HHsearch alignment for GI: 254781085 and conserved domain: PRK13455
>PRK13455 F0F1 ATP synthase subunit B; Provisional.
Probab=97.84 E-value=0.0019 Score=38.65 Aligned_cols=151 Identities=10% Similarity=0.106 Sum_probs=90.1
Q ss_pred HHHHHH--HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 899999--999999--9999999622889999999999999999999999999999999999999999999999999999
Q gi|254781085|r 5 ETFLVF--MSLIIF--LVIVVYLRIPSILLSFLDAHADKIRDDIFEARRLREKSENILMQYKEKHSKVEEETREIILAAK 80 (173)
Q Consensus 5 ~tfw~~--i~f~il--~~il~~~~~~~~i~~~l~~R~~~I~~~l~~A~~~~~~a~~~~~~~~~~l~~a~~ea~~i~~~a~ 80 (173)
T Consensus 20 ~~~~~~~d~~FWv~IsFvif~~iL~~~~vp~~I~---~~LD~R~~~I~~dLdeAe~lreEAe~lLaey----e~~l~~A~ 92 (184)
T PRK13455 20 GPFFSLSNTDFIVTLAFLLFIGILVYFKVPGMIG---GMLDKRAEGIRSELEEARALREEAQTLLASY----ERKQREVQ 92 (184)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH
T ss_conf 9988888954999999999999999995589999---9999999999999999999999999999999----99999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999999943399999999999999999999
Q gi|254781085|r 81 HRAKILAEEGCQNIEQISALYLKDLEQKIHYMKLEAKRLLYAKIADFSVEIVREIISQKMNDDVNSSIFEKTISSIQSCH 160 (173)
Q Consensus 81 ~~a~~~~e~~~~~a~~~~~~~~~~a~~~I~~~~~~a~~~l~~~~~~la~~~~~kil~~~l~~~~~~~~I~~~i~~l~~~~ 160 (173)
T Consensus 93 ~EA~~Ii~~Ak~~A~~~~~~~~~~a~~~i~r~~~~Ae~~I~~~k~~A~~eir~~a~~lAi~--aA~kii~~~l~~~~~~~ 170 (184)
T PRK13455 93 EQADRIVANARDEAQAAAEQAKADLEASIARRLAAAEDQIASAEAAAVRAVRDRAISVAVA--AAADVIAKQMTAAEANA 170 (184)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHH
T ss_conf 9999999999999999999999999999999999999999999999998888999999999--99999986579998999
Q ss_pred HHHH
Q ss_conf 9974
Q gi|254781085|r 161 QMDK 164 (173)
Q Consensus 161 k~~~ 164 (173)
T Consensus 171 LId~ 174 (184)
T PRK13455 171 LIDE 174 (184)
T ss_pred HHHH
T ss_conf 9999