erwinia billingiae
Eb661]
Length = 171
Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 36/130 (27%), Gaps = 9/130 (6%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
++ + Y + G L + + G T + D+T +
Sbjct: 18 AGSAMAQSTVSGGYAQSDYQGVANKANGFNLKYRYENGSDPLGWIGSFTYTEKDNTDAGI 77
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
K YG A D IYG+ G G +S + + D
Sbjct: 78 YNKGQYYGITGGPAYRLNDWASIYGVVGIGYGKFQQNSTTSRD---------KSDSSDVG 128
Query: 183 VVLGIGLDYM 192
G G+ +
Sbjct: 129 FSYGAGMQFN 138
>gi|282901881|ref|ZP_06309784.1| hypothetical protein CRC_03322 [Cylindrospermopsis raciborskii
CS-505]
gi|281193219|gb|EFA68213.1| hypothetical protein CRC_03322 [Cylindrospermopsis raciborskii
CS-505]
Length = 260
Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 61/192 (31%), Gaps = 22/192 (11%)
Query: 42 NNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
NN+ W G+ +I ++ T RK N NG + Q E+
Sbjct: 72 NNINPDLPARNYWYGS---GNIGFSSQSDVGVSTGGRKQGNQSFSNGFSLNGAVGYQFEE 128
Query: 102 FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA----GY----SVDSLLIYGMGGFGG 153
+ T +S K G++ + GY + L Y G G
Sbjct: 129 VRTELEIGTRFFSGNSFSDPNGRKVSSTGNITATSVLINGYYDIPTSSKLRPYIGAGLGL 188
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
A+ + G+ + L G+ Y VNY ++ A +Y + +
Sbjct: 189 AFT-----------SGDIDIIDIGGNSFAYNLKGGIQYEVNYKGNIFAELKYASIGGYKL 237
Query: 214 NNSNAKSDVERV 225
N+NA D
Sbjct: 238 KNTNADIDSVNS 249
>gi|161503154|ref|YP_001570266.1| outer membrane protein W [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160864501|gb|ABX21124.1| hypothetical protein SARI_01222 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 212
Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S + Y G D+ + D +G+DY++N
Sbjct: 110 FGDSSSKVRPYVGIGVNYTTFFDNDFNDNGKKTGLSDLSFKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D + AS Y+ + + V + S G F
Sbjct: 168 DWLIGASVWYMDIDTTANYKMGGVQQHDSVRLDPWVFMFSAG--YRF 212
>gi|328468859|gb|EGF39819.1| hypothetical protein VP10329_14575 [Vibrio parahaemolyticus 10329]
Length = 362
Score = 35.2 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 58/192 (30%), Gaps = 23/192 (11%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIEL-GHNIQLEDFVFGINCHTTAAKDDSTFYR 121
+ Y + + ++ GL + L G N + T +
Sbjct: 172 VGYGYSSDVTISEDTDISIDTNYSAGLNLTLSGDNYRWNFAYLNAEYDQT-TVLSNAMQP 230
Query: 122 LKEKYFIYGDVVLK------------AGYSVDSLLIYGMG-----GFGGAYVIDSSLEKV 164
+ + G + LK A Y D + + G +L K
Sbjct: 231 IPGQGSAAGTIRLKDEDQHIQLFSLGAKYEFDRITVTAEGQTSDISTSWYAAASYNLNKF 290
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + + + GL + V+Y++S++A +++ + NN + +
Sbjct: 291 TPYVVYGQQFDDNEKKTGDSVLTGLRFDVDYNVSVNAEWQHFN----AFNNDSGAFSLPP 346
Query: 225 VDRKGNAHIASL 236
D N + L
Sbjct: 347 ADTNANLYTVML 358
>gi|262368921|ref|ZP_06062250.1| long-chain fatty acid transporter [Acinetobacter johnsonii SH046]
gi|262316599|gb|EEY97637.1| long-chain fatty acid transporter [Acinetobacter johnsonii SH046]
Length = 429
Score = 35.2 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 14/109 (12%), Positives = 28/109 (25%), Gaps = 2/109 (1%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY+ D G + ++ + N +G+GL Y
Sbjct: 321 VGYTDDQWSANVGVGRKFNDLWAGNVSVGWDSGAGNPISTLGPTEGYWNVGLGLQYSPTP 380
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG--INMHF 242
++ +Y ++ V + + G I F
Sbjct: 381 ATFIAGGVKYFWLGDAKAQVASNFGSDTYVAEFNDNDALAYGLKIGYKF 429
>gi|88192831|pdb|2F1T|A Chain A, Outer Membrane Protein Ompw
gi|88192832|pdb|2F1T|B Chain B, Outer Membrane Protein Ompw
gi|88192833|pdb|2F1T|C Chain C, Outer Membrane Protein Ompw
gi|88192834|pdb|2F1V|A Chain A, Outer Membrane Protein Ompw
gi|88192835|pdb|2F1V|B Chain B, Outer Membrane Protein Ompw
gi|88192836|pdb|2F1V|C Chain C, Outer Membrane Protein Ompw
gi|88192837|pdb|2F1V|D Chain D, Outer Membrane Protein Ompw
gi|88192838|pdb|2F1V|E Chain E, Outer Membrane Protein Ompw
gi|88192839|pdb|2F1V|F Chain F, Outer Membrane Protein Ompw
Length = 197
Score = 35.2 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 89 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 146
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 147 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 191
>gi|330993344|ref|ZP_08317279.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
gi|329759374|gb|EGG75883.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
Length = 368
Score = 35.2 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 27/212 (12%), Positives = 59/212 (27%), Gaps = 28/212 (13%)
Query: 55 SGNYVGLHISRLYETH---------PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
+G YVG+ A+ + + +G + +
Sbjct: 26 TGPYVGIGGGYDLTQTQHMHDADLKNGANGNDDGGQHVRHGHGWTGFANVGWGFGNGLRA 85
Query: 106 -INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD---------SLLIYGMGGFGGAY 155
+ + S + + + Y +D + + G G +
Sbjct: 86 EVEGAYSWTAITSVDAEKTKGHDRSYGGFVNVLYDIDLKRLFGIDVPVTPFVGAGAGYLW 145
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIH 211
+ K G F G ++G D + ++ YR + +
Sbjct: 146 ENANVTGMSSGAQMKGTNGSFAYQG---IVGAAYDIPGVSGLQMTTEYRMVGQVEDFGMG 202
Query: 212 SVNNSNAK-SDVERVDRKGNAHIASLGINMHF 242
+++ S + ER D + N H +G+ F
Sbjct: 203 NIHASGGGYTSAERFDHRFN-HEFIVGVRYAF 233
>gi|255693463|ref|ZP_05417138.1| putative hemin receptor [Bacteroides finegoldii DSM 17565]
gi|260620747|gb|EEX43618.1| putative hemin receptor [Bacteroides finegoldii DSM 17565]
Length = 553
Score = 35.2 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 53/192 (27%), Gaps = 16/192 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD- 115
Y+GL I Y T + Y G E G+ +Q + + G
Sbjct: 261 FYLGLTIG-AYSIDYNKYTSYDEDY--------GNETGYKLQGWNKITGSGFDFKFGAIL 311
Query: 116 -DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ + I+ V Y + + + ++ + K+
Sbjct: 312 RPFEYSPFRIGLAIHTPVFYSLDYKTSVFMQSDIWDPVANEITYRDIDSRDYLPGKDDMV 371
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV-----ERVDRKG 229
+ + + L Y V ++L A Y Y + + + +
Sbjct: 372 QRFRFQTPWTYNVSLGYTVGNSLALGAEYEYQDYSSIKFRDPDGYASAFEWENSTTPMLK 431
Query: 230 NAHIASLGINMH 241
H A LG+
Sbjct: 432 GVHTARLGLEYK 443
>gi|240015779|ref|ZP_04722319.1| putative TonB-dependent receptor protein, iron related [Neisseria
gonorrhoeae FA6140]
Length = 733
Score = 35.2 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 19/76 (25%)
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ AG A A + ++ L G+++
Sbjct: 257 TRVHAGMDYQQAKETADAPLSYAVYDSQGYATAFGPKDNPATNWSNSRNRALNLFAGIEH 316
Query: 192 MVNYDISLSASYRYIP 207
N D L A Y Y
Sbjct: 317 RFNQDWKLKAEYDYTR 332
>gi|218264630|ref|ZP_03478402.1| hypothetical protein PRABACTJOHN_04108 [Parabacteroides johnsonii
DSM 18315]
gi|218221878|gb|EEC94528.1| hypothetical protein PRABACTJOHN_04108 [Parabacteroides johnsonii
DSM 18315]
Length = 316
Score = 35.2 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 54/186 (29%), Gaps = 19/186 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YV ++ + + NG+ +LG++ FG + K
Sbjct: 150 FYV--NVGYAFIISKF---YLPSGTSGNPKNGMDWQLGYDWVARSG-FGAGLMYSGYKSS 203
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
T+ + K Y ++ G G +++K
Sbjct: 204 FTYSNVDVKVG--------LAYVAPQFVMKQKVGRWGIEEKFGIGYFKYRESAKGTSASL 255
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
G G +Y ++ + + A+ YI + +++ + + +
Sbjct: 256 SG--VGYDFLFGAEYYLSDHVGIGANLGYIGGSLPKQDSAEYGDEEHTGIFRLHID---A 310
Query: 237 GINMHF 242
G+ HF
Sbjct: 311 GVRFHF 316
>gi|66866385|gb|AAY57842.1| outer membrane protein J [Moraxella catarrhalis]
Length = 191
Score = 35.2 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 21/166 (12%), Positives = 47/166 (28%), Gaps = 21/166 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD- 116
YVG I ++ GI G+N FG +
Sbjct: 35 YVGAKIGQVDAKQINGKNT-----------AYGIYAGYNFDQN---FGAEAEFVGSDAKE 80
Query: 117 ------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + GDV Y + + + + + +
Sbjct: 81 FDVTVPAVGTTPAVVLPVKGDVKSFGAYGTYRYNFINTPFYAKGKLGIAKTKVDVTGRNA 140
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
A +++ G+G+ + ++ + ASY Y+ ++++
Sbjct: 141 TASYSNKSDETNLAGGVGVGFKPLANVGVEASYNYLSEDANAISLG 186
>gi|325133821|gb|EGC56477.1| surface protein A [Neisseria meningitidis M13399]
Length = 174
Score = 35.2 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 12/72 (16%)
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
F + + + G+ Y V ++ L A YRY + +
Sbjct: 115 GGSDSFSQTSTGLGVFAGVSYAVTPNVDLDAGYRYNYIGKVNTVKN------------VR 162
Query: 231 AHIASLGINMHF 242
+ S+G+ + F
Sbjct: 163 SGELSVGVRVKF 174
>gi|218515999|ref|ZP_03512839.1| probable heat resistant agglutinin 1 protein [Rhizobium etli 8C-3]
Length = 102
Score = 35.2 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 11/100 (11%), Positives = 29/100 (29%), Gaps = 14/100 (14%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
+F ++++ ++ + DL I + +G Y+ + +
Sbjct: 1 MSGIFAALLIATNAYSADLAPAEPIPEQP--------PEVAVTEATGWYLRGDVGYAFTD 52
Query: 70 HPLADTINRKTYNSLLPNGLG------IELGHNIQLEDFV 103
A N + + I G Q+ ++
Sbjct: 53 LRGARYFQGSNANEVDFDDADLDDAWTIGGGVGYQINSYL 92
>gi|229593239|ref|YP_002875358.1| hypothetical protein PFLU5871 [Pseudomonas fluorescens SBW25]
gi|229365105|emb|CAY53321.1| putative exported protein [Pseudomonas fluorescens SBW25]
Length = 221
Score = 35.2 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
YGM G G A + + E+ H + +G+GL+ V+ I+L A YR
Sbjct: 124 FYGMAGVGVARIEAEGYQTNETRR----FASNRQHHFAYSVGMGLEAKVSEQITLGAGYR 179
Query: 205 YIPHHIHSVNNSNAKSDVERVD 226
YI + + V D
Sbjct: 180 YIAMGDIETGYNTFANRVNARD 201
>gi|167836554|ref|ZP_02463437.1| OmpW family protein [Burkholderia thailandensis MSMB43]
Length = 241
Score = 35.2 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 29/120 (24%), Gaps = 13/120 (10%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDS-----------SLEKVESDNSKNAKGRFDGHGSSVV 184
G S L Y G + + + + V
Sbjct: 122 FGESQARLRPYVGVGISYVWFKNVELSSPIATGQFLASPTTGTALEGPTSASLKSSFAPV 181
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS--LGINMHF 242
+ GL Y ++ S+ S Y + +++ K + + + F
Sbjct: 182 VNAGLTYNIDKHWSVGVSVSYAWLSTTATLTTHSALGSVSTSAKVKINPLVSFVSVGYRF 241
>gi|156978100|ref|YP_001449006.1| outer membrane protein W [Vibrio harveyi ATCC BAA-1116]
gi|156529694|gb|ABU74779.1| hypothetical protein VIBHAR_06904 [Vibrio harveyi ATCC BAA-1116]
Length = 213
Score = 35.2 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S Y G D + D + +GLDYM+N
Sbjct: 111 FGDSQSKFRPYVGAGLNYTIFFDEGFNSTGKGAGLSDLKLDDS--FGLAANVGLDYMIND 168
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + ++ D + N + + F
Sbjct: 169 KWFLNASAWYANIETEATYKAGG--AKQKTDVEINPWVFMISGGYKF 213
>gi|84385764|ref|ZP_00988794.1| Outer membrane protein [Vibrio splendidus 12B01]
gi|84379080|gb|EAP95933.1| Outer membrane protein [Vibrio splendidus 12B01]
Length = 198
Score = 35.2 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 48/196 (24%), Gaps = 30/196 (15%)
Query: 55 SGNYVGLHISR-LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
SG Y+G I + L I G+ Q V + T
Sbjct: 25 SGFYLGGAIGTSGIDDGGLYKNTQAPITVDAEDPTYKIIAGY--QFNRIV-ALEAQYTKY 81
Query: 114 KDDSTFYRLKEKY----FIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDN 168
D L + + GY+ D+ + +G+ G + S
Sbjct: 82 GDVVAKNALSQFTYTWSPTAFSISANLGYTFDNGIRPFGIIGLSSIDLDQSLPMLD---- 137
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNY--DISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D G + G G++Y ++S Y + D
Sbjct: 138 --------DDRGEGIRYGFGVEYTPRQLGNVSFKLGY-------EADAFVIESDSAFEND 182
Query: 227 RKGNAHIASLGINMHF 242
+ + F
Sbjct: 183 KDIVIDSFYAAVAYRF 198
>gi|325529051|gb|EGD06057.1| OmpW family protein [Burkholderia sp. TJI49]
Length = 241
Score = 35.2 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 15/193 (7%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTF 119
P+ ++ + L + G+ + +F+ GI T S F
Sbjct: 49 YGVGGTPINQSVPNTGAGISDADTLALATGYFVTDHIATEFIAGIPPKFDITGKGQFSNF 108
Query: 120 YRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGR 175
L Y ++LK + + Y G + + E+
Sbjct: 109 GTLGRAYQWSPALLLKYYFNDANAKFRPYLGVGATYVWFTGAKITNSAFENGVLGGPTSA 168
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ + V G Y S+ YIP + + + ++ V + AHI+
Sbjct: 169 TTSNQWAPVFNAGFTYNFTKHWFAGFSFSYIPVSVTATFTTARRTPVGTLTETSKAHISL 228
Query: 236 ------LGINMHF 242
L + F
Sbjct: 229 NPIVTYLNVGYRF 241
>gi|197335500|ref|YP_002156806.1| accessory colonization factor AcfA [Vibrio fischeri MJ11]
