HHsearch alignment for GI: 254781085 and conserved domain: PRK08476
>PRK08476 F0F1 ATP synthase subunit B'; Validated.
Probab=99.94 E-value=6.5e-25 Score=163.15 Aligned_cols=136 Identities=21% Similarity=0.276 Sum_probs=128.4
Q ss_pred CCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 997989----9999999999999999962288999999999999999999999999999999999999999999999999
Q gi|254781085|r 1 MHFDET----FLVFMSLIIFLVIVVYLRIPSILLSFLDAHADKIRDDIFEARRLREKSENILMQYKEKHSKVEEETREII 76 (173)
Q Consensus 1 m~~d~t----fw~~i~f~il~~il~~~~~~~~i~~~l~~R~~~I~~~l~~A~~~~~~a~~~~~~~~~~l~~a~~ea~~i~ 76 (173)
T Consensus 1 ~ml~~n~~~~i~~~i~FliL~~iL-~kflykPi~k~ld~R~~~I~~~l~~A~~~~~ea~~l~~e~e~~L~~Ar~ea~~ii 79 (141)
T PRK08476 1 MMLDINPYLMLLTFVVFLLLIVIL-NSWLYKPLLKFMDNRNASIKNDLEKVKTNSSESVEINAEIEAILKNAREEANKIR 79 (141)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 965776779999999999999999-9995878999999999999988999999899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999999999999999999999999999999999
Q gi|254781085|r 77 LAAKHRAKILAEEGCQNIEQISALYLKDLEQKIHYMKLEAKRLLYAKIADFSVEIVREIIS 137 (173)
Q Consensus 77 ~~a~~~a~~~~e~~~~~a~~~~~~~~~~a~~~I~~~~~~a~~~l~~~~~~la~~~~~kil~ 137 (173)
T Consensus 80 ~~A~~~A~~~~~~~~~~Ar~eae~~~~~a~~~ie~ek~~a~~~L~~qv~~Ls~~ia~Ki~~ 140 (141)
T PRK08476 80 QEAIAAAKEEAEQKIEAKKEELESKYEAFAQQLANQKQELKEQLLSQMPEFKEALNAKLSK 140 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999999999999999999999999999999999998899999999986735