HHsearch alignment for GI: 254781085 and conserved domain: CHL00118
>CHL00118 atpG ATP synthase CF0 B' subunit; Validated.
Probab=99.95 E-value=6e-26 Score=169.14 Aligned_cols=137 Identities=18% Similarity=0.327 Sum_probs=129.0
Q ss_pred CCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9979899999-999999999999962288999999999999999999999999999999999999999999999999999
Q gi|254781085|r 1 MHFDETFLVF-MSLIIFLVIVVYLRIPSILLSFLDAHADKIRDDIFEARRLREKSENILMQYKEKHSKVEEETREIILAA 79 (173)
Q Consensus 1 m~~d~tfw~~-i~f~il~~il~~~~~~~~i~~~l~~R~~~I~~~l~~A~~~~~~a~~~~~~~~~~l~~a~~ea~~i~~~a 79 (173)
T Consensus 19 ~~~n~Tl~~q~i~FliL~~lL-~kf~~~Pi~~~ld~R~~~I~~~l~~Ae~~~~ea~~~~~eye~~L~~Ar~Ea~~ii~~A 97 (156)
T CHL00118 19 FDFNATLPLMALQFLLLMVLL-NAIFYKPIGKILDEREEYIRSNLAKASSKLAKANELTAQYEEQLSKARKEAQLLIAQS 97 (156)
T ss_pred CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 086589999999999999999-9998989999999999999988999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999999994
Q gi|254781085|r 80 KHRAKILAEEGCQNIEQISALYLKDLEQKIHYMKLEAKRLLYAKIADFSVEIVREIISQ 138 (173)
Q Consensus 80 ~~~a~~~~e~~~~~a~~~~~~~~~~a~~~I~~~~~~a~~~l~~~~~~la~~~~~kil~~ 138 (173)
T Consensus 98 ~~~a~~~~~~i~~~A~~ea~~~i~~A~~eIe~ek~~a~~el~~ev~~la~~ia~Kil~k 156 (156)
T CHL00118 98 QKEAQEIVQEELKQAQKNAESLVEEATKQLEIQKEQALKSLESQVDTLSDQIKSKLLSK 156 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999999999999999999999999999987585