HHsearch alignment of GI: 254781079 and MMDB domain: 1w25_A_285-459
>1w25_A (A:285-459) Stalked-cell differentiation controlling protein; two-component system, response regulator, diguanylate cyclase, ggdef domain; HET: C2E; 2.70A {Caulobacter vibrioides}
Probab=99.94 E-value=5.8e-27 Score=224.61 Aligned_cols=164 Identities=30% Similarity=0.468 Sum_probs=144.7
Q ss_pred HHHHCCCHHCCCCHHHHHHHHHH-------CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCC
Q ss_conf 99610401050204899988877-------08972575544221000114688654443110000000111110000001
Q gi|254781079|r 102 QLSRIDCLSGLLNHSAFISSLGS-------YNEKLSIVFFDIDYFKQINDNFGHPVGDKVIAFLSDQLVVVFGTPMFVGR 174 (266)
Q Consensus 102 ~~a~~D~LTgL~NR~~f~~~l~~-------~~~~~~l~~idid~fk~iNd~~G~~~gD~~L~~va~~l~~~~~~~~~~~R 174 (266)
+++++|||||||||.+|.+++++ .++++++++||||+||.||+.|||+.||++|+.+|++|+..+++.+.++|
T Consensus 2 ~la~~D~lTGL~NR~~f~~~l~~~i~~~~~~~~~~~l~~i~i~~~~~in~~~G~~~gd~ll~~~a~~l~~~~~~~~~~~r 81 (175)
T 1w25_A 2 ELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCR 81 (175)
T ss_dssp TTCCBCTTTCCBCHHHHHHHHHHHHHHHHTSSCCCEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 75022124563259999986589999987429869870212147767643542156776899999988872899858999
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC-CCCCCEEEEEEEEEEEECC-CCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 33430365016861012344458999998631540-6799568999999998779-989989999999999999997099
Q gi|254781079|r 175 LGGEEFAAAALGSSEQEAAILANDLRKIIENSQIN-ISSGPSIHITISAGIAERC-HKEPISTIIYRADQALYVAKKSGR 252 (266)
Q Consensus 175 ~~gdeF~ill~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~t~s~Gia~~~-~~~~~~~ll~~Ad~Al~~AK~~gk 252 (266)
+++|+|+++++.....+.....+.+...+...+.. ........+++|+|++.++ ++.++++++.+||.||++||++|+
T Consensus 82 ~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~~ll~~A~~Al~~Ak~~G~ 161 (175)
T 1w25_A 82 YGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGR 161 (175)
T ss_dssp CSSSEEEEEETTCCHHHHHHHHHHHHHHHHTSCEECGGGSCEECCCEEEEEEECCSTTCCHHHHHHHHHHHHHHHHHTTS
T ss_pred EECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 80658999978999999999999999999768936658988999999999997079999899999999999999997299
Q ss_pred CEEEECCHHHCCC
Q ss_conf 6899940210056
Q gi|254781079|r 253 NRVVCFSDIENNT 265 (266)
Q Consensus 253 n~~~~~~~~~~~~ 265 (266)
|++++|+.-.+++
T Consensus 162 n~~~~y~~~~~~~ 174 (175)
T 1w25_A 162 NAVVGKAAHHHHH 174 (175)
T ss_dssp SCEEECCCC----
T ss_pred CEEEECCCCCCCC
T ss_conf 9499711250427