HHsearch alignment for GI: 254781085 and conserved domain: CHL00118
>CHL00118 atpG ATP synthase CF0 B' subunit; Validated.
Probab=98.10 E-value=0.0006 Score=41.50 Aligned_cols=113 Identities=13% Similarity=0.144 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999962288999999999999999999999999999999999999999999999999999999999999999
Q gi|254781085|r 12 SLIIFLVIVVYLRIPSILLSFLDAHADKIRDDIFEARRLREKSENILMQYKEKHSKVEEETREIILAAKHRAKILAEEGC 91 (173)
Q Consensus 12 ~f~il~~il~~~~~~~~i~~~l~~R~~~I~~~l~~A~~~~~~a~~~~~~~~~~l~~a~~ea~~i~~~a~~~a~~~~e~~~ 91 (173)
T Consensus 26 ~~q~i~FliL~~lL~kf~~~-------Pi~~~ld~R~~~I~~~l~~Ae~~~~ea~~~~~eye~~L~~Ar~Ea~~ii~~A~ 98 (156)
T CHL00118 26 PLMALQFLLLMVLLNAIFYK-------PIGKILDEREEYIRSNLAKASSKLAKANELTAQYEEQLSKARKEAQLLIAQSQ 98 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999898-------99999999999999889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999999999999
Q gi|254781085|r 92 QNIEQISALYLKDLEQKIHYMKLEAKRLLYAKIADFSVEI 131 (173)
Q Consensus 92 ~~a~~~~~~~~~~a~~~I~~~~~~a~~~l~~~~~~la~~~ 131 (173)
T Consensus 99 ~~a~~~~~~i~~~A~~ea~~~i~~A~~eIe~ek~~a~~el 138 (156)
T CHL00118 99 KEAQEIVQEELKQAQKNAESLVEEATKQLEIQKEQALKSL 138 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999