HHsearch alignment for GI: 254781085 and conserved domain: COG0711
>COG0711 AtpF F0F1-type ATP synthase, subunit b [Energy production and conversion].
Probab=99.96 E-value=2.6e-27 Score=177.00 Aligned_cols=157 Identities=26% Similarity=0.411 Sum_probs=149.8
Q ss_pred CCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 997989--999999999999999996228899999999999999999999999999999999999999999999999999
Q gi|254781085|r 1 MHFDET--FLVFMSLIIFLVIVVYLRIPSILLSFLDAHADKIRDDIFEARRLREKSENILMQYKEKHSKVEEETREIILA 78 (173)
Q Consensus 1 m~~d~t--fw~~i~f~il~~il~~~~~~~~i~~~l~~R~~~I~~~l~~A~~~~~~a~~~~~~~~~~l~~a~~ea~~i~~~ 78 (173)
T Consensus 2 ~~~~~~~~~~~~i~F~ill~ll~~~-~~~pi~~~l~~R~~~I~~~l~~A~~~~~ea~~~~~~~~~~l~~Ar~~a~~Ii~~ 80 (161)
T COG0711 2 MNFNDTNILWQLIAFVILLWLLKKF-VWKPILKALDERQAKIADDLAEAERLKEEAQALLAEYEQELEEAREQASEIIEQ 80 (161)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7521247999999999999999999-686799999999999998899999989999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999999999433999999999999999999
Q gi|254781085|r 79 AKHRAKILAEEGCQNIEQISALYLKDLEQKIHYMKLEAKRLLYAKIADFSVEIVREIISQKMNDDVNSSIFEKTISSIQS 158 (173)
Q Consensus 79 a~~~a~~~~e~~~~~a~~~~~~~~~~a~~~I~~~~~~a~~~l~~~~~~la~~~~~kil~~~l~~~~~~~~I~~~i~~l~~ 158 (173)
T Consensus 81 A~~~a~~~~~e~~~~a~~e~~r~~~~a~~~I~~e~~~a~~~l~~~~~~la~~~aekll~~~~~~~~~~~lid~~~~~l~~ 160 (161)
T COG0711 81 AKKEAEQIAEEIKAEAEEELERIKEAAEAEIEAEKERALEELRAEVAELAVAIAEKLLGKKVDEAAQKDLIDAFIAELGE 160 (161)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999998999999999999999999999999999999999999999999999999989875789899999999986334