HHsearch results for GI: 254781079 and protein with PDBid: 1w25_A

>1w25_A Stalked-cell differentiation controlling protein; two-component system, response regulator, diguanylate cyclase, ggdef domain; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=100.00  E-value=1.2e-39  Score=320.21  Aligned_cols=166  Identities=30%  Similarity=0.465  Sum_probs=149.6

Q ss_pred             HHHHHHHHHHHCCCHHCCCCHHHHHHHHHH-------CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
Q ss_conf             999999999610401050204899988877-------0897257554422100011468865444311000000011111
Q gi|254781079|r   95 ISYNRISQLSRIDCLSGLLNHSAFISSLGS-------YNEKLSIVFFDIDYFKQINDNFGHPVGDKVIAFLSDQLVVVFG  167 (266)
Q Consensus        95 ~~~~~l~~~a~~D~LTgL~NR~~f~~~l~~-------~~~~~~l~~idid~fk~iNd~~G~~~gD~~L~~va~~l~~~~~  167 (266)
                      +..+++.++|++|||||||||++|.+++++       .+.+++|+++|||+||.|||+|||.+||++|+++|++|+.++|
T Consensus       279 ~~~~~l~~la~~D~LTgL~NR~~~~~~l~~~i~~a~r~~~~~al~~lDlD~FK~iND~~GH~~GD~vL~~va~~L~~~~r  358 (459)
T 1w25_A          279 NNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVR  358 (459)
T ss_dssp             SSSSCCSTTCCBCTTTCCBCHHHHHHHHHHHHHHHHTSSCCCEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHCCHHHCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             99987664127686568712999999889999998742987999996043014021134826789999999999997289


Q ss_pred             CCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC-CCEEEEEEEEEEEECC-CCCCHHHHHHHHHHHHH
Q ss_conf             000000133430365016861012344458999998631540679-9568999999998779-98998999999999999
Q gi|254781079|r  168 TPMFVGRLGGEEFAAAALGSSEQEAAILANDLRKIIENSQINISS-GPSIHITISAGIAERC-HKEPISTIIYRADQALY  245 (266)
Q Consensus       168 ~~~~~~R~~gdeF~ill~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~t~s~Gia~~~-~~~~~~~ll~~Ad~Al~  245 (266)
                      ++|+++|+|||||+|++|+++.+++..++++|+..+...++...+ +..+.+|+|+||+.++ +++++++|+++||.|||
T Consensus       359 ~~d~vaR~GGDEF~ill~~~~~~~a~~~a~ri~~~i~~~~f~~~~~~~~~~vt~SiGia~~~~~~~~~~~Ll~~AD~Amy  438 (459)
T 1w25_A          359 AIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVY  438 (459)
T ss_dssp             TTSEEEECSSSEEEEEETTCCHHHHHHHHHHHHHHHHTSCEECGGGSCEECCCEEEEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf             88689998576799997899999999999999999966893665898899999999999717999989999999999999


Q ss_pred             HHHHCCCCEEEECCH
Q ss_conf             999709968999402
Q gi|254781079|r  246 VAKKSGRNRVVCFSD  260 (266)
Q Consensus       246 ~AK~~gkn~~~~~~~  260 (266)
                      +||++||||||..+-
T Consensus       439 ~AK~~Grnrvv~~~~  453 (459)
T 1w25_A          439 QAKASGRNAVVGKAA  453 (459)
T ss_dssp             HHHHTTSSCEEECCC
T ss_pred             HHHHHCCCEEEECCC
T ss_conf             999719995998000