gi|197316990|gb|ACH66437.1| accessory colonization factor AcfA [Vibrio fischeri MJ11]
Length = 212
Score = 35.2 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 25/173 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYN-----SLLPNGLGIELGHNIQLEDFVFG---INCH 109
YVGL +H + T + T + + G +G+ G
Sbjct: 21 YVGLEYGLTNMSHDYSTTFSETTGDVTLTPDDSSSSFGGFVGYRFNDFGLELGYKKFESD 80
Query: 110 TTAAKDDSTFYRLKEKYFIYG-------DVVLKAGYSVDSLLIYGMG-GFGGAYVIDSSL 161
+ K S Y ++ + + Y+++ L G G +S
Sbjct: 81 DSQNKVLSYAYPVETEREWDADLDATQITLKPVYFYNINEKLQLKTGLGLTYTQYKYNSS 140
Query: 162 EKVESDNSKN---------AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
E++N A + +G++YMV +++L AS Y
Sbjct: 141 AYTETENDLTDQETISDYVAGDSKSESVFGGIASVGIEYMVIPNLALGASASY 193
>gi|189467217|ref|ZP_03016002.1| hypothetical protein BACINT_03601 [Bacteroides intestinalis DSM
17393]
gi|189435481|gb|EDV04466.1| hypothetical protein BACINT_03601 [Bacteroides intestinalis DSM
17393]
Length = 443
Score = 35.2 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 24/82 (29%), Gaps = 4/82 (4%)
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR---YIPHHIHSVNNSNAKS 220
+ S N + S LG G + +L+ Y Y + S N +N
Sbjct: 363 TDYGLSDNYQSDTSFSCDSYTLGFGAKLNLTERAALNVGYMWTTYDDYTKKSQNYNNTGL 422
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+ + IN F
Sbjct: 423 SGTNI-YSRTNKVFGASINYRF 443
>gi|53714644|ref|YP_100636.1| putative outer membrane protein [Bacteroides fragilis YCH46]
gi|52217509|dbj|BAD50102.1| putative outer membrane protein [Bacteroides fragilis YCH46]
Length = 401
Score = 35.2 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 15/101 (14%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV------VLGIGLDYMVNYDISL 199
Y + G Y D + + S +S + D S V +G GL Y N +L
Sbjct: 221 YLVAGAVYGYSQDLAQDNTLSVSSTSGNESIDESQSHVRQCLPQFVGAGLAYN-NPRWTL 279
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ Y+Y + SN + + N H S G
Sbjct: 280 TVEYKYTDWSRMKSSQSNVRFE--------NQHRLSAGTAY 312
>gi|84503497|ref|ZP_01001552.1| hypothetical protein OB2597_14259 [Oceanicola batsensis HTCC2597]
gi|84388175|gb|EAQ01128.1| hypothetical protein OB2597_14259 [Oceanicola batsensis HTCC2597]
Length = 220
Score = 35.2 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 54/187 (28%), Gaps = 21/187 (11%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH----TTAAKDDSTFY 120
++ I + + LP G+ + + FG+ A + +
Sbjct: 46 GTASGGAYSNLIGWEGKSLSLPPYYGLRATW-WRPSNIGFGVEMTHTKVYAPAAEMPAGF 104
Query: 121 RLKEKYFIYGDVVLKAGYSVDSL-----LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
E + V Y GG G A + V+ N
Sbjct: 105 SRLEFTDGHNIVTANVSRRWPGAWGKLVTPYVSGGVGFA------MPHVDVTEGGNVTYG 158
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ G + L G Y +N + S+ Y++ + + ++ + + +
Sbjct: 159 YQVTGPAARLTAGAKYQINENWSVFGEYQFTWSENDA-----DLAGGGSLNTRIITNALN 213
Query: 236 LGINMHF 242
+G+ F
Sbjct: 214 VGVGFSF 220
>gi|62180298|ref|YP_216715.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62127931|gb|AAX65634.1| outer membrane protein W; colicin S4 receptor; putative transporter
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 212
Score = 35.2 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKNAGLSDLSFKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D + AS Y+ + + V + S G F
Sbjct: 168 DWLIGASVWYMDIDTTANYKMGGVQHHDSVRLDPWVFMFSAG--YRF 212
>gi|5825539|gb|AAD53284.1|AF175681_1 surface protein A [Neisseria meningitidis]
gi|254670342|emb|CBA05762.1| Opacity protein and related surface antigens [Neisseria
meningitidis alpha153]
gi|308388848|gb|ADO31168.1| outer membrane protein [Neisseria meningitidis alpha710]
gi|325129806|gb|EGC52614.1| surface protein A [Neisseria meningitidis OX99.30304]
gi|325143948|gb|EGC66258.1| surface protein A [Neisseria meningitidis M01-240013]
gi|325202540|gb|ADY97994.1| surface protein A [Neisseria meningitidis M01-240149]
gi|325206491|gb|ADZ01944.1| surface protein A [Neisseria meningitidis M04-240196]
gi|325207710|gb|ADZ03162.1| surface protein A [Neisseria meningitidis NZ-05/33]
Length = 174
Score = 35.2 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
F + + + G+ Y V ++ L A YRY +
Sbjct: 115 GGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNT 157
>gi|301307626|ref|ZP_07213583.1| conserved hypothetical protein [Bacteroides sp. 20_3]
gi|300834300|gb|EFK64913.1| conserved hypothetical protein [Bacteroides sp. 20_3]
Length = 317
Score = 35.2 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 22/183 (12%), Positives = 52/183 (28%), Gaps = 19/183 (10%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
+I + T + NGL ++G++ + FG + K +
Sbjct: 153 ANIGYAFVTSKFYLPPGGSGHPK---NGLDWQVGYDW-ISRSGFGAGLLYSGYKSSYIYS 208
Query: 121 RLKEKYF-IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ Y ++ ++ G G +S+ E
Sbjct: 209 GIDINVGLTYVAPQFVMKQIINRWIVEEKIGIGYFSYRESARGISE-----------SLS 257
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G +G +Y+++ + + + Y+ + N + + G+
Sbjct: 258 GVGYNFSLGAEYLLSKHVGVGLNIGYVGGSLPKQENVSYDKGDYSGLFRLTFD---AGVR 314
Query: 240 MHF 242
HF
Sbjct: 315 FHF 317
>gi|261212869|ref|ZP_05927153.1| outer membrane protein W precursor [Vibrio sp. RC341]
gi|260837934|gb|EEX64611.1| outer membrane protein W precursor [Vibrio sp. RC341]
Length = 214
Score = 35.2 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 29/107 (27%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S + Y G D ++ + D + G DY +N
Sbjct: 112 FGESGSTFRPYVGAGLNYTTFFDEGFNSTGNNATLTDLKLDDSW--GLAANAGFDYKLNE 169
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + + D K N + + F
Sbjct: 170 SWFLNASVWYANIETTATYKFGG--AAQSTDVKINPWVFMIAGGYTF 214
>gi|257465286|ref|ZP_05629657.1| porin opacity type [Actinobacillus minor 202]
gi|257450946|gb|EEV24989.1| porin opacity type [Actinobacillus minor 202]
Length = 200
Score = 35.2 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 56/197 (28%), Gaps = 27/197 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN-----IQLEDFVFGINCH 109
+ Y ++ + + + + + +G+ L+ +G
Sbjct: 22 TNWYAEGNLGYS----KVKTSGLAYSELNDSAFTPSVAVGYRLNDLRFALDYTHYGKASD 77
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVI-DSSLEKVE 165
+ D + I V A Y +D SL Y + +S+ +V
Sbjct: 78 SYVVNADDSVISNNFDLKIQ-SVGFSALYDIDLGSSLKPYVGVRLALNKIKENSNYTEVS 136
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ ++ +G Y + + +++A+ Y
Sbjct: 137 TGYTERGSESESYTKVGYGAVLGATYDLTPNWAVNANIEYNRLGKVD------------- 183
Query: 226 DRKGNAHIASLGINMHF 242
D K N + +G+ F
Sbjct: 184 DVKINQYGTKIGVRYSF 200
>gi|120436221|ref|YP_861907.1| secreted protein [Gramella forsetii KT0803]
gi|117578371|emb|CAL66840.1| secreted protein [Gramella forsetii KT0803]
Length = 179
Score = 35.2 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 59/184 (32%), Gaps = 29/184 (15%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
G + L + + ++R + +G + ++F G+ + T
Sbjct: 25 FGANAGYLNINASVENEVDRINVSESASGFYIGAIGELMLSQNF--GLEAAVNYGNVEET 82
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+ + V + A V +Y G ++++ + +
Sbjct: 83 NFLM---------VPVLAKLYVAQSKVYFQAGPQVTFLLEDTFGFL-------------- 119
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ + L G+ Y +N + +S Y Y + + + + D G H ++G+
Sbjct: 120 NTVGIDLSGGVGYDINENFFVSGRYSYEITNRIPSKHRDGVYE----DINGQYHSLNIGL 175
Query: 239 NMHF 242
F
Sbjct: 176 GYKF 179
>gi|297185479|gb|ADI24119.1| outer membrane protein W [Aeromonas hydrophila]
Length = 203
Score = 35.2 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 20/195 (10%), Positives = 60/195 (30%), Gaps = 24/195 (12%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-------FGIN----CH 109
H + + ++ +T + + +E+ N+QL + +G+
Sbjct: 20 AHQAGDFLVRGGLAFVSPQTSSDNVLGTGELEIDSNMQLGLTLSYLITDNWGVELLAATP 79
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + + + + + ++ + G + + Y G ++ +
Sbjct: 80 FSHSVSTAGLGEVAKVKHLPPTLMAQYYFGDANSKVRPYIGAGI-----NYTTFFDEQGR 134
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ + + +GLD +N ++AS I + + V ++
Sbjct: 135 GALDGTDVSVDSSWGMAGQVGLDMAINDRWFVNASAWIIDIDT------DVHTAVGTINT 188
Query: 228 KGNAHIASLGINMHF 242
+ G+ F
Sbjct: 189 SIDPMAFMFGVGYRF 203
>gi|229527062|ref|ZP_04416457.1| hypothetical protein VCG_000128 [Vibrio cholerae 12129(1)]
gi|229335459|gb|EEO00941.1| hypothetical protein VCG_000128 [Vibrio cholerae 12129(1)]
Length = 444
Score = 35.2 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 16/123 (13%)
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI------ 187
AGY++ ++ Y + G + + G ++G
Sbjct: 324 AIAGYTLGNVTPYVIYG--RFNPKNPPYQAQSDWGLSPVNGAQLAEVQKWLIGGINSTYI 381
Query: 188 -------GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG-NAHIASLGIN 239
G+ + V I+L A Y YI + + + +G + + S+ +N
Sbjct: 382 DQQTFSLGVRWDVTPQIALKAQYDYIQIADNGYGLWAIPLEADLQGLQGRDVQLFSVSVN 441
Query: 240 MHF 242
F
Sbjct: 442 FVF 444
>gi|156977032|ref|YP_001447938.1| hypothetical protein VIBHAR_05817 [Vibrio harveyi ATCC BAA-1116]
gi|156528626|gb|ABU73711.1| hypothetical protein VIBHAR_05817 [Vibrio harveyi ATCC BAA-1116]
Length = 414
Score = 35.2 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 34/97 (35%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y GG + + D G+ Y + +++ A + +
Sbjct: 317 YSFGGTYTLNSEWTLRAGIAYDEQAGEATLSIPDSDRFWYSAGVTYAMKENLTFDAGFAF 376
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S +NA + D +G A+I+++ +N F
Sbjct: 377 VKSKSGSFTETNALKEEITFDSEGTAYISAVQVNYIF 413
>gi|16765076|ref|NP_460691.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161613778|ref|YP_001587743.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167553713|ref|ZP_02347460.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167994637|ref|ZP_02575728.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|194445417|ref|YP_002040985.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|197265074|ref|ZP_03165148.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198244646|ref|YP_002215410.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389994|ref|ZP_03216605.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205352595|ref|YP_002226396.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856756|ref|YP_002243407.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|25090848|sp|Q8ZP50|OMPW_SALTY RecName: Full=Outer membrane protein W; Flags: Precursor
gi|16420263|gb|AAL20650.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161363142|gb|ABX66910.1| hypothetical protein SPAB_01512 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404080|gb|ACF64302.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|197243329|gb|EDY25949.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197939162|gb|ACH76495.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602439|gb|EDZ00985.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205272376|emb|CAR37256.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205321906|gb|EDZ09745.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205327511|gb|EDZ14275.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|206708559|emb|CAR32880.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261246921|emb|CBG24738.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267993677|gb|ACY88562.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158259|emb|CBW17758.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312912723|dbj|BAJ36697.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321224362|gb|EFX49425.1| Outer membrane protein W precursor [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|332988621|gb|AEF07604.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 212
Score = 35.2 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKNAGLSDLSFKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D + AS Y+ + + V + S G F
Sbjct: 168 DWLIGASVWYMDIDTTANYKMGGVQHHDSVRLDPWVFMFSAG--YRF 212
>gi|299141391|ref|ZP_07034528.1| outer membrane protein [Prevotella oris C735]
gi|298577351|gb|EFI49220.1| outer membrane protein [Prevotella oris C735]
Length = 425
Score = 35.2 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 7/81 (8%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVGL + + ++ G G+ + VF I +
Sbjct: 45 GWYVGLRGG---LSGGTSTFVSAAADKYRPGWNAGFSGGYRF---NSVFSIEGILKWGEV 98
Query: 116 DSTFYRLKEKYF-IYGDVVLK 135
+ G +++
Sbjct: 99 TLGVRKGDVGANYWLGSDLVR 119
