HHsearch alignment for GI: 254781085 and conserved domain: pfam04612
>pfam04612 GspM General secretion pathway, M protein. This is a family of membrane proteins involved in the secretion of a number of molecules in Gram-negative bacteria. The precise function of these proteins is unknown, though in Vibrio cholerae, the EpsM protein interacts with the EpsL protein, and also forms homodimers.
Probab=92.55 E-value=0.67 Score=23.82 Aligned_cols=50 Identities=14% Similarity=0.143 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999962288999999999999999999999999999999
Q gi|254781085|r 9 VFMSLIIFLVIVVYLRIPSILLSFLDAHADKIRDDIFEARRLREKSENIL 58 (173)
Q Consensus 9 ~~i~f~il~~il~~~~~~~~i~~~l~~R~~~I~~~l~~A~~~~~~a~~~~ 58 (173)
T Consensus 19 l~~~~~~l~~~l~y~~lw~Pl~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 68 (159)
T pfam04612 19 LAVLGAVLLLVLLYLGLWQPLSQRRARAQRRLQAARQLLAWLQEQAPEIR 68 (159)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999988999999999999999999999999999999