HHsearch results for GI: 254781079 and protein with PDBid: 3hva_A
>3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1}
Probab=99.95 E-value=3e-28 Score=233.21 Aligned_cols=165 Identities=21% Similarity=0.312 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHCCCHHCCCCHHHHHHHHHH-------CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
Q ss_conf 999999999610401050204899988877-------0897257554422100011468865444311000000011111
Q gi|254781079|r 95 ISYNRISQLSRIDCLSGLLNHSAFISSLGS-------YNEKLSIVFFDIDYFKQINDNFGHPVGDKVIAFLSDQLVVVFG 167 (266)
Q Consensus 95 ~~~~~l~~~a~~D~LTgL~NR~~f~~~l~~-------~~~~~~l~~idid~fk~iNd~~G~~~gD~~L~~va~~l~~~~~ 167 (266)
..++++++++++||+||||||.+|.++++. .+.++++++|+||+|+.+|+.||++.||++|+.++++|+..++
T Consensus 4 ~~e~~l~~~a~~D~lTgl~Nr~~f~~~l~~~l~~~~~~~~~~~l~~i~i~~~~~i~~~~G~~~~d~~l~~~a~~l~~~~~ 83 (177)
T 3hva_A 4 GSEEKLREVSSQDPVTGLYNRSHFLDLMDAAVQQAVTARKPSTLAYIHLNGYPSLQADHGLSGIDLLLGQLAGLMREQFG 83 (177)
T ss_dssp --------CCCBCTTTCSEEHHHHHHHHHHHHHHHHHTCCCEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999827677678205999999999999999854995799997133688999981934678999999876202466
Q ss_pred CCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECC-CCCCHHHHHHHHHHHHHH
Q ss_conf 0000001334303650168610123444589999986315406799568999999998779-989989999999999999
Q gi|254781079|r 168 TPMFVGRLGGEEFAAAALGSSEQEAAILANDLRKIIENSQINISSGPSIHITISAGIAERC-HKEPISTIIYRADQALYV 246 (266)
Q Consensus 168 ~~~~~~R~~gdeF~ill~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~s~Gia~~~-~~~~~~~ll~~Ad~Al~~ 246 (266)
+++.++|+++|+|++++|+.+.+++..+++++...+...++. .++..+.+++|+|++.++ ++.++++++.+|+.||++
T Consensus 84 ~~~~~~R~~~~~F~il~~~~~~~~~~~~~~~l~~~i~~~~~~-~~~~~~~~~~siGia~~~~~~~~~~~ll~~A~~Al~~ 162 (177)
T 3hva_A 84 EEADLARFGDSIFAALFKGKTPEQAQAALQRLLKKVENHLFE-LNGRSAQATLSIGVAGLDEKTAKAQDVMNRAHRCADD 162 (177)
T ss_dssp GGCEEEECSSSEEEEEEETCCHHHHHHHHHHHHHHHHTCCEE-ETTEEECCCEEEEEEEECTTCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC-CCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 515888658998999969999999999999999999676644-5796167889999999589999999999999999999
Q ss_pred HHHCCCCEEEECCH
Q ss_conf 99709968999402
Q gi|254781079|r 247 AKKSGRNRVVCFSD 260 (266)
Q Consensus 247 AK~~gkn~~~~~~~ 260 (266)
||++|+|+|++|++
T Consensus 163 Ak~~G~n~~~~y~p 176 (177)
T 3hva_A 163 AARKGGSQIKQYNP 176 (177)
T ss_dssp HHTTCSSEEEC---
T ss_pred HHHHCCCEEEEECC
T ss_conf 99978997999589