HHsearch results for GI: 254781079 and protein with PDBid: 3mtk_A
>3mtk_A Diguanylate cyclase/phosphodiesterase; structural genomics, PSI-2, protein structure initiative; 2.24A {Caldicellulosiruptor saccharolyticus}
Probab=99.95 E-value=1e-28 Score=236.81 Aligned_cols=161 Identities=22% Similarity=0.295 Sum_probs=140.6
Q ss_pred HHHHHHHHCCCHHCCCCHHHHHHHHHH-----CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHH
Q ss_conf 999999610401050204899988877-----089725755442210001146886544431100000001111100000
Q gi|254781079|r 98 NRISQLSRIDCLSGLLNHSAFISSLGS-----YNEKLSIVFFDIDYFKQINDNFGHPVGDKVIAFLSDQLVVVFGTPMFV 172 (266)
Q Consensus 98 ~~l~~~a~~D~LTgL~NR~~f~~~l~~-----~~~~~~l~~idid~fk~iNd~~G~~~gD~~L~~va~~l~~~~~~~~~~ 172 (266)
.+|+++|++||+||||||.+|.++++. ...++++++++||+|+.||+.||++.||++|+.+|++|+..+++++.+
T Consensus 1 srl~~lA~~D~lTgL~Nr~~f~~~l~~~~~~~~~~~~~l~~i~Id~f~~in~~~G~~~gd~~L~~~a~~L~~~~~~~~~~ 80 (178)
T 3mtk_A 1 SKLEFLAFYDELTGLPNKNSLIRWLNLKVSQMDCIDTYLIFLEVRDLEKLNVTYGYDLVDELIIHISKRIKDIAGEGNKA 80 (178)
T ss_dssp -CHHHHHHBCTTTCSBCHHHHHHHHHHHHHSSCCTTEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHHCSSSEE
T ss_pred CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 97789851572248603999999999999855389869999988728999887097036689998999999854778779
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECC-CCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 01334303650168610123444589999986315406799568999999998779-98998999999999999999709
Q gi|254781079|r 173 GRLGGEEFAAAALGSSEQEAAILANDLRKIIENSQINISSGPSIHITISAGIAERC-HKEPISTIIYRADQALYVAKKSG 251 (266)
Q Consensus 173 ~R~~gdeF~ill~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~s~Gia~~~-~~~~~~~ll~~Ad~Al~~AK~~g 251 (266)
||++||+|++++|+.+ +..+++++...+... + ..++..+.+++|+|++.++ ++.++++++++|+.||++||+.|
T Consensus 81 ~R~~~d~F~ill~~~~---~~~~~~~~~~~l~~~-~-~~~~~~~~~~~siGia~~~~~~~~~~~ll~~A~~Al~~Ak~~G 155 (178)
T 3mtk_A 81 FKIGFDRFAIICKSEN---ISDFIERMLSQLLLP-Y-NVNGNLIRVNFNIGAAQIENSNEAAANLMRRCDLALIKAKEEG 155 (178)
T ss_dssp EEEETTEEEEEEECSS---HHHHHHHHHHHHTSC-E-EETTEEECCCEEEEEEECC----CHHHHHHHHHHHHHHHHHHC
T ss_pred EECCCCEEEEECCCCC---HHHHHHHHHHHCCCC-E-EECCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 9738988999879974---999999999853377-2-2055279998889999978999999999999999999999859
Q ss_pred CCEEEECCH-HHC
Q ss_conf 968999402-100
Q gi|254781079|r 252 RNRVVCFSD-IEN 263 (266)
Q Consensus 252 kn~~~~~~~-~~~ 263 (266)
+|++++|++ ++.
T Consensus 156 ~n~~~~y~~~m~~ 168 (178)
T 3mtk_A 156 LNEYVIFKPSIEI 168 (178)
T ss_dssp TTCEEEEEC-CEE
T ss_pred CCEEEEECHHHHH
T ss_conf 9989998879999