HHsearch alignment for GI: 254781079 and conserved domain: PRK09894

Probab=100.00  E-value=2.7e-38  Score=311.49  Aligned_cols=165  Identities=32%  Similarity=0.480  Sum_probs=151.0

Q ss_pred             HHHHHHHHHCCCHHCCCCHHHHHHHHHH-----CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHH
Q ss_conf             9999999610401050204899988877-----08972575544221000114688654443110000000111110000
Q gi|254781079|r   97 YNRISQLSRIDCLSGLLNHSAFISSLGS-----YNEKLSIVFFDIDYFKQINDNFGHPVGDKVIAFLSDQLVVVFGTPMF  171 (266)
Q Consensus        97 ~~~l~~~a~~D~LTgL~NR~~f~~~l~~-----~~~~~~l~~idid~fk~iNd~~G~~~gD~~L~~va~~l~~~~~~~~~  171 (266)
T Consensus       123 ~~~~~~~A~~D~LTGL~NRr~f~e~le~~l~~~~~~~~allliDiD~FK~IND~~GH~~GD~vL~~vA~~L~~~lr~~d~  202 (293)
T PRK09894        123 IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNREPLNLYLALLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRPYET  202 (293)
T ss_pred             HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf             99998870888534815489999999999985679977999997856637775878588999999999999985898788


Q ss_pred             HCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf             00133430365016861012344458999998631540679956899999999877998998999999999999999709
Q gi|254781079|r  172 VGRLGGEEFAAAALGSSEQEAAILANDLRKIIENSQINISSGPSIHITISAGIAERCHKEPISTIIYRADQALYVAKKSG  251 (266)
Q Consensus       172 ~~R~~gdeF~ill~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~s~Gia~~~~~~~~~~ll~~Ad~Al~~AK~~g  251 (266)
T Consensus       203 vaR~GGDEF~ill~~~~~~~a~~~aeri~~~i~~~~~~~-~~~~i~it~SiGia~~~~~~~~e~Ll~~AD~ALY~AK~~G  281 (293)
T PRK09894        203 VYRYGGEEFIIILKAATDEEACRAGERIRQLIANQAITH-SEGRINITATFGVTRAFPEEPLDEVIGRADRAMYEGKQAG  281 (293)
T ss_pred             EEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEE-CCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             997079658998489999999999999999997189556-8988999999999988999999999999999999999808


Q ss_pred             CCEEEECCHHH
Q ss_conf             96899940210
Q gi|254781079|r  252 RNRVVCFSDIE  262 (266)
Q Consensus       252 kn~~~~~~~~~  262 (266)
T Consensus       282 RNrv~ffdee~  292 (293)
T PRK09894        282 RNRVMFIDEQN  292 (293)
T ss_pred             CCEEEEECCCC
T ss_conf             99899970896