>gi|224583776|ref|YP_002637574.1| outer membrane protein W [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468303|gb|ACN46133.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|322714772|gb|EFZ06343.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 212
Score = 35.2 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S + Y G D+ + + D +G+DY++N
Sbjct: 110 FGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKNAGLSDLSFKDSW--GAAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D + AS Y+ + + V + S G F
Sbjct: 168 DWLIGASVWYMDIDTTANYKMGGVQHHDSVRLDPWVFMFSAG--YRF 212
>gi|165920940|ref|ZP_02219610.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
gi|165916788|gb|EDR35392.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
Length = 250
Score = 35.2 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 55/183 (30%), Gaps = 29/183 (15%)
Query: 56 GNYVGLHISRLYETHP-------------LADTINRKTYNSLLPNGLGIELGHNIQLEDF 102
G ++GL T+ + ++ + + +G ELG+ + +
Sbjct: 35 GFHIGLGFGYKSYTYDQLGTVTVTTDGGTILSVLHPVSASITQFGPVG-ELGYTFASDWW 93
Query: 103 VFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGG 153
+ G+ + + + +L AG V+ +Y G+
Sbjct: 94 IAGVKAQYQYDNVRSVHIMDASLVGSTYRTRLGSHLTAMLLAGIKVNEANAVYLEAGYST 153
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + + + + GIG + ++ L SY Y + S
Sbjct: 154 VWGKTTLFDP------GPVAVSMKNRLNGGIAGIGWRHYFMNNVFLDLSYDYALYRSKSN 207
Query: 214 NNS 216
+ +
Sbjct: 208 SVT 210
>gi|77359154|ref|YP_338729.1| hypothetical protein PSHAa0183 [Pseudoalteromonas haloplanktis
TAC125]
gi|76874065|emb|CAI85286.1| putative outer membrane protein; signal peptide [Pseudoalteromonas
haloplanktis TAC125]
Length = 354
Score = 35.2 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 51/188 (27%), Gaps = 39/188 (20%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN-CHTTAAK 114
G Y+G+ + + N G E+G+ + + +
Sbjct: 27 GFYIGVFGDYYDASWKNLNMHQNLEVN--ESASWGAEVGYRF-SDYWSARLEYADMDFNA 83
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ + G+ + G L + GG ++ + NA
Sbjct: 84 FLKNPIPNGNRNDVDGE---RFGVD---ALYHFGGGPFYGLFGIKEVKVATDNTFLNA-- 135
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G+G + + + ++A S + +DR A
Sbjct: 136 -----------GVGYQHFITDGLFVNAE----------------TSVYQGLDRGYTDVNA 168
Query: 235 SLGINMHF 242
LGIN F
Sbjct: 169 KLGINYLF 176
>gi|58699439|ref|ZP_00374186.1| outer surface protein precursor [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630796|ref|YP_002727587.1| surface antigen Wsp [Wolbachia sp. wRi]
gi|2687526|gb|AAC46300.1| outer surface protein precursor [Wolbachia sp. wRi]
gi|58534046|gb|EAL58298.1| outer surface protein precursor [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225592777|gb|ACN95796.1| surface antigen Wsp [Wolbachia sp. wRi]
Length = 230
Score = 35.2 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 51/175 (29%), Gaps = 19/175 (10%)
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG- 137
+N L + + +++D + + + + + +G
Sbjct: 64 DIHNPLKASFIAGGGAFGYKMDDIRVDVEGLYSQLNKNDVTGAAFNPDTVADSLTAISGL 123
Query: 138 ----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
Y + + Y G G AY+ + V SK + G+
Sbjct: 124 VNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKAGV 175
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA--SLGINMHF 242
Y V ++ L A RY + A + ++ + K G+ +F
Sbjct: 176 SYDVTPEVKLYAGARYFGSFGAHFDKDTAAASKDKGELKVLYSTVGAEAGVAFNF 230
>gi|260910533|ref|ZP_05917201.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635375|gb|EEX53397.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 570
Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 47/142 (33%), Gaps = 17/142 (11%)
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD------STFYRLKEKYF 127
T + N P LGI L N QL + FG T K + +K
Sbjct: 398 TGLGEKGNHHRPITLGISL--NKQLSPRWTFGTGLTYTRLKSEFESKYLGATLNKTQKVD 455
Query: 128 IYG---DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG----HG 180
G + + + Y GG + SSL K + + ++ +
Sbjct: 456 YLGIPLRLTYRLW-ANGRFNTYTTGGVTFELPVYSSLAKKYTVTADSSYSLRESIKVHSQ 514
Query: 181 SSVVLGIGLDYMVNYDISLSAS 202
SV LG+G+ Y + S+
Sbjct: 515 WSVNLGVGVQYRLFKPFSIYLE 536
>gi|259908978|ref|YP_002649334.1| outer membrane protein X [Erwinia pyrifoliae Ep1/96]
gi|224964600|emb|CAX56113.1| Virulence-related outer membrane protein X [Erwinia pyrifoliae
Ep1/96]
gi|310767120|gb|ADP12070.1| Outer membrane protein X precursor [Erwinia sp. Ejp617]
Length = 169
Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 42/180 (23%), Gaps = 28/180 (15%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
+ + Y + G L + + G T + D T
Sbjct: 18 AGSAMAQSTVTGGYAQSDYQGVANKANGFNLKYRYENGSDPLGWIGSFTYTEKDRTENGD 77
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
K YG A D IYG+ G G + + + +
Sbjct: 78 YIKGQYYGITGGPAYRLNDWASIYGVVGVGFGKFQAT----------GEDRFQSSSSDAG 127
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G GL + ++L Y R + + G+ F
Sbjct: 128 FSYGAGLQFNPMEHVALDVGYEQSRI------------------RSVDVGTWTAGVGYSF 169
>gi|194099898|ref|YP_002003035.1| protein II [Neisseria gonorrhoeae NCCP11945]
gi|193935188|gb|ACF31012.1| protein II [Neisseria gonorrhoeae NCCP11945]
Length = 274
Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 15/84 (17%)
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
S + + G V G+G+D ++L A YRY
Sbjct: 206 SVPGAAVGKPAYHESRSISSLGFGAVAGVGIDVA--PGLTLDAGYRYHYWGRLE------ 257
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ + H ASLG+ F
Sbjct: 258 -------NTRFKTHEASLGVRYRF 274
>gi|323172388|gb|EFZ58025.1| outer membrane protein W [Escherichia coli LT-68]
gi|332759283|gb|EGJ89591.1| outer membrane protein W [Shigella flexneri 2747-71]
Length = 184
Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + Y G D+ + + D +G+DY++N
Sbjct: 82 FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSW--GAAGQVGVDYLINR 139
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 140 DWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAG--YRF 184
>gi|129164|sp|P25253|OMPX_ENTCL RecName: Full=Outer membrane protein X; Flags: Precursor
gi|148370|gb|AAA24808.1| outer membrane protein X precursor [Enterobacter cloacae]
Length = 172
Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 41/136 (30%), Gaps = 8/136 (5%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
T + + ++ G L + + ++ G+ T + D T K
Sbjct: 24 ATSTVTGGYAQSDMQGVMNKTNGFNLKYRYEQDNNPLGVIGSFTYTEKDRTENGSYNKGQ 83
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
YG A D IYG+ G G + + + G
Sbjct: 84 YYGITAGPAYRLNDWASIYGVVGVGYGKFQQTENQGLNR--------TASNSDYGFSYGA 135
Query: 188 GLDYMVNYDISLSASY 203
G+ + +++L SY
Sbjct: 136 GMQFNPIENVALDFSY 151
>gi|332975957|gb|EGK12830.1| outer membrane protein J [Psychrobacter sp. 1501(2011)]
Length = 188
Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 53/180 (29%), Gaps = 19/180 (10%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNG-------LGIELGHNIQLEDFVFGINCHTT 111
VG + Y A +G G+ G FG+
Sbjct: 19 VGAQAAVNYGNTMTAQPYIGAKVGQYDLDGAKDTGTAYGVYGGAKFTPN---FGLEAEYL 75
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ + YG + A Y+ + G +G + + E S
Sbjct: 76 TTSDEDFNNVTEYSADTYG-LYATADYAFPNT----GGLYGKGRLGVAKNEVDLESKSNT 130
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
K D + V G+GL Y + + S+ A Y + P +V N D V +
Sbjct: 131 VKVSSDYSDTGVAGGLGLGYNIAPNASVEAMYNWYP----TVEIGNTDYDASGVSLGAHF 186
>gi|269214324|ref|ZP_05986340.2| opacity protein opA58 [Neisseria lactamica ATCC 23970]
gi|269210226|gb|EEZ76681.1| opacity protein opA58 [Neisseria lactamica ATCC 23970]
Length = 243
Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 19/63 (30%), Gaps = 13/63 (20%)
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G+ + +++L YRY + + H ASLG+
Sbjct: 194 RVGFGAVAGVGIDITPNLTLDTGYRYHYWGHLE-------------NTRFKTHEASLGVR 240
Query: 240 MHF 242
F
Sbjct: 241 YRF 243
>gi|257454810|ref|ZP_05620061.1| putative membrane protein [Enhydrobacter aerosaccus SK60]
gi|257447743|gb|EEV22735.1| putative membrane protein [Enhydrobacter aerosaccus SK60]
Length = 509
Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 30/99 (30%)
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
YS D+ G + + S + N + +G+G Y + +
Sbjct: 406 YSKDAWTAEVGLGKKLSPQLAISGAVGYDSGAGNPITSLGPVEGNWNVGLGAKYNLTPEW 465
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
++S +Y+ + + D G + L
Sbjct: 466 AVSGGVKYLMFGDAKAKLPDGSIVGDFQDNDGWVYGVRL 504
>gi|255534962|ref|YP_003095333.1| hypothetical protein FIC_00818 [Flavobacteriaceae bacterium
3519-10]
gi|255341158|gb|ACU07271.1| hypothetical protein FIC_00818 [Flavobacteriaceae bacterium
3519-10]
Length = 198
Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 58/183 (31%), Gaps = 10/183 (5%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G + T + T ++ + +G+ + G T K++
Sbjct: 26 GFAQGSTFITGAVGYTSESFMDETVSGFTISPSVGY-FVSPNIAVGAKLGYTNTKEEEGS 84
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ F G I+ G + +D++ + +
Sbjct: 85 FEATSDIFTAGLFGRYYWMPQSKFSIFAELGADYRNI--------TADSNVPNFTEYKAN 136
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G V L G++Y +N + +L A + + + A++ E + N + +LG+
Sbjct: 137 GFGVQLAPGMNYFLNSNFALEAKTGVLGYSSDKPDYDGAEAT-ENFNIGLNLNDITLGLV 195
Query: 240 MHF 242
F
Sbjct: 196 YKF 198
>gi|153828525|ref|ZP_01981192.1| hypothetical protein A59_A0518 [Vibrio cholerae 623-39]
gi|148876076|gb|EDL74211.1| hypothetical protein A59_A0518 [Vibrio cholerae 623-39]
Length = 199
Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 52/172 (30%), Gaps = 13/172 (7%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAKD 115
Y+GL +S + I+ + + +G G+ G+ V +
Sbjct: 33 FYIGLGLSFANTIMLESGGISLEENSDFGKSGFGLSAGYEFTTHKQVSIDVEAEYRQLGK 92
Query: 116 DSTFYRLKEKY-FIYGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ L ++ +V K Y + + GG G V S ++
Sbjct: 93 VNYSNILDVSGSGVFVNVKPKLFVNYEFGDVYLAPFGGVGLVKVDAKSPINNIAE----- 147
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
LGI L + VN + + YR + SV S +
Sbjct: 148 ----SETELGYQLGIELGFKVNRSMDIMIGYRSAQVEVDSVTTSFGNGYLGG 195
>gi|49081980|gb|AAT50390.1| PA4067 [synthetic construct]
Length = 233
Score = 35.2 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 4/100 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
YG G A D L ++ D + +G DYM+N + +
Sbjct: 135 PYGGLGVNYATFFDEDLASNRKAQGFSSMKLQDSW--GLAGELGFDYMLNEHALFNMAVW 192
Query: 205 YIPHHIHSVNNSNAKSDV--ERVDRKGNAHIASLGINMHF 242
Y+ + N + V +VD + + +G F
Sbjct: 193 YMDIDTKASINGPSALGVNKTKVDVDVDPWVYMIGFGYKF 232
>gi|60682658|ref|YP_212802.1| hypothetical protein BF3189 [Bacteroides fragilis NCTC 9343]
gi|60494092|emb|CAH08884.1| putative exported protein [Bacteroides fragilis NCTC 9343]
Length = 401
Score = 35.2 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 15/101 (14%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV------VLGIGLDYMVNYDISL 199
Y + G Y D + + S +S + D S V +G GL Y + +L
Sbjct: 221 YLVAGAVYGYSQDLAQDNTLSVSSTSGNESIDESQSHVRQCLPQFVGAGLAYN-SPRWTL 279
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+A Y+Y + SN + + N H S G
Sbjct: 280 TAEYKYTDWSRMKSSQSNVRFE--------NQHRLSAGTAY 312
>gi|320450910|ref|YP_004203006.1| hypothetical protein TSC_c18430 [Thermus scotoductus SA-01]
gi|320151079|gb|ADW22457.1| conserved hypothetical protein [Thermus scotoductus SA-01]
Length = 951
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 14/131 (10%)
Query: 55 SGNYVGLHISR---------LYETHPLADTINRKTYNSLLPNGLGIELGHNIQL----ED 101
+G Y+GL+ S Y + + P + LG++++
Sbjct: 476 TGPYLGLYASYRERDYALQLGYTAAET-RRLLASIQGTFPPWEGSLGLGYDVEQRRLDGR 534
Query: 102 FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
F + + + K G + +K G+ ++ GG+ YV
Sbjct: 535 FGLAYREGILGLGLEGRYAQGTLKLAALGALEVKGGFDTPEEVVQAFGGWATGYVEGLVF 594
Query: 162 EKVESDNSKNA 172
D K
Sbjct: 595 HDRNRDGIKGP 605
>gi|317163488|gb|ADV07029.1| outer membrane protein [Neisseria gonorrhoeae TCDC-NG08107]
Length = 303
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 22/68 (32%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++N + + G+ + + +++L A YRY
Sbjct: 156 NGAVTTYNTDPKTQNDYQSNSIRRVGLGVIAGIGFDITPNLTLDAGYRYHNWGRLENTRF 215
Query: 217 NAKSDVER 224
A++ E
Sbjct: 216 TAQAAGEG 223
>gi|262281498|ref|ZP_06059278.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257086|gb|EEY75824.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 417
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV--NNSNAKSDVERVDRKG-NA 231
D +GL Y + + +++Y ++ + + N + D + +
Sbjct: 271 ENDETKMGWGAALGLRYKITPSLLFNSNYSHVSGDNKLLLATSDNVRHIQNGDDIELIDF 330
