HHsearch alignment for GI: 254781085 and conserved domain: CHL00118

>CHL00118 atpG ATP synthase CF0 B' subunit; Validated.
Probab=98.10  E-value=0.0006  Score=41.50  Aligned_cols=113  Identities=13%  Similarity=0.144  Sum_probs=76.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999962288999999999999999999999999999999999999999999999999999999999999999
Q gi|254781085|r   12 SLIIFLVIVVYLRIPSILLSFLDAHADKIRDDIFEARRLREKSENILMQYKEKHSKVEEETREIILAAKHRAKILAEEGC   91 (173)
Q Consensus        12 ~f~il~~il~~~~~~~~i~~~l~~R~~~I~~~l~~A~~~~~~a~~~~~~~~~~l~~a~~ea~~i~~~a~~~a~~~~e~~~   91 (173)
T Consensus        26 ~~q~i~FliL~~lL~kf~~~-------Pi~~~ld~R~~~I~~~l~~Ae~~~~ea~~~~~eye~~L~~Ar~Ea~~ii~~A~   98 (156)
T CHL00118         26 PLMALQFLLLMVLLNAIFYK-------PIGKILDEREEYIRSNLAKASSKLAKANELTAQYEEQLSKARKEAQLLIAQSQ   98 (156)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999898-------99999999999999889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999999999999999999999999999
Q gi|254781085|r   92 QNIEQISALYLKDLEQKIHYMKLEAKRLLYAKIADFSVEI  131 (173)
Q Consensus        92 ~~a~~~~~~~~~~a~~~I~~~~~~a~~~l~~~~~~la~~~  131 (173)
T Consensus        99 ~~a~~~~~~i~~~A~~ea~~~i~~A~~eIe~ek~~a~~el  138 (156)
T CHL00118         99 KEAQEIVQEELKQAQKNAESLVEEATKQLEIQKEQALKSL  138 (156)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999999999999999999999999