RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254781082|ref|YP_003065495.1| hypothetical protein
CLIBASIA_04920 [Candidatus Liberibacter asiaticus str. psy62]
         (108 letters)



>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase
          {Thermotoga maritima [TaxId: 2336]}
          Length = 414

 Score = 31.6 bits (70), Expect = 0.021
 Identities = 5/39 (12%), Positives = 18/39 (46%), Gaps = 4/39 (10%)

Query: 20 NSIVEALRKAKPSMSDLAMLSVEERDAIL----DDLEKN 54
          + ++E  +K + +   L   +  E++  +    + L++ 
Sbjct: 1  DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDER 39


>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's
          yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 436

 Score = 29.4 bits (65), Expect = 0.074
 Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 4/39 (10%)

Query: 20 NSIVEALRKAKPSMSDLAMLSVEERDAILDD----LEKN 54
          +S  +  + A+ + + L  +S E R  IL      L+ N
Sbjct: 3  SSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKAN 41


>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
          {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
          Length = 494

 Score = 26.1 bits (57), Expect = 0.75
 Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 4/39 (10%)

Query: 20 NSIVEALRKAKPSMSDLAMLSVEERDAIL----DDLEKN 54
          +  V+A R A    S    +    R  +L    D +E++
Sbjct: 54 DKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERD 92


>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
          {Sheep (Ovis aries) [TaxId: 9940]}
          Length = 494

 Score = 26.1 bits (57), Expect = 0.88
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 23 VEALRKAKPSMSDLAMLSVEERDAILDDL 51
          V+A R+A    S    +   ER  +L+ L
Sbjct: 57 VKAARQAFQIGSPWRTMDASERGRLLNKL 85


>d1uyra2 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxylase
           {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 404

 Score = 26.1 bits (57), Expect = 0.93
 Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 5/36 (13%)

Query: 9   REFIEYWRLER----NSIVEALRKAKPSMSDLAMLS 40
           R F  +WRL R      +++ L       S L  ++
Sbjct: 305 RRFF-FWRLRRRLNEEYLIKRLSHQVGEASRLEKIA 339


>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
          {Streptococcus mutans [TaxId: 1309]}
          Length = 474

 Score = 24.8 bits (53), Expect = 2.0
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 7/39 (17%)

Query: 20 NSIVEALRKAKPSMSDLAMLSVEERDAIL----DDLEKN 54
          + +  + +KA+P+   L   S  ER A L    D L ++
Sbjct: 42 DYVYASAKKAQPAWRAL---SYIERAAYLHKVADILMRD 77


>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
          {Vibrio harveyi [TaxId: 669]}
          Length = 504

 Score = 24.3 bits (51), Expect = 2.8
 Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 7/39 (17%)

Query: 20 NSIVEALRKAKPSMSDLAMLSVEERDAIL----DDLEKN 54
          N    A  K       L   +  +R ++L     +LE  
Sbjct: 29 NQAATAAAKVARDFRRL---NNSKRASLLRTIASELEAR 64


>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
          {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 446

 Score = 24.1 bits (51), Expect = 3.6
 Identities = 7/31 (22%), Positives = 17/31 (54%)

Query: 21 SIVEALRKAKPSMSDLAMLSVEERDAILDDL 51
          SI + +++A+ + +     S++ R   L+ L
Sbjct: 1  SISDTVKRAREAFNSGKTRSLQFRIQQLEAL 31


>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus
           (Geotrichum candidum), ATCC 34614 [TaxId: 27317]}
          Length = 544

 Score = 23.9 bits (50), Expect = 4.0
 Identities = 9/69 (13%), Positives = 22/69 (31%), Gaps = 5/69 (7%)

Query: 24  EALRKAKPSMSDLAMLSVEERDAILDDLEKNGSSDYSFVNDLWERLKYLRDLPVYNFSLD 83
           + L    P  + +      +   +   L     SD  F +     L   +D+  + +   
Sbjct: 396 QTLSVGSPFRTGILNALTPQFKRVAAIL-----SDMLFQSPRRVMLSATKDVNRWTYLST 450

Query: 84  YVSRFHSFV 92
           ++     F+
Sbjct: 451 HLHNLVPFL 459


>d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus
          [TaxId: 1422]}
          Length = 388

 Score = 23.6 bits (50), Expect = 4.3
 Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 3/51 (5%)

Query: 12 IEYWRLERNSIVEALRK--AKPSMSDL-AMLSVEERDAILDDLEKNGSSDY 59
           +YW   R  I + L     +     +  + S  +R          G+ DY
Sbjct: 27 FKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDRACEAYAQLVGGTVDY 77


>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase
          YdcW {Escherichia coli [TaxId: 562]}
          Length = 474

 Score = 23.6 bits (50), Expect = 4.9
 Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 7/40 (17%)

Query: 20 NSIVEALRKAKPSMSDLAMLSVEERDAIL----DDLEKNG 55
          ++ V A   A          + + R   L    D +E+NG
Sbjct: 42 DAAVRAADAAFAEWGQT---TPKVRAECLLKLADVIEENG 78


>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
           toxin zeta subunit {Streptococcus pyogenes [TaxId:
           1314]}
          Length = 273

 Score = 23.0 bits (48), Expect = 7.8
 Identities = 8/37 (21%), Positives = 12/37 (32%)

Query: 16  RLERNSIVEALRKAKPSMSDLAMLSVEERDAILDDLE 52
           ++    I   L + +  M         E  AI   LE
Sbjct: 232 KVSGKEIQPTLERIEQKMVLNKHQETPEFKAIQQKLE 268


>d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase,
           C-terminal domain {Maize (Zea mays) [TaxId: 4577]}
          Length = 356

 Score = 22.5 bits (47), Expect = 9.6
 Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 15/97 (15%)

Query: 10  EFIEYWRLERNSIVEALRKAKPSMSDLAMLSVEERDAILDDLEKNGSSDYSFVNDLWERL 69
           E + +   ER   V  +  A          ++E R   LD L     SD+  +       
Sbjct: 46  EHMFFASDERIKAVRQMIMAP---------TLELRQQALDRLLPYQRSDFEGI------F 90

Query: 70  KYLRDLPVYNFSLDYVSRFHSFVSDEVAVWYEVTKEK 106
           + +  LPV    LD          +   +  E+  E 
Sbjct: 91  RAMDGLPVTIRLLDPPLHEFLPEGNIEDIVSELCAET 127


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.132    0.383 

Gapped
Lambda     K      H
   0.267   0.0576    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 421,586
Number of extensions: 18119
Number of successful extensions: 93
Number of sequences better than 10.0: 1
Number of HSP's gapped: 93
Number of HSP's successfully gapped: 29
Length of query: 108
Length of database: 2,407,596
Length adjustment: 68
Effective length of query: 40
Effective length of database: 1,473,956
Effective search space: 58958240
Effective search space used: 58958240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.2 bits)