Query: 232 HIASLGINMHF 242
+G+ F
Sbjct: 331 DAFQMGLTYQF 341
>gi|194097944|ref|YP_002000990.1| outer membrane protein [Neisseria gonorrhoeae NCCP11945]
gi|254493137|ref|ZP_05106308.1| surface protein A [Neisseria gonorrhoeae 1291]
gi|193933234|gb|ACF29058.1| outer membrane protein [Neisseria gonorrhoeae NCCP11945]
gi|226512177|gb|EEH61522.1| surface protein A [Neisseria gonorrhoeae 1291]
Length = 175
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
F + + + G+ Y V ++ L A YRY +
Sbjct: 116 GGSDSFSKTSAGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNT 158
>gi|307608993|emb|CBW98405.1| hypothetical protein LPW_02571 [Legionella pneumophila 130b]
Length = 238
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 29/211 (13%), Positives = 64/211 (30%), Gaps = 26/211 (12%)
Query: 55 SGNYVGLHISRLY---ETHPLADTINRKTYNSLLPN-----GLGIELGH---NIQLEDFV 103
SG Y+ + + A + ++L + G G LG+ +
Sbjct: 29 SGFYLQAMLDYNWFHYNHAYTASFFGPQNISALDASIDNQWGYGFGLGYRFNDYVRTAIT 88
Query: 104 FGINCHTTAAKDDSTFYRLKEKYF-IYGDVVLKAG---YSVDSLLIYGMGGFGGAYVIDS 159
A D + + +SV + Y M G G A+ +
Sbjct: 89 VQARPDVNFAVTDDAPETATGHFDNYTYMLNGYLSSPNFSVMNFNPYIMAGVGVAHNKTT 148
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI-------HS 212
++ + + + GIG Y ++ + + +Y +I ++
Sbjct: 149 NIYWPAA---AQTEFADKATKFAWQFGIGSLYALSDSLLIDINYNFISIGEVRNSGQYNA 205
Query: 213 VNNSNAKSDVERVDRK-GNAHIASLGINMHF 242
+ +N + ++ A +GI+ F
Sbjct: 206 IAANNTPASGAPTKFTNVYSNQAEIGIHYQF 236
>gi|297185481|gb|ADI24120.1| outer membrane protein W [Aeromonas hydrophila]
Length = 203
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 20/195 (10%), Positives = 60/195 (30%), Gaps = 24/195 (12%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-------FGIN----CH 109
H + + ++ +T + + +E+ N+QL + +G+
Sbjct: 20 AHQAGDFLVRGGLAFVSPQTSSDNVLGTGELEIDSNMQLGLTLSYLITDNWGVELLAATP 79
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + + + + + ++ + G + + Y G ++ +
Sbjct: 80 FSHSVSTAGLGEVAKVKHLPPTLMAQYYFGDANSKVRPYIGAGI-----NYTTFFDEQGR 134
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ + + +GLD +N ++AS I + + V ++
Sbjct: 135 GALDGTDVSVDSSWGMAGQVGLDMAINDRWFVNASAWIIDIDT------DVHTAVGTINT 188
Query: 228 KGNAHIASLGINMHF 242
+ G+ F
Sbjct: 189 SIDPMAFMFGVGYRF 203
>gi|256027237|ref|ZP_05441071.1| Outer membrane protein P1 precursor [Fusobacterium sp. D11]
gi|289765214|ref|ZP_06524592.1| outer membrane protein P1 [Fusobacterium sp. D11]
gi|289716769|gb|EFD80781.1| outer membrane protein P1 [Fusobacterium sp. D11]
Length = 483
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 51/196 (26%), Gaps = 34/196 (17%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFV----------------FGINCHTTAAKD 115
+ D + G G +LG N ++ + + G
Sbjct: 248 VKDGLVGDIDAKREAWGYGFQLGINYKVNNKLNLAARYDSRVKMNFKSKGSEHQLQTTDV 307
Query: 116 DSTFYRLKEKYF-IYGDVVLK--------AGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
L Y D ++ G S Y + G Y + S
Sbjct: 308 LGQTIGLTTFYPQYIIDSKVRRDLPAILSVGASYKITDNYLVSGTANYYFNRQARMDRVS 367
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
GR + + G +Y +N +L S Y + + ++ + + V
Sbjct: 368 AFGGLEHGR--DYKDGWEVAFGNEYKLNNKFTLIGSINYARTGAKNASFNDTEYALNSV- 424
Query: 227 RKGNAHIASLGINMHF 242
G+ +F
Sbjct: 425 ------TLGAGVRYNF 434
>gi|218460928|ref|ZP_03501019.1| putative outer membrane protein [Rhizobium etli Kim 5]
Length = 340
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 21/162 (12%), Positives = 48/162 (29%), Gaps = 7/162 (4%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
Y + + + + PN +G+ +G + F + I ++ +
Sbjct: 173 AFYAGISVDELEDGFYKSDEEPNNVGVAVGLGGKAGAFSYQITAGYDVDNEEGAVRAMGT 232
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV-------IDSSLEKVESDNSKNAKGRFD 177
G + L A Y+ Y + A V+ ++ G
Sbjct: 233 VDIGPGTLGLAAVYASGPSSYYTKAEWAIAAEYAIKATDKLKITPGVQYYSNYYVAGDDF 292
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ +G+ +DY + + AS +Y+ +
Sbjct: 293 SDDDAWKVGLTVDYQIVDNFYAKASVQYLDPENDDDATAGYF 334
>gi|170700762|ref|ZP_02891755.1| OmpW family protein [Burkholderia ambifaria IOP40-10]
gi|170134326|gb|EDT02661.1| OmpW family protein [Burkholderia ambifaria IOP40-10]
Length = 243
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 52/190 (27%), Gaps = 15/190 (7%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTFYRL 122
P+ +I + LG+ G+ + + V GI T F L
Sbjct: 54 GGTPINQSIPNTGAGINDADTLGLAAGYFVTDHISTELVMGIPPKFDITGKGRFENFGVL 113
Query: 123 KEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGRFDG 178
Y ++L+ + + Y G + + E+
Sbjct: 114 GRAYQWSPALLLRYHFNDANAKFRPYLGVGATYVWFTGAKITNSSFENGVLGGPTSATTS 173
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS------NAKSDVERVDRKGNAH 232
+ + VL G Y S YIP + + + ++ + N
Sbjct: 174 NQWAPVLNAGFTYNFTKHWFGGLSISYIPVSVTATFTTARRTPVGTLTETSKAKISLNPI 233
Query: 233 IASLGINMHF 242
+ L + F
Sbjct: 234 VTYLNVGYRF 243
>gi|311693205|gb|ADP96078.1| membrane protein involved in aromatic hydrocarbon degradation
[marine bacterium HP15]
Length = 445
Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 53/179 (29%), Gaps = 23/179 (12%)
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFG----------INCHTTAAKDDSTFYRLKEKYFI 128
T +S P G G + E++ G + ++
Sbjct: 275 STIDSFQPETFGF--GAQYKGENWRVGGSLEQQNWSELENEFSSDTIKDQQSVAPGSRIK 332
Query: 129 YGDVVL-KAG--YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
+ DV++ + G Y+++ GG S E + D + L
Sbjct: 333 FDDVLVPRIGAEYALNKNFS-VRGGVAYEESPLKSTRNPEINYL-----DTDKIVVGLGL 386
Query: 186 GIGLDY--MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ Y + L Y+Y + + V G+ H+ S I + F
Sbjct: 387 SATYDRTRLLAYPVRLDIGYQYQQLQERDFTLVDFDGNETPVTADGDVHVVSGSITLKF 445
>gi|288801898|ref|ZP_06407340.1| RNA polymerase ECF-type sigma factor [Prevotella melaninogenica
D18]
gi|288335940|gb|EFC74373.1| RNA polymerase ECF-type sigma factor [Prevotella melaninogenica
D18]
Length = 569
Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 42/121 (34%), Gaps = 15/121 (12%)
Query: 96 NIQLED-FVFGINCHTTAAKDD------STFYRLKEKYFIYG---DVVLKAGYSVDSLLI 145
N QL + FG T K D +K G + + S
Sbjct: 416 NKQLSSHWTFGTGLTYTRMKSDFESEFHGATLLKTQKIDYVGIPLRLTYRIW-SKGRFNA 474
Query: 146 YGMGGFGGAYVIDSSLEK---VESDNSKNAKGRFD-GHGSSVVLGIGLDYMVNYDISLSA 201
Y GG + SSL+K + SD+S KG + SV LG G+ Y + SL
Sbjct: 475 YTTGGVTFEMPVHSSLDKKYIITSDSSYTLKGDIKPRYQWSVNLGAGVQYKLFKPFSLYI 534
Query: 202 S 202
Sbjct: 535 E 535
>gi|256750558|gb|ACV21064.1| outer membrane protein W [Vibrio parahaemolyticus]
Length = 193
Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 29/107 (27%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G Y G D + D + +G+DYM+N
Sbjct: 91 FGEPQSKFRPYVGAGLNYTIFFDEGFNNKAKNVGLTDLKLDDS--FGLAANVGVDYMIND 148
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+AS Y + ++ D K N + + F
Sbjct: 149 QWFLNASAWYANIETEATYKFGG--AKQKTDVKINPWVFMISGGYKF 193
>gi|261210344|ref|ZP_05924639.1| outer membrane protein A precursor [Vibrio sp. RC341]
gi|260840571|gb|EEX67132.1| outer membrane protein A precursor [Vibrio sp. RC341]
Length = 293
Score = 35.2 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 18/113 (15%)
Query: 136 AGYSV------DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
GY D+ + G GF G Y + + V + + G G + LG+G+
Sbjct: 56 LGYDFMQYIPEDNDIHLGSMGFVGRYPLSKKWDLVGNAGVVKSFGEQSRSGFAGTLGVGV 115
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
DY + + IS Y R +R+G+ + A G+ F
Sbjct: 116 DYQLTHAISTRMGVNYY------------SGLPLRYEREGDLYQAYWGLTYRF 156
>gi|254415512|ref|ZP_05029272.1| hypothetical protein MC7420_4970 [Microcoleus chthonoplastes PCC
7420]
gi|196177693|gb|EDX72697.1| hypothetical protein MC7420_4970 [Microcoleus chthonoplastes PCC
7420]
Length = 593
Score = 35.2 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 21/187 (11%), Positives = 52/187 (27%), Gaps = 31/187 (16%)
Query: 57 NYVGLHISRLYETHPLA-----DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
Y +S + + + D + + G+N++ + +G
Sbjct: 401 FYTDTLVSYGWNDYEITRQIEFDNRRATADPDGNQLSVDVNGGYNVRAGNLSYGPTVGVR 460
Query: 112 AAKDDSTFYRLKE--------------KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ + Y + + V G++V + + +
Sbjct: 461 YDRVEIDHYTEEGAGSLNMAVQDQEAESLVLSAGVQAAYGFNVGNTTVTPNFRVRYEHQF 520
Query: 158 DSSLEKVESDNSKNAK-----GRFDGHGSSVVLGIGLDYMVNYDISLSASY-------RY 205
+ ++E++ D V LG G+D + + S + Y Y
Sbjct: 521 ANDSREIETELLTQPGIPIRATTDDPDRDYVRLGAGMDVQFSPNFSGAIDYETVVGREDY 580
Query: 206 IPHHIHS 212
H + +
Sbjct: 581 TDHGVRA 587
>gi|117619065|ref|YP_858387.1| outer membrane protein W [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560472|gb|ABK37420.1| outer membrane protein W [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|297185491|gb|ADI24125.1| outer membrane protein W [Aeromonas hydrophila]
gi|297515961|gb|ADI44329.1| outer membrane protein W [Aeromonas hydrophila]
Length = 203
Score = 35.2 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 31/107 (28%), Gaps = 11/107 (10%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G ++ + + + + +GLD +N
Sbjct: 108 FGDANSKVRPYIGAGI-----NYTTFFDEQGRGALDGTDVSVDSSWGMAGQVGLDMAIND 162
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++AS + + + V ++ + G+ F
Sbjct: 163 RWFVNASAWIMDIDT------DVHTAVGTINTSIDPMAFMFGVGYRF 203
>gi|91788571|ref|YP_549523.1| OmpA-like protein transmembrane region [Polaromonas sp. JS666]
gi|91697796|gb|ABE44625.1| OmpA-like transmembrane region [Polaromonas sp. JS666]
Length = 200
Score = 35.2 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 46/186 (24%), Gaps = 27/186 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + R + I + I G FG+ T +
Sbjct: 42 GYVGFNAGRSDLSLSNGTGIFPSDRHDT---AYNIYAGSYFSSN---FGLELGYTDFGNV 95
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
S + + +V K + + S +
Sbjct: 96 SRGGGNTKAKGVNLSLVGKF--------PLSNAFNLLGKLGTTYGRTSVSSAPGSGIASG 147
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
G V G+G +Y N + S Y H + + A D ++
Sbjct: 148 SESGFGVSYGVGAEYAFNPNWSAVLQYD-----EHKLKFAGAGRD--------RISATTV 194
Query: 237 GINMHF 242
G+ F
Sbjct: 195 GVRYRF 200
>gi|91786191|ref|YP_547143.1| OmpW [Polaromonas sp. JS666]
gi|91695416|gb|ABE42245.1| OmpW [Polaromonas sp. JS666]
Length = 227
Score = 35.2 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 11/112 (9%), Positives = 33/112 (29%), Gaps = 14/112 (12%)
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
++ + + ++ Y G +L D + L +G+D
Sbjct: 130 TLLGQYHFPMNGFKPYVGAGINYTRFSSVNLL---------PGVDIDRNSWGPALQVGVD 180
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ ++ Y + + + + K + + +G+ F
Sbjct: 181 IPLSGNM-----YLNFDVKKVYIRTDVSLNGRNVGEFKVDPLLVGVGLGWRF 227
>gi|329890182|ref|ZP_08268525.1| outer membrane protein W [Brevundimonas diminuta ATCC 11568]
gi|328845483|gb|EGF95047.1| outer membrane protein W [Brevundimonas diminuta ATCC 11568]
Length = 266
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 12/98 (12%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G S KN G V L G D+ ++ +L+ +
Sbjct: 181 PYVGAGVSYM--------AFFSGKDKNGFEVDLDDGFGVALQAGADWNLSGPWTLNLDAK 232
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + N A + + + S+G+ F
Sbjct: 233 KVWFDTDAKINGGAL----KSSVSLDPWVVSVGVGRKF 266
>gi|325137009|gb|EGC59606.1| opacity protein [Neisseria meningitidis M0579]
Length = 259
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 13/68 (19%)
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ + G+ + + ++L YRY + + H
Sbjct: 205 SHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLE-------------NTRFKTHEV 251
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 252 SLGMRYRF 259
>gi|326315012|ref|YP_004232684.1| OmpW family protein [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323371848|gb|ADX44117.1| OmpW family protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 248
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 30/103 (29%), Gaps = 9/103 (8%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ Y G V++S V + + KN VL G + ++ S
Sbjct: 154 GPVRPYIGAGINYTLVLESRDGFVSNLDVKNG--------VGPVLQAGFEVPIDQRWSFF 205
Query: 201 ASYRYIPHHIHSVNNSNAKSDVER-VDRKGNAHIASLGINMHF 242
+ I + + + + + G++ F
Sbjct: 206 VDAKKIWLKTTATGTLPVLGGAPAHAKVRLDPLVVTAGVSYRF 248
>gi|256807270|gb|ACV30000.1| 26 kDa hypothetical protein [Candidatus Rickettsia amblyommii]
Length = 242
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 9/95 (9%), Positives = 26/95 (27%), Gaps = 1/95 (1%)
