HHsearch alignment for GI: 254781085 and conserved domain: PRK11677

>PRK11677 cytochrome d ubiquinol oxidase subunit III; Provisional.
Probab=91.48  E-value=0.89  Score=23.09  Aligned_cols=84  Identities=7%  Similarity=0.030  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999622889999999999999999999999999999999999999999999999999999999999
Q gi|254781085|r    7 FLVFMSLIIFLVIVVYLRIPSILLSFLDAHADKIRDDIFEARRLREKSENILMQYKEKHSKVEEETREIILAAKHRAKIL   86 (173)
Q Consensus         7 fw~~i~f~il~~il~~~~~~~~i~~~l~~R~~~I~~~l~~A~~~~~~a~~~~~~~~~~l~~a~~ea~~i~~~a~~~a~~~   86 (173)
T Consensus         2 ~W~~ali~lvvGiiIG~~~~R~~~~~-~~~q~~Le~eLe-------~~k~el~~Yr~ev~~HF~~tA~Ll~~l~~~Y~~l   73 (134)
T PRK11677          2 TWEYALIGLVVGIIIGAVAMRFGNRK-LRQQQALQYELE-------KNKAELEEYRQELVDHFARSAELLDTMAKDYRQL   73 (134)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             28999999999999999999981751-167999999999-------9999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254781085|r   87 AEEGCQNIEQIS   98 (173)
Q Consensus        87 ~e~~~~~a~~~~   98 (173)
T Consensus        74 yqHlA~~a~~Ll   85 (134)
T PRK11677         74 YQHMAKSSSELL   85 (134)
T ss_pred             HHHHHHHHHHHC
T ss_conf             999998899876