HHsearch results for GI: 254781079 and protein with PDBid: 1w25_A
>1w25_A Stalked-cell differentiation controlling protein; two-component system, response regulator, diguanylate cyclase, ggdef domain; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=100.00 E-value=1.2e-39 Score=320.21 Aligned_cols=166 Identities=30% Similarity=0.465 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHCCCHHCCCCHHHHHHHHHH-------CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
Q ss_conf 999999999610401050204899988877-------0897257554422100011468865444311000000011111
Q gi|254781079|r 95 ISYNRISQLSRIDCLSGLLNHSAFISSLGS-------YNEKLSIVFFDIDYFKQINDNFGHPVGDKVIAFLSDQLVVVFG 167 (266)
Q Consensus 95 ~~~~~l~~~a~~D~LTgL~NR~~f~~~l~~-------~~~~~~l~~idid~fk~iNd~~G~~~gD~~L~~va~~l~~~~~ 167 (266)
+..+++.++|++|||||||||++|.+++++ .+.+++|+++|||+||.|||+|||.+||++|+++|++|+.++|
T Consensus 279 ~~~~~l~~la~~D~LTgL~NR~~~~~~l~~~i~~a~r~~~~~al~~lDlD~FK~iND~~GH~~GD~vL~~va~~L~~~~r 358 (459)
T 1w25_A 279 NNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVR 358 (459)
T ss_dssp SSSSCCSTTCCBCTTTCCBCHHHHHHHHHHHHHHHHTSSCCCEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHCCHHHCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 99987664127686568712999999889999998742987999996043014021134826789999999999997289
Q ss_pred CCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC-CCEEEEEEEEEEEECC-CCCCHHHHHHHHHHHHH
Q ss_conf 000000133430365016861012344458999998631540679-9568999999998779-98998999999999999
Q gi|254781079|r 168 TPMFVGRLGGEEFAAAALGSSEQEAAILANDLRKIIENSQINISS-GPSIHITISAGIAERC-HKEPISTIIYRADQALY 245 (266)
Q Consensus 168 ~~~~~~R~~gdeF~ill~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~t~s~Gia~~~-~~~~~~~ll~~Ad~Al~ 245 (266)
++|+++|+|||||+|++|+++.+++..++++|+..+...++...+ +..+.+|+|+||+.++ +++++++|+++||.|||
T Consensus 359 ~~d~vaR~GGDEF~ill~~~~~~~a~~~a~ri~~~i~~~~f~~~~~~~~~~vt~SiGia~~~~~~~~~~~Ll~~AD~Amy 438 (459)
T 1w25_A 359 AIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVY 438 (459)
T ss_dssp TTSEEEECSSSEEEEEETTCCHHHHHHHHHHHHHHHHTSCEECGGGSCEECCCEEEEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 88689998576799997899999999999999999966893665898899999999999717999989999999999999
Q ss_pred HHHHCCCCEEEECCH
Q ss_conf 999709968999402
Q gi|254781079|r 246 VAKKSGRNRVVCFSD 260 (266)
Q Consensus 246 ~AK~~gkn~~~~~~~ 260 (266)
+||++||||||..+-
T Consensus 439 ~AK~~Grnrvv~~~~ 453 (459)
T 1w25_A 439 QAKASGRNAVVGKAA 453 (459)
T ss_dssp HHHHTTSSCEEECCC
T ss_pred HHHHHCCCEEEECCC
T ss_conf 999719995998000