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G +S + + + + L +G + V + Y +
Sbjct: 146 AGVGAAFVKEKINSKDIKDGVTDTFNGTTKNKTNFAYQLSLGTSFEVAPSVKAELVYSWR 205
Query: 207 PHHI-HSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ + + ++ V+ + H G+
Sbjct: 206 DYGKTKNTTKTIDRAKVKFGGTRYKGHNLMAGLRF 240
>gi|254492931|ref|ZP_05106102.1| LOW QUALITY PROTEIN: ferric siderophore receptor protein [Neisseria
gonorrhoeae 1291]
gi|226511971|gb|EEH61316.1| LOW QUALITY PROTEIN: ferric siderophore receptor protein [Neisseria
gonorrhoeae 1291]
Length = 711
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 19/76 (25%)
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ AG A A + ++ L G+++
Sbjct: 245 TRVHAGMDYQQAKETADAPLSYAVYDSQGYATAFGPKDNPATNWSNSRNRALNLFAGIEH 304
Query: 192 MVNYDISLSASYRYIP 207
N D L A Y Y
Sbjct: 305 RFNQDWKLKAEYDYTR 320
>gi|222032170|emb|CAP74909.1| structural protein [Escherichia coli LF82]
gi|312944951|gb|ADR25778.1| Putative flagellin structural protein; putative exported protein
[Escherichia coli O83:H1 str. NRG 857C]
Length = 982
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 17/155 (10%), Positives = 46/155 (29%), Gaps = 7/155 (4%)
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF-----GINCHTTAAKDDSTFYRLK 123
+ +++ + G G++ G++ +L D + ++ + D +K
Sbjct: 819 SATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSGLFQSGDDYQLSNNMK 878
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
Y + + G Y Y + + ++++ D
Sbjct: 879 VDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNHNDVNGDSIDNGTEGS 938
Query: 184 VL--GIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ G+G + + S Y+ + S
Sbjct: 939 AVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 973
>gi|149187252|ref|ZP_01865550.1| hypothetical protein VSAK1_17052 [Vibrio shilonii AK1]
gi|148838788|gb|EDL55727.1| hypothetical protein VSAK1_17052 [Vibrio shilonii AK1]
Length = 180
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 50/163 (30%), Gaps = 14/163 (8%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF-VFGINCHTTAAK 114
G YVG ++ + N + NG G++ L F V G
Sbjct: 24 GFYVGA------SYSKMSYNAAFVSSNEVT-NGYSANGGYDFALGSFFVLGTELEYKNLG 76
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ Y + G +V L G + A + + N
Sbjct: 77 STKESFL----SDYYTLSMTSYGINVIPKLYMGDRFYALAKLGFHKINSEVETNVSVNGS 132
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S V G+GL Y + ++ ASY +++ ++N
Sbjct: 133 SVSDTAS--VYGLGLGYDITEHFAIQASYEIHNIAVYNTRSAN 173
>gi|281355206|ref|ZP_06241700.1| hypothetical protein Vvad_PD3312 [Victivallis vadensis ATCC
BAA-548]
gi|281318086|gb|EFB02106.1| hypothetical protein Vvad_PD3312 [Victivallis vadensis ATCC
BAA-548]
Length = 1010
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 58/177 (32%), Gaps = 18/177 (10%)
Query: 20 PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD----- 74
P+H + + I++ A + E + +G Y G+ D
Sbjct: 435 PDHIGFANFPVSEYIEMMKIAYAETKKAAPEMSVLTGGYTGMP--GSSPKMREKDHMTRT 492
Query: 75 -TINRKTYNSLLPNGLGIELGHNIQLEDFV-----FGINCHTTAAKDDSTFYRLKEKYFI 128
T + +Y+ L +G G + Q++ V GI A + + L +
Sbjct: 493 LTEGKGSYDVLAFHGHGSMSSYRNQVDRLVKMRRDLGIEAPW-YANETAISAILIGEMKQ 551
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
+ K YS + G G+ + + + ++++ R ++ +
Sbjct: 552 AETLFQKFLYSWAN----GAIGYNWYDLRNDGFDPNANEHNFGLITRDFQPKAAYAV 604
>gi|268602761|ref|ZP_06136928.1| LOW QUALITY PROTEIN: ferric siderophore receptor protein [Neisseria
gonorrhoeae PID1]
gi|268586892|gb|EEZ51568.1| LOW QUALITY PROTEIN: ferric siderophore receptor protein [Neisseria
gonorrhoeae PID1]
Length = 721
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 19/76 (25%)
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ AG A A + ++ L G+++
Sbjct: 245 TRVHAGMDYQQAKETADAPLSYAVYDSQGYATAFGPKDNPATNWSNSRNRALNLFAGIEH 304
Query: 192 MVNYDISLSASYRYIP 207
N D L A Y Y
Sbjct: 305 RFNQDWKLKAEYDYTR 320
>gi|260170909|ref|ZP_05757321.1| hypothetical protein BacD2_03509 [Bacteroides sp. D2]
Length = 531
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 50/191 (26%), Gaps = 24/191 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + LY + + + + NG G+ + + +V G
Sbjct: 251 FYVGATLG-LYSVNYDRTSEYNEDFTDKDGNG---HGGYTLGNDFWVDGSGVDFK----- 301
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYG-----MGGFGGAYVIDSSLEKVESDNSKN 171
L + + G +V + + ++ D N
Sbjct: 302 -----LGFILRPFESSSFRIGAAVHTPTFFSLKERNTAYLAFDLNEETKDITRPYDARGN 356
Query: 172 AKGRFDGHG--SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ + + Y + ++L Y Y + + + + D K
Sbjct: 357 DTEGEYEYKLVTPWKFNASMGYTIGSSVALGVEYEYSDRTKAKMKDPDGYELGQTEDIKA 416
Query: 230 ---NAHIASLG 237
H +G
Sbjct: 417 MMKPVHTLRVG 427
>gi|315113187|pdb|2X27|X Chain X, Crystal Structure Of The Outer Membrane Protein Oprg From
Pseudomonas Aeruginosa
Length = 212
Score = 35.2 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 4/100 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
YG G D L ++ D + +G DYM+N + +
Sbjct: 113 PYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSW--GLAGELGFDYMLNEHALFNMAVW 170
Query: 205 YIPHHIHSVNNSNAKSDV--ERVDRKGNAHIASLGINMHF 242
Y+ + N + V +VD + + +G F
Sbjct: 171 YMDIDTKASINGPSALGVNKTKVDVDVDPWVYMIGFGYKF 210
>gi|15677813|ref|NP_274977.1| adhesion and penetration protein [Neisseria meningitidis MC58]
gi|7227246|gb|AAF42312.1| adhesion and penetration protein [Neisseria meningitidis MC58]
gi|316985623|gb|EFV64570.1| adhesion and penetration protein [Neisseria meningitidis H44/76]
gi|325139305|gb|EGC61846.1| adhesion and penetration protein [Neisseria meningitidis CU385]
gi|325143693|gb|EGC66012.1| adhesion and penetration protein [Neisseria meningitidis M01-240013]
gi|325201033|gb|ADY96488.1| adhesion and penetration protein [Neisseria meningitidis H44/76]
Length = 1457
Score = 35.2 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 37/129 (28%), Gaps = 8/129 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G+ + + L+D I K +L GI+ + FGI H A +
Sbjct: 1287 FYIGISAGAGFSSGSLSDGIGGKIRRRVLH--YGIQARYRAGFGG--FGIEPHIGATRYF 1342
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + G + + + S+ S + +A
Sbjct: 1343 VQKADYRYENVNIATP----GLAFNRYRAGIKADYSFKPAQHISITPYLSLSYTDAASGK 1398
Query: 177 DGHGSSVVL 185
+ +
Sbjct: 1399 VRTRVNTAV 1407
>gi|329999181|ref|ZP_08303373.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
gi|328538373|gb|EGF64503.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3]
Length = 1350
Score = 35.2 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 44/178 (24%), Gaps = 16/178 (8%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL-----GIELG-------HNIQLEDF 102
+G YVG Y +A + + ++ G ++ L F
Sbjct: 1164 AGFYVGG-GGYSYLGQNVASNTSINANAGVYLRPYHDEYRQLQAGLSMSYMDYSKNLSYF 1222
Query: 103 VFGINCHTT---AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+G + + ++ + GY S +
Sbjct: 1223 TYGQGGYFSPQNYVSVSLPVSLTEKYDNWTMKLGGSVGYQSYSQDKSAYFPTNSEWQQTL 1282
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ G L G DY VN ++L Y ++ + +
Sbjct: 1283 ETAVSNGFAKEAYYSATSKSGIGYTLRAGADYKVNKQMTLGGQIGYDTFGDYNESTAG 1340
>gi|229591890|ref|YP_002874009.1| putative fatty acid transporter membrane protein [Pseudomonas
fluorescens SBW25]
gi|229363756|emb|CAY51170.1| putative fatty acid transport system, membrane protein [Pseudomonas
fluorescens SBW25]
Length = 431
Score = 35.2 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 3/106 (2%)
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG---HGSSVVLGIGLDYMVNYD 196
Y +G + D S G + +GL Y V +
Sbjct: 326 WHDTWAYAVGTSYQLTKQVVLRTGLTFDQSPTNNTDRSPRIPTGDRTIFSVGLGYAVMDN 385
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ +Y Y+ V +NA + +A+ LG+ F
Sbjct: 386 MTVDLAYSYLKEEDVKVQRTNALRQTYNAKYENSANGFGLGLTYKF 431
>gi|289207704|ref|YP_003459770.1| hypothetical protein TK90_0519 [Thioalkalivibrio sp. K90mix]
gi|288943335|gb|ADC71034.1| hypothetical protein TK90_0519 [Thioalkalivibrio sp. K90mix]
Length = 183
Score = 35.2 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 44/172 (25%), Gaps = 33/172 (19%)
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGI---NCHTT-AAKDDSTFYRLKEKYFIYG 130
+++ + G GIELG N QL G+ + ++ +
Sbjct: 41 SVSPDASGTSTDWGYGIELGANCQLLQPRTGVLRHQLSVSRYSESPLRMTSTELNTHWMF 100
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ L Y G + G L
Sbjct: 101 ETAPNLELGFGPGLGYVRA----------------------ELGDDTNGLWAAQFGGSLK 138
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y ++ ++ L RY + + DV+ + + +HF
Sbjct: 139 YTMDNNMFLGVEARYQFTESDRFRSGRGREDVDNLR-------VMAKLGVHF 183
>gi|224370994|ref|YP_002605158.1| FadL [Desulfobacterium autotrophicum HRM2]
gi|223693711|gb|ACN16994.1| FadL [Desulfobacterium autotrophicum HRM2]
Length = 433
Score = 35.2 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 56/186 (30%), Gaps = 32/186 (17%)
Query: 80 TYNSLLPNGLGIELGHNIQL-----EDFVFG----------INCHTTAAKDDSTFYRLKE 124
+ + +G G +G+N+ L + FG I+ +
Sbjct: 200 SDGNQKFSGDGNGVGYNLGLAVAFTDKLTFGASYRSKVTVDIDGDVVFSDIPDALASTGI 259
Query: 125 KYFIYGDV--------VLKAGYSVDSLLIYGMG--GFGGAYVIDSSLEKVESDNSKNAKG 174
G+ Y+ L +G G + +E ++ ++ ++
Sbjct: 260 LPDTNGNADMTLPAQFTAGVAYAFTDQLTVEVGMRWEGWSCFDSLEIEMDQAVLNQTSQT 319
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ IG +Y + ++LSA Y Y N+ E + H+
Sbjct: 320 IEKKWHDTWTYNIGAEYQLTKQLALSAGYLY-------QENAVPDDTFEPSTPDSDCHLF 372
Query: 235 SLGINM 240
LG +
Sbjct: 373 CLGGSY 378
>gi|221640684|ref|YP_002526946.1| hypothetical protein RSKD131_2585 [Rhodobacter sphaeroides KD131]
gi|221161465|gb|ACM02445.1| Hypothetical Protein RSKD131_2585 [Rhodobacter sphaeroides KD131]
Length = 722
Score = 35.2 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 32/106 (30%), Gaps = 6/106 (5%)
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
S Y K + + + AG L YG G G + +
Sbjct: 137 DFVGTGIQSAEYVAATK-HLTPRLKVTAGVGWGRLGSYGSFG--GVGTRPEFVPQESEGG 193
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
NA F G + G+++ ++L A Y + + +
Sbjct: 194 EVNADQWFRGDMAGF---AGIEWQPTDRLTLKAEYSSDDYEEETED 236
>gi|209886342|ref|YP_002290199.1| outer membrane protein [Oligotropha carboxidovorans OM5]
gi|209874538|gb|ACI94334.1| outer membrane protein [Oligotropha carboxidovorans OM5]
Length = 103
Score = 35.2 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 18/67 (26%), Gaps = 6/67 (8%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYE------THPLADTINRKTYNSLLPNGLGIELG 94
W+G Y G+ T L + +G +LG
Sbjct: 25 AVKAPVYRAPIDSWTGAYAGIIGGYATGPSHSEPTGILLLAGAYPIDLTTKGGFVGGQLG 84
Query: 95 HNIQLED 101
+N Q +
Sbjct: 85 YNYQFAN 91
>gi|85860636|ref|YP_462838.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
gi|85723727|gb|ABC78670.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
SB]
Length = 537
Score = 35.2 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 16/128 (12%), Positives = 40/128 (31%), Gaps = 11/128 (8%)
Query: 100 EDFVFGINCHTTAAKDDSTFYRLKEKYFIYG-DVVLKAGYSVDSLLIYGMGGFGGAYVID 158
++F + A + + + V L GY+ ++ G+ +
Sbjct: 272 GPWLF----NAQYAFASNINQKHSHSHNSMANSVSLSPGYNFGRFVVSLTAGYTNVLLR- 326
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD--ISLSASYRYIPHHIHSVNNS 216
+ + N+ + + G + ++VN + + + A Y + V+N
Sbjct: 327 ---TDPDPNPQANSDPGYKHYLDYFTAGPAVRFLVNSNHILEVFAGYDKKDYFNQKVDND 383
Query: 217 NAKSDVER 224
D
Sbjct: 384 EGIRDAVG 391
>gi|189501037|ref|YP_001960507.1| surface antigen msp4 family protein [Chlorobium phaeobacteroides
BS1]
gi|189496478|gb|ACE05026.1| surface antigen msp4 family protein [Chlorobium phaeobacteroides
BS1]
Length = 203
Score = 35.2 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
++ + + + + D + LG G+ + V+ D ++ YRY S+
Sbjct: 127 TAGAGIANVSFNDGITSDDDTVFAYQLGAGIGFEVSEDTTVDVGYRY-------FATSDV 179
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
VD +H A +G+ F
Sbjct: 180 DPGGYGVDYSMASHNAVVGVRFAF 203
>gi|317164022|gb|ADV07563.1| outer membrane protein [Neisseria gonorrhoeae TCDC-NG08107]
Length = 227
Score = 35.2 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 18/54 (33%)
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ ++N + + G+ + + +++L A YRY
Sbjct: 156 NGAVTTYNTDPKTQNDYQSNSIRRVGLGVIAGIGFDITPNLTLDAGYRYHNWGR 209
>gi|283784575|ref|YP_003364440.1| outer membrane protein X [Citrobacter rodentium ICC168]
gi|282948029|emb|CBG87593.1| outer membrane protein X [Citrobacter rodentium ICC168]
Length = 171
Score = 35.2 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 43/142 (30%), Gaps = 11/142 (7%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
