HHsearch alignment for GI: 254781085 and conserved domain: PRK06937
>PRK06937 type III secretion system protein; Reviewed.
Probab=97.55 E-value=0.0052 Score=36.07 Aligned_cols=105 Identities=12% Similarity=0.082 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q gi|254781085|r 55 ENILMQYKEKHSKVEEETREIILAAKHRAKILAEEGCQNIEQISALYLKDLEQKIHYMKLEAKRLLYAKIADFSVEIVRE 134 (173)
Q Consensus 55 ~~~~~~~~~~l~~a~~ea~~i~~~a~~~a~~~~e~~~~~a~~~~~~~~~~a~~~I~~~~~~a~~~l~~~~~~la~~~~~k 134 (173)
T Consensus 26 ~~~~~~A~~ile~A~~~A~~i~~~A~~~~e~~~~~Gy~eG~~ea~~e~ae~i~~~~~~~~~~~~~le~~l~~lv~~av~k 105 (204)
T PRK06937 26 YQSLLSAEELVEAARQRAAEIEAEAREVYEQQKQLGYEAGLDEARTEQAELILETVLQCQEFYRGIEQQMSEVVLEAVRK 105 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99984399999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9994339999999999999999999
Q gi|254781085|r 135 IISQKMNDDVNSSIFEKTISSIQSC 159 (173)
Q Consensus 135 il~~~l~~~~~~~~I~~~i~~l~~~ 159 (173)
T Consensus 106 Ilg~~d~~el~~~~v~~al~~v~~~ 130 (204)
T PRK06937 106 ILNDYDDVERTLQVVREALALVSNQ 130 (204)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 8654683899999999999997359