HHsearch results for GI: 254781085 and protein with PDBid: 2cly_A

>2cly_A ATP synthase B chain, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus} SCOP: f.52.1.1 PDB: 2wss_T*
Probab=99.84  E-value=4.4e-20  Score=133.82  Aligned_cols=155  Identities=10%  Similarity=0.058  Sum_probs=142.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             97989999999999999999996228899999999999999999999999999999999999999999999999999999
Q gi|254781085|r    2 HFDETFLVFMSLIIFLVIVVYLRIPSILLSFLDAHADKIRDDIFEARRLREKSENILMQYKEKHSKVEEETREIILAAKH   81 (173)
Q Consensus         2 ~~d~tfw~~i~f~il~~il~~~~~~~~i~~~l~~R~~~I~~~l~~A~~~~~~a~~~~~~~~~~l~~a~~ea~~i~~~a~~   81 (173)
                      -+|+.||++++|++|+++++++ +|+||.++||+|.+.|.+++++|+..+.++.+...++++++..+..++..++..+++
T Consensus        52 v~~~ef~~~lsflif~~~~~k~-~g~~i~~~Ld~r~~~I~~~l~ea~~~~~ea~~~~~e~ekkl~~~~~~~~~i~~~ake  130 (214)
T 2cly_A           52 VITPETFSAISTIGFLVYIVKK-YGASVGEFADKLNEQKIAQLEEVKQASIKQIQDAIDMEKSQQALVQKRHYLFDVQRN  130 (214)
T ss_dssp             ----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGHHHHHHHHH
T ss_pred             EECHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8874999999999999999999-889999999998888998999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999999999999999999999999999433999999999999999999999
Q gi|254781085|r   82 RAKILAEEGCQNIEQISALYLKDLEQKIHYMKLEAKRLLYAKIADFSVEIVREIISQKMNDDVNSSIFEKTISSIQSCHQ  161 (173)
Q Consensus        82 ~a~~~~e~~~~~a~~~~~~~~~~a~~~I~~~~~~a~~~l~~~~~~la~~~~~kil~~~l~~~~~~~~I~~~i~~l~~~~k  161 (173)
                      .+....+....++...+......+...+....+.+++.++.++++.++..+.    ..++++.++.+|+++|.+|+..-+
T Consensus       131 ~~~~~~e~~~~e~~~~v~~~~k~~ld~~~~~e~~~~~~~q~~~v~~~~~~V~----k~i~~~~~k~~i~~~I~~Lk~La~  206 (214)
T 2cly_A          131 NIAMALEVTYRERLHRVYREVKNRLDYHISVQNMMRQKEQEHMINWVEKRVV----QSISAQQEKETIAKCIADLKLLSK  206 (214)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----C-----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999999999999999999999999999999999999----876989899999999999998998