S T ++ + + G L + + ++ G+ T + D T
Sbjct: 19 GSATAATSTVSGGYAQSDAQGVANKMNGFNLKYRYEQDNNPLGVIGSFTYTEKDRTNGAG 78
Query: 123 K-EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
K YG A D IYG+ G G ++ + D
Sbjct: 79 DYNKSQYYGLTAGPAFRLNDWASIYGVVGVGYGKFQQTNY----------PGYKDDTSDY 128
Query: 182 SVVLGIGLDYMVNYDISLSASY 203
G GL + +++L SY
Sbjct: 129 GFSYGAGLQFNPIENVALDFSY 150
>gi|238759354|ref|ZP_04620519.1| Outer membrane autotransporter barrel domain [Yersinia aldovae ATCC
35236]
gi|238702381|gb|EEP94933.1| Outer membrane autotransporter barrel domain [Yersinia aldovae ATCC
35236]
Length = 1015
Score = 35.2 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 46/163 (28%), Gaps = 9/163 (5%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD---DSTFY 120
+ ++ + + G + N Q ++V+G++ +
Sbjct: 740 GGSFWQQRQGGSVGYDARSYGMVFGAEKQ---NEQDRNWVYGLHGAVSGQSVTVKSPETA 796
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
K F G + + G + G G + + G
Sbjct: 797 NGKTTAFNLG-IQARYGVERPEGMYLFGNGRFGIEDSWLDRSIHVETYGASHHASWTGLT 855
Query: 181 SSVVLGIGLDYMVNYDISLS--ASYRYIPHHIHSVNNSNAKSD 221
S++ G G + +N + S AS Y H V S +
Sbjct: 856 GSLMAGGGYRWALNDNASAGPVASLNYTTLHRPGVTESGNEGS 898
>gi|150009634|ref|YP_001304377.1| hypothetical protein BDI_3048 [Parabacteroides distasonis ATCC
8503]
gi|149938058|gb|ABR44755.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 317
Score = 35.2 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 22/183 (12%), Positives = 52/183 (28%), Gaps = 19/183 (10%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
+I + T + NGL ++G++ + FG + K +
Sbjct: 153 ANIGYAFVTSKFYLPPGGSGHPK---NGLDWQVGYDW-ISRSGFGAGLLYSGYKSSYIYS 208
Query: 121 RLKEKYF-IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ Y ++ ++ G G +S+ E
Sbjct: 209 GIDINVGLTYVAPQFVMKQIINRWIVEEKIGIGYFSYRESARGISE-----------SLS 257
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G +G +Y+++ + + + Y+ + N + + G+
Sbjct: 258 GVGYNFSLGAEYLLSKHVGVGLNIGYVGGSLPKQENVSYDKGDYSGLFRLTFD---AGVR 314
Query: 240 MHF 242
HF
Sbjct: 315 FHF 317
>gi|325270339|ref|ZP_08136944.1| hypothetical protein HMPREF9141_2154 [Prevotella multiformis DSM
16608]
gi|324987283|gb|EGC19261.1| hypothetical protein HMPREF9141_2154 [Prevotella multiformis DSM
16608]
Length = 438
Score = 35.2 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 44/178 (24%), Gaps = 18/178 (10%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
+ R + P G G F G + S F
Sbjct: 174 GGTDSGLPAVRQPGKRPSEGEKNPAGAG-----------FRTGGGAYVRDGMRPSRFSIG 222
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
G G + + YG G + V + + + H
Sbjct: 223 TSYSGTAGTSTDGGGMMLATADPYGSYGPEFSGVNVRNQTIRADETRTH-----TKHRQP 277
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
V G+ Y ++ SL A Y H N N V++ + +G +
Sbjct: 278 VKFGLSAKYALSDRWSLLAGVSYSRHSSEFTYNRNG--SSHTVEQHLHYVGLPVGASY 333
>gi|239998418|ref|ZP_04718342.1| outer membrane protein [Neisseria gonorrhoeae 35/02]
gi|240013543|ref|ZP_04720456.1| outer membrane protein [Neisseria gonorrhoeae DGI18]
gi|240112335|ref|ZP_04726825.1| outer membrane protein [Neisseria gonorrhoeae MS11]
gi|240117360|ref|ZP_04731422.1| outer membrane protein [Neisseria gonorrhoeae PID1]
gi|240120615|ref|ZP_04733577.1| outer membrane protein [Neisseria gonorrhoeae PID24-1]
gi|240125168|ref|ZP_04738054.1| outer membrane protein [Neisseria gonorrhoeae SK-92-679]
gi|260441108|ref|ZP_05794924.1| outer membrane protein [Neisseria gonorrhoeae DGI2]
gi|268594280|ref|ZP_06128447.1| outer membrane protein [Neisseria gonorrhoeae 35/02]
gi|268598395|ref|ZP_06132562.1| surface protein A [Neisseria gonorrhoeae MS11]
gi|268603056|ref|ZP_06137223.1| surface protein A [Neisseria gonorrhoeae PID1]
gi|268683763|ref|ZP_06150625.1| surface protein A [Neisseria gonorrhoeae SK-92-679]
gi|291044439|ref|ZP_06570148.1| outer membrane protein [Neisseria gonorrhoeae DGI2]
gi|268547669|gb|EEZ43087.1| outer membrane protein [Neisseria gonorrhoeae 35/02]
gi|268582526|gb|EEZ47202.1| surface protein A [Neisseria gonorrhoeae MS11]
gi|268587187|gb|EEZ51863.1| surface protein A [Neisseria gonorrhoeae PID1]
gi|268624047|gb|EEZ56447.1| surface protein A [Neisseria gonorrhoeae SK-92-679]
gi|291011333|gb|EFE03329.1| outer membrane protein [Neisseria gonorrhoeae DGI2]
gi|317163703|gb|ADV07244.1| outer membrane protein [Neisseria gonorrhoeae TCDC-NG08107]
Length = 175
Score = 35.2 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
F + + + G+ Y V ++ L A YRY + N N +S +
Sbjct: 116 GGSDSFSKTSAGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVN-NVKNVRSGELSAGVRVK 174
Query: 231 A 231
Sbjct: 175 F 175
>gi|237731729|ref|ZP_04562210.1| outer membrane protein W [Citrobacter sp. 30_2]
gi|226907268|gb|EEH93186.1| outer membrane protein W [Citrobacter sp. 30_2]
Length = 238
Score = 35.2 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S L Y G D + + D +G+DY++N
Sbjct: 136 FGDSSSKLRPYVGVGVNYTTFFDEGFNDNGKETGLSDLSLKDSW--GAAGQVGMDYLINR 193
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D ++ S Y+ + + V + S G F
Sbjct: 194 DWLINMSVWYMDIDTTASYKMGGVQQRDSVRLDPWVFMFSAG--YRF 238
>gi|218708861|ref|YP_002416482.1| long-chain fatty acid transport protein [Vibrio splendidus LGP32]
gi|218321880|emb|CAV17865.1| Long-chain fatty acid transport protein precursor [Vibrio
splendidus LGP32]
Length = 417
Score = 35.2 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 23/96 (23%), Gaps = 8/96 (8%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y + G + + K A + IG Y +N +L Y Y
Sbjct: 281 YSVQWIGWGDFDQIEFQNLSQGAIKGAYNKEYKWQDGWHYAIGGTYYLNDTWTLRTGYMY 340
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ S + S G H
Sbjct: 341 --------DTSAQDELTSISVPDSDRQWFSAGFTYH 368
>gi|215486491|ref|YP_002328922.1| outer membrane protein W [Escherichia coli O127:H6 str. E2348/69]
gi|312966503|ref|ZP_07780725.1| outer membrane protein W [Escherichia coli 2362-75]
gi|215264563|emb|CAS08931.1| outer membrane protein W [Escherichia coli O127:H6 str. E2348/69]
gi|312288956|gb|EFR16854.1| outer membrane protein W [Escherichia coli 2362-75]
Length = 212
Score = 35.2 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S Y G ++ + D V +GLDY++N
Sbjct: 110 FGDSGSKFRPYIGAGINYTTFFNNDFNDTGEGLGLSDLSLKDSW--GVAGQVGLDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D L+ S Y+ + S + + V + S G F
Sbjct: 168 DWLLNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAG--YRF 212
>gi|153803270|ref|ZP_01957856.1| hypothetical protein A51_C0300 [Vibrio cholerae MZO-3]
gi|153803809|ref|ZP_01958395.1| hypothetical protein A51_A0164 [Vibrio cholerae MZO-3]
gi|124120656|gb|EAY39399.1| hypothetical protein A51_A0164 [Vibrio cholerae MZO-3]
gi|124121210|gb|EAY39953.1| hypothetical protein A51_C0300 [Vibrio cholerae MZO-3]
Length = 199
Score = 35.2 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 52/172 (30%), Gaps = 13/172 (7%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAKD 115
Y+GL +S + I+ + + +G G+ G+ V +
Sbjct: 33 FYIGLGLSFANTIMLESGGISLEENSDFGKSGFGLSAGYEFTTHKQVSIDVEAEYRQLGK 92
Query: 116 DSTFYRLKEKY-FIYGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ L ++ +V K Y + + GG G V S ++
Sbjct: 93 VNYSNILDVSGSGVFVNVKPKLFVNYEFGDVYLAPFGGVGLVKVDAKSPINNIAE----- 147
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
LGI L + VN + + YR + SV S +
Sbjct: 148 ----SETELGYQLGIELGFKVNRSMDIMIGYRSAQVEVDSVTTSFGNGYLGG 195
>gi|6977941|emb|CAB43832.2| App protein [Neisseria meningitidis serogroup B]
Length = 1457
Score = 35.2 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 37/129 (28%), Gaps = 8/129 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G+ + + L+D I K +L GI+ + FGI H A +
Sbjct: 1287 FYIGISAGAGFSSGSLSDGIGGKIRRRVLH--YGIQARYRAGFGG--FGIEPHIGATRYF 1342
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + G + + + S+ S + +A
Sbjct: 1343 VQKADYRYENVNIATP----GLAFNRYRAGIKADYSFKPAQHISITPYLSLSYTDAASGK 1398
Query: 177 DGHGSSVVL 185
+ +
Sbjct: 1399 VRTRVNTAV 1407
>gi|294338631|emb|CAZ86960.1| conserved hypothetical protein; putative exported protein
[Thiomonas sp. 3As]
Length = 473
Score = 35.2 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 49/201 (24%), Gaps = 27/201 (13%)
Query: 20 PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRK 79
PN ++A D P + A G W G Y + +T
Sbjct: 284 PNSNVAADGTTPLFATGTSTAQMFEVDGYLTQGDW-GYY--GQLGYGQQTG--------A 332
Query: 80 TYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS 139
YN G G + S L GY
Sbjct: 333 AYNGGKAKWWGASGMLTYNFTPRFLGF-ARADYLNNSSNGGGLPG------------GYM 379
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+ G G V V + + L +G +Y++ +L
Sbjct: 380 NPTA---GGPGASFNGVNGFGPGYVNDGTGNWTIVDPNKGANRYALSLGWNYLLTESTTL 436
Query: 200 SASYRYIPHHIHSVNNSNAKS 220
YRY + + N + S
Sbjct: 437 KMEYRYDRSSLATFYNVSDGS 457
>gi|207722098|ref|YP_002252536.1| outer membrane protein w [Ralstonia solanacearum MolK2]
gi|206587272|emb|CAQ17856.1| outer membrane protein w [Ralstonia solanacearum MolK2]
Length = 241
Score = 35.2 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 38/144 (26%), Gaps = 11/144 (7%)
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVE-- 165
+ + ++ V+ K G + Y G + D +
Sbjct: 98 IEGTDSFARYGQIGSAKQWSPTVLAKWFFGGADSKFRPYVGAGLNYTWFTDEKITNSTFQ 157
Query: 166 ----SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS---VNNSNA 218
+ + VL +G Y + D + S Y+P + +N
Sbjct: 158 TQVLGGGFPSTSTVSTDSSLNPVLSVGATYAITKDWFVGLSVSYLPLKTTAKIDTTLANG 217
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ V N + L + F
Sbjct: 218 QHSVTEAKITINPIVTFLSVGYRF 241
>gi|152972399|ref|YP_001337545.1| putative cellulose synthase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|150957248|gb|ABR79278.1| putative cellulose synthase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
Length = 1342
Score = 35.2 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 44/178 (24%), Gaps = 16/178 (8%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL-----GIELG-------HNIQLEDF 102
+G YVG Y +A + + ++ G ++ L F
Sbjct: 1156 AGFYVGG-GGYSYLGQNVASNTSINANAGVYLRPYHDEYRQLQAGLSMSYMDYSKNLSYF 1214
Query: 103 VFGINCHTT---AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+G + + ++ + GY S +
Sbjct: 1215 TYGQGGYFSPQNYVSVSLPVSLTEKYDNWTMKLGGSVGYQSYSQDKSAYFPTNSEWQQTL 1274
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ G L G DY VN ++L Y ++ + +
Sbjct: 1275 ETAVSNGFAKEAYYSATSKSGIGYTLRAGADYKVNKQMTLGGQIGYDTFGDYNESTAG 1332
>gi|316936693|gb|ADU60341.1| outer surface protein [Wolbachia pipientis]
Length = 192
Score = 35.2 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 47/179 (26%), Gaps = 17/179 (9%)
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY 129
+ K + + + +++D + + D+T
Sbjct: 25 TKIDGVAGLKKKDLYNASFIAGGGAFGYKMDDIRIDVEGIYSWLNKDTTSVPTGGVVNNL 84
Query: 130 GDVVLKAGYSVD------SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
+ D + Y G G AYV S+ G +
Sbjct: 85 TAISGLVNVYYDVAIEDMPITPYVGVGVGAAYV---------SNPLATKVVDKASFGVAY 135
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y V +I L A RY + N D + + A G+ +F
Sbjct: 136 QAKAGVSYDVTPEIKLYAGARY--FGSYGANFGKETKDDAGIKVLYSTVGAEAGVAFNF 192
>gi|317479209|ref|ZP_07938345.1| major outer membrane protein OmpA [Bacteroides sp. 4_1_36]
gi|316904653|gb|EFV26471.1| major outer membrane protein OmpA [Bacteroides sp. 4_1_36]
Length = 291
Score = 35.2 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 42/150 (28%), Gaps = 9/150 (6%)
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFG 152
G Q + + + + T++ + L AG + + +YG G
Sbjct: 73 GVRAQFNGVTQHLCLDNSYWEHNKTYFGGNIDA-MINLSTLFAGVNPNRFFEVYGFLGPQ 131
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+++ G+GL + +N ++ R
Sbjct: 132 VTVAKSANVLIQNDGTMIPDGDEKARARVGASAGLGLKFNINTKWTIDVEAR-------G 184
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ + + + G++ F
Sbjct: 185 AIAPSIFGNISSHRKAEGTGMLTAGVSYIF 214
>gi|301164136|emb|CBW23692.1| putative exported protein [Bacteroides fragilis 638R]
Length = 401
Score = 35.2 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 15/101 (14%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV------VLGIGLDYMVNYDISL 199
Y + G Y D + + S +S + D S V +G GL Y + +L
Sbjct: 221 YLVAGAVYGYSQDLAQDNTLSVSSTSGNESIDESQSHVRQCLPQFVGAGLAYN-SPRWTL 279
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+A Y+Y + SN + + N H S G
