HHsearch alignment for GI: 254781085 and conserved domain: CHL00019

>CHL00019 atpF ATP synthase CF0 B subunit.
Probab=97.71  E-value=0.003  Score=37.41  Aligned_cols=124  Identities=12%  Similarity=0.086  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999622889999999999999999999999999999999999999999999999999999999999999
Q gi|254781085|r   10 FMSLIIFLVIVVYLRIPSILLSFLDAHADKIRDDIFEARRLREKSENILMQYKEKHSKVEEETREIILAAKHRAKILAEE   89 (173)
Q Consensus        10 ~i~f~il~~il~~~~~~~~i~~~l~~R~~~I~~~l~~A~~~~~~a~~~~~~~~~~l~~a~~ea~~i~~~a~~~a~~~~e~   89 (173)
T Consensus        27 letnlINl~Ivi~i-L~~f~~~~L~~~L~~R~~~---I~~~I~eAE~~~~eA~~~L~----e~~~~L~~A~~eA~~I~~~   98 (184)
T CHL00019         27 LETNLINLSVVLGV-LIYFGKGVLSDLLDNRKQR---ILNTIRNSEERREEAIEKLE----KARARLRQAEIEADEIRVN   98 (184)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999-9999599999999999999---99999999999999999999----9999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             9999999999999999999999999999999999999999999999994339
Q gi|254781085|r   90 GCQNIEQISALYLKDLEQKIHYMKLEAKRLLYAKIADFSVEIVREIISQKMN  141 (173)
Q Consensus        90 ~~~~a~~~~~~~~~~a~~~I~~~~~~a~~~l~~~~~~la~~~~~kil~~~l~  141 (173)
T Consensus        99 A~~~ae~~k~~i~~~a~~e~erl~~~A~~~I~~E~~kA~~elr~ev~~lAl~  150 (184)
T CHL00019         99 GYSEIEREKLNLINSTYEDLERLENYKNETIRFEQQRAINQVRQQVFQLALQ  150 (184)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999999999999999999999999999999999999