HHsearch alignment of GI: 254781079 and MMDB domain: 1w25_A_285-459

>1w25_A (A:285-459) Stalked-cell differentiation controlling protein; two-component system, response regulator, diguanylate cyclase, ggdef domain; HET: C2E; 2.70A {Caulobacter vibrioides}
Probab=99.94  E-value=5.8e-27  Score=224.61  Aligned_cols=164  Identities=30%  Similarity=0.468  Sum_probs=144.7

Q ss_pred             HHHHCCCHHCCCCHHHHHHHHHH-------CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCC
Q ss_conf             99610401050204899988877-------08972575544221000114688654443110000000111110000001
Q gi|254781079|r  102 QLSRIDCLSGLLNHSAFISSLGS-------YNEKLSIVFFDIDYFKQINDNFGHPVGDKVIAFLSDQLVVVFGTPMFVGR  174 (266)
Q Consensus       102 ~~a~~D~LTgL~NR~~f~~~l~~-------~~~~~~l~~idid~fk~iNd~~G~~~gD~~L~~va~~l~~~~~~~~~~~R  174 (266)
                      +++++|||||||||.+|.+++++       .++++++++||||+||.||+.|||+.||++|+.+|++|+..+++.+.++|
T Consensus         2 ~la~~D~lTGL~NR~~f~~~l~~~i~~~~~~~~~~~l~~i~i~~~~~in~~~G~~~gd~ll~~~a~~l~~~~~~~~~~~r   81 (175)
T 1w25_A            2 ELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCR   81 (175)
T ss_dssp             TTCCBCTTTCCBCHHHHHHHHHHHHHHHHTSSCCCEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             75022124563259999986589999987429869870212147767643542156776899999988872899858999


Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC-CCCCCEEEEEEEEEEEECC-CCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf             33430365016861012344458999998631540-6799568999999998779-989989999999999999997099
Q gi|254781079|r  175 LGGEEFAAAALGSSEQEAAILANDLRKIIENSQIN-ISSGPSIHITISAGIAERC-HKEPISTIIYRADQALYVAKKSGR  252 (266)
Q Consensus       175 ~~gdeF~ill~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~t~s~Gia~~~-~~~~~~~ll~~Ad~Al~~AK~~gk  252 (266)
                      +++|+|+++++.....+.....+.+...+...+.. ........+++|+|++.++ ++.++++++.+||.||++||++|+
T Consensus        82 ~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~ll~~A~~Al~~Ak~~G~  161 (175)
T 1w25_A           82 YGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGR  161 (175)
T ss_dssp             CSSSEEEEEETTCCHHHHHHHHHHHHHHHHTSCEECGGGSCEECCCEEEEEEECCSTTCCHHHHHHHHHHHHHHHHHTTS
T ss_pred             EECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             80658999978999999999999999999768936658988999999999997079999899999999999999997299


Q ss_pred             CEEEECCHHHCCC
Q ss_conf             6899940210056
Q gi|254781079|r  253 NRVVCFSDIENNT  265 (266)
Q Consensus       253 n~~~~~~~~~~~~  265 (266)
                      |++++|+.-.+++
T Consensus       162 n~~~~y~~~~~~~  174 (175)
T 1w25_A          162 NAVVGKAAHHHHH  174 (175)
T ss_dssp             SCEEECCCC----
T ss_pred             CEEEECCCCCCCC
T ss_conf             9499711250427