Sbjct: 280 TAEYKYTDWSRMKSSQSNVRFE--------NQHRLSAGTAY 312
>gi|268678777|ref|YP_003303208.1| aromatic hydrocarbon degradation membrane protein [Sulfurospirillum
deleyianum DSM 6946]
gi|268616808|gb|ACZ11173.1| membrane protein involved in aromatic hydrocarbon degradation
[Sulfurospirillum deleyianum DSM 6946]
Length = 405
Score = 35.2 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 3/132 (2%)
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ D F + G LK ++ I + A + + ++
Sbjct: 277 SYKDLDFDFENSAVEATPLGQSKLKNWKDANAYRIGISHQYSDALKLMAGFAIDKTPVPS 336
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ G + + G +Y ++ ++ + +Y Y SV NS +
Sbjct: 337 STMGFELPDSDAKIYSAGFEYALSKEMKMGLAYLYSDKEDRSVTNSAGVNGKFS---DSA 393
Query: 231 AHIASLGINMHF 242
AH+ + + F
Sbjct: 394 AHLVTASLKYKF 405
>gi|197337546|ref|YP_002157590.1| hypothetical protein VFMJ11_A0033 [Vibrio fischeri MJ11]
gi|197314798|gb|ACH64247.1| conserved hypothetical protein [Vibrio fischeri MJ11]
Length = 180
Score = 35.2 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 44/159 (27%), Gaps = 25/159 (15%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G I Y L + +G+ +E G++I + +FGIN
Sbjct: 33 GHRIGGGYSNTELVFDNRGADW----GDGIKLEYGYDI---NQIFGINASYQNNNGSKYG 85
Query: 120 YRLKEKYFIYGDVVLKAGYSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
L GY+ S+ YG G S +S + G
Sbjct: 86 VDLDGSTLKIDS---DIGYTFKFEEWSVKPYGAVGLARVNEKLSYDGISDSFKEISLMG- 141
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
G+G+ +N + Y + +
Sbjct: 142 ----------GMGVRANLNMGLYTDLRYDFFNIDNQDQD 170
>gi|218680157|ref|ZP_03528054.1| porin [Rhizobium etli CIAT 894]
Length = 347
Score = 35.2 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 49/163 (30%), Gaps = 8/163 (4%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
Y + + + Y+ N +G+ +G + F + I ++ +
Sbjct: 179 AFYAGISVDELEDSPFYDGETANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGT 238
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE--------SDNSKNAKGRF 176
G + L Y+ + Y + A DN G F
Sbjct: 239 VAVGPGTLGLAVVYASNPNAYYNKAEWAIAAEYAIKATDKLKITPGVQYYDNYGVTSGEF 298
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ ++ G+ +DY + +++ S +Y+ S
Sbjct: 299 NDDVNAWKAGVTIDYQIVDNLAAKVSVQYLDPDNAKDVTSGYF 341
>gi|153801595|ref|ZP_01956181.1| hypothetical protein A51_C0184 [Vibrio cholerae MZO-3]
gi|124122851|gb|EAY41594.1| hypothetical protein A51_C0184 [Vibrio cholerae MZO-3]
Length = 182
Score = 35.2 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 24/191 (12%), Positives = 60/191 (31%), Gaps = 35/191 (18%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA-------- 112
+ + L+ +R S + G+N Q F+ G++ +
Sbjct: 18 AYAGNSPYSFSLSTGFSRIDNPSSSDEAWVTQFGYNYQFSPFI-GLDLGYSGMIGNGAEM 76
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+K + F +G + +++ ++Y GG V + DN +
Sbjct: 77 LNTQKQKIDVKVEGFYFGAFFEQ---PINNLTILYARGGLSQFKVKERYELGAIGDNRQ- 132
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
F G + +G + ++ ++L+ Y +++ ++
Sbjct: 133 ----FSGTNPYIGIGTKVQSSIDKSLALTMELSYY-----------------PLEQDYSS 171
Query: 232 HIASLGINMHF 242
++G F
Sbjct: 172 LSFTVGGQYRF 182
>gi|324113132|gb|EGC07107.1| OmpW family protein [Escherichia fergusonii B253]
Length = 217
Score = 35.2 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 31/110 (28%), Gaps = 5/110 (4%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G S Y G ++ + D V +G+DY++N
Sbjct: 110 FGDSGSKFRPYIGAGINYTTFFNNDFNDTGEGLGLSDLSLKDSW--GVAGQVGVDYLINR 167
Query: 196 DISLSASYRYIPHHIHSVNNSNA---KSDVERVDRKGNAHIASLGINMHF 242
D L+ S Y+ SN + + + + + F
Sbjct: 168 DWLLNMSVWYMDIDTDVKYKSNGAVLPAGRYSDNVRLDPWVFMFSAGYRF 217
>gi|288925340|ref|ZP_06419274.1| RNA polymerase ECF-type sigma factor [Prevotella buccae D17]
gi|288337811|gb|EFC76163.1| RNA polymerase ECF-type sigma factor [Prevotella buccae D17]
Length = 523
Score = 35.2 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 61/180 (33%), Gaps = 23/180 (12%)
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD------STFYRLKEK 125
D + + + P G L N QL ++FG + T K D + +K
Sbjct: 349 DDHVLGEKAHHHRPVTFGFSL--NKQLSPHWIFGTGLNYTGLKSDFTSEFNGATLKKTQK 406
Query: 126 YFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG---- 178
G + L+ Y + Y GG + SS +K ++
Sbjct: 407 ISYIG-IPLRLTYRIWGKGRFNAYATGGVIFELPVHSSFKKKYIVTPDSSYTLQRDIHPR 465
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ SV LG+G+ Y + SL Y+ ++ N+ + + R + G+
Sbjct: 466 NQWSVNLGVGVQYRLFKPFSL-----YLEPNMFYYFNNGSDLETYRTEHPFTF-TVPFGL 519
>gi|240081377|ref|ZP_04725920.1| outer membrane protein [Neisseria gonorrhoeae FA19]
Length = 49
Score = 34.8 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 13/61 (21%)
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ + G+ + + ++L A YRY + + H ASLG+
Sbjct: 2 GLGVIAGVGFDITPKLTLDAGYRYHNWGRLE-------------NTRFKTHEASLGVRYR 48
Query: 242 F 242
F
Sbjct: 49 F 49
>gi|224458593|gb|ACN43175.1| major outer membrane protein OmpAI [Aeromonas veronii]
Length = 327
Score = 34.8 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 51/173 (29%), Gaps = 27/173 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-D 115
Y G + + D + T L + G+N + + A
Sbjct: 27 WYTG--VGAGWAYAHGLDDFGKDTDKD--ATALSLFGGYNF---NDYYAAELGYLYAGKA 79
Query: 116 DSTFYRLKEKYFIY-GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
K + G L G D ++ GG +V +
Sbjct: 80 GVDGADFKTQGATLSGIARLPLG---DIFSVFAEGGAYFNHVNGN--------------- 121
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+G++ + G+GL ++ I + A YRY+ + + V ++
Sbjct: 122 GNSDNGTAPLAGLGLTAKLSDLIDVQARYRYLWNLGDEQKTWESDMSVATLEL 174
>gi|77464768|ref|YP_354272.1| hypothetical protein RSP_1187 [Rhodobacter sphaeroides 2.4.1]
gi|77389186|gb|ABA80371.1| hypothetical protein RSP_1187 [Rhodobacter sphaeroides 2.4.1]
Length = 722
Score = 34.8 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 32/106 (30%), Gaps = 6/106 (5%)
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
S Y K + + + AG L YG G G + +
Sbjct: 137 DFVGTGIQSAEYVAATK-HLTPRLKVTAGVGWGRLGSYGSFG--GVGTRPEFVPQESEGG 193
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
NA F G + G+++ ++L A Y + + +
Sbjct: 194 EVNADQWFRGDMAGF---AGIEWQPTDRLTLKAEYSSDDYEEEAED 236
>gi|66866369|gb|AAY57834.1| outer membrane protein J [Moraxella catarrhalis]
Length = 192
Score = 34.8 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 11/138 (7%)
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY--------GDVVLKAGY 138
GI G+N FG + + + GDV Y
Sbjct: 53 TAYGIYAGYNFDQN---FGAEVEFVGSDAKEFDVTVPAVVGVSPAVVLPVKGDVKSFGAY 109
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
+ + + + + A +S+ G+G+ + ++
Sbjct: 110 GTYRYNFINTPFYAKGKLGIAKTKVDVTGRKATASYSNKSDETSLAGGVGVGFKPLANVG 169
Query: 199 LSASYRYIPHHIHSVNNS 216
+ ASY Y+ ++++
Sbjct: 170 VEASYNYLSEDANAISLG 187
>gi|325133444|gb|EGC56108.1| adhesion and penetration protein [Neisseria meningitidis M13399]
Length = 1447
Score = 34.8 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 37/129 (28%), Gaps = 8/129 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G+ + + L+D I K +L GI+ + FGI H A +
Sbjct: 1277 FYIGISAGAGFSSGSLSDGIGGKIRRRVLH--YGIQARYRAGFGG--FGIEPHIGATRYF 1332
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + G + + + S+ S + +A
Sbjct: 1333 VQKADYRYENVNIATP----GLAFNRYRAGIKADYSFKPAQHISITPYLSLSYTDAASGK 1388
Query: 177 DGHGSSVVL 185
+ +
Sbjct: 1389 VRTRVNTAV 1397
>gi|325129414|gb|EGC52246.1| adhesion and penetration protein [Neisseria meningitidis OX99.30304]
Length = 1463
Score = 34.8 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 37/129 (28%), Gaps = 8/129 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G+ + + L+D I K +L GI+ + FGI H A +
Sbjct: 1293 FYIGISAGAGFSSGSLSDGIGGKIRRRVLH--YGIQARYRAGFGG--FGIEPHIGATRYF 1348
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + G + + + S+ S + +A
Sbjct: 1349 VQKADYRYENVNIATP----GLAFNRYRAGIKADYSFKPAQHISITPYLSLSYTDAASGK 1404
Query: 177 DGHGSSVVL 185
+ +
Sbjct: 1405 VRTRVNTAV 1413
>gi|294645727|ref|ZP_06723413.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294808350|ref|ZP_06767105.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
gi|292638933|gb|EFF57265.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294444426|gb|EFG13138.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
Length = 531
Score = 34.8 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 52/191 (27%), Gaps = 24/191 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + LY + + + + NG G+ + + +V G
Sbjct: 251 FYVGATLG-LYSVNYDRTSEYNEDFTDKDGNG---HGGYTLGNDFWVDGSGVDFK----- 301
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
L + + G +V + + + AY+ E
Sbjct: 302 -----LGFILRPFESSSFRIGAAVHTPTFFSLKERNTAYINFDLNETTRGITKPYDARGN 356
Query: 177 DGHG-------SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
D G + + Y + ++L Y Y + + + + D K
Sbjct: 357 DTEGEYEYKLITPWKFNASMGYTIGSSVALGVEYEYSDRTSAKMKDPDGYELGQTEDIKA 416
Query: 230 ---NAHIASLG 237
H +G
Sbjct: 417 MMKAVHTLRVG 427
>gi|281423558|ref|ZP_06254471.1| putative peptidoglycan-associated lipoprotein [Prevotella oris
F0302]
gi|281402378|gb|EFB33209.1| putative peptidoglycan-associated lipoprotein [Prevotella oris
F0302]
Length = 425
Score = 34.8 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 7/81 (8%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVGL + + ++ G G+ + VF I +
Sbjct: 45 GWYVGLRGG---LSGGTSTFVSAAADKYRPGWNAGFSGGYRF---NSVFSIEGILKWGEV 98
Query: 116 DSTFYRLKEKYF-IYGDVVLK 135
+ G +++
Sbjct: 99 TLGVRKGDVGANYWLGSDLVR 119
>gi|87198548|ref|YP_495805.1| hypothetical protein Saro_0524 [Novosphingobium aromaticivorans DSM
12444]
gi|87134229|gb|ABD24971.1| hypothetical protein Saro_0524 [Novosphingobium aromaticivorans DSM
12444]
Length = 57
Score = 34.8 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 6/53 (11%), Positives = 17/53 (32%), Gaps = 5/53 (9%)
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ Y Y + + + + + H +G++M F
Sbjct: 10 EVAISNRAFPKIEYVYTDYANAKFADEDVSLGI-----DYSRHQLLVGVSMRF 57
>gi|25140438|gb|AAN71716.1| App [Neisseria meningitidis H44/76]
Length = 1457
Score = 34.8 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 37/129 (28%), Gaps = 8/129 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G+ + + L+D I K +L GI+ + FGI H A +
Sbjct: 1287 FYIGISAGAGFSSGSLSDGIGGKIRRRVLH--YGIQARYRAGFGG--FGIEPHIGATRYF 1342
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + G + + + S+ S + +A
Sbjct: 1343 VQKADYRYENVNIATP----GLAFNRYRAGIKADYSFKPAQHISITPYLSLSYTDAASGK 1398
Query: 177 DGHGSSVVL 185
+ +
Sbjct: 1399 VRTRVNTAV 1407
>gi|226958393|ref|NP_001152976.1| xylanase [Ovis aries]
gi|226343633|gb|ACO48439.1| xylanase [Ovis aries]
Length = 282
Score = 34.8 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 40/165 (24%), Gaps = 15/165 (9%)
Query: 63 ISRLYETHPLADTINRK--TYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
I + D +++ + + + N +G G E + G + T + +
Sbjct: 20 IGSAFAADACKDAMSKSAGSGHGVSGNSVGSISGTPWGFEQWYQGGSASMTYYDNGTFKA 79
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ GY YG GG + +
Sbjct: 80 NWNNSNDYL----TRVGYQ------YGGGGI---DHKTKYFTVDYNYKKTGSAQYGYIGI 126
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+Y + D S Y+ + AK +
Sbjct: 127 YGWTANPETEYYIVDDWYSKPSENYVGEKFGEIEVDGAKYTIHAF 171
>gi|225875010|ref|YP_002756469.1| hypothetical protein ACP_3474 [Acidobacterium capsulatum ATCC
51196]
gi|225793768|gb|ACO33858.1| hypothetical protein ACP_3474 [Acidobacterium capsulatum ATCC
51196]
Length = 206
Score = 34.8 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 43/170 (25%), Gaps = 25/170 (14%)
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
D Y + G+G N++ +G+ + +++
Sbjct: 56 FIDGYTTSDYTASDLAGVGFFFDVNLKP---RWGMEGEANWLNY--HGSQGEKQQHYLLG 110
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ Y S + + + + G+ G LDY
Sbjct: 111 PRYRV-YRWHSASAFVK-----------FMMGAGREVFPDRIGKGSYFAFGP--GGTLDY 156
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
+ I + A Y Y+ E + + S+GI
Sbjct: 157 QLTPRIDVRADYEYLDWPKAP------NLGPEIPNNGMHPQGISIGIGYR 200
>gi|167589237|ref|ZP_02381625.1| OmpW family protein [Burkholderia ubonensis Bu]
Length = 274
Score = 34.8 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 20/163 (12%), Positives = 42/163 (25%), Gaps = 24/163 (14%)
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD----SLLIYGMGGFGGAYVID- 158
FG + + K + Y + + G ++ +
Sbjct: 112 FGPSGSLGNVDLGKAANQPAVKNARQWSPAVILQYYFNAPNARFRPFVGIGVSYSWFTNI 171
Query: 159 ---------------SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
S L + + + IG Y + +L+A+
Sbjct: 172 QLNGNFARDINENLGSVLAAGAGKPGPTSVEAKSSSSFTPIYNIGASYAITNRWALTATL 231
Query: 204 RYIPHHIHSVNN----SNAKSDVERVDRKGNAHIASLGINMHF 242
Y+P ++ + R K + I +GI+ F
Sbjct: 232 SYMPLKTYATTTIKAADGSTLATSRSKVKADPLITFVGISYKF 274
>gi|167564361|ref|ZP_02357277.1| outer membrane protein, OmpW family [Burkholderia oklahomensis
EO147]
gi|167571509|ref|ZP_02364383.1| outer membrane protein, OmpW family [Burkholderia oklahomensis
C6786]
Length = 239
Score = 34.8 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 46/193 (23%), Gaps = 13/193 (6%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR 121
++ H + +T + G L + + V GI S
Sbjct: 48 NVGGTPVNHEVPNTGAGIDNADTIGFAAGYFL-TDHIATELVAGIPPRFNLNGKGSLEQF 106
Query: 122 LKEKYFIYGDVVLKAGYSVD----SLLIYGMGGFGGAYVID--SSLEKVESDNSKNAKGR 175
+ L Y + Y G + S E
Sbjct: 107 GVLGHAYQWSPALLLKYYFNDAKAKFRPYVGVGASYIWFTGAKISNSAFERGVLGGPTSV 166
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI-- 233
+ + VL G Y S YIP + + + + + + + A I
Sbjct: 167 TTSNQWAPVLNAGFTYNFTDHWFGGLSVSYIPVSLTATLTTQRPTPIGTLTQTSQAKIRL 226
Query: 234 ----ASLGINMHF 242
L I F
Sbjct: 227 NPIVTYLNIGYRF 239
>gi|327394053|dbj|BAK11475.1| outer membrane protein W precursor OmpW [Pantoea ananatis AJ13355]
Length = 210
Score = 34.8 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 4/98 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y G D+ + D + D V +GLDY +N D L+AS
Sbjct: 117 PYVGIGVNYTTFYDADFNQTGRDAGLSDLSLKDSW--GVAGQVGLDYQINRDWMLNASLW 174
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ + + + + + + + G F
Sbjct: 175 YMDIDTQVKFKAGDQQ--QNIHMRVDPWVFFFGAGYRF 210
>gi|325515299|gb|ADZ24283.1| outer surface protein precursor [Wolbachia endosymbiont of
Polydrusus pilifer]
gi|325515301|gb|ADZ24284.1| outer surface protein precursor [Wolbachia endosymbiont of
Polydrusus inustus]
Length = 181
Score = 34.8 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 17/171 (9%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ + +G +++D I + + + + G + +
Sbjct: 18 GTDDVDPFKASFIGGGAAFGYKMDDIRVDIEGLYSQLNKNVNNDEVLTPDTVAGSLTAIS 77
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 78 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 129
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ Y V ++ L A RY + + + S + D + A G+
Sbjct: 130 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGGHTVLYSTVGAEAGV 180
>gi|189466442|ref|ZP_03015227.1| hypothetical protein BACINT_02817 [Bacteroides intestinalis DSM
17393]
gi|189434706|gb|EDV03691.1| hypothetical protein BACINT_02817 [Bacteroides intestinalis DSM
17393]
Length = 531
Score = 34.8 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 40/136 (29%), Gaps = 6/136 (4%)
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
T + + + + + L GY+V S L G + + E D +
Sbjct: 343 TYYELNDKDMKSEFELRTPWTYNLSIGYTVGSNLALG-AEYEYQDYSKMAFYYPEGDKME 401
Query: 171 NAKGRFDGHGSSV-VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ V IG +Y V + +L Y Y + + VD
Sbjct: 402 YESEEAKINNKGVSTFRIGAEYKVIPEFALRLGYNYSSAAFKNDAVKTLPYNSLNVDTDF 461
Query: 230 ----NAHIASLGINMH 241
+ +LGI
Sbjct: 462 ANTKSLSNYTLGIGYR 477
>gi|114775492|ref|ZP_01451060.1| long chain fatty acid transport protein [Mariprofundus ferrooxydans
PV-1]
gi|114553603|gb|EAU55984.1| long chain fatty acid transport protein [Mariprofundus ferrooxydans
PV-1]
Length = 398
Score = 34.8 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 38/123 (30%), Gaps = 23/123 (18%)
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+R ++ + + GY+ D I D
Sbjct: 299 FRAGAEWAYSETMRARLGYTYDPTPI---------------------DPVYFTPLLPGND 337
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+V +G G+D ++ +L +Y Y+ S + V K + H+A+ +
Sbjct: 338 RQAVHVGYGVD--LSDQATLDLAYTYVFFSNRLQTQSTGTNVVRNGTYKSHIHLAAASLT 395
Query: 240 MHF 242
F
Sbjct: 396 YRF 398
>gi|89887412|gb|ABD78352.1| outer surface protein precursor [Wolbachia endosymbiont of
Spalangia cameroni]
Length = 196
Score = 34.8 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 47/157 (29%), Gaps = 17/157 (10%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ + +G +++D I + + + + G + +
Sbjct: 35 GTDDVDPFKASFIGGGAAFGYKMDDIRVDIEGLYSQLNKNVNNDEVLTPDTVAGSLTAIS 94
Query: 137 G-----YSVD----SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
G Y + + Y G G AY+ + V SK +
Sbjct: 95 GLVNVYYDIAIEDMPITPYVGVGVGAAYISTPLKDAVNDQKSKFGFAGQ--------VKA 146
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
G+ Y V ++ L A RY + + + S + D
Sbjct: 147 GVSYDVTPEVKLYAGARYFGSYGANFDKSGGEKDKGG 183
>gi|332559662|ref|ZP_08413984.1| hypothetical protein RSWS8N_11405 [Rhodobacter sphaeroides WS8N]
gi|332277374|gb|EGJ22689.1| hypothetical protein RSWS8N_11405 [Rhodobacter sphaeroides WS8N]
Length = 722
Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 32/106 (30%), Gaps = 6/106 (5%)
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
S Y K + + + AG L YG G G + +
Sbjct: 137 DFVGTGIQSAEYVAATK-HLTPRLKVTAGVGWGRLGSYGSFG--GVGTRPEFVPQESEGG 193
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
NA F G + G+++ ++L A Y + + +
Sbjct: 194 EVNADQWFRGDMAGF---AGIEWQPTDRLTLKAEYSSDDYEEEAED 236
>gi|330827925|ref|YP_004390877.1| outer membrane protein [Aeromonas veronii B565]
gi|328803061|gb|AEB48260.1| Outer membrane protein [Aeromonas veronii B565]
Length = 208
Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 21/99 (21%), Gaps = 13/99 (13%)
Query: 145 IYGMGGFGGAYVIDSSLEKVES-DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
Y G + S L +GLDY N S Y
Sbjct: 122 AYAKPGIAYTRTEVEVVGNATFLGFSGQVNESATKSKVHPNLEVGLDYAFNDHFSAGIGY 181
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D + LG+ HF
Sbjct: 182 E------------RQFDALSLGDEHYSLDTFKLGLRYHF 208
>gi|152969802|ref|YP_001334911.1| outer membrane protein W [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238894304|ref|YP_002919038.1| outer membrane protein W [Klebsiella pneumoniae NTUH-K2044]
gi|330002705|ref|ZP_08304402.1| outer membrane protein W [Klebsiella sp. MS 92-3]
gi|150954651|gb|ABR76681.1| outer membrane protein W; colicin S4 receptor; putative transport
protein [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|238546620|dbj|BAH62971.1| outer membrane transport protein W and colicin S4 receptor
[Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|328537219|gb|EGF63483.1| outer membrane protein W [Klebsiella sp. MS 92-3]
Length = 224
Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 27/107 (25%), Gaps = 4/107 (3%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G + + Y G + + D +GLDY++N
Sbjct: 122 FGDAQSKVRPYVGAGINYTTFFNEDFNDTGKAAGLSDLSLKDSW--GAAGQVGLDYLINR 179
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D L+ S Y+ + + S G F
Sbjct: 180 DWLLNMSVWYMDIDTDVKFKAGGVDQKVSTRLDPWVFMFSAG--YRF 224
>gi|24375840|ref|NP_719883.1| outer membrane protein, putative [Shewanella oneidensis MR-1]
gi|24350799|gb|AAN57327.1|AE015869_3 outer membrane protein, putative [Shewanella oneidensis MR-1]
Length = 656
Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 49/161 (30%), Gaps = 18/161 (11%)
Query: 83 SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS 142
+ + Q D G+ T L E I DV +V++
Sbjct: 455 DMEGGAFNFGANYTYQFLD--LGVKTQYKYNDYIHTRLGLTESTSIGVDVYSNV--TVNN 510
Query: 143 LL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM--VNYDISL 199
L IY G SS + + + + + F V +G G Y + +S+
Sbjct: 511 QLRIYANAGVEQIDNNQSSGFESDLNWLADTQDSF------VYVGAGAIYQELFDLPLSI 564
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ YRY S A +D H + +N
Sbjct: 565 NMDYRYSESDSQSRIQPRASADYFNF-----THQFDISLNY 600
>gi|51246322|ref|YP_066206.1| hypothetical protein DP2470 [Desulfotalea psychrophila LSv54]
gi|50877359|emb|CAG37199.1| hypothetical protein DP2470 [Desulfotalea psychrophila LSv54]
Length = 754
Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 15/185 (8%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYRL 122
+ ++ N + + G G+N D + G + + + T
Sbjct: 486 GWAFAMPYYSNVSNNASPMGYDADIYGATAGYNHWIDSDLILGFHAGYGSGDINYTGKGY 545
Query: 123 KEKYFIY--GDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
++K G + +++ Y D L+ + F + S + + D H
Sbjct: 546 EQKKENLKAGSLGVQSLYRFADDWLLQSIASFYYSSNDYSDNNPLNREQG-------DYH 598
Query: 180 GSSVVLGIGLDYMV---NYDISLSASYRYIPHHIHSVNNSN-AKSDVERVDRKGNAHIAS 235
G V + LDY+ N + S RY+ H+ S N +DV D N A+
Sbjct: 599 GYGVNANLDLDYVFSFTNNRLVPSVGLRYLWQHVDSYTAYNLDNADVNYGDMDENQLYAN 658
Query: 236 LGINM 240
LG++
Sbjct: 659 LGLDW 663
>gi|83749546|ref|ZP_00946533.1| signal peptide outer membrane protein W [Ralstonia solanacearum
UW551]
gi|207744846|ref|YP_002261238.1| outer membrane protein w [Ralstonia solanacearum IPO1609]
gi|83723782|gb|EAP70973.1| signal peptide outer membrane protein W [Ralstonia solanacearum
UW551]
gi|206596256|emb|CAQ63183.1| outer membrane protein w [Ralstonia solanacearum IPO1609]
Length = 241
Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 38/144 (26%), Gaps = 11/144 (7%)
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVE-- 165
+ + ++ V+ K G + Y G + D +
Sbjct: 98 IEGTDSFARYGQIGSAKQWSPTVLAKWFFGGADSKFRPYVGAGLNYTWFTDEKITNSTFQ 157
Query: 166 ----SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS---VNNSNA 218
+ + VL +G Y + D + S Y+P + +N
Sbjct: 158 TQVLGGGFPSTSTVSTDSSLNPVLSVGATYAITKDWFVGLSVSYLPLKTTAKIDTTLANG 217
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ V N + L + F
Sbjct: 218 QHSVTEAKITINPIVTFLSVGYRF 241
>gi|126463609|ref|YP_001044723.1| protein of unknown function DUF940, membrane lipoprotein putative
[Rhodobacter sphaeroides ATCC 17029]
gi|126105273|gb|ABN77951.1| protein of unknown function DUF940, membrane lipoprotein putative
[Rhodobacter sphaeroides ATCC 17029]
Length = 722
Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 32/106 (30%), Gaps = 6/106 (5%)
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
S Y K + + + AG L YG G G + +
Sbjct: 137 DFVGTGIQSAEYVAATK-HLTPRLKVTAGVGWGRLGSYGSFG--GVGTRPEFVPQESEGG 193
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
NA F G + G+++ ++L A Y + + +
Sbjct: 194 EVNADQWFRGDMAGF---AGIEWQPTDRLTLKAEYSSDDYEEEAED 236
>gi|325201376|gb|ADY96830.1| adhesion and penetration protein [Neisseria meningitidis M01-240149]
Length = 1456
Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 37/129 (28%), Gaps = 8/129 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G+ + + L+D I K +L GI+ + FGI H A +
Sbjct: 1286 FYIGISAGAGFSSGSLSDGIGGKIRRRVLH--YGIQARYRAGFGG--FGIEPHIGATRYF 1341
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + G + + + S+ S + +A
Sbjct: 1342 VQKADYRYENVNIATP----GLAFNRYRAGIKADYSFKPAQHISITPYLSLSYTDAASGK 1397
Query: 177 DGHGSSVVL 185
+ +
Sbjct: 1398 VRTRVNTAV 1406
>gi|271500960|ref|YP_003333985.1| virulence-like outer membrane protein [Dickeya dadantii Ech586]
gi|270344515|gb|ACZ77280.1| virulence-related outer membrane protein [Dickeya dadantii Ech586]
Length = 171
Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 51/180 (28%), Gaps = 27/180 (15%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL 122
S + + + S+ G L + + ++ G+ T +D T
Sbjct: 19 GSAVAGESTVTLGYAQGDAQSVQNKLPGFNLKYRYEFDNSQLGVVGSFTYLQDSQTIDST 78
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
K YG + D IYG+ G + + ++ + +A
Sbjct: 79 YNKNQYYGFSAGPSFRFNDWASIYGLVGVSAGKFTFNQTDGSSNNRTSDA---------G 129
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V G GL + +++ Y V + N +G+ F
Sbjct: 130 FVYGAGLQFNPVQNVAFDVGYEQSRIRSVDVGSWN------------------VGVGYRF 171
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.122 0.336
Lambda K H
0.267 0.0374 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,581,519,817
Number of Sequences: 14124377
Number of extensions: 43984891
Number of successful extensions: 497801
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 2779
Number of HSP's successfully gapped in prelim test: 10349
Number of HSP's that attempted gapping in prelim test: 365811
Number of HSP's gapped (non-prelim): 61010
length of query: 242
length of database: 4,842,793,630
effective HSP length: 135
effective length of query: 107
effective length of database: 2,936,002,735
effective search space: 314152292645
effective search space used: 314152292645
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 79 (35.2 bits)